View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5689_high_68 (Length: 237)
Name: NF5689_high_68
Description: NF5689
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5689_high_68 |
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Alignment Details
Target: chr7 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 35572515 - 35572738
Alignment:
| Q |
1 |
attactatttttgtttttaattgtcaagtagctatgattccacagctcaccgtcatatgtgatgctaagattaaattaacaccattgaatttgttggtgc |
100 |
Q |
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| T |
35572515 |
attactatttttgtttttaattgtcaagtagctatgactccacagctcaccgtcatatgtgatgctaagattaaattaacaccattgaatttgttggtgc |
35572614 |
T |
|
| Q |
101 |
taatatagt---aattaaaaatagttataagtacgtaatttaccaaataaggtatagatatatactgagcttaattgtcatagattcgatcatctaatgg |
197 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |
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| T |
35572615 |
taatatagtagtaattaaaaatagttataagtacgtaatttaccaaataaggtatagatacatacttagcttaattgtcatagattcgatcatctaatgg |
35572714 |
T |
|
| Q |
198 |
tttaaggtagcggtattgcaattt |
221 |
Q |
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|||||||||||||||||||||||| |
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| T |
35572715 |
tttaaggtagcggtattgcaattt |
35572738 |
T |
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