View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5689_low_14 (Length: 446)
Name: NF5689_low_14
Description: NF5689
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5689_low_14 |
 | |
|
| [»] scaffold0295 (1 HSPs) |
| | |
|
| [»] scaffold0020 (2 HSPs) |
| | |
|
Alignment Details
Target: chr1 (Bit Score: 426; Significance: 0; HSPs: 7)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 426; E-Value: 0
Query Start/End: Original strand, 1 - 430
Target Start/End: Complemental strand, 51457859 - 51457430
Alignment:
| Q |
1 |
agagattctggaaaaacatgccagaaatataaaaaggttttgaagcatactgcatcagacacatcacaatggagcttagtcacagaatcaccacgtccga |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
51457859 |
agagattctggaaaaacatgccagaaatataaaaaggttttgaagcatactgcatcagacacatcacaatggagcttagtcacagaatcaccgcgtccga |
51457760 |
T |
|
| Q |
101 |
gattctgagcaaatccataagcaatatatgttcttggccccatgtcaggctttacacaataatccggcaacttcacagcaaggttgagagaaccactaaa |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
51457759 |
gattctgagcaaatccataagcaatatatgttcttggccccatgtcaggctttacacaataatccggcaacttcacagcaaggttgagagaaccactaaa |
51457660 |
T |
|
| Q |
201 |
aggatttgtgtattctttataaggcaaggaagatatgaactcagcatgatgacgaggtaaaagttcctgaaataaatcagaaggaggccaatctttcaat |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
51457659 |
aggatttgtgtattctttataaggcaaggaagatatgaactcagcatgatgacgaggtaaaagttcctgaaataaatcagaaggaggccaatctttcaat |
51457560 |
T |
|
| Q |
301 |
ttcaacacctcaggccatttaagccaatcgctgcgaccatttgtgtacccagtgaagaattggtggatattaatatctccctgcattcaatgaacaactc |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
51457559 |
ttcaacacctcaggccatttaagccaatcgctgcgaccatttgtgtacccagtgaagaattggtggatattaatatctccctgcattcaatgaacaactc |
51457460 |
T |
|
| Q |
401 |
aaataaaaatgcagaaattaccagcaacag |
430 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
51457459 |
aaataaaaatgcagaaattaccagcaacag |
51457430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 40 - 421
Target Start/End: Complemental strand, 51482464 - 51482082
Alignment:
| Q |
40 |
ttgaagcatactgcatcagacacatcacaatggagcttagtcacagaatcaccacgtccgagattctgagcaaatccataagcaatatatgttcttggcc |
139 |
Q |
| |
|
||||| |||||||||||||||| || ||| ||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||| |||| | |
|
|
| T |
51482464 |
ttgaatcatactgcatcagacatattacagtggagcttagtcacagaatcaccacgtccaagctcctgagcaaatccataagcaatatatgtttttgggc |
51482365 |
T |
|
| Q |
140 |
ccatgtcaggctttacacaataatccggcaacttcacagcaaggttgagagaaccactaaaaggatttgtgtattctttataaggcaaggaagatatgaa |
239 |
Q |
| |
|
||||||| ||||||| | || || |||||||||||||||||||| ||| || | ||||||| ||| ||||||||||| ||||||||||||||||| |
|
|
| T |
51482364 |
ccatgtctggctttagaacattttcaggcaacttcacagcaaggttaagaatgcctttgaaaggatctgtatattctttatacggcaaggaagatatgaa |
51482265 |
T |
|
| Q |
240 |
ctcagcatgatgacgaggtaaaagttcctgaaataaatcagaaggaggccaatctttcaatttcaacacctcaggccatttaagccaatcgctgcgacca |
339 |
Q |
| |
|
||||||| ||||||||| ||| |||| |||||||| ||||||||||||||||||||||||||| |||| |||||| ||||||||||| ||||||| |
|
|
| T |
51482264 |
ctcagcacaatgacgaggcaaactttccctaaataaattagaaggaggccaatctttcaatttcaaaacctgaggccaattaagccaatctgggcgacca |
51482165 |
T |
|
| Q |
340 |
tttgtgtacccagtgaagaattggtggatattaatatctccctgcattcaatgaacaactcaaataaaaa-tgcagaaattac |
421 |
Q |
| |
|
|||||||||||||| ||||||||||| | |||||||| |||||||||||| | ||||||||||||||||| |||||||||||| |
|
|
| T |
51482164 |
tttgtgtacccagtaaagaattggtgcacattaatatttccctgcattcattcaacaactcaaataaaaattgcagaaattac |
51482082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 40 - 430
Target Start/End: Complemental strand, 51499165 - 51498774
Alignment:
| Q |
40 |
ttgaagcatactgcatcagacacatcacaatggagcttagtcacagaatcaccacgtccgagattctgagcaaatccataagcaatatatgttcttggcc |
139 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| |||||||||||||||||||| || || || | |||| ||||||||||||||||||||||| |||| | |
|
|
| T |
51499165 |
ttgaagcatactgcatcagacatatcacaatgaagcttagtcacagaatcaccccgcccaagttcctgatcaaatccataagcaatatatgtttttggtc |
51499066 |
T |
|
| Q |
140 |
ccatgtcaggctttacacaataatccggcaacttcacagcaaggttgagagaaccactaaaaggatttgtgtattctttataaggcaaggaagatatgaa |
239 |
Q |
| |
|
|||| || ||||||| | || || |||||||| ||||||||||| ||| ||| | ||||||| ||| ||||||||||| ||||||||||||||||| |
|
|
| T |
51499065 |
ccatatctggctttagaacattttcaggcaactttacagcaaggttaagaacacctttgaaaggatctgtatattctttatacggcaaggaagatatgaa |
51498966 |
T |
|
| Q |
240 |
ctcagcatgatgacgaggtaaaagttcctgaaataaatcagaaggaggccaatctttcaatttcaacacctcaggccatttaagccaatcgctgcgacca |
339 |
Q |
| |
|
||||||| ||||||||| ||| ||| | |||||| | ||||||||||||||||||||||||||| |||| |||||| ||||||||||| |||||| |
|
|
| T |
51498965 |
ctcagcacaatgacgaggcaaactttcttcaaataagttagaaggaggccaatctttcaatttcaaaacctgaggccaattaagccaatcagggcgacct |
51498866 |
T |
|
| Q |
340 |
tttgtgtacccagtgaagaattggtggatattaatatctccctgcattcaatgaacaactcaaataaaaa-tgcagaaattaccagcaacag |
430 |
Q |
| |
|
|||||||||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| ||||||| |||||||||||| ||||||| |
|
|
| T |
51498865 |
tttgtgtacccagtaaagaattggtgcacattaatatctccctgcattcaatcaacaactcagataaaaattgcagaaattacaggcaacag |
51498774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 40 - 430
Target Start/End: Original strand, 30205003 - 30205394
Alignment:
| Q |
40 |
ttgaagcatactgcatcagacacatcacaatggagcttagtcacagaatcaccacgtccgagattctgagcaaatccataagcaatatatgttcttggcc |
139 |
Q |
| |
|
||||||||||||||||| |||| |||||||||||||||||||||||||||||| || || || | |||||||||||||||||||||||||||| |||| | |
|
|
| T |
30205003 |
ttgaagcatactgcatctgacatatcacaatggagcttagtcacagaatcaccccgcccaagctcctgagcaaatccataagcaatatatgtttttgggc |
30205102 |
T |
|
| Q |
140 |
ccatgtcaggctttacacaataatccggcaacttcacagcaaggttgagagaaccactaaaaggatttgtgtattctttataaggcaaggaagatatgaa |
239 |
Q |
| |
|
||||||| |||| || | || | ||||||||| |||||||||| ||| |||| | ||||||| ||| |||||||| | ||||||||||||||||| |
|
|
| T |
30205103 |
ccatgtctggctgtaaaacatctttaggcaacttcgcagcaaggtttagaacaccattgaaaggatctgtatattctttgaacggcaaggaagatatgaa |
30205202 |
T |
|
| Q |
240 |
ctcagcatgatgacgaggtaaaagttcctgaaataaatcagaaggaggccaatctttcaatttcaacacctcaggccatttaagccaatcgctgcgacca |
339 |
Q |
| |
|
||||||| |||||| || ||| ||||| |||||||| |||||||||||||||||||| |||||| |||| |||||| |||||||| || | |||| |
|
|
| T |
30205203 |
ctcagcacaatgacggggcaaactttcctcaaataaattagaaggaggccaatctttcagtttcaaaaccttaggccaattaagccagtccaggagaccc |
30205302 |
T |
|
| Q |
340 |
tttgtgtacccagtgaagaattggtggatattaatatctccctgcattcaatgaacaactcaaataaaaa-tgcagaaattaccagcaacag |
430 |
Q |
| |
|
|||||||||||||| ||||||| ||| | ||||||||||||||||||||||| |||| |||| ||||||| |||||||||||| ||||||| |
|
|
| T |
30205303 |
tttgtgtacccagtaaagaatttgtgcaaattaatatctccctgcattcaatcaacacctcagataaaaattgcagaaattactggcaacag |
30205394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 40 - 190
Target Start/End: Complemental strand, 51440310 - 51440159
Alignment:
| Q |
40 |
ttgaagcatactgcatcagacacatcacaatggagcttagtcacagaatca-ccacgtccgagattctgagcaaatccataagcaa-tatatgttcttgg |
137 |
Q |
| |
|
||||||| |||||||||| |||||||| ||||||||||||||||| ||||| ||| ||| | | || ||| |||||||||| || || ||||| ||| |
|
|
| T |
51440310 |
ttgaagcttactgcatcacacacatcaaaatggagcttagtcacataatcaaccatgtcacaactcctaagctaatccataagaaaatacatgtttttga |
51440211 |
T |
|
| Q |
138 |
ccccatgtcaggctttacacaataatccggcaacttcacagcaaggttgagag |
190 |
Q |
| |
|
||| |||| |||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
51440210 |
cccg-tgtctggctttacacaataatccggcaacttcatagcaaggttgagag |
51440159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 346 - 430
Target Start/End: Complemental strand, 51440068 - 51439982
Alignment:
| Q |
346 |
tacccagtgaagaattggtggatatt--aatatctccctgcattcaatgaacaactcaaataaaaatgcagaaattaccagcaacag |
430 |
Q |
| |
|
|||||||| || |||||||||||||| |||| ||||||| |||||| |||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
51440068 |
tacccagtaaataattggtggatattttaataattccctgcgttcaatcaacaactccaataaaaatgcagaaattaccagcaacag |
51439982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 260 - 329
Target Start/End: Complemental strand, 51440140 - 51440071
Alignment:
| Q |
260 |
aaagttcctgaaataaatcagaaggaggccaatctttcaatttcaacacctcaggccatttaagccaatc |
329 |
Q |
| |
|
||||||||||| |||||||| ||| ||||||||||||||| |||||||| |||||| ||||||| ||| |
|
|
| T |
51440140 |
aaagttcctgacataaatcaaaagaaggccaatctttcaaattcaacacgcaaggccaattaagccgatc |
51440071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 273; Significance: 1e-152; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 31 - 430
Target Start/End: Complemental strand, 43162153 - 43161747
Alignment:
| Q |
31 |
aaaaaggttttgaagcatactgcatcagacacatcacaatggagcttagtcacagaatcaccacgtccgagattctgagcaaatccataagcaatatatg |
130 |
Q |
| |
|
|||||||||| |||||||||||||||| |||||| |||||||||||||||||| ||||| || ||||| |||| ||||| |||||||||||||||||||| |
|
|
| T |
43162153 |
aaaaaggtttcgaagcatactgcatcaaacacattacaatggagcttagtcacggaatccccgcgtccaagatcctgaggaaatccataagcaatatatg |
43162054 |
T |
|
| Q |
131 |
ttcttggccccatgtcaggctttacacaataatccggcaacttcacagcaaggttgagagaaccactaaaaggatttgtgtattctttataaggcaagga |
230 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |
|
|
| T |
43162053 |
ttcttggccccatgtcaggctttacacaataatccggcaacttcacagcaaggttgagagaaccactaaatggatttgtatattctttataaggcaagga |
43161954 |
T |
|
| Q |
231 |
agatatgaactcagcatgatgacgaggtaaaagttcctgaaataaatcagaaggaggccaatctttcaatttcaacacctcaggccatttaagccaatc- |
329 |
Q |
| |
|
|| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || |
|
|
| T |
43161953 |
agttatgaactcagcatgatgacgaggtaaacgttcctgaaataaatcagaaggaggccaatctttcaatttcaacacctcaggccaattaagccagtcc |
43161854 |
T |
|
| Q |
330 |
------gctgcgaccatttgtgtacccagtgaagaattggtggatattaatatctccctgcattcaatgaacaactcaaataaaaatgcagaaattacca |
423 |
Q |
| |
|
| ||||||| ||||||| |||||||||||| ||||||||||||| |||| ||||||||||||||||||| |||||||||| ||||||||| | |
|
|
| T |
43161853 |
ttgcgagttgcgaccccttgtgtaaccagtgaagaatcggtggatattaatgtctctctgcattcaatgaacaactaaaataaaaataaagaaattacta |
43161754 |
T |
|
| Q |
424 |
gcaacag |
430 |
Q |
| |
|
|| |||| |
|
|
| T |
43161753 |
gccacag |
43161747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 43 - 407
Target Start/End: Complemental strand, 27397805 - 27397441
Alignment:
| Q |
43 |
aagcatactgcatcagacacatcacaatggagcttagtcacagaatcaccacgtccgagattctgagcaaatccataagcaatatatgttcttggcccca |
142 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| ||||||| |||||||| ||||| || | |||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
27397805 |
aagcatactgcatcagacatatcacaatggagcctagtcactgaatcaccccgtccaagctcctgagcaaatccataagcaatatatgtttttggtccca |
27397706 |
T |
|
| Q |
143 |
tgtcaggctttacacaataatccggcaacttcacagcaaggttgagagaaccactaaaaggatttgtgtattctttataaggcaaggaagatatgaactc |
242 |
Q |
| |
|
|||| ||||||| | | ||| |||| |||||||||||||||||||| ||| | ||||||||||| ||||||||| | |||||||||||||||||||| |
|
|
| T |
27397705 |
tgtctggctttagaacttcatcaggcagcttcacagcaaggttgagagcacctttgaaaggatttgtatattctttaaatggcaaggaagatatgaactc |
27397606 |
T |
|
| Q |
243 |
agcatgatgacgaggtaaaagttcctgaaataaatcagaaggaggccaatctttcaatttcaacacctcaggccatttaagccaatcgctgcgaccattt |
342 |
Q |
| |
|
||| |||||| |||||| ||| | ||||| | ||||||||||||||||||||||||||| || | |||||| | | | ||| || ||| |||| |
|
|
| T |
27397605 |
cgcacaatgacgcggtaaactttcttcaaatagtttagaaggaggccaatctttcaatttcaatacttgaggccaatcatgtttatccttgggacaattt |
27397506 |
T |
|
| Q |
343 |
gtgtacccagtgaagaattggtggatattaatatctccctgcattcaatgaacaactcaaataaa |
407 |
Q |
| |
|
||||||||||| ||||||||||| | |||||||||| |||||| || || |||||||||||| |
|
|
| T |
27397505 |
gtgtacccagtaaagaattggtgcacattaatatctatctgcatcggatcaaaaactcaaataaa |
27397441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 40 - 429
Target Start/End: Original strand, 20867541 - 20867918
Alignment:
| Q |
40 |
ttgaagcatactgcatcagacacatcacaatggagcttagtcacagaatcaccacgtccgagattctgagcaaatccataagcaatatatgttcttggcc |
139 |
Q |
| |
|
||||| |||||| ||||||||| ||||||||| |||||||||||||||||||| || || || | |||| |||||||||||||||||||||| |||| | |
|
|
| T |
20867541 |
ttgaaacatactacatcagacatatcacaatgtagcttagtcacagaatcaccccgcccaagctcctgatgaaatccataagcaatatatgtttttggtc |
20867640 |
T |
|
| Q |
140 |
ccatgtcaggctttacacaataatccggcaacttcacagcaaggttgagagaaccactaaaaggatttgtgtattctttataaggcaaggaagatatgaa |
239 |
Q |
| |
|
||| || | || || ||| |||| |||| |||||||||| ||| || | ||||||| ||| ||||||||||| |||||||| |||||||| |
|
|
| T |
20867641 |
ccacgtga------ac---attatcaggcagcttcgcagcaaggttaagatcccctttgaaaggatctgtatattctttatatggcaaggaggatatgaa |
20867731 |
T |
|
| Q |
240 |
ctcagcatgatgacgaggtaaaagttcctgaaataaatcagaaggaggccaatctttcaatttcaacacctcaggccatttaagccaatcgctgcgacca |
339 |
Q |
| |
|
|| | ||| ||||| ||| || || ||||||| ||||||||| ||| ||||||||||| | || |||||| | |||| ||| |||||||| |
|
|
| T |
20867732 |
cttggtgcaatggcgaggcaaatttttctcgaataaat---aaggaggccgatcattcaatttcaatagctgaggccaatcaagcttatccttgcgacca |
20867828 |
T |
|
| Q |
340 |
tttgtgtacccagtgaagaattggtggatattaatatctccctgcattcaatgaacaactcaaataaaaatgcagaaattaccagcaaca |
429 |
Q |
| |
|
||||| |||||||| ||||| | | | |||||||||||||||||| ||| ||||| |||||||||||| |||||||| |||||||| |
|
|
| T |
20867829 |
tttgtatacccagtaaagaaatcatccactttaatatctccctgcattgaatcaacaagtcaaataaaaatttagaaattatcagcaaca |
20867918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0295 (Bit Score: 100; Significance: 3e-49; HSPs: 1)
Name: scaffold0295
Description:
Target: scaffold0295; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 40 - 307
Target Start/End: Original strand, 6791 - 7058
Alignment:
| Q |
40 |
ttgaagcatactgcatcagacacatcacaatggagcttagtcacagaatcaccacgtccgagattctgagcaaatccataagcaatatatgttcttggcc |
139 |
Q |
| |
|
||||||||||||||||| |||| || ||||||||||| ||||||||||||||| ||| || | || |||||||||||||||||| |||| | |||||| |
|
|
| T |
6791 |
ttgaagcatactgcatccgacatgtcgcaatggagctttgtcacagaatcaccaaatccaagctccttagcaaatccataagcaatgtatgcttttggcc |
6890 |
T |
|
| Q |
140 |
ccatgtcaggctttacacaataatccggcaacttcacagcaaggttgagagaaccactaaaaggatttgtgtattctttataaggcaaggaagatatgaa |
239 |
Q |
| |
|
||||||| ||||||| ||| ||| || |||||||| |||||||| | ||||||||| | ||||| ||||||||||||||| |||||| |||||| ||| |
|
|
| T |
6891 |
ccatgtctggctttagccaaccatcaggaaacttcacggcaaggttaatagaaccacttacaggatgtgtgtattctttatacggcaagtaagatacgaa |
6990 |
T |
|
| Q |
240 |
ctcagcatgatgacgaggtaaaagttcctgaaataaatcagaaggaggccaatctttcaatttcaaca |
307 |
Q |
| |
|
||| || |||| ||||||| ||||| |||| | ||||||||||||||||||||||| ||||||| |
|
|
| T |
6991 |
ctcctcaaaatgattaggtaaacattccttaaatgattcagaaggaggccaatctttcaacttcaaca |
7058 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 42 - 146
Target Start/End: Complemental strand, 4299727 - 4299623
Alignment:
| Q |
42 |
gaagcatactgcatcagacacatcacaatggagcttagtcacagaatcaccacgtccgagattctgagcaaatccataagcaatatatgttcttggcccc |
141 |
Q |
| |
|
|||||||||||||| ||||| |||||||| ||||||||| ||||||||||| | || || | ||||| |||||||||||||||||||||| |||| ||| |
|
|
| T |
4299727 |
gaagcatactgcatgagacatatcacaatagagcttagtgacagaatcaccccacccaagctcctgagaaaatccataagcaatatatgtttttgggccc |
4299628 |
T |
|
| Q |
142 |
atgtc |
146 |
Q |
| |
|
||||| |
|
|
| T |
4299627 |
atgtc |
4299623 |
T |
|
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Target: scaffold0020 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0020
Description:
Target: scaffold0020; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 131
Target Start/End: Original strand, 136201 - 136292
Alignment:
| Q |
40 |
ttgaagcatactgcatcagacacatcacaatggagcttagtcacagaatcaccacgtccgagattctgagcaaatccataagcaatatatgt |
131 |
Q |
| |
|
||||| |||||| ||||||||| ||||||||||||||| ||||| |||||||| || || || | || || |||||||||||||| |||||| |
|
|
| T |
136201 |
ttgaaacatactacatcagacatatcacaatggagctttgtcacggaatcaccccgcccaagctcctcagaaaatccataagcaaaatatgt |
136292 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0020; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 425
Target Start/End: Original strand, 136481 - 136574
Alignment:
| Q |
332 |
tgcgaccatttgtgtacccagtgaagaattggtggatattaatatctccctgcattcaatgaacaactcaaataaaaatgcagaaattaccagc |
425 |
Q |
| |
|
||||||||||||||||||| | ||||| | || | |||||||| |||||||||| ||| |||||||| ||||||||| ||||||||| |||| |
|
|
| T |
136481 |
tgcgaccatttgtgtacccgctaaagaaatcgttcacattaatatttccctgcatttaatcaacaactcgaataaaaattcagaaattatcagc |
136574 |
T |
|
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