View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5689_high_58 (Length: 249)
Name: NF5689_high_58
Description: NF5689
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5689_high_58 |
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Alignment Details
Target: chr1 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 36676924 - 36677165
Alignment:
| Q |
1 |
agggaaagtggaagatgatgatgaataaaatgttaagtatttttgggcttataaaggccttgttcaaggatacaacaatggacagtgatttttgcacgtg |
100 |
Q |
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| T |
36676924 |
agggaaagtggaagatgatgatgaataaaatgttaagtatttttgggcttataaaggccttgttcaaggatataacaatggacagtgatttttgcacgtg |
36677023 |
T |
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| Q |
101 |
aaattccattaaatgtatatagatcattaactttacacggttaattgaatgatggttgttagataaaatcaaagcaattttagtcaatatcactctatta |
200 |
Q |
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| T |
36677024 |
aaattccattaaatgtatatagatcattaactttacacggttaattgaatgatggttgttagataaaatcaaagcaattttagtcaatatcactctatta |
36677123 |
T |
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| Q |
201 |
ttttattttagcatatgcggtcctttgagtttgattcatttc |
242 |
Q |
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| T |
36677124 |
ttttattttagcatatgcggtcctttaagtttgattcatttc |
36677165 |
T |
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