View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5689_low_82 (Length: 207)

Name: NF5689_low_82
Description: NF5689
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5689_low_82
NF5689_low_82
[»] chr2 (51 HSPs)
chr2 (66-201)||(2377195-2377330)
chr2 (65-192)||(9496017-9496149)
chr2 (67-192)||(45543074-45543203)
chr2 (60-186)||(12734857-12734988)
chr2 (113-186)||(19336945-19337018)
chr2 (61-186)||(28508835-28508965)
chr2 (121-186)||(12141701-12141766)
chr2 (5-100)||(2073252-2073341)
chr2 (70-192)||(33504374-33504502)
chr2 (60-186)||(38430041-38430171)
chr2 (65-186)||(2610745-2610871)
chr2 (122-192)||(9556430-9556500)
chr2 (65-186)||(25834835-25834961)
chr2 (60-160)||(227372-227477)
chr2 (60-160)||(3635317-3635422)
chr2 (60-192)||(12882039-12882176)
chr2 (65-161)||(43573129-43573230)
chr2 (68-190)||(8180933-8181060)
chr2 (65-191)||(8197540-8197671)
chr2 (65-191)||(8202300-8202431)
chr2 (66-192)||(31959672-31959803)
chr2 (121-192)||(33287572-33287643)
chr2 (121-192)||(37470193-37470264)
chr2 (113-192)||(42149712-42149791)
chr2 (65-158)||(30306217-30306315)
chr2 (116-186)||(39029738-39029808)
chr2 (65-149)||(9531599-9531688)
chr2 (67-175)||(18959079-18959192)
chr2 (123-192)||(26784402-26784471)
chr2 (69-186)||(45077884-45078008)
chr2 (122-175)||(45437010-45437063)
chr2 (121-177)||(32402666-32402722)
chr2 (125-192)||(21834705-21834772)
chr2 (113-192)||(23915745-23915824)
chr2 (116-199)||(23997747-23997829)
chr2 (127-186)||(26670925-26670984)
chr2 (121-175)||(6219133-6219187)
chr2 (66-100)||(17429298-17429332)
chr2 (60-114)||(17670702-17670756)
chr2 (121-183)||(37452286-37452348)
chr2 (60-114)||(38328364-38328418)
chr2 (65-103)||(42543480-42543518)
chr2 (65-114)||(4807829-4807878)
chr2 (129-186)||(11412865-11412921)
chr2 (65-114)||(12520061-12520110)
chr2 (123-192)||(19235046-19235115)
chr2 (63-100)||(24583628-24583665)
chr2 (66-186)||(38452686-38452811)
chr2 (66-114)||(12474927-12474975)
chr2 (67-158)||(39709202-39709298)
chr2 (66-114)||(41763043-41763091)
[»] chr3 (50 HSPs)
chr3 (66-192)||(45289091-45289222)
chr3 (66-192)||(49042087-49042219)
chr3 (65-199)||(53519725-53519863)
chr3 (60-192)||(48508386-48508523)
chr3 (60-192)||(54128530-54128667)
chr3 (121-192)||(49841767-49841838)
chr3 (113-186)||(36304123-36304196)
chr3 (60-186)||(12096699-12096830)
chr3 (121-192)||(39600741-39600812)
chr3 (66-191)||(15296059-15296189)
chr3 (121-183)||(29601052-29601114)
chr3 (60-160)||(5169015-5169120)
chr3 (66-174)||(11284157-11284270)
chr3 (64-192)||(50960635-50960768)
chr3 (65-181)||(52156083-52156204)
chr3 (65-192)||(19676080-19676212)
chr3 (66-161)||(40106620-40106720)
chr3 (113-173)||(40116390-40116450)
chr3 (125-192)||(19162652-19162718)
chr3 (67-114)||(21862742-21862789)
chr3 (113-192)||(40116520-40116599)
chr3 (60-154)||(45374471-45374570)
chr3 (60-186)||(53262298-53262429)
chr3 (121-199)||(19758032-19758109)
chr3 (65-186)||(52138957-52139083)
chr3 (65-192)||(45486848-45486983)
chr3 (60-160)||(47555326-47555431)
chr3 (65-160)||(2133611-2133711)
chr3 (122-170)||(38431021-38431069)
chr3 (121-189)||(39235292-39235360)
chr3 (127-171)||(44571599-44571643)
chr3 (122-186)||(50237695-50237759)
chr3 (125-192)||(30294185-30294252)
chr3 (66-160)||(38060897-38060996)
chr3 (60-162)||(39208789-39208896)
chr3 (63-114)||(39512777-39512828)
chr3 (149-192)||(46431767-46431810)
chr3 (121-168)||(55244453-55244500)
chr3 (121-199)||(19737129-19737206)
chr3 (65-103)||(23610931-23610969)
chr3 (145-191)||(26490467-26490513)
chr3 (116-186)||(35033303-35033373)
chr3 (121-175)||(37779045-37779099)
chr3 (113-186)||(29475843-29475916)
chr3 (65-114)||(50249611-50249660)
chr3 (60-100)||(311303-311343)
chr3 (66-114)||(31566161-31566209)
chr3 (60-100)||(41230509-41230549)
chr3 (116-192)||(42026591-42026667)
chr3 (113-193)||(52678902-52678982)
[»] chr8 (41 HSPs)
chr8 (60-175)||(490503-490623)
chr8 (113-172)||(29520820-29520879)
chr8 (113-173)||(43904717-43904777)
chr8 (66-192)||(2216439-2216568)
chr8 (65-175)||(23492202-23492317)
chr8 (64-186)||(25473401-25473528)
chr8 (121-192)||(30559844-30559915)
chr8 (66-192)||(35914601-35914732)
chr8 (64-186)||(45041314-45041440)
chr8 (66-192)||(45419386-45419517)
chr8 (65-186)||(11523722-11523848)
chr8 (65-171)||(31715992-31716105)
chr8 (115-192)||(17491708-17491785)
chr8 (60-192)||(35643602-35643737)
chr8 (65-192)||(5908797-5908929)
chr8 (123-174)||(16917352-16917403)
chr8 (125-192)||(33827821-33827888)
chr8 (65-186)||(36545306-36545432)
chr8 (65-186)||(42469726-42469852)
chr8 (113-186)||(36069759-36069832)
chr8 (113-186)||(38391945-38392018)
chr8 (125-201)||(12025920-12025995)
chr8 (113-192)||(16705898-16705978)
chr8 (66-173)||(44529395-44529507)
chr8 (121-192)||(28169543-28169614)
chr8 (65-161)||(42584541-42584641)
chr8 (121-191)||(9904942-9905012)
chr8 (60-114)||(14742076-14742130)
chr8 (127-189)||(35825522-35825584)
chr8 (60-113)||(1064955-1065008)
chr8 (65-133)||(1928586-1928659)
chr8 (128-181)||(12966381-12966434)
chr8 (116-189)||(27037789-27037862)
chr8 (113-186)||(35362702-35362775)
chr8 (121-186)||(41971850-41971915)
chr8 (60-160)||(44047526-44047631)
chr8 (60-100)||(4558202-4558242)
chr8 (124-192)||(10079970-10080038)
chr8 (60-100)||(24837939-24837979)
chr8 (60-100)||(32043835-32043875)
chr8 (121-201)||(33076268-33076346)
[»] chr7 (63 HSPs)
chr7 (66-192)||(40979928-40980059)
chr7 (65-175)||(36101776-36101891)
chr7 (62-187)||(27648936-27649066)
chr7 (69-192)||(28627936-28628064)
chr7 (124-199)||(28542007-28542081)
chr7 (113-192)||(38135265-38135344)
chr7 (121-175)||(37976403-37976457)
chr7 (113-185)||(1569174-1569246)
chr7 (65-192)||(9210703-9210835)
chr7 (60-199)||(32631709-32631852)
chr7 (121-192)||(21517440-21517511)
chr7 (60-186)||(22349777-22349908)
chr7 (60-186)||(27893557-27893688)
chr7 (113-192)||(36239848-36239927)
chr7 (65-186)||(11594117-11594243)
chr7 (65-186)||(43281831-43281957)
chr7 (65-186)||(45836481-45836607)
chr7 (121-170)||(5577547-5577596)
chr7 (60-156)||(28208322-28208423)
chr7 (65-192)||(42187592-42187724)
chr7 (65-160)||(2885721-2885821)
chr7 (60-199)||(38607137-38607280)
chr7 (60-186)||(44855168-44855297)
chr7 (60-186)||(12841269-12841400)
chr7 (60-186)||(29650541-29650672)
chr7 (66-180)||(33731997-33732114)
chr7 (113-192)||(36136915-36136994)
chr7 (65-186)||(39906371-39906497)
chr7 (127-192)||(24549754-24549819)
chr7 (121-186)||(35922410-35922475)
chr7 (64-175)||(21078085-21078201)
chr7 (121-192)||(12966167-12966238)
chr7 (121-192)||(14057629-14057700)
chr7 (121-192)||(14367657-14367728)
chr7 (60-186)||(31682596-31682727)
chr7 (61-100)||(33650865-33650904)
chr7 (59-114)||(43491542-43491597)
chr7 (125-192)||(45601627-45601694)
chr7 (64-161)||(1011229-1011330)
chr7 (121-187)||(5418223-5418288)
chr7 (64-114)||(7273334-7273384)
chr7 (65-103)||(20899416-20899454)
chr7 (62-100)||(21244279-21244317)
chr7 (113-191)||(26741946-26742024)
chr7 (119-192)||(28562423-28562497)
chr7 (60-114)||(31005439-31005493)
chr7 (60-114)||(31869096-31869150)
chr7 (65-186)||(37618102-37618228)
chr7 (121-171)||(42969870-42969920)
chr7 (68-114)||(46355858-46355904)
chr7 (121-175)||(47848841-47848895)
chr7 (113-190)||(2882788-2882865)
chr7 (65-114)||(5418308-5418357)
chr7 (131-192)||(32368407-32368468)
chr7 (69-114)||(39812172-39812217)
chr7 (77-161)||(47852269-47852358)
chr7 (66-186)||(48919269-48919394)
chr7 (116-192)||(22174151-22174227)
chr7 (118-186)||(35559050-35559118)
chr7 (60-100)||(35725565-35725605)
chr7 (114-193)||(40169805-40169884)
chr7 (121-192)||(44401187-44401256)
chr7 (60-100)||(47413709-47413749)
[»] chr1 (59 HSPs)
chr1 (65-192)||(41560380-41560512)
chr1 (65-192)||(8796360-8796492)
chr1 (65-192)||(11941579-11941711)
chr1 (64-199)||(36623883-36624021)
chr1 (67-192)||(29128934-29129065)
chr1 (65-192)||(38807670-38807802)
chr1 (60-186)||(25979225-25979356)
chr1 (65-172)||(4707220-4707331)
chr1 (71-170)||(19908040-19908144)
chr1 (69-192)||(52532619-52532747)
chr1 (121-192)||(27520267-27520338)
chr1 (60-186)||(30202124-30202255)
chr1 (121-192)||(40416522-40416593)
chr1 (65-186)||(1210902-1211028)
chr1 (65-186)||(37311754-37311880)
chr1 (67-192)||(52561590-52561720)
chr1 (65-153)||(28090693-28090786)
chr1 (60-168)||(34444531-34444644)
chr1 (66-186)||(49347393-49347518)
chr1 (66-186)||(52921237-52921362)
chr1 (124-184)||(10200369-10200429)
chr1 (65-192)||(32404526-32404657)
chr1 (65-192)||(39318280-39318411)
chr1 (121-185)||(43375658-43375722)
chr1 (121-192)||(3818916-3818987)
chr1 (121-192)||(7762497-7762568)
chr1 (113-192)||(9509469-9509548)
chr1 (121-188)||(29577203-29577269)
chr1 (150-192)||(8676954-8676996)
chr1 (68-172)||(37462878-37462986)
chr1 (60-160)||(51602239-51602344)
chr1 (113-182)||(52878351-52878420)
chr1 (126-186)||(4001520-4001580)
chr1 (124-184)||(6025764-6025824)
chr1 (116-192)||(42501259-42501335)
chr1 (113-168)||(6084150-6084205)
chr1 (121-168)||(13827640-13827687)
chr1 (60-99)||(37430414-37430453)
chr1 (54-100)||(2914111-2914157)
chr1 (150-192)||(8203223-8203265)
chr1 (116-186)||(8672075-8672145)
chr1 (113-191)||(9599446-9599524)
chr1 (120-186)||(10569130-10569196)
chr1 (65-186)||(19936617-19936743)
chr1 (66-143)||(21769711-21769793)
chr1 (66-167)||(25715326-25715432)
chr1 (125-199)||(32082821-32082894)
chr1 (69-186)||(39140672-39140794)
chr1 (60-114)||(43481792-43481846)
chr1 (65-150)||(44941775-44941865)
chr1 (121-186)||(990518-990583)
chr1 (65-114)||(29577486-29577535)
chr1 (121-174)||(40920589-40920642)
chr1 (67-186)||(4590533-4590657)
chr1 (60-100)||(8809495-8809535)
chr1 (60-100)||(30985302-30985342)
chr1 (65-113)||(38758019-38758067)
chr1 (116-192)||(38869033-38869109)
chr1 (66-98)||(50771555-50771587)
[»] chr4 (57 HSPs)
chr4 (60-182)||(55007907-55008034)
chr4 (67-192)||(26037506-26037636)
chr4 (65-170)||(34208268-34208378)
chr4 (65-185)||(25574982-25575107)
chr4 (66-186)||(31959814-31959939)
chr4 (60-192)||(37488242-37488379)
chr4 (67-186)||(26024851-26024975)
chr4 (113-185)||(27049229-27049301)
chr4 (65-160)||(39100535-39100635)
chr4 (66-181)||(48622543-48622663)
chr4 (68-183)||(55388213-55388333)
chr4 (60-186)||(1777011-1777142)
chr4 (69-199)||(31459139-31459273)
chr4 (125-191)||(31043224-31043290)
chr4 (66-191)||(42639020-42639150)
chr4 (122-192)||(45204900-45204970)
chr4 (65-186)||(52569514-52569640)
chr4 (121-186)||(30621261-30621326)
chr4 (60-192)||(35690422-35690559)
chr4 (113-186)||(56439623-56439696)
chr4 (77-192)||(39708584-39708704)
chr4 (60-186)||(8286596-8286727)
chr4 (60-186)||(21528445-21528576)
chr4 (113-192)||(49987559-49987638)
chr4 (121-192)||(51421881-51421952)
chr4 (113-175)||(53518375-53518437)
chr4 (117-186)||(55768555-55768624)
chr4 (117-186)||(55832811-55832880)
chr4 (64-175)||(22420715-22420831)
chr4 (121-173)||(26510558-26510610)
chr4 (69-168)||(31339699-31339803)
chr4 (69-192)||(37042667-37042795)
chr4 (113-168)||(5306471-5306526)
chr4 (121-192)||(21107143-21107214)
chr4 (60-186)||(21237015-21237146)
chr4 (122-192)||(40420275-40420343)
chr4 (121-192)||(47372802-47372873)
chr4 (60-99)||(48451067-48451106)
chr4 (121-192)||(53540441-53540512)
chr4 (60-114)||(30634100-30634154)
chr4 (121-175)||(41192229-41192283)
chr4 (121-186)||(47147530-47147593)
chr4 (60-114)||(50238609-50238663)
chr4 (60-114)||(50238695-50238749)
chr4 (65-115)||(56130403-56130453)
chr4 (65-114)||(436463-436512)
chr4 (60-160)||(19154857-19154962)
chr4 (127-192)||(28550521-28550586)
chr4 (113-186)||(34233076-34233149)
chr4 (115-160)||(41729504-41729549)
chr4 (65-114)||(43434158-43434207)
chr4 (65-114)||(45209204-45209253)
chr4 (65-114)||(46153942-46153991)
chr4 (121-192)||(33225895-33225964)
chr4 (121-185)||(44384988-44385052)
chr4 (65-160)||(47265194-47265294)
chr4 (60-100)||(49454473-49454513)
[»] chr5 (34 HSPs)
chr5 (65-186)||(13561385-13561511)
chr5 (65-175)||(418033-418148)
chr5 (65-192)||(11675680-11675813)
chr5 (121-193)||(9235197-9235269)
chr5 (65-192)||(14667922-14668054)
chr5 (121-191)||(12576920-12576990)
chr5 (65-186)||(29816539-29816665)
chr5 (66-186)||(3302001-3302126)
chr5 (121-185)||(17340496-17340560)
chr5 (65-152)||(18855798-18855890)
chr5 (60-186)||(4496541-4496672)
chr5 (113-192)||(6889144-6889223)
chr5 (60-186)||(12492378-12492509)
chr5 (125-192)||(14725669-14725736)
chr5 (60-186)||(28976853-28976984)
chr5 (63-114)||(36551380-36551431)
chr5 (64-192)||(5303595-5303731)
chr5 (63-136)||(38132543-38132621)
chr5 (77-186)||(38685124-38685238)
chr5 (64-160)||(5558324-5558425)
chr5 (125-192)||(23980095-23980162)
chr5 (149-192)||(28186863-28186906)
chr5 (132-175)||(41894234-41894277)
chr5 (60-160)||(14665897-14666000)
chr5 (121-175)||(43557893-43557947)
chr5 (65-114)||(408493-408542)
chr5 (65-114)||(2645224-2645273)
chr5 (121-186)||(35615440-35615505)
chr5 (138-199)||(36200874-36200934)
chr5 (65-159)||(38830504-38830602)
chr5 (60-100)||(4653500-4653540)
chr5 (60-100)||(9234134-9234174)
chr5 (60-100)||(29929302-29929342)
chr5 (113-161)||(32442177-32442225)
[»] chr6 (26 HSPs)
chr6 (65-192)||(34504-34636)
chr6 (65-160)||(12890758-12890858)
chr6 (59-186)||(34143758-34143890)
chr6 (59-186)||(34156374-34156506)
chr6 (121-192)||(9593768-9593839)
chr6 (65-185)||(5897615-5897740)
chr6 (66-172)||(9706941-9707052)
chr6 (60-186)||(28085533-28085664)
chr6 (121-192)||(31818682-31818753)
chr6 (113-175)||(5096002-5096064)
chr6 (121-191)||(24665963-24666033)
chr6 (113-186)||(14389213-14389286)
chr6 (128-192)||(43119-43183)
chr6 (122-186)||(1748006-1748070)
chr6 (65-192)||(8364707-8364839)
chr6 (60-186)||(10098890-10099019)
chr6 (66-160)||(34934830-34934929)
chr6 (122-192)||(6055832-6055902)
chr6 (64-114)||(12133900-12133950)
chr6 (69-186)||(30031413-30031535)
chr6 (116-186)||(32756078-32756148)
chr6 (113-170)||(9568872-9568929)
chr6 (127-186)||(18238210-18238270)
chr6 (68-100)||(20864835-20864867)
chr6 (123-186)||(31831920-31831984)
chr6 (66-114)||(33730199-33730247)
[»] scaffold0570 (1 HSPs)
scaffold0570 (65-186)||(947-1073)
[»] scaffold0041 (1 HSPs)
scaffold0041 (66-186)||(16735-16860)
[»] scaffold1318 (1 HSPs)
scaffold1318 (64-186)||(488-615)
[»] scaffold0279 (1 HSPs)
scaffold0279 (149-192)||(17690-17733)
[»] scaffold0180 (1 HSPs)
scaffold0180 (121-186)||(25503-25569)
[»] scaffold0168 (1 HSPs)
scaffold0168 (60-114)||(28883-28937)
[»] scaffold0025 (1 HSPs)
scaffold0025 (113-175)||(39487-39549)
[»] scaffold0010 (1 HSPs)
scaffold0010 (113-191)||(160376-160454)
[»] scaffold0018 (1 HSPs)
scaffold0018 (65-114)||(31702-31751)


Alignment Details
Target: chr2 (Bit Score: 128; Significance: 2e-66; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 66 - 201
Target Start/End: Complemental strand, 2377330 - 2377195
Alignment:
Q  66 acaacaacaagcaagccttatctcactaagtggggccgacgacatggattacgctataatgttctatcatataccatagttggatccaactcattattct 165  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2377330 acaacaataaccaagccttatctcactaagtggggccgacgacatggattacgctataatgttctatcatataccatagttggatccaactcattattct 2377231  T
Q  166 ctaaatcttttttaatagtttatcttaggtcttcat 201  Q
    ||||||||||||||||||||||||||||||||||||    
T  2377230 ctaaatcttttttaatagtttatcttaggtcttcat 2377195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 65 - 192
Target Start/End: Complemental strand, 9496149 - 9496017
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcat 159  Q
    ||||||||||| |||||||| || ||||||||||||  | | ||||||||     ||||| |||||||||||||||| |||||| |||||||||||||||    
T  9496149 aacaacaacaaccaagccttgtcccactaagtggggttggctacatggatcaaattacgccataatgttctatcataaaccatatttggatccaactcat 9496050  T
Q  160 tattctctaaatcttttttaatagtttatctta 192  Q
    ||  |||||||||||| | |||||||| |||||    
T  9496049 taacctctaaatctttctgaatagtttctctta 9496017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 67 - 192
Target Start/End: Original strand, 45543074 - 45543203
Alignment:
Q  67 caacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatta 161  Q
    ||||||||||||||| ||||| |||||||||||| || | |||| |||     ||||| |||||||||||||||| |||||| ||||||| |||||||||    
T  45543074 caacaacaagcaagcattatcccactaagtggggtcggctacatagatcaaagtacgccataatgttctatcataaaccatatttggatcgaactcatta 45543173  T
Q  162 ttctctaaatcttttttaatagtttatctta 192  Q
      ||||||||||||| ||||||||| |||||    
T  45543174 -cctctaaatcttttctaatagtttctctta 45543203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 60 - 186
Target Start/End: Complemental strand, 12734988 - 12734857
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaa 154  Q
    |||| ||||||||||| ||||||||||| |||||||||||| |||| ||||||||     ||| | ||| |||||||||||| |||||| ||||||||||    
T  12734988 acaacaacaacaacaaccaagccttatcccactaagtggggtcgactacatggatcaaattacaccatagtgttctatcataaaccatatttggatccaa 12734889  T
Q  155 ctcattattctctaaatcttttttaatagttt 186  Q
    ||||||   ||||||||| ||| |||| ||||    
T  12734888 ctcattgacctctaaatcctttctaatggttt 12734857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 113 - 186
Target Start/End: Original strand, 19336945 - 19337018
Alignment:
Q  113 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 186  Q
    ||||||| |||||||||||||||| |||||| || |||||||||||||| ||||||||||||| || |||||||    
T  19336945 attacgccataatgttctatcataaaccatatttcgatccaactcattaatctctaaatctttctttatagttt 19337018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 61 - 186
Target Start/End: Complemental strand, 28508965 - 28508835
Alignment:
Q  61 caaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaac 155  Q
    ||||||||||||||| ||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||| | |||||||||||    
T  28508965 caaaaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccaaatttggatccaac 28508866  T
Q  156 tcattattctctaaatcttttttaatagttt 186  Q
    |||||   ||||||||| ||| |||| ||||    
T  28508865 tcattgacctctaaatcctttctaatggttt 28508835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 12141766 - 12141701
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 186  Q
    ||||||||||||||||||||||| |||||||||| |||||| ||||||| |||||  |||||||||    
T  12141766 ataatgttctatcatataccatatttggatccaagtcattaatctctaagtctttcctaatagttt 12141701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 2073252 - 2073341
Alignment:
Q  5 ctgaaacaattataaattagggagagtatttcaaaaagagtaaaatatctgtgagacaaaaacaacaacaagcaagccttatctcactaagtgggg 100  Q
    |||||||||||||||||||| || ||||||||||||| | |||||| ||||||      | |||||||||| ||||||||||| ||||||||||||    
T  2073252 ctgaaacaattataaattagtgatagtatttcaaaaaaattaaaatttctgtg------atacaacaacaaccaagccttatcccactaagtgggg 2073341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 192
Target Start/End: Complemental strand, 33504502 - 33504374
Alignment:
Q  70 caacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt-att 163  Q
    |||||| ||||||||||| |||||||||||| || | | ||||||     ||||| ||||||||||||||||||||||| ||  |||||||| ||| | |    
T  33504502 caacaaccaagccttatcccactaagtggggtcggctagatggatcaaattacgccataatgttctatcatataccatatttcaatccaacttattaaat 33504403  T
Q  164 ctctaaatcttttttaatagtttatctta 192  Q
    ||||| |||||| |||||||||| |||||    
T  33504402 ctctagatctttcttaatagtttctctta 33504374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 60 - 186
Target Start/End: Complemental strand, 38430171 - 38430041
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaa 154  Q
    |||| ||||||||||  |||||||||||||||||||||||| || | |||||||| |     ||| ||| |||||||||| | |||||| ||||||||||    
T  38430171 acaacaacaacaacac-caagccttatctcactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaa 38430073  T
Q  155 ctcattattctctaaatcttttttaatagttt 186  Q
    ||||||   ||||||||||||| |||| ||||    
T  38430072 ctcattgacctctaaatcttttctaatggttt 38430041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 186
Target Start/End: Complemental strand, 2610871 - 2610745
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcat 159  Q
    ||||||||||| |||||||||||||||||||||||| ||   ||||||     || |||| ||| |||||||||||| |||| | |||||||||||||||    
T  2610871 aacaacaacaaccaagccttatctcactaagtggggtcggttacatggatcaaataacgccatagtgttctatcatacaccaaatttggatccaactcat 2610772  T
Q  160 tattctctaaatcttttttaatagttt 186  Q
    |   ||||||||| ||| |||| ||||    
T  2610771 tgacctctaaatcctttctaatggttt 2610745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 192
Target Start/End: Original strand, 9556430 - 9556500
Alignment:
Q  122 taatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    ||||||||||||||| ||||||  | |||||||||||||| || ||| |||||| ||||||||||||||||    
T  9556430 taatgttctatcataaaccatatcttgatccaactcattaatcactagatctttcttaatagtttatctta 9556500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 186
Target Start/End: Complemental strand, 25834961 - 25834835
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcat 159  Q
    ||||||||||| ||||||||||| |||||||||||| || | |||||||| |     ||| | | |||||||||||| |||||| |||||||||||||||    
T  25834961 aacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccacagtgttctatcataaaccatatttggatccaactcat 25834862  T
Q  160 tattctctaaatcttttttaatagttt 186  Q
    |   ||||||||| ||| |||| ||||    
T  25834861 tgacctctaaatcctttctaatggttt 25834835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 160
Target Start/End: Complemental strand, 227477 - 227372
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaa 154  Q
    |||| ||||||||||| ||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||| | ||||||||||    
T  227477 acaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaa 227378  T
Q  155 ctcatt 160  Q
    ||||||    
T  227377 ctcatt 227372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 160
Target Start/End: Original strand, 3635317 - 3635422
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaa 154  Q
    |||| ||||||||||| ||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||| | |||||| ||||||||||    
T  3635317 acaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaa 3635416  T
Q  155 ctcatt 160  Q
    ||||||    
T  3635417 ctcatt 3635422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 192
Target Start/End: Original strand, 12882039 - 12882176
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaa 154  Q
    |||| ||||||||||| ||||||||||| ||||||||| ||  | | ||||||||     ||||| | |||||||||||| | |||||| ||||||||||    
T  12882039 acaacaacaacaacaaccaagccttatcccactaagtgaggtaggctacatggatcaaattacgccaaaatgttctatcacaaaccatatttggatccaa 12882138  T
Q  155 ctcattattctctaaatcttttttaatagtttatctta 192  Q
    |||||||  |||||||| |||  || |||||| |||||    
T  12882139 ctcattaacctctaaatatttcctagtagtttctctta 12882176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 161
Target Start/End: Original strand, 43573129 - 43573230
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcat 159  Q
    ||||||||||| ||||||||||| |||||||||||| || | ||||||     ||||||| |||| |||| |||||| | |||| |||||||||||||||    
T  43573129 aacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccataacgttcgatcataaatcatatttggatccaactcat 43573228  T
Q  160 ta 161  Q
    ||    
T  43573229 ta 43573230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 190
Target Start/End: Complemental strand, 8181060 - 8180933
Alignment:
Q  68 aacaacaagcaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattat 162  Q
    ||||||||  |||||||||| |||||||||||| || | |||||||| |     | ||||| |||||||||||| |||| | ||||||||||||||||      
T  8181060 aacaacaacgaagccttatcccactaagtggggtcggctacatggatcaaatgacactatagtgttctatcatacaccaaatttggatccaactcattga 8180961  T
Q  163 tctctaaatcttttttaatagtttatct 190  Q
     ||||||||| ||| |||| ||||||||    
T  8180960 cctctaaatcctttctaatggtttatct 8180933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 191
Target Start/End: Original strand, 8197540 - 8197671
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcat 159  Q
    ||||||||||| ||||| ||||| |||||||| ||| || | |||||||| |     ||| ||||| |||||||||||| |||| ||  |||||||||||    
T  8197540 aacaacaacaaccaagcattatcccactaagtagggtcggctacatggatcaaacgacgccataatattctatcatatatcatatttctatccaactcat 8197639  T
Q  160 tattctctaaatcttttttaatagtttatctt 191  Q
    || ||| || |||||| |||||||||| ||||    
T  8197640 taatctttagatctttcttaatagtttctctt 8197671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 191
Target Start/End: Original strand, 8202300 - 8202431
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcat 159  Q
    ||||||||||| ||||| ||||| |||||||| ||| || | |||||||| |     ||| ||||| |||||||||||| |||| ||  |||||||||||    
T  8202300 aacaacaacaaccaagcattatcccactaagtagggtcggctacatggatcaaacgacgccataatattctatcatatatcatatttctatccaactcat 8202399  T
Q  160 tattctctaaatcttttttaatagtttatctt 191  Q
    || ||| || |||||| |||||||||| ||||    
T  8202400 taatctttagatctttcttaatagtttctctt 8202431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 192
Target Start/End: Complemental strand, 31959803 - 31959672
Alignment:
Q  66 acaacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 160  Q
    |||||||||| |||||||||||  ||||||||||| |  | ||||||||     || || ||| |||||||||||| |||||| ||||||||||||||||    
T  31959803 acaacaacaaccaagccttatcctactaagtggggtctgctacatggatcaaattatgccatagtgttctatcataaaccatatttggatccaactcatt 31959704  T
Q  161 attctctaaatcttttttaatagtttatctta 192  Q
       ||||||||| ||| |||| |||| |||||    
T  31959703 gacctctaaatcctttctaatggtttctctta 31959672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 192
Target Start/End: Complemental strand, 33287643 - 33287572
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    |||||||||||||||| |||||| || |||| ||||||||| | |||| |||||| |||||||||| |||||    
T  33287643 ataatgttctatcataaaccatatttcgatctaactcattaatttctagatctttcttaatagtttctctta 33287572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 192
Target Start/End: Original strand, 37470193 - 37470264
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    ||||||||||||||||| ||||| || |||||||||||||| |||||| |||| |  ||||||||| |||||    
T  37470193 ataatgttctatcatatgccatatttcgatccaactcattaatctctagatctgtcctaatagtttctctta 37470264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 192
Target Start/End: Original strand, 42149712 - 42149791
Alignment:
Q  113 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    ||||||| |||||||||||||||| |||||| ||  ||||| |||| || |||||| |||||| |||||||||| |||||    
T  42149712 attacgccataatgttctatcataaaccatatttctatccagctcaataatctctagatctttcttaatagtttctctta 42149791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 65 - 158
Target Start/End: Complemental strand, 30306315 - 30306217
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactca 158  Q
    ||||||||||| ||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||| | ||||||||||||||    
T  30306315 aacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccaaatttggatccaactca 30306217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 116 - 186
Target Start/End: Complemental strand, 39029808 - 39029738
Alignment:
Q  116 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 186  Q
    |||| |||||||||||||| | |||||| ||||||||||||||||   ||||||||||||| |||| ||||    
T  39029808 acgccataatgttctatcaaaaaccatatttggatccaactcattgacctctaaatcttttctaatggttt 39029738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 149
Target Start/End: Original strand, 9531599 - 9531688
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttgga 149  Q
    ||||||||||| ||||||||||| |||||||||||| || | ||||||     ||||||| ||||||||| |||||| |||||| |||||    
T  9531599 aacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccataatgttccatcataaaccatatttgga 9531688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 175
Target Start/End: Complemental strand, 18959192 - 18959079
Alignment:
Q  67 caacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatta 161  Q
    |||||| || ||||||||||| |||||||||||| |  | ||||||||     || || |||||||||||||||| |||||| || ||||||||||||||    
T  18959192 caacaataaccaagccttatcccactaagtggggtcagctacatggatcaaattatgccataatgttctatcatagaccatattttgatccaactcatta 18959093  T
Q  162 ttctctaaatcttt 175  Q
     |||| || |||||    
T  18959092 atctccaagtcttt 18959079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 192
Target Start/End: Original strand, 26784402 - 26784471
Alignment:
Q  123 aatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    |||||| |||||||||||||| ||  || |||||||||| |||||| |||||| |||||||||| |||||    
T  26784402 aatgttttatcatataccatatttctattcaactcattaatctctatatctttcttaatagtttctctta 26784471  T

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Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 186
Target Start/End: Complemental strand, 45078008 - 45077884
Alignment:
Q  69 acaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactc--atta 161  Q
    ||||||| ||||| |||||||||||||||||| ||   ||||||||     || || || ||||||||||||| || ||| || ||||||||||  ||||    
T  45078008 acaacaaccaagctttatctcactaagtggggtcggttacatggatcaaattatgccattatgttctatcataaactatatttcgatccaactctcatta 45077909  T
Q  162 ttctctaaatcttttttaatagttt 186  Q
     ||||||||||||| ||||||||||    
T  45077908 atctctaaatctttcttaatagttt 45077884  T

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Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 175
Target Start/End: Complemental strand, 45437063 - 45437010
Alignment:
Q  122 taatgttctatcatataccatagttggatccaactcattattctctaaatcttt 175  Q
    ||||||||||||| |||||||| ||||||||||  ||||| |||||||||||||    
T  45437063 taatgttctatcaaataccatatttggatccaatgcattaatctctaaatcttt 45437010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 177
Target Start/End: Complemental strand, 32402722 - 32402666
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttt 177  Q
    |||||||||||||||||||| || ||  ||||||||||||| |||||| ||||||||    
T  32402722 ataatgttctatcatataccttatttctatccaactcattaatctctagatcttttt 32402666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 125 - 192
Target Start/End: Complemental strand, 21834772 - 21834705
Alignment:
Q  125 tgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    |||||||||||| |||| | || |||||||||||||| ||| ||||| |||  |||||||||||||||    
T  21834772 tgttctatcataaaccaaatttagatccaactcattaatctataaatatttcctaatagtttatctta 21834705  T

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Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 113 - 192
Target Start/End: Original strand, 23915745 - 23915824
Alignment:
Q  113 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    ||||||| ||| |||||||||||| |||||||||   |||| ||||||| |||||| || ||| |||||||||| |||||    
T  23915745 attacgccatagtgttctatcataaaccatagttctgtccacctcattaatctctagatttttcttaatagtttctctta 23915824  T

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Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 116 - 199
Target Start/End: Complemental strand, 23997829 - 23997747
Alignment:
Q  116 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatcttaggtcttc 199  Q
    |||| ||| |||| ||||| | |||||| ||||||||||||||||   ||||||||||||| |||| |||| ||||||||||||    
T  23997829 acgccatagtgttttatcaaaaaccatatttggatccaactcattgacctctaaatcttttctaatggttt-tcttaggtcttc 23997747  T

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Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 127 - 186
Target Start/End: Complemental strand, 26670984 - 26670925
Alignment:
Q  127 ttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 186  Q
    |||||||||| | |||| || | |||||||||||| ||||||||||||| ||||||||||    
T  26670984 ttctatcataaatcatattttggtccaactcattaatctctaaatctttcttaatagttt 26670925  T

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Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 6219187 - 6219133
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttt 175  Q
    |||||||||||||||| |||||| || | ||||||||| || |||||||||||||    
T  6219187 ataatgttctatcataaaccatatttcggtccaactcactaatctctaaatcttt 6219133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 17429332 - 17429298
Alignment:
Q  66 acaacaacaagcaagccttatctcactaagtgggg 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  17429332 acaacaacaaccaagccttatctcactaagtgggg 17429298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 114
Target Start/End: Complemental strand, 17670756 - 17670702
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatggat 114  Q
    |||| ||||||||||| ||||||||||| |||||||||||| || | ||||||||    
T  17670756 acaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggat 17670702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 183
Target Start/End: Original strand, 37452286 - 37452348
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatag 183  Q
    |||||||||||||||| |||||| ||   |||||||||||| ||||||| ||||| |||||||    
T  37452286 ataatgttctatcataaaccatatttctgtccaactcattaatctctaattctttcttaatag 37452348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 114
Target Start/End: Original strand, 38328364 - 38328418
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatggat 114  Q
    |||| ||||||||||| ||||||||||| |||||||||||| || | ||||||||    
T  38328364 acaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggat 38328418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 103
Target Start/End: Complemental strand, 42543518 - 42543480
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccg 103  Q
    ||||||||||| ||||||||||| |||||||||||||||    
T  42543518 aacaacaacaaccaagccttatcccactaagtggggccg 42543480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 4807878 - 4807829
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggat 114  Q
    ||||||||||| ||||||||||| |||||||||||| || | ||||||||    
T  4807878 aacaacaacaaccaagccttatcccactaagtggggtcggctacatggat 4807829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 186
Target Start/End: Complemental strand, 11412921 - 11412865
Alignment:
Q  129 ctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 186  Q
    |||||||| |||||| ||||||||||||||||| ||||| |||||||  |||||||||    
T  11412921 ctatcataaaccatatttggatccaactcattaatctct-aatctttcctaatagttt 11412865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 114
Target Start/End: Original strand, 12520061 - 12520110
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggat 114  Q
    ||||||||||| ||||||||||| |||||||||||| || | ||||||||    
T  12520061 aacaacaacaaccaagccttatcccactaagtggggtcggctacatggat 12520110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 192
Target Start/End: Original strand, 19235046 - 19235115
Alignment:
Q  123 aatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    |||||||||||| |||||||| ||  |||||| |||||| |||||| |||||| | |||||||| |||||    
T  19235046 aatgttctatcaaataccatatttctatccaaatcattaatctctagatctttctcaatagtttctctta 19235115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 63 - 100
Target Start/End: Original strand, 24583628 - 24583665
Alignment:
Q  63 aaaacaacaacaagcaagccttatctcactaagtgggg 100  Q
    ||||||||||||| |||||||||||||| |||||||||    
T  24583628 aaaacaacaacaaccaagccttatctcattaagtgggg 24583665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 66 - 186
Target Start/End: Original strand, 38452686 - 38452811
Alignment:
Q  66 acaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 160  Q
    |||||||||| ||||||||||| |||||||||||| || | ||||||     || || | ||| |||| ||||||| |||| | ||||||||||||||||    
T  38452686 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcgaatgacaccatagtgttttatcatacaccaaatttggatccaactcatt 38452785  T
Q  161 attctctaaatcttttttaatagttt 186  Q
       ||||||||| ||| |||| ||||    
T  38452786 gacctctaaatcctttctaatggttt 38452811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 114
Target Start/End: Original strand, 12474927 - 12474975
Alignment:
Q  66 acaacaacaagcaagccttatctcactaagtggggccgacgacatggat 114  Q
    |||||||||| ||||||||||| |||||||||||| || | ||||||||    
T  12474927 acaacaacaaccaagccttatcccactaagtggggtcggctacatggat 12474975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 158
Target Start/End: Original strand, 39709202 - 39709298
Alignment:
Q  67 caacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactca 158  Q
    ||||||||| |||||| |||| |||||||||||| || | ||||||     ||||||| ||| ||||| |||||| |||||| || |||||||||||    
T  39709202 caacaacaaccaagccatatcccactaagtggggtcggctacatggatcaaattacgccatagtgttcaatcataaaccatattttgatccaactca 39709298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 114
Target Start/End: Original strand, 41763043 - 41763091
Alignment:
Q  66 acaacaacaagcaagccttatctcactaagtggggccgacgacatggat 114  Q
    |||||||||| ||||||||||| |||||||||||| || | ||||||||    
T  41763043 acaacaacaaccaagccttatcccactaagtggggtcggctacatggat 41763091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 4e-28; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 66 - 192
Target Start/End: Original strand, 45289091 - 45289222
Alignment:
Q  66 acaacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 160  Q
    |||||||||| ||||||||||| ||||||||||||  | ||||||||||     || ||||||||||||||||||| |||||| ||||||||||||||||    
T  45289091 acaacaacaaccaagccttatcccactaagtggggttggcgacatggatcaaattatgctataatgttctatcataaaccatatttggatccaactcatt 45289190  T
Q  161 attctctaaatcttttttaatagtttatctta 192  Q
    | |||||||||||||  ||||||||| |||||    
T  45289191 aatctctaaatctttcctaatagtttctctta 45289222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 66 - 192
Target Start/End: Complemental strand, 49042219 - 49042087
Alignment:
Q  66 acaacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatata-ccatagttggatccaactcat 159  Q
    |||||||||| ||||||||||||||| |||||||| || | ||||||||     ||||| ||| |||||||||||| | ||||| |||||||||||||||    
T  49042219 acaacaacaaccaagccttatctcaccaagtggggtcggctacatggatcaaattacgccatagtgttctatcataaaaccatatttggatccaactcat 49042120  T
Q  160 tattctctaaatcttttttaatagtttatctta 192  Q
    ||  ||||||||||||  ||||||||| |||||    
T  49042119 taacctctaaatctttcctaatagtttctctta 49042087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 65 - 199
Target Start/End: Complemental strand, 53519863 - 53519725
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcat 159  Q
    ||||||||||| |||||||||||||||||||||||| || | |||||||| |     ||  ||| |||||||||| | ||| || |||||||||||||||    
T  53519863 aacaacaacaaccaagccttatctcactaagtggggtcggctacatggatcaaatgacgtcatagtgttctatcaaaaaccttatttggatccaactcat 53519764  T
Q  160 tattctctaaatcttttttaatagtttatcttaggtcttc 199  Q
    |   |||||||||||||||||| |||| ||||||||||||    
T  53519763 tgacctctaaatcttttttaatggttt-tcttaggtcttc 53519725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 60 - 192
Target Start/End: Complemental strand, 48508523 - 48508386
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaa 154  Q
    |||| ||||||||||| ||||||||||| |||||||||||| || | ||||||||     ||||| ||| |||||||||||| |||||| ||| ||||||    
T  48508523 acaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccatagtgttctatcataaaccatatttgaatccaa 48508424  T
Q  155 ctcattattctctaaatcttttttaatagtttatctta 192  Q
    ||||||   ||||||||| ||| |||| |||| |||||    
T  48508423 ctcattgacctctaaatcctttctaatggtttctctta 48508386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 60 - 192
Target Start/End: Complemental strand, 54128667 - 54128530
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaa 154  Q
    |||| ||||||||||| ||||||||||| |||||||||||| || | ||||||||     || || |||||||||||||||| |||||| |||| |||||    
T  54128667 acaataacaacaacaaccaagccttatcccactaagtggggtcgcctacatggatcaaattatgccataatgttctatcataaaccatatttgggtccaa 54128568  T
Q  155 ctcattattctctaaatcttttttaatagtttatctta 192  Q
    ||||||   ||||||||||||  | ||||||| |||||    
T  54128567 ctcattgacctctaaatctttccttatagtttctctta 54128530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 121 - 192
Target Start/End: Complemental strand, 49841838 - 49841767
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    ||||||||||||||||||||||| || |||||||||||||| ||| || |||||| |||||||||| |||||    
T  49841838 ataatgttctatcatataccatatttcgatccaactcattaatctttagatctttgttaatagtttctctta 49841767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 113 - 186
Target Start/End: Complemental strand, 36304196 - 36304123
Alignment:
Q  113 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 186  Q
    ||||||| ||||||| |||||||| |||||| || |||||||||||||| |||||| |||||| ||||||||||    
T  36304196 attacgccataatgtcctatcataaaccatattttgatccaactcattaatctctagatctttcttaatagttt 36304123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 12096699 - 12096830
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaa 154  Q
    |||| ||||||||||| ||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||| | ||||||||||    
T  12096699 acaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaa 12096798  T
Q  155 ctcattattctctaaatcttttttaatagttt 186  Q
    ||||||   ||||||||| ||| |||| ||||    
T  12096799 ctcattgacctctaaatcctttctaatggttt 12096830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 121 - 192
Target Start/End: Original strand, 39600741 - 39600812
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    ||||||||||||| || |||| | |||||||||||||||||  |||||||||||| |||||||||| |||||    
T  39600741 ataatgttctatcgtaaaccagatttggatccaactcattaacctctaaatctttcttaatagtttctctta 39600812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 66 - 191
Target Start/End: Complemental strand, 15296189 - 15296059
Alignment:
Q  66 acaacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 160  Q
    |||||||||| ||||||||||| |||||||||||| || | ||||||||     ||| | |||||||||||||  | | |||| |||||||||| |||||    
T  15296189 acaacaacaaccaagccttatcccactaagtggggtcggccacatggatcaaattacaccataatgttctatccgaaatcatatttggatccaattcatt 15296090  T
Q  161 attctctaaatcttttttaatagtttatctt 191  Q
    |  ||||||||||||  ||||||||| ||||    
T  15296089 aacctctaaatctttcctaatagtttctctt 15296059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 183
Target Start/End: Complemental strand, 29601114 - 29601052
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatag 183  Q
    |||||||||||||||| || ||| ||| ||||||||||||| ||||||||||||| |||||||    
T  29601114 ataatgttctatcataaactatatttgaatccaactcattaatctctaaatctttcttaatag 29601052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 160
Target Start/End: Complemental strand, 5169120 - 5169015
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaa 154  Q
    |||| ||||||||||| ||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||| | |||||| ||||||||||    
T  5169120 acaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaa 5169021  T
Q  155 ctcatt 160  Q
    ||||||    
T  5169020 ctcatt 5169015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 174
Target Start/End: Complemental strand, 11284270 - 11284157
Alignment:
Q  66 acaacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 160  Q
    |||||||||||||||||||||||||||||| ||||  | | ||||||||      | || ||||||||| ||||||||||||| ||  ||||||||||||    
T  11284270 acaacaacaagcaagccttatctcactaagcggggttggctacatggatcaaacgatgcaataatgttcaatcatataccatatttatatccaactcatt 11284171  T
Q  161 attctctaaatctt 174  Q
    | |||||| |||||    
T  11284170 aatctctacatctt 11284157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 192
Target Start/End: Original strand, 50960635 - 50960768
Alignment:
Q  64 aaacaacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactca 158  Q
    ||||| |||||| ||||||||||| ||||||||||||  | | | ||||||     ||| | |||||| ||||| ||| |||||| ||||||||||||||    
T  50960635 aaacagcaacaaccaagccttatcccactaagtggggttggctaaatggatcaaattacaccataatggtctatgatacaccatatttggatccaactca 50960734  T
Q  159 ttattctctaaatcttttttaatagtttatctta 192  Q
    ||| |||||||| ||||  ||||||||| |||||    
T  50960735 ttaatctctaaacctttcctaatagtttctctta 50960768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 181
Target Start/End: Original strand, 52156083 - 52156204
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcat 159  Q
    ||||||||||| | ||||||||| |||||||||||| || | |||||||| |     ||| ||| |||||||||||| |||||| |||||||||||||||    
T  52156083 aacaacaacaaccgagccttatcccactaagtggggtcggctacatggatcagatgacgccatagtgttctatcataaaccatatttggatccaactcat 52156182  T
Q  160 tattctctaaatcttttttaat 181  Q
    |   ||||||||| ||| ||||    
T  52156183 tgacctctaaatcctttctaat 52156204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 65 - 192
Target Start/End: Original strand, 19676080 - 19676212
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcat 159  Q
    ||||| ||||| ||||||||||| |||||||||||| |  | |||||||| |     ||| |||||| ||||||||| | |||| |||||||||||||||    
T  19676080 aacaataacaaccaagccttatcccactaagtggggtcagctacatggatcaaatcacgccataatgctctatcatacagcatatttggatccaactcat 19676179  T
Q  160 tattctctaaatcttttttaatagtttatctta 192  Q
    ||  |||||||| |||  ||||||||| |||||    
T  19676180 taacctctaaatttttcctaatagtttctctta 19676212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 66 - 161
Target Start/End: Original strand, 40106620 - 40106720
Alignment:
Q  66 acaacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 160  Q
    |||||||||| ||||||||||| |||||||||||| | || |||| |||     || |  |||||||||||||||| |||||| ||||||||||||||||    
T  40106620 acaacaacaaccaagccttatcccactaagtggggtccactacattgatcaaattatgtcataatgttctatcataaaccatatttggatccaactcatt 40106719  T
Q  161 a 161  Q
    |    
T  40106720 a 40106720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 173
Target Start/End: Original strand, 40116390 - 40116450
Alignment:
Q  113 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatct 173  Q
    ||||||| |||||||||||||||| |||||| || | |||||||||||| |||||||||||    
T  40116390 attacgccataatgttctatcataaaccatatttcggtccaactcattaatctctaaatct 40116450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 192
Target Start/End: Original strand, 19162652 - 19162718
Alignment:
Q  125 tgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    ||||||||||| ||||||| ||| ||||||||||||| |||||||||||||  ||||||||| |||||    
T  19162652 tgttctatcat-taccatacttgcatccaactcattaatctctaaatctttcctaatagtttctctta 19162718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 114
Target Start/End: Original strand, 21862742 - 21862789
Alignment:
Q  67 caacaacaagcaagccttatctcactaagtggggccgacgacatggat 114  Q
    |||||||||||||||||||||||||||||||||| || | ||||||||    
T  21862742 caacaacaagcaagccttatctcactaagtggggtcggctacatggat 21862789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 192
Target Start/End: Original strand, 40116520 - 40116599
Alignment:
Q  113 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    ||||||| | |||||||||||||| |||||| || | |||||||||||| ||||||||||| |  ||||||||| |||||    
T  40116520 attacgccacaatgttctatcataaaccatatttcggtccaactcattaatctctaaatctatcctaatagtttctctta 40116599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 154
Target Start/End: Original strand, 45374471 - 45374570
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaa 154  Q
    |||| ||||||||||| ||||||||||| |||||||||||| |  | ||||||     ||||||| |||||||||||||  | |||||||||||||||||    
T  45374471 acaacaacaacaacaaccaagccttatcccactaagtggggtcagctacatggattaaattacgccataatgttctatccgaaaccatagttggatccaa 45374570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 186
Target Start/End: Complemental strand, 53262429 - 53262298
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaa 154  Q
    |||| ||||||||||| ||||||||||| |||||||||||| || | |||| |     || |||| ||| |||||||||| | |||||| ||||||||||    
T  53262429 acaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatagatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaa 53262330  T
Q  155 ctcattattctctaaatcttttttaatagttt 186  Q
    ||||||   |||||||||| || |||| ||||    
T  53262329 ctcattgacctctaaatctcttctaatggttt 53262298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 199
Target Start/End: Complemental strand, 19758109 - 19758032
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatcttaggtcttc 199  Q
    |||||||||||||||| |||||| |  |||||||||||||| ||||||||| |||  ||||||||| || |||||||||    
T  19758109 ataatgttctatcataaaccatattgagatccaactcattaatctctaaatatttcctaatagtttttc-taggtcttc 19758032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 65 - 186
Target Start/End: Complemental strand, 52139083 - 52138957
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcat 159  Q
    ||||||||||| ||||||||||| |||||||||||| || | ||||||     || |||  ||| |||||||||||| |||| | |||||||||||||||    
T  52139083 aacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaataacgtcatagtgttctatcatacaccaaatttggatccaactcat 52138984  T
Q  160 tattctctaaatcttttttaatagttt 186  Q
    |   ||||||||| ||| |||| ||||    
T  52138983 tgacctctaaatcctttctaatggttt 52138957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 192
Target Start/End: Original strand, 45486848 - 45486983
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatatacca---tagttggatccaact 156  Q
    ||||||||||| ||||| ||||| ||||||||||||||| | ||||||||     || || |||||||||||||||| ||||   || |||| ||||| |    
T  45486848 aacaacaacaaccaagctttatcccactaagtggggccggctacatggatcaaattatgccataatgttctatcataaaccatattatttggttccaagt 45486947  T
Q  157 cattattctctaaatcttttttaatagtttatctta 192  Q
    ||||| |||| || |||||  ||||||||| |||||    
T  45486948 cattaatctcaaagtctttcataatagtttctctta 45486983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 160
Target Start/End: Original strand, 47555326 - 47555431
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaa 154  Q
    |||| ||||||||||| ||||||||||| ||||||||||||  | | ||||||     || |||| ||| |||||||||||| |||| | ||||||||||    
T  47555326 acaacaacaacaacaaccaagccttatcccactaagtggggttggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaa 47555425  T
Q  155 ctcatt 160  Q
    ||||||    
T  47555426 ctcatt 47555431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 160
Target Start/End: Original strand, 2133611 - 2133711
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcat 159  Q
    ||||||||||| ||||||||||| |||||||||||| |||  ||||||     || |||| ||| |||||||||||| || ||| |||||| ||||||||    
T  2133611 aacaacaacaaccaagccttatcccactaagtggggtcgagtacatggatcaaatcacgccatagtgttctatcataaactatatttggattcaactcat 2133710  T
Q  160 t 160  Q
    |    
T  2133711 t 2133711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 38431069 - 38431021
Alignment:
Q  122 taatgttctatcatataccatagttggatccaactcattattctctaaa 170  Q
    ||||||||||||||| |||||| |||||||||||||||||  |||||||    
T  38431069 taatgttctatcataaaccatatttggatccaactcattaacctctaaa 38431021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 39235360 - 39235292
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatc 189  Q
    ||||||||||||| || |||||| || ||||||||||||||   |||||||||||  ||||||||||||    
T  39235360 ataatgttctatcgtaaaccatatttagatccaactcattaacttctaaatctttcctaatagtttatc 39235292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 44571643 - 44571599
Alignment:
Q  127 ttctatcatataccatagttggatccaactcattattctctaaat 171  Q
    |||||||||| |||||| ||||||||||||||||| |||||||||    
T  44571643 ttctatcataaaccatatttggatccaactcattaatctctaaat 44571599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 186
Target Start/End: Original strand, 50237695 - 50237759
Alignment:
Q  122 taatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 186  Q
    |||||||||||||||||| ||| ||  |||||||||| || ||||| ||||||| ||||||||||    
T  50237695 taatgttctatcatatacaatatttctatccaactcaataatctctgaatctttcttaatagttt 50237759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 125 - 192
Target Start/End: Original strand, 30294185 - 30294252
Alignment:
Q  125 tgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    |||| ||||||| | |||| || |||||||||||||   || ||||||||||||||||||||||||||    
T  30294185 tgttttatcataaatcatacttagatccaactcattgacctataaatcttttttaatagtttatctta 30294252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 66 - 160
Target Start/End: Complemental strand, 38060996 - 38060897
Alignment:
Q  66 acaacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 160  Q
    |||||||||| |||  |||||| |||||||||||| || | ||||||||     ||||| ||  |||||||||||| |||||| ||||||||||||||||    
T  38060996 acaacaacaaccaattcttatcccactaagtggggtcggctacatggatcaaattacgccatggtgttctatcataaaccatatttggatccaactcatt 38060897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 60 - 162
Target Start/End: Complemental strand, 39208896 - 39208789
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaa 154  Q
    |||| ||||||||||| |||||| |||| |||||| ||||| |  | ||||||||     ||||  |||||||||||||||| |||||| |||||||| |    
T  39208896 acaacaacaacaacaaccaagccatatcccactaactggggtcctctacatggatcaaattacgtcataatgttctatcataaaccatatttggatccta 39208797  T
Q  155 ctcattat 162  Q
    ||||||||    
T  39208796 ctcattat 39208789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 63 - 114
Target Start/End: Complemental strand, 39512828 - 39512777
Alignment:
Q  63 aaaacaacaacaagcaagccttatctcactaagtggggccgacgacatggat 114  Q
    ||||||||||||| ||||||||||| |||||||||||| || | ||||||||    
T  39512828 aaaacaacaacaaccaagccttatcccactaagtggggtcggctacatggat 39512777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 149 - 192
Target Start/End: Original strand, 46431767 - 46431810
Alignment:
Q  149 atccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    ||||||||||||| |||||| ||||||||||||||||| |||||    
T  46431767 atccaactcattaatctctagatcttttttaatagtttctctta 46431810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 168
Target Start/End: Complemental strand, 55244500 - 55244453
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctcta 168  Q
    ||||||||||||||||||||||| ||  ||||||||||||| ||||||    
T  55244500 ataatgttctatcatataccatatttctatccaactcattaatctcta 55244453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 199
Target Start/End: Complemental strand, 19737206 - 19737129
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatcttaggtcttc 199  Q
    |||||||| ||||||| |||||| |  |||||||||||||| ||||||||| |||  ||||||||| || |||||||||    
T  19737206 ataatgttttatcataaaccatattgagatccaactcattaatctctaaatatttcctaatagtttttc-taggtcttc 19737129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 23610931 - 23610969
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccg 103  Q
    ||||||||||| ||||||||||| |||||||||||||||    
T  23610931 aacaacaacaaccaagccttatcccactaagtggggccg 23610969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 191
Target Start/End: Complemental strand, 26490513 - 26490467
Alignment:
Q  145 ttggatccaactcattattctctaaatcttttttaatagtttatctt 191  Q
    ||||||| ||||||||| |||||||||||||| ||||||||| ||||    
T  26490513 ttggatcaaactcattagtctctaaatcttttctaatagtttctctt 26490467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 186
Target Start/End: Complemental strand, 35033373 - 35033303
Alignment:
Q  116 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 186  Q
    |||| ||| |||||||||| | |||||| ||||||||||||||||   ||||||||||||| |||| ||||    
T  35033373 acgccatagtgttctatcaaaaaccatatttggatccaactcattgacctctaaatcttttctaatggttt 35033303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 37779099 - 37779045
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttt 175  Q
    |||||||||||||||| |||||| | ||||| | ||||||| |||||||||||||    
T  37779099 ataatgttctatcataaaccatattcggatctagctcattaatctctaaatcttt 37779045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 113 - 186
Target Start/End: Complemental strand, 29475916 - 29475843
Alignment:
Q  113 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 186  Q
    ||||||| ||| | |||||||||| || ||| ||  ||||||||||||| |||||| |||||| ||||||||||    
T  29475916 attacgccatagttttctatcataaacaatatttcaatccaactcattaatctctagatctttcttaatagttt 29475843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 50249660 - 50249611
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggat 114  Q
    ||||||||||| |||||| |||| |||||||||||| |||| ||||||||    
T  50249660 aacaacaacaaccaagccgtatcccactaagtggggtcgactacatggat 50249611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 311303 - 311343
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtgggg 100  Q
    |||| ||||||||||| ||||||||||| ||||||||||||    
T  311303 acaacaacaacaacaaccaagccttatcccactaagtgggg 311343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 114
Target Start/End: Original strand, 31566161 - 31566209
Alignment:
Q  66 acaacaacaagcaagccttatctcactaagtggggccgacgacatggat 114  Q
    |||||||||| ||||||||||| |||||||||||| || | ||||||||    
T  31566161 acaacaacaaccaagccttatcccactaagtggggtcggctacatggat 31566209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 41230509 - 41230549
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtgggg 100  Q
    |||| ||||||||||| ||||||||||| ||||||||||||    
T  41230509 acaacaacaacaacaatcaagccttatcccactaagtgggg 41230549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 42026591 - 42026667
Alignment:
Q  116 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    |||| ||||||||||||||||||||||| ||  ||| ||||||||| || ||| |||  | |||||||||| |||||    
T  42026591 acgccataatgttctatcatataccatatttctatctaactcattaatccctatatcaatcttaatagtttctctta 42026667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 193
Target Start/End: Original strand, 52678902 - 52678982
Alignment:
Q  113 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatcttag 193  Q
    ||||||||||||| || ||||||  | |||| ||| || ||||||||||  ||||||||||||  ||||||||| ||||||    
T  52678902 attacgctataatattatatcatgaatcatatttgaattcaactcattaacctctaaatctttcataatagtttctcttag 52678982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 5e-24; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 60 - 175
Target Start/End: Complemental strand, 490623 - 490503
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaa 154  Q
    |||| ||||||||||| ||||||||||| |||||||||||| || | ||||||||     ||||| |||||||||||||||| |||||| ||||||||||    
T  490623 acaacaacaacaacaaacaagccttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatcataaaccatatttggatccaa 490524  T
Q  155 ctcattattctctaaatcttt 175  Q
    ||||| | |||||||||||||    
T  490523 ctcatcaatctctaaatcttt 490503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 113 - 172
Target Start/End: Complemental strand, 29520879 - 29520820
Alignment:
Q  113 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatc 172  Q
    ||||||| |||||||||||||||| |||||| ||||||||||||||||| ||||||||||    
T  29520879 attacgccataatgttctatcataaaccatatttggatccaactcattaatctctaaatc 29520820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 173
Target Start/End: Original strand, 43904717 - 43904777
Alignment:
Q  113 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatct 173  Q
    ||||||| |||||||||||||||| |||||| || |||||||||||||| |||||||||||    
T  43904717 attacgccataatgttctatcataaaccatatttagatccaactcattaatctctaaatct 43904777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 66 - 192
Target Start/End: Complemental strand, 2216568 - 2216439
Alignment:
Q  66 acaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 160  Q
    |||||||| | |||||||||||||||| ||||||| || | ||||||     ||||| |||||||||||||||||| | |||| | ||||||||||||||    
T  2216568 acaacaaccaccaagccttatctcactgagtggggtcggctacatggatcaaattacactataatgttctatcata-aacatattaggatccaactcatt 2216470  T
Q  161 attctctaaatcttttttaatagtttatctta 192  Q
      |||||||||| || |||||||||| |||||    
T  2216469 gatctctaaatc-ttcttaatagtttctctta 2216439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 23492317 - 23492202
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggatt-----acgctataatgttctatcatataccatagttggatccaactcat 159  Q
    ||||||||||| |||||||||||||||||||||||| || | |||||||||     || | ||| |||||||||||||| |||| ||  |||||||||||    
T  23492317 aacaacaacaaacaagccttatctcactaagtggggtcggctacatggattaaatgacaccatagtgttctatcatatatcatatttctatccaactcat 23492218  T
Q  160 tattctctaaatcttt 175  Q
    || || ||| ||||||    
T  23492217 taatcgctacatcttt 23492202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 64 - 186
Target Start/End: Original strand, 25473401 - 25473528
Alignment:
Q  64 aaacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactca 158  Q
    |||||||||||| ||||||||||| |||||||||||| || | ||||||     || |||||||| |||||||||||| |||| | ||||||| ||||||    
T  25473401 aaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgctatagtgttctatcatacaccaaatttggatcaaactca 25473500  T
Q  159 ttattctctaaatcttttttaatagttt 186  Q
    ||   ||||||||| ||| |||| ||||    
T  25473501 ttgacctctaaatcctttctaatggttt 25473528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 121 - 192
Target Start/End: Complemental strand, 30559915 - 30559844
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    |||||||||||||||| ||||||  |||||||||||||||| |||||||||||||  | ||||||| |||||    
T  30559915 ataatgttctatcataaaccatatatggatccaactcattaatctctaaatctttcctgatagtttctctta 30559844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 66 - 192
Target Start/End: Original strand, 35914601 - 35914732
Alignment:
Q  66 acaacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 160  Q
    |||||||||| |||| ||||||||||||||||||| |  | ||||||||     ||||| |||||||||||||||| |||||| || | |||||||||||    
T  35914601 acaacaacaaccaagtcttatctcactaagtggggtcagctacatggatcaaattacgccataatgttctatcataaaccatattttggtccaactcatt 35914700  T
Q  161 attctctaaatcttttttaatagtttatctta 192  Q
    | |||  || |||||  ||||||||| |||||    
T  35914701 aatcttcaagtctttcctaatagtttctctta 35914732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 64 - 186
Target Start/End: Original strand, 45041314 - 45041440
Alignment:
Q  64 aaacaacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactca 158  Q
    ||||| |||||| ||||||||||| |||||||||||| |  | ||||||||     ||||| ||||||  |||||||| |||||| ||||||||||||||    
T  45041314 aaacatcaacaaccaagccttatcccactaagtggggtcagctacatggatcaaattacgccataatgcgctatcataaaccata-ttggatccaactca 45041412  T
Q  159 ttattctctaaatcttttttaatagttt 186  Q
    |||  ||||||||||||  |||||||||    
T  45041413 ttaacctctaaatctttcctaatagttt 45041440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 66 - 192
Target Start/End: Complemental strand, 45419517 - 45419386
Alignment:
Q  66 acaacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 160  Q
    |||||||||| ||||||||||| |||||||||||| || | ||||||||     ||| | |||||||||||||||| |||| | ||||||| ||||||||    
T  45419517 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacaccataatgttctatcataaaccaaatttggatcaaactcatt 45419418  T
Q  161 attctctaaatcttttttaatagtttatctta 192  Q
    ||  | |||| ||||  ||||||||| |||||    
T  45419417 atgatttaaacctttcctaatagtttctctta 45419386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 186
Target Start/End: Original strand, 11523722 - 11523848
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcat 159  Q
    ||||||||||| ||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||| | |||||||||||||||    
T  11523722 aacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcat 11523821  T
Q  160 tattctctaaatcttttttaatagttt 186  Q
    |   ||||||||| ||| |||| ||||    
T  11523822 tgacctctaaatcctttctaatggttt 11523848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 171
Target Start/End: Complemental strand, 31716105 - 31715992
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacg--acatggat-----tacgctataatgttctatcatataccatagttggatccaactc 157  Q
    ||||||||||| ||||||||||| |||||||||| |  ||||  ||||||||     ||||| ||||||||||||| || |||||| ||||||||||||     
T  31716105 aacaacaacaaccaagccttatcccactaagtggtggtgacgctacatggatcaaattacgccataatgttctatcttaaaccatatttggatccaacta 31716006  T
Q  158 attattctctaaat 171  Q
    |||| |||||||||    
T  31716005 attaatctctaaat 31715992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 115 - 192
Target Start/End: Original strand, 17491708 - 17491785
Alignment:
Q  115 tacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    ||||| |||||||||||||||| |||||| || | |||||||||||| |||| || ||||| |||||||||| |||||    
T  17491708 tacgccataatgttctatcataaaccatattttggtccaactcattaatctccaagtctttcttaatagtttctctta 17491785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 192
Target Start/End: Original strand, 35643602 - 35643737
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatggattacgctat---aatgttctatcatataccatagttggatccaact 156  Q
    |||| ||||||||||| ||||| ||||| ||||||||||||  | | |||||||| |   |||   | |||||||||||| |||||| || |||||||||    
T  35643602 acaacaacaacaacaaccaagcattatcccactaagtggggtaggctacatggatcaaaatatggcagtgttctatcataaaccatatttcgatccaact 35643701  T
Q  157 cattattctctaaatcttttttaatagtttatctta 192  Q
    ||||| |||||| |||||| |||||| ||| |||||    
T  35643702 cattaatctctagatctttcttaataatttctctta 35643737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 65 - 192
Target Start/End: Complemental strand, 5908929 - 5908797
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcat 159  Q
    ||||||||||| ||||||||||  |||||| |||| || || ||||||||     ||||| |||| ||||||||||| | |||| || ||||||||||||    
T  5908929 aacaacaacaaccaagccttattccactaattgggtccaactacatggatccaattacgcaataaggttctatcataaatcatattttgatccaactcat 5908830  T
Q  160 tattctctaaatcttttttaatagtttatctta 192  Q
    || ||  |  ||||||||||||||||| |||||    
T  5908829 taatccttggatcttttttaatagtttctctta 5908797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 16917403 - 16917352
Alignment:
Q  123 aatgttctatcatataccatagttggatccaactcattattctctaaatctt 174  Q
    ||||||||||||||||||||| ||  ||||||||||||| ||||||||||||    
T  16917403 aatgttctatcatataccatatttctatccaactcattaatctctaaatctt 16917352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 192
Target Start/End: Original strand, 33827821 - 33827888
Alignment:
Q  125 tgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    |||||||||||| |||||| || ||||||| |||||| ||| ||||| |||||||||||||| |||||    
T  33827821 tgttctatcataaaccatatttagatccaattcattaatctataaatattttttaatagtttctctta 33827888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 65 - 186
Target Start/End: Complemental strand, 36545432 - 36545306
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcat 159  Q
    ||||||||||| ||||||||||| |||||||||||| || | ||||||     || |||  ||| |||||||||||| |||| | |||||||||||||||    
T  36545432 aacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgtcatagtgttctatcatacaccaaatttggatccaactcat 36545333  T
Q  160 tattctctaaatcttttttaatagttt 186  Q
    |   ||||||||| ||| |||| ||||    
T  36545332 tgacctctaaatcctttctaatggttt 36545306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 65 - 186
Target Start/End: Original strand, 42469726 - 42469852
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcat 159  Q
    ||||||||||| ||||||||||| || ||||||||| |  | |||||||| |     ||| ||| |||||||||| | |||||| |||||||||||||||    
T  42469726 aacaacaacaaccaagccttatcccaataagtggggtcagctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcat 42469825  T
Q  160 tattctctaaatcttttttaatagttt 186  Q
    |   ||||||||||||| |||| ||||    
T  42469826 tgacctctaaatcttttctaatggttt 42469852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 186
Target Start/End: Complemental strand, 36069832 - 36069759
Alignment:
Q  113 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 186  Q
    |||||||  ||||||||||||||| |||||| ||  | ||||||||||| ||||||||| ||| ||||||||||    
T  36069832 attacgccgtaatgttctatcataaaccatatttctacccaactcattaatctctaaatatttgttaatagttt 36069759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 186
Target Start/End: Original strand, 38391945 - 38392018
Alignment:
Q  113 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 186  Q
    ||||||| ||||| ||||||||||||||||| || ||||| |||||||| ||| || |||||| ||||| ||||    
T  38391945 attacgccataatattctatcatataccatatttcgatcccactcattaatctgtagatctttcttaatggttt 38392018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 201
Target Start/End: Complemental strand, 12025995 - 12025920
Alignment:
Q  125 tgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatcttaggtcttcat 201  Q
    |||||||||| | |||||| |||||||||||| |||   ||||||||||||| |||| |||| ||||||||||||||    
T  12025995 tgttctatcaaaaaccatatttggatccaacttattgacctctaaatcttttctaatggttt-tcttaggtcttcat 12025920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 192
Target Start/End: Complemental strand, 16705978 - 16705898
Alignment:
Q  113 attacgctataatgttctatc-atataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    ||||||| ||||||||| ||| |||||||||| || |||||||||||||| ||||||  | ||| |||||||||| |||||    
T  16705978 attacgccataatgttccatccatataccatatttcgatccaactcattaatctctagctttttcttaatagtttctctta 16705898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 173
Target Start/End: Complemental strand, 44529507 - 44529395
Alignment:
Q  66 acaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 160  Q
    |||||||||| ||||||||||| |||||||||||| || | ||||||     || | || ||| |||||||||||| |||| | ||||||||||||||||    
T  44529507 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgatgccatagtgttctatcataaaccaaatttggatccaactcatt 44529408  T
Q  161 attctctaaatct 173  Q
       ||||||||||    
T  44529407 gacctctaaatct 44529395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 192
Target Start/End: Complemental strand, 28169614 - 28169543
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    ||||| || ||||||| |||||| ||| ||||||||||||| |||| ||||||||  ||||||||| |||||    
T  28169614 ataatattttatcataaaccatatttgaatccaactcattaatctcaaaatctttcctaatagtttctctta 28169543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 65 - 161
Target Start/End: Complemental strand, 42584641 - 42584541
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatgg----attacgctataatgttctatcatataccatagttggatccaactcatt 160  Q
    ||||||||||| |||| |||||| |||||||||||| || | ||| |     ||||||  |||||||||||||||| |||||| |||||||||| |||||    
T  42584641 aacaacaacaatcaagtcttatcccactaagtggggtcggctacaagatcaaattacgtcataatgttctatcataaaccatatttggatccaaatcatt 42584542  T
Q  161 a 161  Q
    |    
T  42584541 a 42584541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 191
Target Start/End: Original strand, 9904942 - 9905012
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctt 191  Q
    |||||||| ||||||| ||| || || ||||||| |||||| | ||||||||||| |||||||||| ||||    
T  9904942 ataatgttttatcataaaccttattttgatccaaatcattaatttctaaatctttattaatagtttctctt 9905012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 114
Target Start/End: Original strand, 14742076 - 14742130
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatggat 114  Q
    |||| ||||||||||| ||||||||||| |||||||||||| || | ||||||||    
T  14742076 acaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggat 14742130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 189
Target Start/End: Original strand, 35825522 - 35825584
Alignment:
Q  127 ttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatc 189  Q
    |||||||||| || ||| || | | |||||||||| |||||||||||||| ||||||||||||    
T  35825522 ttctatcataaacaatattttggttcaactcattagtctctaaatcttttctaatagtttatc 35825584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 1065008 - 1064955
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatgga 113  Q
    |||| ||||||||||| ||||||||||| |||||||||||| || | |||||||    
T  1065008 acaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatgga 1064955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 133
Target Start/End: Original strand, 1928586 - 1928659
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatc 133  Q
    ||||||||||| ||||||||||| |||||||||||| || | ||||||||     ||||| |||||||||||||    
T  1928586 aacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatc 1928659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 12966381 - 12966434
Alignment:
Q  128 tctatcatataccatagttggatccaactcattattctctaaatcttttttaat 181  Q
    ||||||||| |||||| ||| || |||||||||| ||||||||||||| |||||    
T  12966381 tctatcataaaccatatttgaattcaactcattaatctctaaatctttcttaat 12966434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 116 - 189
Target Start/End: Complemental strand, 27037862 - 27037789
Alignment:
Q  116 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatc 189  Q
    |||| ||||| |||||||| |||||||| ||  ||||||||||||| ||| || ||||||  ||||||||||||    
T  27037862 acgccataatattctatcaaataccatatttctatccaactcattaatctttatatctttcctaatagtttatc 27037789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 113 - 186
Target Start/End: Original strand, 35362702 - 35362775
Alignment:
Q  113 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 186  Q
    ||||||| |||||||||||||||| |||||| ||   |||||||||||| | || ||||||||  |||||||||    
T  35362702 attacgccataatgttctatcatacaccatatttcagtccaactcattaatttccaaatctttcctaatagttt 35362775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 41971850 - 41971915
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 186  Q
    |||||||||||||||| || ||| ||   |||||||||||| ||||||||||||| ||| ||||||    
T  41971850 ataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 41971915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 60 - 160
Target Start/End: Original strand, 44047526 - 44047631
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaa 154  Q
    |||| ||||||||||| ||||||||||| |||||||||||| |  | ||||||     || |||| ||  |||||||||||| |||| | ||||||||||    
T  44047526 acaacaacaacaacaaccaagccttatcccactaagtggggtcagctacatggatcaaatgacgccatggtgttctatcataaaccaaatttggatccaa 44047625  T
Q  155 ctcatt 160  Q
    ||||||    
T  44047626 ctcatt 44047631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 4558202 - 4558242
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtgggg 100  Q
    |||| ||||||||||| ||||||||||| ||||||||||||    
T  4558202 acaagaacaacaacaaccaagccttatcccactaagtgggg 4558242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 192
Target Start/End: Original strand, 10079970 - 10080038
Alignment:
Q  124 atgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    ||||||||||| ||| |||| ||  ||||||||||||| |||||| |||||| |||| ||||| |||||    
T  10079970 atgttctatcaaatatcatatttctatccaactcattaatctctagatctttcttaacagtttttctta 10080038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 24837979 - 24837939
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtgggg 100  Q
    |||| ||||||||||| ||||||||||| ||||||||||||    
T  24837979 acaacaacaacaacaaccaagccttatcccactaagtgggg 24837939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 32043875 - 32043835
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtgggg 100  Q
    |||| ||||||||||| ||||||||||| ||||||||||||    
T  32043875 acaacaacaacaacaatcaagccttatcccactaagtgggg 32043835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 201
Target Start/End: Complemental strand, 33076346 - 33076268
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatcttaggtcttcat 201  Q
    ||||| |||||| ||| |||||| || | | |||||||||| ||||||||||| |||||||||||| || |||||||||||    
T  33076346 ataatattctattataaaccatattttggtacaactcattaatctctaaatct-ttttaatagtttttc-taggtcttcat 33076268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 2e-23; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 66 - 192
Target Start/End: Original strand, 40979928 - 40980059
Alignment:
Q  66 acaacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 160  Q
    |||||||||| ||||||||||| |||||||||||| || | ||||||||     ||||| ||| |||||||||||| |||||| ||||||||||||||||    
T  40979928 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccatagtgttctatcataaaccatatttggatccaactcatt 40980027  T
Q  161 attctctaaatcttttttaatagtttatctta 192  Q
       ||||||||||||| ||||||||| |||||    
T  40980028 gacctctaaatcttttctaatagtttctctta 40980059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 36101776 - 36101891
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcat 159  Q
    ||||||||||| ||||||||||| |||||||||||| | || ||||||||     ||||  |||||||||||||||| |||||| || ||||||||||||    
T  36101776 aacaacaacaaccaagccttatcccactaagtggggtcaactacatggatcaaattacgtcataatgttctatcataaaccatattttgatccaactcat 36101875  T
Q  160 tattctctaaatcttt 175  Q
    || ||| |||||||||    
T  36101876 taatctataaatcttt 36101891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 62 - 187
Target Start/End: Complemental strand, 27649066 - 27648936
Alignment:
Q  62 aaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaact 156  Q
    |||||||||||||| ||||||||||| |||||||||||| || | ||||||||     ||||| | | |||||||||||| |||| | ||||||||||||    
T  27649066 aaaaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccacagtgttctatcataaaccaaatttggatccaact 27648967  T
Q  157 cattattctctaaatcttttttaatagttta 187  Q
    ||||   ||||||||||||| |||| |||||    
T  27648966 cattgacctctaaatcttttctaatggttta 27648936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 28627936 - 28628064
Alignment:
Q  69 acaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattatt 163  Q
    |||||||  |||||||||| |||||||||| | || | ||||||||     ||||| |||||||||||||||| |||| | ||| ||||||||||||| |    
T  28627936 acaacaactaagccttatcccactaagtggagtcggctacatggatcaaattacgccataatgttctatcataaaccacatttgcatccaactcattaat 28628035  T
Q  164 ctctaaatcttttttaatagtttatctta 192  Q
    ||||||||||||  ||||||||| |||||    
T  28628036 ctctaaatctttcctaatagtttctctta 28628064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 124 - 199
Target Start/End: Original strand, 28542007 - 28542081
Alignment:
Q  124 atgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatcttaggtcttc 199  Q
    ||||||||||||| |||||||||  ||||||||||||| ||||||||||||| |||||||||| || |||||||||    
T  28542007 atgttctatcataaaccatagttcaatccaactcattaatctctaaatctttcttaatagtttttc-taggtcttc 28542081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 113 - 192
Target Start/End: Original strand, 38135265 - 38135344
Alignment:
Q  113 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    ||||||| ||||| ||||||||||  ||||| || | |||||||||||| |||||||||||||||||||||||| |||||    
T  38135265 attacgccataatattctatcataacccatatttcggtccaactcattaatctctaaatcttttttaatagtttctctta 38135344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 37976457 - 37976403
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttt 175  Q
    |||||||||||||||| |||||| ||||||||||||||||| |||||||||||||    
T  37976457 ataatgttctatcataaaccatatttggatccaactcattaatctctaaatcttt 37976403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 185
Target Start/End: Complemental strand, 1569246 - 1569174
Alignment:
Q  113 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtt 185  Q
    |||||||  ||||||||||||||| |||||| || |||||||||||||| |||||| |||||| |||||||||    
T  1569246 attacgccgtaatgttctatcataaaccatattttgatccaactcattaatctctagatctttcttaatagtt 1569174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 192
Target Start/End: Original strand, 9210703 - 9210835
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcat 159  Q
    |||||||||||  |||||||||| |||||||||||| |  | ||||||||     ||||| |||||||| ||||||| |||||| |||||||||||||||    
T  9210703 aacaacaacaacgaagccttatcccactaagtggggtcagctacatggatcaaattacgccataatgttgtatcataaaccatatttggatccaactcat 9210802  T
Q  160 tattctctaaatcttttttaatagtttatctta 192  Q
    ||  |||||||| |||  ||| ||||| |||||    
T  9210803 taacctctaaatttttcctaaaagtttctctta 9210835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 199
Target Start/End: Complemental strand, 32631852 - 32631709
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaa 154  Q
    |||| ||||||||||| ||||||||||| |||||||||||| || | |||| ||| |     ||| |||  ||||||||| | |||||| ||||||||||    
T  32631852 acaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatagatcaaatgacgccatagcgttctatcaaaaaccatatttggatccaa 32631753  T
Q  155 ctcattattctctaaatcttttttaatagtttatcttaggtcttc 199  Q
    ||||||   ||||||||||||| |||| |||| ||||||||||||    
T  32631752 ctcattgacctctaaatcttttctaatggttt-tcttaggtcttc 32631709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 121 - 192
Target Start/End: Original strand, 21517440 - 21517511
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    |||||||| ||||||| | |||| |||||||||||| |||| ||||||||| |||||||||||||| |||||    
T  21517440 ataatgttatatcataaatcatatttggatccaacttattaatctctaaatattttttaatagtttctctta 21517511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 60 - 186
Target Start/End: Complemental strand, 22349908 - 22349777
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaa 154  Q
    |||| ||||||||||| ||||||||||| |||||||||||| |||| ||||||     || |||| ||| | ||||||||||||||| | ||||||||||    
T  22349908 acaacaacaacaacaatcaagccttatcccactaagtggggtcgactacatggatcaaatgacgccatagtattctatcatataccaaatttggatccaa 22349809  T
Q  155 ctcattattctctaaatcttttttaatagttt 186  Q
    || |||   || |||||| |||||||| ||||    
T  22349808 cttattgacctttaaatcctttttaatggttt 22349777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 27893557 - 27893688
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaa 154  Q
    |||| ||||||||||| ||||||||||| |||||||| ||| || | ||||| ||     || || |||||||||||||||| | |||| || | ||||     
T  27893557 acaacaacaacaacaaccaagccttatcgcactaagtagggtcggctacatgaatcaaattatgccataatgttctatcataaaacatatttcggtccag 27893656  T
Q  155 ctcattattctctaaatcttttttaatagttt 186  Q
    ||||||| ||||||||||||| ||||||||||    
T  27893657 ctcattaatctctaaatctttcttaatagttt 27893688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 113 - 192
Target Start/End: Original strand, 36239848 - 36239927
Alignment:
Q  113 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    ||||||| |||||||||||||||| | |||| ||||||||||||| ||| ||||||||| |||  ||||||||| |||||    
T  36239848 attacgccataatgttctatcataaagcatatttggatccaactcgttaatctctaaatttttcctaatagtttctctta 36239927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 186
Target Start/End: Complemental strand, 11594243 - 11594117
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcat 159  Q
    ||||||||||| ||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||| | |||||||||||||||    
T  11594243 aacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcat 11594144  T
Q  160 tattctctaaatcttttttaatagttt 186  Q
    |   ||||||||| ||| |||| ||||    
T  11594143 tgacctctaaatcctttctaatggttt 11594117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 186
Target Start/End: Complemental strand, 43281957 - 43281831
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcat 159  Q
    ||||||||||| |||||||| || |||||||||||| || | |||||||| |     ||| ||| |||||||||| | |||||| |||||||||||||||    
T  43281957 aacaacaacaaccaagccttgtcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcat 43281858  T
Q  160 tattctctaaatcttttttaatagttt 186  Q
    |   ||||||||||||| |||| ||||    
T  43281857 tgacctctaaatcttttctaatggttt 43281831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 186
Target Start/End: Original strand, 45836481 - 45836607
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcat 159  Q
    ||||||||||| | ||||||||| |||||||||||| || | |||||||| |     ||| ||| |||||||||||| |||||| |||||||||||||||    
T  45836481 aacaacaacaaccgagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccatatttggatccaactcat 45836580  T
Q  160 tattctctaaatcttttttaatagttt 186  Q
    |   ||||||||| ||| |||| ||||    
T  45836581 tgacctctaaatcctttctaatggttt 45836607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 170
Target Start/End: Original strand, 5577547 - 5577596
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaa 170  Q
    |||||||||||||||| |||||| ||||||||||||||||| ||||||||    
T  5577547 ataatgttctatcataaaccatacttggatccaactcattagtctctaaa 5577596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 156
Target Start/End: Original strand, 28208322 - 28208423
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaa 154  Q
    |||| ||||||||||| ||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||||| ||||||||||    
T  28208322 acaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccatatttggatccaa 28208421  T
Q  155 ct 156  Q
    ||    
T  28208422 ct 28208423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 192
Target Start/End: Complemental strand, 42187724 - 42187592
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataa-tgttctatcatataccatagttggatccaactca 158  Q
    |||||||||||  |||||||||| |||||||||||| || | ||||||||     ||||| |||| |||||||||||| |||| | |||||||||||| |    
T  42187724 aacaacaacaacaaagccttatcccactaagtggggtcggctacatggatcaaattacgccataaatgttctatcataaacca-atttggatccaactaa 42187626  T
Q  159 ttattctctaaatcttttttaatagtttatctta 192  Q
    ||| ||||||||| |||  ||||||||| |||||    
T  42187625 ttaatctctaaatatttcctaatagtttctctta 42187592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 65 - 160
Target Start/End: Original strand, 2885721 - 2885821
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcat 159  Q
    ||||||||||| ||||||||||| |||||||||||| || | ||||||||     ||| | ||| |||||||||||| |||||| |||| ||||||||||    
T  2885721 aacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacaccatagtgttctatcataaaccatatttgggtccaactcat 2885820  T
Q  160 t 160  Q
    |    
T  2885821 t 2885821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 60 - 199
Target Start/End: Complemental strand, 38607280 - 38607137
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaa 154  Q
    |||| ||||||||||| ||||||||| | |||||||||| | || | |||||||| |     ||| ||| |||||||||| | |||||| ||||||||||    
T  38607280 acaacaacaacaacaaccaagccttaacccactaagtggagtcggctacatggatcaaacgacgccatagtgttctatcaaaaaccatatttggatccaa 38607181  T
Q  155 ctcattattctctaaatcttttttaatagtttatcttaggtcttc 199  Q
    ||||||   ||||||||| ||| |||| |||| ||||||||||||    
T  38607180 ctcattgacctctaaatcctttctaatggttt-tcttaggtcttc 38607137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 44855168 - 44855297
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaa 154  Q
    |||| ||||||||||| ||||||||||| |||||||||||| || | ||||||     ||||||| ||| |||  ||||||| |||| | ||||||||||    
T  44855168 acaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggaccaaattacgccatagtgt--tatcataaaccaaatttggatccaa 44855265  T
Q  155 ctcattattctctaaatcttttttaatagttt 186  Q
    ||||||   ||||||||||||| |||| ||||    
T  44855266 ctcattgacctctaaatcttttctaatggttt 44855297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 12841269 - 12841400
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaa 154  Q
    |||| ||||||||||| ||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||| | |||||| |||    
T  12841269 acaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccaaatttggatacaa 12841368  T
Q  155 ctcattattctctaaatcttttttaatagttt 186  Q
    ||||||   ||||||||| ||| |||| ||||    
T  12841369 ctcattgacctctaaatcctttctaatggttt 12841400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 186
Target Start/End: Complemental strand, 29650672 - 29650541
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaa 154  Q
    |||| ||||||||||| ||||||||||| |||||||||||| || | ||||||     || ||||  || |||||||||| | |||||| ||||||| ||    
T  29650672 acaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccttagtgttctatcaaaaaccatatttggatcaaa 29650573  T
Q  155 ctcattattctctaaatcttttttaatagttt 186  Q
    ||||||   ||||||||||||| |||| ||||    
T  29650572 ctcattgacctctaaatcttttctaatggttt 29650541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 180
Target Start/End: Complemental strand, 33732114 - 33731997
Alignment:
Q  66 acaacaacaagcaagccttatctcactaagtggggccgacgacatggatta---cgctataatgttctatcatataccatagttggatccaactcattat 162  Q
    |||||||||| ||||||||||| ||||||||||| ||| | |||||||| |    || |||||||||||||||| |||||| || ||||  ||||||||     
T  33732114 acaacaacaaccaagccttatcccactaagtgggaccggctacatggatcaaattgccataatgttctatcataaaccatatttcgatctcactcattaa 33732015  T
Q  163 tctctaaatcttttttaa 180  Q
    ||| || |||||| ||||    
T  33732014 tctttagatctttcttaa 33731997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 192
Target Start/End: Complemental strand, 36136994 - 36136915
Alignment:
Q  113 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    ||||| |||||||||||||||||| |||||| |||||||||| ||||||   |||||||||||   |||||||| |||||    
T  36136994 attaccctataatgttctatcataaaccatatttggatccaattcattaacatctaaatctttccaaatagtttctctta 36136915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 65 - 186
Target Start/End: Original strand, 39906371 - 39906497
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcat 159  Q
    ||||||||||| ||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||| | |||||||||| ||||    
T  39906371 aacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaagtcat 39906470  T
Q  160 tattctctaaatcttttttaatagttt 186  Q
    |   ||||||||| ||| |||| ||||    
T  39906471 tgacctctaaatcctttctaatggttt 39906497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 24549754 - 24549819
Alignment:
Q  127 ttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    |||||||| |||||||| ||  ||||||||||||| |||||| |||||| |||||||||| |||||    
T  24549754 ttctatcaaataccatatttcaatccaactcattaatctctagatctttcttaatagtttctctta 24549819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 35922475 - 35922410
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 186  Q
    |||||||||||||||| | |||| || ||| ||||||||||  |||||||||||| ||||||||||    
T  35922475 ataatgttctatcataaatcatatttagattcaactcattaacctctaaatctttcttaatagttt 35922410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 175
Target Start/End: Complemental strand, 21078201 - 21078085
Alignment:
Q  64 aaacaacaacaagcaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactca 158  Q
    |||||||||||| ||||||||||| |||||| ||  | || | |||||||| |     ||| |||||||||||||||| |||| | ||||||||||||||    
T  21078201 aaacaacaacaaccaagccttatcccactaaatgaagtcggctacatggatcaaatgacgccataatgttctatcatacaccaaatttggatccaactca 21078102  T
Q  159 ttattctctaaatcttt 175  Q
    ||   ||||||||||||    
T  21078101 ttgacctctaaatcttt 21078085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 192
Target Start/End: Complemental strand, 12966238 - 12966167
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    |||||| | |||||||||||||| ||  |||||| |||||| ||||||||| ||| |||||||||| |||||    
T  12966238 ataatgatttatcatataccatatttctatccaaatcattaatctctaaatatttcttaatagtttctctta 12966167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 192
Target Start/End: Complemental strand, 14057700 - 14057629
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    |||||||||||||||| |||||| ||| ||| ||| |||||  ||||||||||||  ||||||||| |||||    
T  14057700 ataatgttctatcataaaccatatttgaatcgaacgcattaacctctaaatctttcctaatagtttctctta 14057629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 192
Target Start/End: Complemental strand, 14367728 - 14367657
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    |||||||||||||||| |||||| ||| ||| ||| |||||  ||||||||||||  ||||||||| |||||    
T  14367728 ataatgttctatcataaaccatatttgaatcgaacgcattaacctctaaatctttcctaatagtttctctta 14367657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 31682596 - 31682727
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaa 154  Q
    |||| ||||||||||| ||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||| |  |||||||||    
T  31682596 acaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccaaatatggatccaa 31682695  T
Q  155 ctcattattctctaaatcttttttaatagttt 186  Q
     |||||   ||||||||| ||| |||| ||||    
T  31682696 ttcattgacctctaaatcctttctaatggttt 31682727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 61 - 100
Target Start/End: Original strand, 33650865 - 33650904
Alignment:
Q  61 caaaaacaacaacaagcaagccttatctcactaagtgggg 100  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  33650865 caaaaacaacaacaaccaagccttatcccactaagtgggg 33650904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 59 - 114
Target Start/End: Complemental strand, 43491597 - 43491542
Alignment:
Q  59 gacaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatggat 114  Q
    ||||| ||||||||||| ||||||||||| |||||||||||| || | ||||||||    
T  43491597 gacaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggat 43491542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 125 - 192
Target Start/End: Complemental strand, 45601694 - 45601627
Alignment:
Q  125 tgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    |||||||||||| | |||| || |||||||||||||| |||||| |||||| ||||| |||| |||||    
T  45601694 tgttctatcataaatcatattttgatccaactcattaatctctagatctttcttaatggtttctctta 45601627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 161
Target Start/End: Complemental strand, 1011330 - 1011229
Alignment:
Q  64 aaacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactca 158  Q
    |||||||||||| ||||||||||| |||||||||||| || | |||| |     ||||| | ||||||||||||| || |||||| |||||||||| |||    
T  1011330 aaacaacaacaaccaagccttatcccactaagtggggtcggctacatagatcaaattacaccataatgttctatcctaaaccata-ttggatccaaatca 1011232  T
Q  159 tta 161  Q
    |||    
T  1011231 tta 1011229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 187
Target Start/End: Complemental strand, 5418288 - 5418223
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttta 187  Q
    |||||||||||||||| |||||| || | ||||||||||||  |||| ||||||| |||||||||||    
T  5418288 ataatgttctatcataaaccatatttcggtccaactcatta-actcttaatctttcttaatagttta 5418223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 114
Target Start/End: Complemental strand, 7273384 - 7273334
Alignment:
Q  64 aaacaacaacaagcaagccttatctcactaagtggggccgacgacatggat 114  Q
    |||||||||||| ||||||||||| |||||||||||| || | ||||||||    
T  7273384 aaacaacaacaatcaagccttatcccactaagtggggtcggctacatggat 7273334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 103
Target Start/End: Complemental strand, 20899454 - 20899416
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccg 103  Q
    ||||||||||| ||||||||||| |||||||||||||||    
T  20899454 aacaacaacaaccaagccttatcccactaagtggggccg 20899416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 100
Target Start/End: Original strand, 21244279 - 21244317
Alignment:
Q  62 aaaaacaacaacaagcaagccttatctcactaagtgggg 100  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  21244279 aaaaacaacaacaaccaagccttatcccactaagtgggg 21244317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 191
Target Start/End: Original strand, 26741946 - 26742024
Alignment:
Q  113 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctt 191  Q
    ||||||| |||||||||||||||| |||||| || | |||||||||||  | || |||| |||  ||||||||||||||    
T  26741946 attacgccataatgttctatcataaaccatatttcggtccaactcatttatttccaaatatttcctaatagtttatctt 26742024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 28562423 - 28562497
Alignment:
Q  119 ctataatgttctatcatata-ccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    |||||||||| ||||||| | ||||| | ||||||||||| ||| |||||||||||||  ||||||||| |||||    
T  28562423 ctataatgttatatcataaaaccatattaggatccaactcgttaatctctaaatctttcataatagtttctctta 28562497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 114
Target Start/End: Complemental strand, 31005493 - 31005439
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatggat 114  Q
    |||| ||||||||||| ||||||||||| |||||||||||| || | ||||||||    
T  31005493 acaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggat 31005439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 114
Target Start/End: Original strand, 31869096 - 31869150
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatggat 114  Q
    |||| ||||||||||| ||||||||||| |||||||||||| || | ||||||||    
T  31869096 acaagaacaacaacaaccaagccttatcccactaagtggggtcggctacatggat 31869150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 186
Target Start/End: Complemental strand, 37618228 - 37618102
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcat 159  Q
    ||||||||||| ||||||||||| |||||||||||| || | ||||||     || || | ||| |||||||||||| |||| | |||||||||||| ||    
T  37618228 aacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacaccatagtgttctatcatacaccaaatttggatccaacttat 37618129  T
Q  160 tattctctaaatcttttttaatagttt 186  Q
    |   ||||||||| ||| |||| ||||    
T  37618128 tgacctctaaatcctttctaatggttt 37618102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 42969920 - 42969870
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaat 171  Q
    ||||||||| |||||| |||||| |||||||||||||||||  ||||||||    
T  42969920 ataatgttcaatcataaaccatatttggatccaactcattaacctctaaat 42969870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 114
Target Start/End: Original strand, 46355858 - 46355904
Alignment:
Q  68 aacaacaagcaagccttatctcactaagtggggccgacgacatggat 114  Q
    |||||||| |||||||||||||||||||||||| || | ||||||||    
T  46355858 aacaacaaccaagccttatctcactaagtggggtcggctacatggat 46355904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 47848895 - 47848841
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttt 175  Q
    |||||||||||||||| |||||| ||||||||| ||||||| || | ||||||||    
T  47848895 ataatgttctatcataaaccatatttggatccagctcattaatccccaaatcttt 47848841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 113 - 190
Target Start/End: Original strand, 2882788 - 2882865
Alignment:
Q  113 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatct 190  Q
    ||||||| |||||||||||||||| |||||  || |||||||||||||| | || |||  |||  |||||||||||||    
T  2882788 attacgccataatgttctatcataaaccatgtttcgatccaactcattaatttccaaaggtttcctaatagtttatct 2882865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 5418357 - 5418308
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggat 114  Q
    ||||||||||| ||||||||||| |||||| ||||| |||| ||||||||    
T  5418357 aacaacaacaaccaagccttatcccactaaatggggtcgactacatggat 5418308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 32368407 - 32368468
Alignment:
Q  131 atcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    ||||||||||||| || ||||||||||| || ||||||||||||  ||||||| || |||||    
T  32368407 atcatataccatatttcgatccaactcactaatctctaaatcttccttaatagcttctctta 32368468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 69 - 114
Target Start/End: Complemental strand, 39812217 - 39812172
Alignment:
Q  69 acaacaagcaagccttatctcactaagtggggccgacgacatggat 114  Q
    ||||||| ||||||||||| |||||||||||||| || ||||||||    
T  39812217 acaacaaccaagccttatcccactaagtggggccaactacatggat 39812172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 161
Target Start/End: Complemental strand, 47852358 - 47852269
Alignment:
Q  77 caagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatta 161  Q
    ||||||||||| | |||||||||| || | ||||||||     ||||| |||||||||||| ||| |||| | |||||||||||||||||    
T  47852358 caagccttatccccctaagtggggtcggctacatggatcaaattacgccataatgttctatgatacaccacatttggatccaactcatta 47852269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 66 - 186
Target Start/End: Complemental strand, 48919394 - 48919269
Alignment:
Q  66 acaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 160  Q
    |||||||||| ||||||||||| || ||||||||| |||| ||||||     || |||| ||| || | ||||||| |||||| ||||||| ||||||||    
T  48919394 acaacaacaaccaagccttatcccattaagtggggtcgactacatggatcaaatgacgccatagtggtttatcataaaccatatttggatcaaactcatt 48919295  T
Q  161 attctctaaatcttttttaatagttt 186  Q
       ||||||||| ||| |||| ||||    
T  48919294 gacctctaaatcatttctaatggttt 48919269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 22174227 - 22174151
Alignment:
Q  116 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    |||| |||||||||||||| |||||||| ||  ||| || |||||| |||||| |||||| || ||||||| |||||    
T  22174227 acgccataatgttctatcacataccatatttctatctaattcattaatctctagatctttgtttatagtttctctta 22174151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 186
Target Start/End: Original strand, 35559050 - 35559118
Alignment:
Q  118 gctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 186  Q
    |||||||||||||| |||| || | | ||||||||||||||||   ||||||||||||| |||| ||||    
T  35559050 gctataatgttctaccataaactaaatttggatccaactcattgacctctaaatcttttctaatggttt 35559118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 35725565 - 35725605
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtgggg 100  Q
    |||| ||||||||||| ||||||||||| ||||||||||||    
T  35725565 acaacaacaacaacaaccaagccttatcccactaagtgggg 35725605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 40169884 - 40169805
Alignment:
Q  114 ttacgctataatgttctatcatataccata-gttggatccaactcattattctctaaatcttttttaatagtttatcttag 193  Q
    ||||||| ||||||||||||||| |||||| ||||| ||||||| | || ||||| | ||||| |||||||||| ||||||    
T  40169884 ttacgctgtaatgttctatcatagaccatatgttgg-tccaactaactaatctctgagtctttcttaatagtttctcttag 40169805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 192
Target Start/End: Original strand, 44401187 - 44401256
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    |||||||||||||||| | |||| || |||  ||||| ||| ||||||||||||| |||||||||| |||||    
T  44401187 ataatgttctatcataaaacatattttgat--aactcgttaatctctaaatctttcttaatagtttctctta 44401256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 47413709 - 47413749
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtgggg 100  Q
    |||| ||||||||||| ||||||||||| ||||||||||||    
T  47413709 acaacaacaacaacaaccaagccttatcccactaagtgggg 47413749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 1e-21; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 65 - 192
Target Start/End: Complemental strand, 41560512 - 41560380
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcat 159  Q
    ||||||||||| ||||||||||| |||||||||||| || | ||||||||     ||||| ||||||||||||||||  ||||| |||||||||||||||    
T  41560512 aacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatcataacccatatttggatccaactcat 41560413  T
Q  160 tattctctaaatcttttttaatagtttatctta 192  Q
    || ||||||||| | |  ||||||||| |||||    
T  41560412 taatctctaaatgtatcctaatagtttctctta 41560380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 65 - 192
Target Start/End: Complemental strand, 8796492 - 8796360
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcat 159  Q
    ||||||||||| ||||||||||| |||||||||||| || | ||||||||||     ||| |||||||||||||||| |||||| ||  |||||| ||||    
T  8796492 aacaacaacaaccaagccttatcccactaagtggggtcggctacatggattaaattacgccataatgttctatcataaaccatatttcaatccaagtcat 8796393  T
Q  160 tattctctaaatcttttttaatagtttatctta 192  Q
    || | |||| |||||| |||||||||| |||||    
T  8796392 taatatctagatctttcttaatagtttctctta 8796360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 65 - 192
Target Start/End: Original strand, 11941579 - 11941711
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcat 159  Q
    ||||||||||| |||||| |||| ||||||||| ||||||| ||||||||     ||||| |||||||| ||||||| |||||| |  |||||||||||     
T  11941579 aacaacaacaaccaagccgtatcccactaagtgaggccgactacatggatcaaaatacgccataatgttttatcataaaccatactccgatccaactcaa 11941678  T
Q  160 tattctctaaatcttttttaatagtttatctta 192  Q
    || |||||||||||||| |||||| || |||||    
T  11941679 taatctctaaatcttttctaatagcttctctta 11941711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 199
Target Start/End: Original strand, 36623883 - 36624021
Alignment:
Q  64 aaacaacaacaagcaagccttatctcactaagtggggccgacgacatggat---tac-gctataatgttctatcatataccatagttggatccaactcat 159  Q
    ||||||| ||||  |||||||||| |||||||| ||| |||| ||||||||   ||| || ||||||||| ||| || |||||| |||||||||||||||    
T  36623883 aaacaacgacaacaaagccttatcccactaagtagggtcgactacatggatcattacagccataatgttcgatcctaaaccatatttggatccaactcat 36623982  T
Q  160 tattctctaaatcttttttaatagtttatcttaggtcttc 199  Q
    ||  ||||||||||||| ||||||||| || |||||||||    
T  36623983 tagcctctaaatcttttctaatagtttctc-taggtcttc 36624021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 67 - 192
Target Start/End: Complemental strand, 29129065 - 29128934
Alignment:
Q  67 caacaacaagcaagccttatctcactaagtggggccgacgacatgg------attacgctataatgttctatcatataccatagttggatccaactcatt 160  Q
    |||||| || |||||||||||||||||||||||| || | ||||||      ||||| | |||||||||||||||| |||||| ||||||||||||  ||    
T  29129065 caacaaaaaccaagccttatctcactaagtggggtcggctacatgggatcatattacaccataatgttctatcataaaccatatttggatccaacttgtt 29128966  T
Q  161 attctctaaatcttttttaatagtttatctta 192  Q
    |  ||||||||||||  ||||||||| |||||    
T  29128965 aacctctaaatctttcctaatagtttctctta 29128934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 65 - 192
Target Start/End: Original strand, 38807670 - 38807802
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatgga-----ttacgctataatgttctatcatataccatagttggatccaactcat 159  Q
    ||||||||||| ||||||||||| |||||||||||| || | |||||||     |||||| ||| |||||||||||| |||||| ||||||||||||| |    
T  38807670 aacaacaacaaccaagccttatcccactaagtggggtcggctacatggaacaaattacgccatagtgttctatcataaaccatatttggatccaactcgt 38807769  T
Q  160 tattctctaaatcttttttaatagtttatctta 192  Q
    |   ||||||||| ||| |||| |||| |||||    
T  38807770 tgacctctaaatcctttctaatggtttctctta 38807802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 25979225 - 25979356
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaa 154  Q
    |||| ||||||||||| ||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||||| ||||||||||    
T  25979225 acaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccatatttggatccaa 25979324  T
Q  155 ctcattattctctaaatcttttttaatagttt 186  Q
    ||||||   ||||||||| ||| |||| ||||    
T  25979325 ctcattgacctctaaatcctttctaatggttt 25979356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 172
Target Start/End: Original strand, 4707220 - 4707331
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatgg----attacgctataatgttctatcatataccatagttggatccaactcatt 160  Q
    ||||||||||| ||||||||||| |||||||||||| || | |||||     ||||||| ||| |||||||||||| |||| | ||||||||||||||||    
T  4707220 aacaacaacaaccaagccttatcccactaagtggggtcggctacatgatcaaattacgccatagtgttctatcataaaccaaatttggatccaactcatt 4707319  T
Q  161 attctctaaatc 172  Q
    |  |||||||||    
T  4707320 aacctctaaatc 4707331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 170
Target Start/End: Original strand, 19908040 - 19908144
Alignment:
Q  71 aacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattattct 165  Q
    ||||| ||||||||||| |||||||||||| || | ||||||||     ||||| ||||||||| |||||| |||||| ||| ||||||||||||| |||    
T  19908040 aacaatcaagccttatcccactaagtggggtcggctacatggataaaattacgcaataatgttcaatcataaaccatatttgaatccaactcattaatct 19908139  T
Q  166 ctaaa 170  Q
    |||||    
T  19908140 ctaaa 19908144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 52532619 - 52532747
Alignment:
Q  69 acaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattatt 163  Q
    ||||||| |||||||| || |||||||||||| || | ||||| ||     ||||| |||||||||||||||| |||||| || | |||||||||||| |    
T  52532619 acaacaaccaagccttttcccactaagtggggtcggctacatgaatcaaattacgccataatgttctatcataaaccatattttgttccaactcattaat 52532718  T
Q  164 ctctaaatcttttttaatagtttatctta 192  Q
     |||||||||||  ||||||||| |||||    
T  52532719 ttctaaatctttcctaatagtttctctta 52532747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 121 - 192
Target Start/End: Original strand, 27520267 - 27520338
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    |||||||||||||||| | |||| ||||||||| ||||||| ||||||||| |||| ||||||||| |||||    
T  27520267 ataatgttctatcataaatcatatttggatccagctcattaatctctaaattttttctaatagtttctctta 27520338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 30202124 - 30202255
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaa 154  Q
    |||| ||||||||||| ||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||| | ||||||||||    
T  30202124 acaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaa 30202223  T
Q  155 ctcattattctctaaatcttttttaatagttt 186  Q
    ||||||   ||||||||| ||| |||| ||||    
T  30202224 ctcattgacctctaaatcctttctaatggttt 30202255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 121 - 192
Target Start/End: Complemental strand, 40416593 - 40416522
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    |||||||||||||||| |||||| || |||||||||||||| ||| || |||||| |||||||||| |||||    
T  40416593 ataatgttctatcataaaccatatttcgatccaactcattaatctatagatctttcttaatagtttgtctta 40416522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 186
Target Start/End: Complemental strand, 1211028 - 1210902
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcat 159  Q
    ||||||||||| ||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||| | |||||||||||||||    
T  1211028 aacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcat 1210929  T
Q  160 tattctctaaatcttttttaatagttt 186  Q
    |   ||||||||| ||| |||| ||||    
T  1210928 tgacctctaaatcctttctaatggttt 1210902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 186
Target Start/End: Original strand, 37311754 - 37311880
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcat 159  Q
    ||||||||||| |||||||| || |||||||||||| || | |||||||| |     ||| ||| |||||||||| | |||||| |||||||||||||||    
T  37311754 aacaacaacaaccaagccttttcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcat 37311853  T
Q  160 tattctctaaatcttttttaatagttt 186  Q
    |   ||||||||||||| |||| ||||    
T  37311854 tgacctctaaatcttttctaatggttt 37311880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 67 - 192
Target Start/End: Original strand, 52561590 - 52561720
Alignment:
Q  67 caacaacaagcaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcatta 161  Q
    ||||||||| ||||||||||| |||||||||||| || | |||||||| |     ||| ||||||||||| |  | |||||| |||||||||||||||||    
T  52561590 caacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatttcgccataatgttctacccgaaaccatatttggatccaactcatta 52561689  T
Q  162 ttctctaaatcttttttaatagtttatctta 192  Q
      ||||||||||||  ||| ||||| |||||    
T  52561690 acctctaaatctttcctaacagtttctctta 52561720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 153
Target Start/End: Original strand, 28090693 - 28090786
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatcca 153  Q
    ||||||||||| |||| |||||| |||||||||||| || | ||||||||     ||||| |||||||||||||||| |||||| |||||||||    
T  28090693 aacaacaacaaccaagtcttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatcataaaccatatttggatcca 28090786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 168
Target Start/End: Complemental strand, 34444644 - 34444531
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaa 154  Q
    |||| ||||||||||| ||||||||||| |||||||||||| || | |||| |     ||||| | |||||||| ||| ||| |||||| ||||||||||    
T  34444644 acaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatagatcaaattacaccataatgttttattataaaccatatttggatccaa 34444545  T
Q  155 ctcattattctcta 168  Q
    ||||||| ||||||    
T  34444544 ctcattaatctcta 34444531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 186
Target Start/End: Original strand, 49347393 - 49347518
Alignment:
Q  66 acaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 160  Q
    |||||||||| ||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||| | ||||||||||||||||    
T  49347393 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcatt 49347492  T
Q  161 attctctaaatcttttttaatagttt 186  Q
       ||||||||| ||| |||| ||||    
T  49347493 gacctctaaatcctttctaatggttt 49347518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 186
Target Start/End: Complemental strand, 52921362 - 52921237
Alignment:
Q  66 acaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 160  Q
    |||||||||| ||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||||| |||||||||| |||||    
T  52921362 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgcaatagtgttctatcataaaccatatttggatccaattcatt 52921263  T
Q  161 attctctaaatcttttttaatagttt 186  Q
       ||||||||| ||| |||| ||||    
T  52921262 gacctctaaatcctttctaatggttt 52921237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 184
Target Start/End: Original strand, 10200369 - 10200429
Alignment:
Q  124 atgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagt 184  Q
    ||||||||||||| |||||| |||||||||||||||   |||||||||||||| |||||||    
T  10200369 atgttctatcataaaccatatttggatccaactcatcgatctctaaatcttttctaatagt 10200429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 65 - 192
Target Start/End: Original strand, 32404526 - 32404657
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcat 159  Q
    ||||||||||| || |||||||| |||||||||||| || | ||||||||     ||||| || ||||| ||||||| |||||  ||||||  |||||||    
T  32404526 aacaacaacaacca-gccttatcccactaagtggggtcggctacatggatcaaattacgccattatgttatatcataaaccatgtttggatttaactcat 32404624  T
Q  160 tattctctaaatcttttttaatagtttatctta 192  Q
    || |||||||||||||  ||||||||| |||||    
T  32404625 taatctctaaatctttcctaatagtttctctta 32404657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 65 - 192
Target Start/End: Complemental strand, 39318411 - 39318280
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcat 159  Q
    ||||||||||| ||||||||||| ||||||| ||| | | | ||||||||     ||||| ||| |||||||||||| |||||| |||||||||||||||    
T  39318411 aacaacaacaaacaagccttatcccactaagcgggtcgg-ctacatggatcaaattacgccatagtgttctatcataaaccatatttggatccaactcat 39318313  T
Q  160 tattctctaaatcttttttaatagtttatctta 192  Q
    |   ||||||||| ||| |||| |||| |||||    
T  39318312 tgacctctaaatcctttctaatggtttctctta 39318280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 185
Target Start/End: Original strand, 43375658 - 43375722
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtt 185  Q
    |||||||||||||||  |||||| || | |||||||||||| ||||||||||||| |||||||||    
T  43375658 ataatgttctatcatgaaccatatttcggtccaactcattaatctctaaatctttcttaatagtt 43375722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 192
Target Start/End: Original strand, 3818916 - 3818987
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    ||||||||| |||||| |||||| ||  || |||||||||| ||||||||||||| |||||||||| |||||    
T  3818916 ataatgttccatcataaaccatatttctattcaactcattaatctctaaatctttcttaatagtttctctta 3818987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 192
Target Start/End: Original strand, 7762497 - 7762568
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    |||||||||||| ||| |||||| || ||||||||||||||   |||||||||||| ||||||||| |||||    
T  7762497 ataatgttctattataaaccatatttagatccaactcattaacatctaaatcttttctaatagtttctctta 7762568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 192
Target Start/End: Complemental strand, 9509548 - 9509469
Alignment:
Q  113 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    ||||||| ||||||||| |||||| |||||| |||| || |||||||||  || |||||||||  |||||||||||||||    
T  9509548 attacgccataatgttcaatcataaaccatatttggctctaactcattaggctgtaaatctttcctaatagtttatctta 9509469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 188
Target Start/End: Original strand, 29577203 - 29577269
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttat 188  Q
    |||||||||||||||| |||||| || |||||| ||||||| |||||| |||||| ||||||||||||    
T  29577203 ataatgttctatcata-accatattttgatccagctcattaatctctagatctttcttaatagtttat 29577269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 150 - 192
Target Start/End: Original strand, 8676954 - 8676996
Alignment:
Q  150 tccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    |||||||||||| |||||||||||||||||||||||| |||||    
T  8676954 tccaactcattaatctctaaatcttttttaatagtttctctta 8676996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 172
Target Start/End: Original strand, 37462878 - 37462986
Alignment:
Q  68 aacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcattat 162  Q
    |||||||| ||||||||||| |||||||||||| || | ||||||     ||||||| |||||||||||| ||| |||||| || |||| |||||||||     
T  37462878 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatgataaaccata-tttgatcaaactcattaa 37462976  T
Q  163 tctctaaatc 172  Q
     |||||||||    
T  37462977 cctctaaatc 37462986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 160
Target Start/End: Complemental strand, 51602344 - 51602239
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaa 154  Q
    |||| ||||||||||| ||||||||||| ||||||||||||  | | ||||||     || |||| || ||||||||||||| |||| | ||||||||||    
T  51602344 acaacaacaacaacaaccaagccttatcccactaagtggggttggctacatggatcaaatgacgccatgatgttctatcatacaccaaatttggatccaa 51602245  T
Q  155 ctcatt 160  Q
    ||||||    
T  51602244 ctcatt 51602239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 182
Target Start/End: Original strand, 52878351 - 52878420
Alignment:
Q  113 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaata 182  Q
    ||||| |||||| ||||||||||| | | ||||||||| ||||||||||  ||||||||||||| |||||    
T  52878351 attacactataaagttctatcataaatcgtagttggattcaactcattaacctctaaatcttttataata 52878420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 186
Target Start/End: Original strand, 4001520 - 4001580
Alignment:
Q  126 gttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 186  Q
    ||||||||| | |||||| ||||||||||||||||   |||||||||||||||||| ||||    
T  4001520 gttctatcaaaaaccatatttggatccaactcattgacctctaaatcttttttaatggttt 4001580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 184
Target Start/End: Complemental strand, 6025824 - 6025764
Alignment:
Q  124 atgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagt 184  Q
    ||||||||||| |||||||| ||  ||||||||||||| |||||| |||||||||| ||||    
T  6025824 atgttctatcagataccatatttctatccaactcattaatctctagatcttttttactagt 6025764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 42501335 - 42501259
Alignment:
Q  116 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    ||||| |||||||||||||||| ||||| ||  ||||||||||||| ||| || |||||| |||||| ||| |||||    
T  42501335 acgctgtaatgttctatcatattccatatttctatccaactcattaatctatagatctttcttaataatttctctta 42501259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 113 - 168
Target Start/End: Complemental strand, 6084205 - 6084150
Alignment:
Q  113 attacgctataatgttctatcatataccatagttggatccaactcattattctcta 168  Q
    ||||||| ||| |||||||||||| |||||| || |||||||||||||| ||||||    
T  6084205 attacgccatattgttctatcataaaccatattttgatccaactcattaatctcta 6084150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 168
Target Start/End: Original strand, 13827640 - 13827687
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctcta 168  Q
    ||||||||||||||||||||||| ||  ||||||||||||| ||||||    
T  13827640 ataatgttctatcatataccatatttctatccaactcattaatctcta 13827687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 60 - 99
Target Start/End: Original strand, 37430414 - 37430453
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggg 99  Q
    |||| ||||||||||| |||||||||||||||||||||||    
T  37430414 acaacaacaacaacaaccaagccttatctcactaagtggg 37430453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 2914111 - 2914157
Alignment:
Q  54 tgtgagacaaaaacaacaacaagcaagccttatctcactaagtgggg 100  Q
    ||||| |||| ||||||||||| ||||||||||| ||||||||||||    
T  2914111 tgtgatacaacaacaacaacaaccaagccttatcccactaagtgggg 2914157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 192
Target Start/End: Original strand, 8203223 - 8203265
Alignment:
Q  150 tccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    |||||||||||| |||||| ||||||||||||||||| |||||    
T  8203223 tccaactcattaatctctagatcttttttaatagtttctctta 8203265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 186
Target Start/End: Complemental strand, 8672145 - 8672075
Alignment:
Q  116 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 186  Q
    |||||||| |||||||||||| |||| | ||||||||||||||||   ||||||||| ||| |||| ||||    
T  8672145 acgctatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatggttt 8672075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 191
Target Start/End: Original strand, 9599446 - 9599524
Alignment:
Q  113 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctt 191  Q
    ||||||| |||| ||||||||||| ||||||  |||||| |||||||||  |||||||| |||  ||||||||| ||||    
T  9599446 attacgccataacgttctatcataaaccatatctggatcaaactcattaaactctaaatatttcctaatagtttctctt 9599524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 186
Target Start/End: Original strand, 10569130 - 10569196
Alignment:
Q  120 tataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 186  Q
    |||||||||||||||||||| ||| ||  ||||| || |||| |||||| |||||| ||||||||||    
T  10569130 tataatgttctatcatatacgatatttctatccagcttattaatctctagatctttcttaatagttt 10569196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 186
Target Start/End: Complemental strand, 19936743 - 19936617
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcat 159  Q
    ||||||||||| |||| |||||| ||||||| || | || | ||||||||     |||||  ||||||||||||||  |||||| ||||||| |||||||    
T  19936743 aacaacaacaatcaagtcttatcccactaagcggagtcggctacatggatcaaattacgccgtaatgttctatcattaaccatatttggatctaactcat 19936644  T
Q  160 tattctctaaatcttttttaatagttt 186  Q
    ||   |||||||||||  |||||||||    
T  19936643 taacatctaaatctttcctaatagttt 19936617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 21769711 - 21769793
Alignment:
Q  66 acaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccata 143  Q
    |||||||||| ||||||||||| |||||||||||| || | ||||||     ||||||| |||||||||||||| | ||||||    
T  21769711 acaacaacaaccaagccttatcacactaagtggggtcggctacatggatcaaattacgccataatgttctatcacaaaccata 21769793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 167
Target Start/End: Original strand, 25715326 - 25715432
Alignment:
Q  66 acaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 160  Q
    |||||||||| ||||||||||| ||||||||| || || | ||||||     ||||||| ||||| |||||||||| |||||| || | | |||||||||    
T  25715326 acaacaacaaccaagccttatcccactaagtgaggtcggctacatggatcaaattacgccataatattctatcataaaccatatttcggttcaactcatt 25715425  T
Q  161 attctct 167  Q
    | |||||    
T  25715426 aatctct 25715432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 199
Target Start/End: Original strand, 32082821 - 32082894
Alignment:
Q  125 tgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatcttaggtcttc 199  Q
    |||||||||| | |||||| ||| ||||||||||||   ||||||||||||| |||| |||| ||||||||||||    
T  32082821 tgttctatcaaaaaccatatttgaatccaactcattgacctctaaatcttttctaatggttt-tcttaggtcttc 32082894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 186
Target Start/End: Complemental strand, 39140794 - 39140672
Alignment:
Q  69 acaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattatt 163  Q
    ||||||| ||||| ||||| |||||||||||| || | ||||| ||     ||||| |||||||||||||  | |||||| |||||||||||| ||||      
T  39140794 acaacaaccaagcattatcccactaagtggggtcggctacatgaatcaaattacgccataatgttctatctgaaaccatatttggatccaactaattaac 39140695  T
Q  164 ctctaaatcttttttaatagttt 186  Q
    |||||||| |||  |||||||||    
T  39140694 ctctaaatttttcctaatagttt 39140672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 114
Target Start/End: Original strand, 43481792 - 43481846
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatggat 114  Q
    |||| ||||||||||| ||||||||||| |||||||||||| || | ||||||||    
T  43481792 acaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggat 43481846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 150
Target Start/End: Original strand, 44941775 - 44941865
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggat 150  Q
    ||||||||||| ||||||||||| |||||||||||| || | ||||||     ||||||| ||| |||||||||||| |||| | ||||||    
T  44941775 aacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccatagtgttctatcataaaccaaatttggat 44941865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 990518 - 990583
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 186  Q
    |||||||||||||||| ||||||  | |||||||||||||| |||||| |||| | | ||||||||    
T  990518 ataatgttctatcataaaccatatgttgatccaactcattaatctctagatctatctcaatagttt 990583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 29577535 - 29577486
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggat 114  Q
    ||||||||||| ||||||||||| |||||||||||| || | ||||||||    
T  29577535 aacaacaacaaccaagccttatcccactaagtggggtcggctacatggat 29577486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 121 - 174
Target Start/End: Original strand, 40920589 - 40920642
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatctt 174  Q
    ||||| ||||||||||||||||| ||  ||||||||||||| |||||| |||||    
T  40920589 ataatattctatcatataccatatttctatccaactcattaatctctagatctt 40920642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 186
Target Start/End: Original strand, 4590533 - 4590657
Alignment:
Q  67 caacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatta 161  Q
    ||||||||| ||| ||||||| |||||||||||| || | ||||||||     ||| | ||| |||||||||| ||| ||||  |  ||||||||||| |    
T  4590533 caacaacaaccaaaccttatcccactaagtggggtcggctacatggatcaaattacaccatattgttctatcacatatcatatatctatccaactcatca 4590632  T
Q  162 ttctctaaatcttttttaatagttt 186  Q
     ||| ||||||||| ||||||||||    
T  4590633 atctataaatctttcttaatagttt 4590657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 8809495 - 8809535
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtgggg 100  Q
    |||| ||||||||||| ||||||||||| ||||||||||||    
T  8809495 acaacaacaacaacaaccaagccttatcccactaagtgggg 8809535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 30985302 - 30985342
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtgggg 100  Q
    |||| ||||||||||| ||||||||||| ||||||||||||    
T  30985302 acaacaacaacaacaaacaagccttatcccactaagtgggg 30985342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 113
Target Start/End: Original strand, 38758019 - 38758067
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatgga 113  Q
    ||||||||||| ||||||||||| |||||||||||| || | |||||||    
T  38758019 aacaacaacaaccaagccttatcccactaagtggggtcggctacatgga 38758067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 38869109 - 38869033
Alignment:
Q  116 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    |||| |||||||||||||||||||||||  |  ||||||| ||||| || ||| |||||| |||||| ||| |||||    
T  38869109 acgccataatgttctatcatataccatatatctatccaacccattaatcgctagatctttcttaataatttctctta 38869033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 98
Target Start/End: Original strand, 50771555 - 50771587
Alignment:
Q  66 acaacaacaagcaagccttatctcactaagtgg 98  Q
    |||||||||| ||||||||||||||||||||||    
T  50771555 acaacaacaaccaagccttatctcactaagtgg 50771587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 1e-18; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 60 - 182
Target Start/End: Complemental strand, 55008034 - 55007907
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaa 154  Q
    |||| ||||||||||| ||||||||||| |||||||||||| || | ||||||||     ||||  |||||| ||||||||| |||||| || | |||||    
T  55008034 acaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgtcataatgatctatcataaaccatatttcggtccaa 55007935  T
Q  155 ctcattattctctaaatcttttttaata 182  Q
    ||||||| ||||||||||||| ||||||    
T  55007934 ctcattaatctctaaatctttcttaata 55007907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 67 - 192
Target Start/End: Original strand, 26037506 - 26037636
Alignment:
Q  67 caacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatta 161  Q
    ||||||||| ||| ||||||| |||||||||||| || | ||||||||     ||||| ||| |||||||||||| |||||| ||||||||||||||||     
T  26037506 caacaacaaccaaaccttatcccactaagtggggtcggctacatggatccaattacgccatagtgttctatcataaaccatatttggatccaactcattc 26037605  T
Q  162 ttctctaaatcttttttaatagtttatctta 192  Q
      ||||||||||||  ||||||||| |||||    
T  26037606 acctctaaatctttcctaatagtttctctta 26037636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 170
Target Start/End: Original strand, 34208268 - 34208378
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcat 159  Q
    ||||||||||| ||||||||||| || |||| |||| |||  |||||||| |     ||| |||||||||||||||| |||||| |||||||||||||||    
T  34208268 aacaacaacaaccaagccttatcccaataaggggggtcgagtacatggatcaaattgcgccataatgttctatcataaaccatatttggatccaactcat 34208367  T
Q  160 tattctctaaa 170  Q
    || ||||||||    
T  34208368 taatctctaaa 34208378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 65 - 185
Target Start/End: Complemental strand, 25575107 - 25574982
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcat 159  Q
    ||||||||||| ||||||||||| |||||| ||||| |  | ||||||||     ||| | | |||||||||||||| |||||| || ||||||||||||    
T  25575107 aacaacaacaaccaagccttatcccactaaatggggtctgctacatggatcaaattacaccacaatgttctatcataaaccatatttcgatccaactcat 25575008  T
Q  160 tattctctaaatcttttttaatagtt 185  Q
    || |||||| |||||| |||||||||    
T  25575007 taatctctagatctttcttaatagtt 25574982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 66 - 186
Target Start/End: Original strand, 31959814 - 31959939
Alignment:
Q  66 acaacaacaagcaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcatt 160  Q
    |||||||||| ||||||||||| |||||||||||| || | |||||||| |     ||| ||| |||||||||||| |||| | ||||||||||||||||    
T  31959814 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcatt 31959913  T
Q  161 attctctaaatcttttttaatagttt 186  Q
       ||||||||| ||| |||||||||    
T  31959914 gacctctaaatcctttctaatagttt 31959939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 60 - 192
Target Start/End: Complemental strand, 37488379 - 37488242
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaa 154  Q
    |||| ||||||||||| ||||||||||| ||||||||||||| | | ||||||     ||||||| |||||| ||||||||  |||||| || |||| ||    
T  37488379 acaacaacaacaacaaccaagccttatcccactaagtggggctggctacatggatcaaattacgccataatgctctatcattaaccatattttgatcaaa 37488280  T
Q  155 ctcattattctctaaatcttttttaatagtttatctta 192  Q
    || |||| | |||| |||||| |||||||||| |||||    
T  37488279 cttattaatttctagatctttcttaatagtttctctta 37488242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 67 - 186
Target Start/End: Original strand, 26024851 - 26024975
Alignment:
Q  67 caacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatta 161  Q
    ||||||||| ||||||||||| ||||||||| || || | ||||||||     ||| | |||||||||||||||| |||||   | ||||||||||||||    
T  26024851 caacaacaaccaagccttatcccactaagtgaggtcggctacatggataaaattacaccataatgttctatcataaaccatgtctcgatccaactcatta 26024950  T
Q  162 ttctctaaatcttttttaatagttt 186  Q
     |||||| |||||| ||||||||||    
T  26024951 atctctagatctttcttaatagttt 26024975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 185
Target Start/End: Original strand, 27049229 - 27049301
Alignment:
Q  113 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtt 185  Q
    ||||||| ||||||||| |||||| |||||| ||||| ||||||||||| ||| ||||||||| |||||||||    
T  27049229 attacgccataatgttcgatcataaaccatatttggaaccaactcattaatctataaatctttcttaatagtt 27049301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 160
Target Start/End: Original strand, 39100535 - 39100635
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcat 159  Q
    ||||||||||| ||||||||||| |||||||||||| || | ||||||     ||||||| |||||||||||| ||| || ||| |||||||||||||||    
T  39100535 aacaacaacaaccaagccttatcccactaagtggggtcggctacatggattatattacgccataatgttctatgataaacaatatttggatccaactcat 39100634  T
Q  160 t 160  Q
    |    
T  39100635 t 39100635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 181
Target Start/End: Original strand, 48622543 - 48622663
Alignment:
Q  66 acaacaacaagcaagccttatctcactaagtggggccgacgacatggatt-----acgctataatgttctatcatataccatagttggatccaactcatt 160  Q
    |||||||||| ||||||||||| |||||||||||| || | |||||||||     |||| ||| |||||||||||| |||| | ||||||| ||||||||    
T  48622543 acaacaacaaccaagccttatcccactaagtggggtcggctacatggattaaatgacgccatagtgttctatcatacaccaaatttggatcaaactcatt 48622642  T
Q  161 attctctaaatcttttttaat 181  Q
       ||||||||||||| ||||    
T  48622643 gacctctaaatcttttctaat 48622663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 183
Target Start/End: Original strand, 55388213 - 55388333
Alignment:
Q  68 aacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcattat 162  Q
    |||||||| ||||||||||| |||||||||||| |||| ||||||     ||||| | | |||||||||||||| | |||| || |||| |||||||||     
T  55388213 aacaacaaccaagccttatcccactaagtggggtcgacaacatggatcaaattacaccacaatgttctatcataaatcatatttcgatctaactcattaa 55388312  T
Q  163 tctctaaatcttttttaatag 183  Q
    |||| |||||||| |||||||    
T  55388313 tctccaaatctttcttaatag 55388333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 1777011 - 1777142
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaa 154  Q
    |||| ||||||||||| ||||||||||| || ||||||||| || | |||||||| |     ||| ||| |||||||||||| |||| | ||||||||||    
T  1777011 acaagaacaacaacaaccaagccttatcccattaagtggggtcggctacatggatcaaatgacgccatactgttctatcatacaccaaatttggatccaa 1777110  T
Q  155 ctcattattctctaaatcttttttaatagttt 186  Q
    ||||||   ||||||||||||| |||| ||||    
T  1777111 ctcattgacctctaaatcttttctaatggttt 1777142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 69 - 199
Target Start/End: Complemental strand, 31459273 - 31459139
Alignment:
Q  69 acaacaagcaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattatt 163  Q
    ||||||| ||||||||||| |||||||||||| ||   |||||||| |     ||| ||||||||| |||| | |||||| | ||||||||||||||| |    
T  31459273 acaacaaccaagccttatcccactaagtggggtcgggtacatggatcaagttccgccataatgttcaatcacacaccatattgggatccaactcattaat 31459174  T
Q  164 ctctaaatcttttttaatagtttatcttaggtcttc 199  Q
    ||||||||||||  ||||||||| || |||||||||    
T  31459173 ctctaaatctttcctaatagtttttc-taggtcttc 31459139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 125 - 191
Target Start/End: Complemental strand, 31043290 - 31043224
Alignment:
Q  125 tgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctt 191  Q
    |||||||||| | |||||| ||||||||||||||||| |||||||||||||  ||||||||| ||||    
T  31043290 tgttctatcacaaaccatatttggatccaactcattaatctctaaatctttcctaatagtttctctt 31043224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 66 - 191
Target Start/End: Original strand, 42639020 - 42639150
Alignment:
Q  66 acaacaacaagcaagccttatctcactaagtggggccgacgacatggattac-----gctataatgttctatcatataccatagttggatccaactcatt 160  Q
    ||||||||||||| |||||||| ||||||| ||||  | | ||||| |||||     || |||||||||||||| |||||||| ||  ||||||||||||    
T  42639020 acaacaacaagcatgccttatcccactaagcggggttggctacatgaattacacgacgccataatgttctatcaaataccatatttctatccaactcatt 42639119  T
Q  161 attctctaaatcttttttaatagtttatctt 191  Q
    | || ||| |||||| |||||||||| ||||    
T  42639120 aatcgctagatctttcttaatagtttctctt 42639150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 192
Target Start/End: Original strand, 45204900 - 45204970
Alignment:
Q  122 taatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    ||||||||||||||| |||||| |||||||||||| ||||  ||||||||||||  ||||||||| |||||    
T  45204900 taatgttctatcataaaccatatttggatccaacttattaaactctaaatctttcctaatagtttctctta 45204970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 186
Target Start/End: Original strand, 52569514 - 52569640
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcat 159  Q
    ||||||||||| ||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||| | |||||||||||||||    
T  52569514 aacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcat 52569613  T
Q  160 tattctctaaatcttttttaatagttt 186  Q
    |   ||||||||| ||| |||| ||||    
T  52569614 tgacctctaaatcctttctaatggttt 52569640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 30621261 - 30621326
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 186  Q
    |||||||||||||||| |||||| || | |||||| ||||| ||||||||||||| ||||||||||    
T  30621261 ataatgttctatcataaaccatatttcggtccaacacattaatctctaaatctttcttaatagttt 30621326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 192
Target Start/End: Complemental strand, 35690559 - 35690422
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaa 154  Q
    |||| |||||||| || |||| |||||| |||||||||||| || | ||||||||     ||||| |||||||||||||||| ||| |  ||||||| ||    
T  35690559 acaacaacaacaaaaaccaagtcttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatcataaaccctgattggatcaaa 35690460  T
Q  155 ctcattattctctaaatcttttttaatagtttatctta 192  Q
    |||||||  |||||||| |||  ||||||||| |||||    
T  35690459 ctcattaacctctaaatttttcgtaatagtttctctta 35690422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 186
Target Start/End: Original strand, 56439623 - 56439696
Alignment:
Q  113 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 186  Q
    |||||||||||||||||||||||| |||||| || ||||||||| |||| | || ||||||||  |||||||||    
T  56439623 attacgctataatgttctatcataaaccatatttcgatccaactaattaatttccaaatctttcataatagttt 56439696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 77 - 192
Target Start/End: Complemental strand, 39708704 - 39708584
Alignment:
Q  77 caagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattattctctaaat 171  Q
    |||| |||||| |||||||||||| |||| ||||||||     ||||  ||| |||||||||||| |||||| ||||||||||||||||   ||||||||    
T  39708704 caagtcttatcccactaagtggggtcgactacatggatcaaattacgacatagtgttctatcataaaccatatttggatccaactcattgacctctaaat 39708605  T
Q  172 cttttttaatagtttatctta 192  Q
    | ||| |||| |||| |||||    
T  39708604 cctttctaatggtttctctta 39708584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 186
Target Start/End: Complemental strand, 8286727 - 8286596
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaa 154  Q
    |||| ||||||||||| ||||||||||| |||||||||||| || | ||||||     || |||  ||| |||||||||||| |||| | ||||||||||    
T  8286727 acaacaacaacaacaaccaagccttatcccactaagtgggggcggctacatggatcaaatgacgtcatagtgttctatcataaaccaaatttggatccaa 8286628  T
Q  155 ctcattattctctaaatcttttttaatagttt 186  Q
    ||||||   ||||||||| ||| |||| ||||    
T  8286627 ctcattgacctctaaatcctttctaatggttt 8286596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 186
Target Start/End: Complemental strand, 21528576 - 21528445
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaa 154  Q
    |||| ||||||||||| ||||||||||| |||||||||||| || | |||||||| |     | | ||| |||||||||| | |||||| ||| ||||||    
T  21528576 acaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgccaccatagtgttctatcaaaaaccatatttgaatccaa 21528477  T
Q  155 ctcattattctctaaatcttttttaatagttt 186  Q
    ||||||   ||||||||||||| |||| ||||    
T  21528476 ctcattgacctctaaatcttttctaatggttt 21528445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 192
Target Start/End: Complemental strand, 49987638 - 49987559
Alignment:
Q  113 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    ||||||| |||||| ||||||||  |||||||||||||||| ||||||  |||| || ||||| |||||||||| |||||    
T  49987638 attacgccataatgctctatcatgaaccatagttggatccatctcatttatctccaagtctttcttaatagtttctctta 49987559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 192
Target Start/End: Complemental strand, 51421952 - 51421881
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    |||||||||||||||| |||||  |||||||||| ||||||  ||||||||||||  ||||||||| |||||    
T  51421952 ataatgttctatcataaaccatttttggatccaattcattaacctctaaatctttcctaatagtttctctta 51421881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 113 - 175
Target Start/End: Original strand, 53518375 - 53518437
Alignment:
Q  113 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttt 175  Q
    ||||||| ||| |||||||||||| |||||| || ||||||||||||||  ||||||||||||    
T  53518375 attacgccatagtgttctatcataaaccatatttagatccaactcattaacctctaaatcttt 53518437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 186
Target Start/End: Original strand, 55768555 - 55768624
Alignment:
Q  117 cgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 186  Q
    |||||||||||||||||||| |||||| || |||||||||||||  ||| ||| ||||| |||| |||||    
T  55768555 cgctataatgttctatcatacaccatactttgatccaactcattgatctttaattctttcttaacagttt 55768624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 186
Target Start/End: Original strand, 55832811 - 55832880
Alignment:
Q  117 cgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 186  Q
    |||||||||||||||||||| |||||| || |||||||||||||  ||| ||| ||||| |||| |||||    
T  55832811 cgctataatgttctatcatacaccatactttgatccaactcattgatctttaattctttcttaacagttt 55832880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 175
Target Start/End: Original strand, 22420715 - 22420831
Alignment:
Q  64 aaacaacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactca 158  Q
    |||||||||||| ||||||||||| |||||||||||| | || |||| |||      |||| |||||| |||||||| |||||||  |  ||||||||||    
T  22420715 aaacaacaacaaccaagccttatcccactaagtggggtcaactacatagatcaaacaacgccataatgctctatcatttaccatatctctatccaactca 22420814  T
Q  159 ttattctctaaatcttt 175  Q
    ||| |||||| ||||||    
T  22420815 ttaatctctagatcttt 22420831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 173
Target Start/End: Complemental strand, 26510610 - 26510558
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatct 173  Q
    |||||||||||||  | |||||| ||||||||||||||||| |||||||||||    
T  26510610 ataatgttctatcgcaaaccatatttggatccaactcattaatctctaaatct 26510558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 168
Target Start/End: Complemental strand, 31339803 - 31339699
Alignment:
Q  69 acaacaagcaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattatt 163  Q
    ||||||||||||||||||| |||||||||||| ||   |||||||  |     ||  ||||||||||||||| ||||||| || |||||||||||||| |    
T  31339803 acaacaagcaagccttatcccactaagtggggtcggatacatggaccaaacgacgtcataatgttctatcatgtaccatatttcgatccaactcattaat 31339704  T
Q  164 ctcta 168  Q
    |||||    
T  31339703 ctcta 31339699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 37042667 - 37042795
Alignment:
Q  69 acaacaagcaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattatt 163  Q
    ||||||| ||||||||||| |||||||| ||| || | |||||||| |     | | |||||||||||||| ||||| || ||  |||||||||| || |    
T  37042667 acaacaaccaagccttatcccactaagtcgggtcggctacatggatcaaacgacaccataatgttctatcaaataccgtatttctatccaactcaataat 37042766  T
Q  164 ctctaaatcttttttaatagtttatctta 192  Q
    ||||| |||||| |||||||||| |||||    
T  37042767 ctctagatctttcttaatagtttctctta 37042795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 113 - 168
Target Start/End: Complemental strand, 5306526 - 5306471
Alignment:
Q  113 attacgctataatgttctatcatataccatagttggatccaactcattattctcta 168  Q
    ||||||| |||||||| | ||||| |||||| ||||||||||||||||| ||||||    
T  5306526 attacgccataatgttatgtcataaaccatatttggatccaactcattaatctcta 5306471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 192
Target Start/End: Complemental strand, 21107214 - 21107143
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    |||| ||||||||||| |||||| |||||||||||| |||| || ||||| ||||  ||||||||| |||||    
T  21107214 ataaagttctatcataaaccatatttggatccaactaattaatcactaaaactttcctaatagtttctctta 21107143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 60 - 186
Target Start/End: Complemental strand, 21237146 - 21237015
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaa 154  Q
    |||| ||||||||||| ||| ||||||| ||||||||||||  | | ||||| || |     ||| ||| ||||||||||||||||| | ||||||||||    
T  21237146 acaacaacaacaacaaccaatccttatcccactaagtggggttggctacatgtatcaaatgacgccatagtgttctatcatataccaaatttggatccaa 21237047  T
Q  155 ctcattattctctaaatcttttttaatagttt 186  Q
    ||||||   ||||||||| ||| |||| ||||    
T  21237046 ctcattgacctctaaatcctttctaatggttt 21237015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 122 - 192
Target Start/End: Original strand, 40420275 - 40420343
Alignment:
Q  122 taatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    ||||||||||||||| |||||| | |||| |||||||||| |||||  || |||||||||||||| |||||    
T  40420275 taatgttctatcataaaccatattaggattcaactcattaatctct--attttttttaatagtttctctta 40420343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 192
Target Start/End: Complemental strand, 47372873 - 47372802
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    |||||||||||| |||||||||| ||  ||||||||||||| |||||  |||||| ||| |||||| |||||    
T  47372873 ataatgttctataatataccatatttctatccaactcattaatctctggatctttattagtagtttctctta 47372802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 60 - 99
Target Start/End: Original strand, 48451067 - 48451106
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggg 99  Q
    |||| ||||||||||| |||||||||||||||||||||||    
T  48451067 acaacaacaacaacaaccaagccttatctcactaagtggg 48451106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 192
Target Start/End: Complemental strand, 53540512 - 53540441
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    |||||||||||||||| |||||| ||   |||||||||||| |||| || |||||  |||||||||||||||    
T  53540512 ataatgttctatcataaaccatatttttgtccaactcattaatctccaagtctttcctaatagtttatctta 53540441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 114
Target Start/End: Original strand, 30634100 - 30634154
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatggat 114  Q
    |||| ||||||||||| ||||||||||| |||||||||||| || | ||||||||    
T  30634100 acaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggat 30634154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 41192283 - 41192229
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttt 175  Q
    ||||||||||| ||||||||||| ||  ||||||||||||| |||||| ||||||    
T  41192283 ataatgttctaccatataccatatttctatccaactcattaatctctagatcttt 41192229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 47147593 - 47147530
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 186  Q
    |||||||||||||||||| ||||  |  ||||||||||||| |||||| |||||| ||||||||||    
T  47147593 ataatgttctatcatatatcatatct--atccaactcattaatctctagatctttcttaatagttt 47147530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 114
Target Start/End: Original strand, 50238609 - 50238663
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatggat 114  Q
    |||| ||||||||||| ||||||||||| |||||||||||| || | ||||||||    
T  50238609 acaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggat 50238663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 114
Target Start/End: Original strand, 50238695 - 50238749
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatggat 114  Q
    |||| ||||||||||| ||||||||||| |||||||||||| || | ||||||||    
T  50238695 acaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggat 50238749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 56130453 - 56130403
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggatt 115  Q
    ||||||||||| ||||||||||| |||||||||||| || | |||||||||    
T  56130453 aacaacaacaaccaagccttatcccactaagtggggtcggctacatggatt 56130403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 436512 - 436463
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggat 114  Q
    ||||||||||| ||||||||||| |||||||||||| || | ||||||||    
T  436512 aacaacaacaaccaagccttatcccactaagtggggtcggctacatggat 436463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 60 - 160
Target Start/End: Original strand, 19154857 - 19154962
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaa 154  Q
    |||| ||||||||||| ||||||||||| |||||||||||| |  |  |||||     || |||| ||| |||||||||||| |||| | ||||||||||    
T  19154857 acaacaacaacaacaaccaagccttatcccactaagtggggtcagctgcatggatcaaataacgccatagtgttctatcataaaccaaatttggatccaa 19154956  T
Q  155 ctcatt 160  Q
    ||||||    
T  19154957 ctcatt 19154962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 28550521 - 28550586
Alignment:
Q  127 ttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    |||||||| | |||||| ||||||| |||||||||  ||||||||||||  ||||||||| |||||    
T  28550521 ttctatcaaaaaccatatttggatcaaactcattaacctctaaatctttcctaatagtttctctta 28550586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 113 - 186
Target Start/End: Original strand, 34233076 - 34233149
Alignment:
Q  113 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 186  Q
    ||||||||| |||||||||||||| ||| || || |||| ||||||||| ||||||  ||||| | ||||||||    
T  34233076 attacgctacaatgttctatcataaaccttattttgatctaactcattaatctctaggtctttatgaatagttt 34233149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 115 - 160
Target Start/End: Original strand, 41729504 - 41729549
Alignment:
Q  115 tacgctataatgttctatcatataccatagttggatccaactcatt 160  Q
    ||||| ||| |||||||||||| |||||| ||||||||||||||||    
T  41729504 tacgccatagtgttctatcataaaccatatttggatccaactcatt 41729549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 43434207 - 43434158
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggat 114  Q
    ||||||||||| ||||||||||| |||||||||||  |||| ||||||||    
T  43434207 aacaacaacaaccaagccttatcccactaagtgggctcgactacatggat 43434158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 114
Target Start/End: Original strand, 45209204 - 45209253
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggat 114  Q
    ||||||||||| ||||||||||| |||||||||||| || | ||||||||    
T  45209204 aacaacaacaaccaagccttatcccactaagtggggtcggctacatggat 45209253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 46153991 - 46153942
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggat 114  Q
    ||||||||||| ||||||||||| |||||||||||| || | ||||||||    
T  46153991 aacaacaacaaccaagccttatcccactaagtggggtcggctacatggat 46153942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 192
Target Start/End: Original strand, 33225895 - 33225964
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    |||||||||||||||| | |||| || |||  ||||| ||| ||||||||||||| |||||||||| |||||    
T  33225895 ataatgttctatcataaaacatattttgat--aactcgttaatctctaaatctttcttaatagtttctctta 33225964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 44385052 - 44384988
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtt 185  Q
    |||||||||||||||| |||||| |   |||||||| |||| |||||| |||||| |||||||||    
T  44385052 ataatgttctatcataaaccatattaatatccaacttattaatctctagatctttcttaatagtt 44384988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 160
Target Start/End: Original strand, 47265194 - 47265294
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcat 159  Q
    |||||||| || ||||||||||| ||||||||| || || | ||||||     ||||| ||||| |||||||||||| | || | |||||||||||||||    
T  47265194 aacaacaataaccaagccttatcccactaagtgaggtcggctacatggatcaaattacactatagtgttctatcatagatcaaatttggatccaactcat 47265293  T
Q  160 t 160  Q
    |    
T  47265294 t 47265294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 49454473 - 49454513
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtgggg 100  Q
    |||| ||||||||||| ||||||||||| ||||||||||||    
T  49454473 acaacaacaacaacaaccaagccttatcccactaagtgggg 49454513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 5e-18; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 65 - 186
Target Start/End: Original strand, 13561385 - 13561511
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcat 159  Q
    ||||||||||| ||||||||||| |||||||||||| || | |||||||| |     ||| ||| |||||||||| | ||||||||||||||||||||||    
T  13561385 aacaacaacaaacaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatagttggatccaactcat 13561484  T
Q  160 tattctctaaatcttttttaatagttt 186  Q
    |   ||||||||||||| |||| ||||    
T  13561485 tgacctctaaatcttttctaatggttt 13561511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 418033 - 418148
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcat 159  Q
    ||||||||||  |||||| |||| ||| |||||||| || | ||||||||     ||||| |||||||||||||||| |||| | |||||||||||||||    
T  418033 aacaacaacattcaagccatatcccaccaagtggggtcggctacatggatcaaattacgccataatgttctatcataaaccacatttggatccaactcat 418132  T
Q  160 tattctctaaatcttt 175  Q
    || |||||||||||||    
T  418133 taatctctaaatcttt 418148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 65 - 192
Target Start/End: Complemental strand, 11675813 - 11675680
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagtt-ggatccaactca 158  Q
    ||||||||||| |||||||||||  ||||||||||| || | ||||||||     ||||| |||||||||||||||| |||||| ||   ||||||||||    
T  11675813 aacaacaacaaccaagccttatccaactaagtggggtcggctacatggattaaactacgccataatgttctatcataaaccatatttaaaatccaactca 11675714  T
Q  159 ttattctctaaatcttttttaatagtttatctta 192  Q
    ||| ||||||||||| |  ||||||||| |||||    
T  11675713 ttaatctctaaatctgtcctaatagtttctctta 11675680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 193
Target Start/End: Complemental strand, 9235269 - 9235197
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatcttag 193  Q
    |||||||||||||||| |||||| || |||||| ||||||| |||||| |||||| |||||||||| ||||||    
T  9235269 ataatgttctatcataaaccatatttcgatccagctcattaatctctatatctttcttaatagtttctcttag 9235197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 192
Target Start/End: Complemental strand, 14668054 - 14667922
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcat 159  Q
    |||||| |||| |||| |||||| |||||||||||| ||   ||||||||     ||| | |||||||||||||||| |||||| |||||||||||||||    
T  14668054 aacaactacaaccaagtcttatcccactaagtggggtcggttacatggatcaaattacaccataatgttctatcataaaccatacttggatccaactcat 14667955  T
Q  160 tattctctaaatcttttttaatagtttatctta 192  Q
    || |||||| |||||| ||| ||| || |||||    
T  14667954 taatctctagatctttcttagtagcttctctta 14667922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 191
Target Start/End: Original strand, 12576920 - 12576990
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctt 191  Q
    |||||| |||||||||||||||| ||  || |||||||||| |||||| |||||| |||||||||||||||    
T  12576920 ataatggtctatcatataccatatttctattcaactcattaatctctagatctttcttaatagtttatctt 12576990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 186
Target Start/End: Complemental strand, 29816665 - 29816539
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcat 159  Q
    ||||||||||| ||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||| | |||||||||||||||    
T  29816665 aacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcat 29816566  T
Q  160 tattctctaaatcttttttaatagttt 186  Q
    |   ||||||||| ||| |||| ||||    
T  29816565 tgacctctaaatcctttctaatggttt 29816539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 186
Target Start/End: Complemental strand, 3302126 - 3302001
Alignment:
Q  66 acaacaacaagcaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcatt 160  Q
    |||||||||| ||||||||||| |||||||||||| || | |||||||| |     |||  || |||||||||| | |||||| ||||||||||||||||    
T  3302126 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccgtagtgttctatcaaaaaccatatttggatccaactcatt 3302027  T
Q  161 attctctaaatcttttttaatagttt 186  Q
       ||||||||||||| |||| ||||    
T  3302026 gacctctaaatcttttataatggttt 3302001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 185
Target Start/End: Original strand, 17340496 - 17340560
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtt 185  Q
    |||||||| ||||||| |||||| ||||||| |||||||||  |||||||||||| |||||||||    
T  17340496 ataatgttatatcataaaccatatttggatcaaactcattaacctctaaatctttcttaatagtt 17340560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 65 - 152
Target Start/End: Complemental strand, 18855890 - 18855798
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatcc 152  Q
    ||||||||||| |||| |||||| |||||||||||| || | ||||||||     || ||||||||||||||||||| |||||| ||||||||    
T  18855890 aacaacaacaaccaagtcttatcccactaagtggggtcggctacatggatcaaattatgctataatgttctatcataaaccatatttggatcc 18855798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 186
Target Start/End: Complemental strand, 4496672 - 4496541
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaa 154  Q
    |||| ||||||||||| ||||||||||| |||||||||||| || | ||||||     || | || ||| |||||||||||| |||| | ||||||||||    
T  4496672 acaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgatgccatagtgttctatcatacaccaaatttggatccaa 4496573  T
Q  155 ctcattattctctaaatcttttttaatagttt 186  Q
    ||||||   ||||||||| ||| |||| ||||    
T  4496572 ctcattgacctctaaatcctttctaatggttt 4496541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 192
Target Start/End: Complemental strand, 6889223 - 6889144
Alignment:
Q  113 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    ||||||| |||||||||||||||| |||||| || |  |||||| |||| |||||||||||||  ||||||||| |||||    
T  6889223 attacgccataatgttctatcataaaccatattttggcccaactaattaatctctaaatctttcctaatagtttctctta 6889144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 12492378 - 12492509
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatg-----gattacgctataatgttctatcatataccatagttggatccaa 154  Q
    |||| ||||||||||| ||||||||||| |||||||||||| || | |||||      || |||| ||| |||||||||||| |||| | ||||||||||    
T  12492378 acaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatgcatcaaatgacgccatagtgttctatcatacaccaaatttggatccaa 12492477  T
Q  155 ctcattattctctaaatcttttttaatagttt 186  Q
    ||||||   ||||||||| ||| |||| ||||    
T  12492478 ctcattgacctctaaatcctttctaatggttt 12492509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 192
Target Start/End: Complemental strand, 14725736 - 14725669
Alignment:
Q  125 tgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    ||||| |||||| |||||| || ||||||||||||||  || |||||||||| |||||||||||||||    
T  14725736 tgttcgatcataaaccatattttgatccaactcattaacctttaaatcttttataatagtttatctta 14725669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 28976853 - 28976984
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatg-----gattacgctataatgttctatcatataccatagttggatccaa 154  Q
    |||| ||||||||||| ||||||||||| |||||||||||| || | |||||      || |||| ||| |||||||||||| |||| | ||||||||||    
T  28976853 acaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatgaatcaaatgacgccatagtgttctatcatacaccaaatttggatccaa 28976952  T
Q  155 ctcattattctctaaatcttttttaatagttt 186  Q
    ||||||   ||||||||| ||| |||| ||||    
T  28976953 ctcattgacctctaaatcctttataatggttt 28976984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 114
Target Start/End: Complemental strand, 36551431 - 36551380
Alignment:
Q  63 aaaacaacaacaagcaagccttatctcactaagtggggccgacgacatggat 114  Q
    ||||||||||||| |||||||||||||||||||||||| || | ||||||||    
T  36551431 aaaacaacaacaaccaagccttatctcactaagtggggtcggctacatggat 36551380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 64 - 192
Target Start/End: Complemental strand, 5303731 - 5303595
Alignment:
Q  64 aaacaacaacaagcaagccttatctcactaagtggggccgacgacatggatta------cgctataatgttctatcatataccatag--ttggatccaac 155  Q
    |||||||||||| || | |||||| |||||||||||  || | ||||||||||      ||| ||||| |||||||||||||||||   ||  |||||||    
T  5303731 aaacaacaacaaccaggacttatcccactaagtgggatcggctacatggattaaaacaacgccataatattctatcatataccatatatttctatccaac 5303632  T
Q  156 tcattattctctaaatcttttttaatagtttatctta 192  Q
    ||||||  |||||||||||||| |||||||| |||||    
T  5303631 tcattaaactctaaatctttttcaatagtttctctta 5303595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 136
Target Start/End: Complemental strand, 38132621 - 38132543
Alignment:
Q  63 aaaacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcata 136  Q
    ||||||||||||| ||||||||||| |||||||||||| || | ||||||     ||||||| ||||||||||||||||    
T  38132621 aaaacaacaacaaccaagccttatcccactaagtggggtcggccacatggatcaaattacgccataatgttctatcata 38132543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 77 - 186
Target Start/End: Complemental strand, 38685238 - 38685124
Alignment:
Q  77 caagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattattctctaaat 171  Q
    ||||||||||| |||||||||||| || | |||||||| |     ||| ||| |||||||||||| |||||| ||||||||||||||||   ||||||||    
T  38685238 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatattgttctatcataaaccatatttggatccaactcattgacctctaaat 38685139  T
Q  172 cttttttaatagttt 186  Q
    | ||| |||| ||||    
T  38685138 cctttctaatggttt 38685124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 160
Target Start/End: Complemental strand, 5558425 - 5558324
Alignment:
Q  64 aaacaacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactca 158  Q
    ||||||| |||| ||||||||||| |||||||||||| || | ||||||||     || || ||| |||||||||||| |||||| |||||||| |||||    
T  5558425 aaacaacgacaaccaagccttatcccactaagtggggtcggctacatggatcaaattatgccatagtgttctatcataaaccatatttggatcctactca 5558326  T
Q  159 tt 160  Q
    ||    
T  5558325 tt 5558324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 125 - 192
Target Start/End: Complemental strand, 23980162 - 23980095
Alignment:
Q  125 tgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    |||||||||||| |||||| || |||||||||||||| ||| |||||| || | |||||||| |||||    
T  23980162 tgttctatcataaaccatatttagatccaactcattaatctataaatcattctcaatagtttctctta 23980095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 149 - 192
Target Start/End: Original strand, 28186863 - 28186906
Alignment:
Q  149 atccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    ||||||||||||| ||||||||||||| |||||||||| |||||    
T  28186863 atccaactcattaatctctaaatctttcttaatagtttctctta 28186906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 132 - 175
Target Start/End: Complemental strand, 41894277 - 41894234
Alignment:
Q  132 tcatataccatagttggatccaactcattattctctaaatcttt 175  Q
    ||||| |||||| ||||||||||||||||| |||||||||||||    
T  41894277 tcataaaccatatttggatccaactcattaatctctaaatcttt 41894234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 160
Target Start/End: Complemental strand, 14666000 - 14665897
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaa 154  Q
    |||| ||||||||||| ||||||||||| |||||||||||| || | |||| |     ||||||| | |  ||||||||||| |||||| ||||||||||    
T  14666000 acaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatagatcaaattacgccaga--gttctatcataaaccatatttggatccaa 14665903  T
Q  155 ctcatt 160  Q
    ||||||    
T  14665902 ctcatt 14665897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 175
Target Start/End: Original strand, 43557893 - 43557947
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttt 175  Q
    |||||||||||||||| |||||| || ||||||||||| || |||| ||||||||    
T  43557893 ataatgttctatcataaaccatatttcgatccaactcaataatctccaaatcttt 43557947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 114
Target Start/End: Original strand, 408493 - 408542
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggat 114  Q
    ||||||||||| ||||||||||| |||||||||||| || | ||||||||    
T  408493 aacaacaacaaccaagccttatcccactaagtggggtcggctacatggat 408542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 2645273 - 2645224
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggat 114  Q
    ||||||||||| ||||||||||| |||||||| |||||| | ||||||||    
T  2645273 aacaacaacaaccaagccttatcccactaagtagggccggctacatggat 2645224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 35615505 - 35615440
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 186  Q
    |||||||||||||||| || ||| ||  ||||||||||||| ||||||||| ||| | ||||||||    
T  35615505 ataatgttctatcataaactatatttttatccaactcattaatctctaaatttttatgaatagttt 35615440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 138 - 199
Target Start/End: Complemental strand, 36200934 - 36200874
Alignment:
Q  138 accatagttggatccaactcattattctctaaatcttttttaatagtttatcttaggtcttc 199  Q
    |||||| |||||||||||||||||  ||||| ||||||| ||||||||| || |||||||||    
T  36200934 accatatttggatccaactcattaacctctatatcttttataatagtttttc-taggtcttc 36200874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 159
Target Start/End: Complemental strand, 38830602 - 38830504
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatgg----attacgctataatgttctatcatataccatagttggatccaactcat 159  Q
    ||||||||||| ||| |||| || |||||||||||| |  | ||||||    |||||||||||||||||||||||| | |||| || | ||||||||||    
T  38830602 aacaacaacaaccaaaccttttcccactaagtggggtcagctacatggatcaattacgctataatgttctatcatacatcatatttcggtccaactcat 38830504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 4653540 - 4653500
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtgggg 100  Q
    |||| ||||||||||| |||| |||||||||||||||||||    
T  4653540 acaacaacaacaacaaccaagtcttatctcactaagtgggg 4653500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 9234174 - 9234134
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtgggg 100  Q
    ||||| |||||||||| ||||||||||| ||||||||||||    
T  9234174 acaaatacaacaacaatcaagccttatcccactaagtgggg 9234134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 29929342 - 29929302
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtgggg 100  Q
    |||| ||||||||||| ||||||||||| ||||||||||||    
T  29929342 acaacaacaacaacaaccaagccttatcccactaagtgggg 29929302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 32442177 - 32442225
Alignment:
Q  113 attacgctataatgttctatcatataccatagttggatccaactcatta 161  Q
    ||||||| |||||||||||||  | |||||| |||||||||||||||||    
T  32442177 attacgccataatgttctatccaaaaccatatttggatccaactcatta 32442225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 192
Target Start/End: Original strand, 34504 - 34636
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcat 159  Q
    ||||||||||| |||| |||||| |||||||||||| |  | ||||||||     ||||| |||||||||||||||| |||||| ||  |||||||||||    
T  34504 aacaacaacaaccaagtcttatcccactaagtggggtcagctacatggatcaaattacgccataatgttctatcataaaccatatttcaatccaactcat 34603  T
Q  160 tattctctaaatcttttttaatagtttatctta 192  Q
    || ||| || |||||| ||||| |||| |||||    
T  34604 taatctttagatctttcttaatggtttctctta 34636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 160
Target Start/End: Complemental strand, 12890858 - 12890758
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcat 159  Q
    ||||||||||| ||||||||||| |||||||||||| || | ||||||     ||||||| ||| |||||||||||| |||||| ||||||| |||||||    
T  12890858 aacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccatagtgttctatcataaaccatatttggatctaactcat 12890759  T
Q  160 t 160  Q
    |    
T  12890758 t 12890758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 186
Target Start/End: Original strand, 34143758 - 34143890
Alignment:
Q  59 gacaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatcca 153  Q
    ||||| ||||||||||| ||||||||||| || ||||||||| |||| ||||||     || |||| ||| |||||||||||| |||| | |||||||||    
T  34143758 gacaacaacaacaacaaccaagccttatcccaataagtggggtcgactacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatcca 34143857  T
Q  154 actcattattctctaaatcttttttaatagttt 186  Q
    |||||||   ||||||||| ||| |||| ||||    
T  34143858 actcattgacctctaaatcctttgtaatggttt 34143890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 186
Target Start/End: Original strand, 34156374 - 34156506
Alignment:
Q  59 gacaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatcca 153  Q
    ||||| ||||||||||| ||||||||||| || ||||||||| |||| ||||||     || |||| ||| |||||||||||| |||| | |||||||||    
T  34156374 gacaacaacaacaacaaccaagccttatcccaataagtggggtcgactacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatcca 34156473  T
Q  154 actcattattctctaaatcttttttaatagttt 186  Q
    |||||||   ||||||||| ||| |||| ||||    
T  34156474 actcattgacctctaaatcctttgtaatggttt 34156506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 121 - 192
Target Start/End: Original strand, 9593768 - 9593839
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    |||||||||||||||| |||||| | ||||||||||||||| ||||||| |||||  ||||||||| |||||    
T  9593768 ataatgttctatcataaaccatattgggatccaactcattaatctctaagtctttcctaatagtttctctta 9593839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 185
Target Start/End: Complemental strand, 5897740 - 5897615
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcat 159  Q
    ||||||||||| ||||||||||| |||||||||||  |  | ||||||||     ||||  ||||| ||||| ||||||||||| || |||||||| |||    
T  5897740 aacaacaacaatcaagccttatcccactaagtgggatccgctacatggatcaaattacgtcataatattctaccatataccatattttgatccaacacat 5897641  T
Q  160 tattctctaaatcttttttaatagtt 185  Q
    || | |||||||||||| ||||||||    
T  5897640 taatatctaaatcttttctaatagtt 5897615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 172
Target Start/End: Complemental strand, 9707052 - 9706941
Alignment:
Q  66 acaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 160  Q
    |||||||||| ||||||||||| |||||||||||| || | ||||||     || | || ||| |||||||||| | |||||| ||||||||||||||||    
T  9707052 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgatgccatagtgttctatcaaaaaccatatttggatccaactcatt 9706953  T
Q  161 attctctaaatc 172  Q
    |  |||||||||    
T  9706952 aacctctaaatc 9706941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 186
Target Start/End: Complemental strand, 28085664 - 28085533
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaa 154  Q
    |||| ||||||||||| ||||||||||| |||||||||||| || | ||||||     || || | ||| |||||||||||| |||| | ||||||||||    
T  28085664 acaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacaccatagtgttctatcatacaccaaatttggatccaa 28085565  T
Q  155 ctcattattctctaaatcttttttaatagttt 186  Q
    ||||||   ||||||||| ||| |||| ||||    
T  28085564 ctcattgacctctaaatcctttctaatggttt 28085533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 192
Target Start/End: Complemental strand, 31818753 - 31818682
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    |||||||||||||||| |||||| || |||||||||||||| |||| ||| ||||  ||||||||| |||||    
T  31818753 ataatgttctatcataaaccatactttgatccaactcattaatctccaaacctttcctaatagtttctctta 31818682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 113 - 175
Target Start/End: Complemental strand, 5096064 - 5096002
Alignment:
Q  113 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttt 175  Q
    ||||||| |||||||||||||||| |||||| || ||||||||||||||  | ||||||||||    
T  5096064 attacgccataatgttctatcataaaccatattttgatccaactcattaaccactaaatcttt 5096002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 191
Target Start/End: Complemental strand, 24666033 - 24665963
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctt 191  Q
    |||||||||||||||| |||||| || |||||||||||||   |||||||| ||| |||||||||| ||||    
T  24666033 ataatgttctatcataaaccatatttcgatccaactcattgacctctaaatatttcttaatagtttctctt 24665963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 186
Target Start/End: Original strand, 14389213 - 14389286
Alignment:
Q  113 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 186  Q
    |||||||  ||||||| ||||||| |||||| ||||||| |||| |||| ||||||||||||| |||| |||||    
T  14389213 attacgccctaatgttatatcataaaccatatttggatctaacttattaatctctaaatctttcttaagagttt 14389286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 192
Target Start/End: Original strand, 43119 - 43183
Alignment:
Q  128 tctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    ||||||||| || ||| || |||||||||||||| |||||| |||||| |||||||||| |||||    
T  43119 tctatcataaactatattttgatccaactcattactctctagatctttattaatagtttctctta 43183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 186
Target Start/End: Original strand, 1748006 - 1748070
Alignment:
Q  122 taatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 186  Q
    |||||||||||||||||| ||| ||  ||||||||||||| ||||||||| ||| ||| ||||||    
T  1748006 taatgttctatcatatactatatttctatccaactcattaatctctaaatttttcttagtagttt 1748070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 192
Target Start/End: Complemental strand, 8364839 - 8364707
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcat 159  Q
    |||||||||||  ||||||| || ||||||| |||| || | ||||||||     ||||| |||||||||||||||| |||||  ||   ||||||| ||    
T  8364839 aacaacaacaataaagccttttcccactaagcggggtcggctacatggatcaaattacgccataatgttctatcataaaccatgtttcagtccaacttat 8364740  T
Q  160 tattctctaaatcttttttaatagtttatctta 192  Q
    || | ||||||||||| |||||||||| |||||    
T  8364739 taatttctaaatctttcttaatagtttctctta 8364707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 10098890 - 10099019
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatggattacgcta---taatgttctatcatataccatagttggatccaact 156  Q
    |||| ||||||||||| |||| |||||| |||||||||||| |||  |||||||| |    |   || |||||||||||| |||||| ||  ||||||||    
T  10098890 acaacaacaacaacaatcaagtcttatcccactaagtggggtcgattacatggatcaaatgacgttagtgttctatcatacaccatatttaaatccaact 10098989  T
Q  157 cattattctctaaatcttttttaatagttt 186  Q
    ||||   |||||||||||||||||| ||||    
T  10098990 cattgacctctaaatcttttttaatggttt 10099019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 66 - 160
Target Start/End: Original strand, 34934830 - 34934929
Alignment:
Q  66 acaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 160  Q
    |||||||||| ||||||||||| |||||||||||| || | ||||||     || | || ||| |||||||||||| |||| | ||||||||||||||||    
T  34934830 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgaggccatagtgttctatcatacaccaaatttggatccaactcatt 34934929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 192
Target Start/End: Original strand, 6055832 - 6055902
Alignment:
Q  122 taatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    ||||||||||| ||| || ||| ||||||| |||||||||  ||||||||||||  ||||||||| |||||    
T  6055832 taatgttctattatacactatatttggatctaactcattaacctctaaatctttcataatagtttctctta 6055902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 114
Target Start/End: Original strand, 12133900 - 12133950
Alignment:
Q  64 aaacaacaacaagcaagccttatctcactaagtggggccgacgacatggat 114  Q
    |||||||||||| |||||||| ||||||||||||||| || | ||||||||    
T  12133900 aaacaacaacaaccaagccttttctcactaagtggggtcggctacatggat 12133950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 186
Target Start/End: Complemental strand, 30031535 - 30031413
Alignment:
Q  69 acaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcattatt 163  Q
    ||||||| ||||||||||| ||||||||| || || | ||||||     ||||||| ||| |||||||||||| |||||| ||  ||||||||||||       
T  30031535 acaacaaccaagccttatcccactaagtgaggtcggctacatggatcaaattacgccatagtgttctatcataaaccatatttaaatccaactcattgac 30031436  T
Q  164 ctctaaatcttttttaatagttt 186  Q
    ||||||||| ||| |||| ||||    
T  30031435 ctctaaatcctttctaattgttt 30031413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 186
Target Start/End: Complemental strand, 32756148 - 32756078
Alignment:
Q  116 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 186  Q
    |||| ||| |||||||||||| |||| | ||||||||||||||||   ||||||||||||| |||| ||||    
T  32756148 acgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcttttctaatggttt 32756078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 113 - 170
Target Start/End: Complemental strand, 9568929 - 9568872
Alignment:
Q  113 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaa 170  Q
    ||||||| |||| | ||||||||| |||||| |||||||||||||| || ||||||||    
T  9568929 attacgccataacggtctatcataaaccatatttggatccaactcaataatctctaaa 9568872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 186
Target Start/End: Original strand, 18238210 - 18238270
Alignment:
Q  127 ttctatcatataccatagttggatccaactcattattctctaaatcttt-tttaatagttt 186  Q
    |||||||||||| |||| ||  ||||||||||||| ||| ||||||||| |||||||||||    
T  18238210 ttctatcatatatcatatttttatccaactcattaatctgtaaatctttctttaatagttt 18238270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 100
Target Start/End: Complemental strand, 20864867 - 20864835
Alignment:
Q  68 aacaacaagcaagccttatctcactaagtgggg 100  Q
    |||||||| ||||||||||||||||||||||||    
T  20864867 aacaacaaccaagccttatctcactaagtgggg 20864835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 31831920 - 31831984
Alignment:
Q  123 aatgttctatcatata-ccatagttggatccaactcattattctctaaatcttttttaatagttt 186  Q
    |||||||||||||| | ||||  |||||||||||||| || |||||| |||||| ||||||||||    
T  31831920 aatgttctatcataaaaccatgtttggatccaactcagtaatctctagatctttcttaatagttt 31831984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 114
Target Start/End: Complemental strand, 33730247 - 33730199
Alignment:
Q  66 acaacaacaagcaagccttatctcactaagtggggccgacgacatggat 114  Q
    |||||||||| ||||||||||| |||||||||||| || | ||||||||    
T  33730247 acaacaacaaccaagccttatcccactaagtggggtcggctacatggat 33730199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 186
Target Start/End: Original strand, 947 - 1073
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcat 159  Q
    ||||||||||| ||||||||||| |||||| ||||| |  | |||||||| |     ||| ||| |||||||||||| |||| | |||||||||||||||    
T  947 aacaacaacaaccaagccttatcccactaaatggggtcagctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcat 1046  T
Q  160 tattctctaaatcttttttaatagttt 186  Q
    |   |||||||||||||||||| ||||    
T  1047 tgacctctaaatcttttttaatggttt 1073  T

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Target: scaffold0041 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 186
Target Start/End: Complemental strand, 16860 - 16735
Alignment:
Q  66 acaacaacaagcaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcatt 160  Q
    |||||||||| ||||||||||| |||||||||| | || | |||| ||| |     ||| ||| |||||||||| | |||||| ||||||||||||||||    
T  16860 acaacaacaaccaagccttatcccactaagtggagtcggctacatagatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcatt 16761  T
Q  161 attctctaaatcttttttaatagttt 186  Q
       ||||||||||||| |||| ||||    
T  16760 gacctctaaatcttttctaatggttt 16735  T

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Target: scaffold1318 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 64 - 186
Target Start/End: Complemental strand, 615 - 488
Alignment:
Q  64 aaacaacaacaagcaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactca 158  Q
    |||||||||||| ||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||| | |||| | |||||||    
T  615 aaacaacaacaatcaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttgggtacaactca 516  T
Q  159 ttattctctaaatcttttttaatagttt 186  Q
    ||   ||||||||| ||| |||| ||||    
T  515 ttgacctctaaatcctttctaatggttt 488  T

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Target: scaffold0279 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 149 - 192
Target Start/End: Complemental strand, 17733 - 17690
Alignment:
Q  149 atccaactcattattctctaaatcttttttaatagtttatctta 192  Q
    ||||||| ||||| |||||||||||||||||||||||| |||||    
T  17733 atccaacccattaatctctaaatcttttttaatagtttctctta 17690  T

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Target: scaffold0180 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 25503 - 25569
Alignment:
Q  121 ataatgttctatcatataccatagttggatccaactcattattctctaaatc-ttttttaatagttt 186  Q
    |||||||| ||||||||| | || ||  ||||||||||||| |||||||||| ||||||||||||||    
T  25503 ataatgttttatcatataacttatttctatccaactcattaatctctaaatcattttttaatagttt 25569  T

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Target: scaffold0168 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 114
Target Start/End: Original strand, 28883 - 28937
Alignment:
Q  60 acaaaaacaacaacaagcaagccttatctcactaagtggggccgacgacatggat 114  Q
    |||| ||||||||||| ||||||||||| |||||||||||| || | ||||||||    
T  28883 acaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggat 28937  T

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Target: scaffold0025 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 175
Target Start/End: Complemental strand, 39549 - 39487
Alignment:
Q  113 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttt 175  Q
    ||||||| || ||||||||||||| |||| | |||||||||||||||||   |||||||||||    
T  39549 attacgccatcatgttctatcataaaccacatttggatccaactcattaccatctaaatcttt 39487  T

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Target: scaffold0010 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 191
Target Start/End: Original strand, 160376 - 160454
Alignment:
Q  113 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctt 191  Q
    ||||||| |||||||||||||||| |||||| || | || ||||||||| | ||| |||||||  ||||||||| ||||    
T  160376 attacgccataatgttctatcataaaccatatttcggtcgaactcattaatttcttaatctttcctaatagtttctctt 160454  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 31751 - 31702
Alignment:
Q  65 aacaacaacaagcaagccttatctcactaagtggggccgacgacatggat 114  Q
    ||||||||||| ||||||||||| |||||||||||| || | ||||||||    
T  31751 aacaacaacaaccaagccttatcccactaagtggggtcggctacatggat 31702  T

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