View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5689_low_16 (Length: 437)
Name: NF5689_low_16
Description: NF5689
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5689_low_16 |
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Alignment Details
Target: chr7 (Bit Score: 309; Significance: 1e-174; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 18 - 350
Target Start/End: Original strand, 45082600 - 45082931
Alignment:
| Q |
18 |
gaattgaaccacaaaaagttatatttaagaattgacacattagttgaccatgtcaccactacaaatggctttatttatgctgaatatgaaaagttttcaa |
117 |
Q |
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| T |
45082600 |
gaattgaaccacaaaaagttatattcaagaattgacacattagttgaccatgtcaccactacaaatggctttatttatgctgaatatgagaagttttcaa |
45082699 |
T |
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| Q |
118 |
taatcatttgaaaataacattttcaacattcttggccacacaaggctcacacctgtgctagctatctataatttgttgcctatatgagcaaaaacagtac |
217 |
Q |
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| T |
45082700 |
taatcatttgaaaataacattgtcaacattcttggccacacaaggctcacacctgtgctagctatctataatttgttgcctatatgagcaaaaacagtgc |
45082799 |
T |
|
| Q |
218 |
tcaaccattgacactggctgtataaatcaataccagattgtaataatagaaggctggtgcatgcctactcacacacaccagcaaaacaacctcatcatgt |
317 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
45082800 |
tcaaccattgacactggctgtataaatcaataccagattgtaataatagaaggctggtgcatgcctactcacacaca-cagcaaaacaacctcatcatgt |
45082898 |
T |
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| Q |
318 |
aaatttaagcaattatgtatgatttttagtcat |
350 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
45082899 |
aaatttaagcaattatgtatgatttttagtcat |
45082931 |
T |
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