View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5689_high_44 (Length: 311)

Name: NF5689_high_44
Description: NF5689
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5689_high_44
NF5689_high_44
[»] chr7 (1 HSPs)
chr7 (1-311)||(35572120-35572430)


Alignment Details
Target: chr7 (Bit Score: 299; Significance: 1e-168; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 1 - 311
Target Start/End: Original strand, 35572120 - 35572430
Alignment:
Q  1 atatacctaagataattagatgtatattcaggaaagaatacataattggggtatgtagcctgccaagtgattatgaaacaaaatttaggatctataataa 100  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35572120 atatacctaagataattagatgtatattcaggaaagaatatttaattggggtatgtagcctgccaagtgattatgaaacaaaatttaggatctataataa 35572219  T
Q  101 gaaataattaattaaacttggattgaagctagcgcatggacacaaattgatatactaattaaattttggtctctcgttggaattagaggagagccatatc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35572220 gaaataattaattaaacttggattgaagctagcgcatggacacaaattgatatactaattaaattttggtctctcgttggaattagaggagagccatatc 35572319  T
Q  201 tacaacttgacttagctgtattcaaagttggaatttaaaattttaaaaattggaattgaaaacttagggagctcatcccatttacgactgattaaactaa 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35572320 tacaacttgacttagctgtattcaaagttggaatttaaaattttaaaaattggaattgaaaacttagggagctcatcccatttacgactgattaaactaa 35572419  T
Q  301 gcgtagttgtt 311  Q
    | |||||||||    
T  35572420 gtgtagttgtt 35572430  T

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