View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5690-Insertion-3 (Length: 622)

Name: NF5690-Insertion-3
Description: NF5690
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5690-Insertion-3
NF5690-Insertion-3
[»] chr5 (14 HSPs)
chr5 (8-536)||(41609506-41610037)
chr5 (410-533)||(14098350-14098473)
chr5 (407-532)||(210371-210496)
chr5 (428-508)||(33573281-33573361)
chr5 (428-531)||(4084710-4084813)
chr5 (483-533)||(29630393-29630442)
chr5 (407-512)||(10951307-10951412)
chr5 (58-126)||(18862304-18862371)
chr5 (496-535)||(14098305-14098344)
chr5 (465-535)||(26015501-26015571)
chr5 (489-531)||(19119679-19119720)
chr5 (474-512)||(24180742-24180780)
chr5 (435-504)||(4427902-4427971)
chr5 (471-512)||(24180018-24180059)
[»] chr3 (19 HSPs)
chr3 (8-536)||(49308129-49308656)
chr3 (293-470)||(26250201-26250378)
chr3 (407-536)||(53467210-53467339)
chr3 (415-533)||(37915410-37915528)
chr3 (407-536)||(1093172-1093300)
chr3 (407-536)||(50704275-50704396)
chr3 (559-622)||(10973106-10973169)
chr3 (485-536)||(49308833-49308884)
chr3 (462-536)||(50703742-50703816)
chr3 (427-512)||(46889349-46889434)
chr3 (434-508)||(20111849-20111923)
chr3 (428-511)||(36863910-36863992)
chr3 (462-535)||(46915796-46915868)
chr3 (491-536)||(55337591-55337635)
chr3 (502-533)||(51149164-51149195)
chr3 (501-536)||(55336838-55336873)
chr3 (482-536)||(18387646-18387699)
chr3 (491-536)||(25080815-25080859)
chr3 (491-536)||(25081550-25081594)
[»] chr8 (3 HSPs)
chr8 (414-536)||(20105000-20105122)
chr8 (445-508)||(44495085-44495148)
chr8 (58-126)||(25230032-25230099)
[»] chr4 (12 HSPs)
chr4 (407-536)||(51702666-51702795)
chr4 (407-536)||(24844084-24844213)
chr4 (415-535)||(49648163-49648283)
chr4 (407-533)||(33114086-33114215)
chr4 (408-532)||(49479909-49480031)
chr4 (428-533)||(11380933-11381037)
chr4 (428-508)||(50185306-50185386)
chr4 (407-467)||(50848409-50848469)
chr4 (407-480)||(12920401-12920474)
chr4 (426-505)||(5941321-5941400)
chr4 (474-512)||(52255425-52255463)
chr4 (428-508)||(52305686-52305766)
[»] chr7 (15 HSPs)
chr7 (407-534)||(32577294-32577420)
chr7 (407-533)||(9146066-9146192)
chr7 (414-533)||(12294201-12294320)
chr7 (427-536)||(42745633-42745742)
chr7 (434-536)||(12293465-12293567)
chr7 (428-508)||(42418161-42418241)
chr7 (490-535)||(7831633-7831678)
chr7 (462-536)||(41115465-41115538)
chr7 (440-506)||(32576627-32576692)
chr7 (462-533)||(18977844-18977914)
chr7 (489-531)||(32949844-32949885)
chr7 (462-536)||(44545238-44545311)
chr7 (489-534)||(7832382-7832426)
chr7 (491-524)||(13784053-13784086)
chr7 (491-531)||(9146983-9147022)
[»] scaffold0136 (1 HSPs)
scaffold0136 (407-533)||(23650-23776)
[»] chr2 (12 HSPs)
chr2 (415-534)||(42847933-42848052)
chr2 (426-534)||(45632361-45632468)
chr2 (407-499)||(1678296-1678388)
chr2 (426-535)||(42848595-42848704)
chr2 (443-536)||(1677569-1677662)
chr2 (407-508)||(30266349-30266450)
chr2 (556-614)||(74379-74437)
chr2 (462-536)||(44356814-44356887)
chr2 (431-508)||(25616878-25616955)
chr2 (462-533)||(44357569-44357639)
chr2 (428-522)||(28682429-28682522)
chr2 (58-126)||(38798802-38798869)
[»] chr1 (8 HSPs)
chr1 (423-508)||(23732875-23732960)
chr1 (428-533)||(51097517-51097621)
chr1 (428-536)||(19534719-19534826)
chr1 (490-536)||(36930179-36930225)
chr1 (407-478)||(28763097-28763168)
chr1 (490-527)||(43250883-43250920)
chr1 (430-468)||(12644173-12644211)
chr1 (491-531)||(3929194-3929233)
[»] scaffold0021 (1 HSPs)
scaffold0021 (555-622)||(120556-120623)
[»] chr6 (5 HSPs)
chr6 (430-508)||(18970597-18970675)
chr6 (462-536)||(22046427-22046500)
chr6 (462-536)||(22058835-22058908)
chr6 (471-512)||(18242694-18242735)
chr6 (462-533)||(22047182-22047252)
[»] scaffold0154 (1 HSPs)
scaffold0154 (470-521)||(7469-7520)


Alignment Details
Target: chr5 (Bit Score: 489; Significance: 0; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 489; E-Value: 0
Query Start/End: Original strand, 8 - 536
Target Start/End: Complemental strand, 41610037 - 41609506
Alignment:
Q  8 ccttctttatctcgtgggtactattatcatagtaaaaaattgcatgt--gtgtctttttcttccacaattgctaaagtccttagaaacatccc-tttgat 104  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  41610037 ccttctttatctcgtgggtactattatcatagtaagaaattgcatgtttgtgtctttttcttccacaattgttaaagtccttagaaacatcccctttgat 41609938  T
Q  105 tttctaggtttccctttcgttatcttctgtgcatatctaacaacctaaaattatcatatccaagcaaataattatcaagtgcaattttataaaaactatg 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  41609937 tttctaggtttccctttcgttatcttctgtgcatatctaacaacctaaaattatcatatccaagcaaataattatcaagtgcaattttataaaaattatg 41609838  T
Q  205 aaattcaaacaacagaactttctcatacaaaaatcccatgaatttatgccaacattaatttcatgggtaatccaccactgtttcgtaccaatatagtcat 304  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41609837 aaattcaaacaacagaactttctcaaacaaaaatcccatgaatttatgccaacattaatttcatgggtaatccaccactgtttcgtaccaatatagtcat 41609738  T
Q  305 gtagcctttcaattttaatgattcaggcttaatcgaatttgaagaaaaagaggggaaaaactggaatcgtagcaggctatgaggataggggtgacccttt 404  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41609737 gtagcctttcaattttaatgattgaggcttaatcgaatttgaagaaaaagaggggaaaaactggaatcgtagcaggctatgaggataggggtgacccttt 41609638  T
Q  405 ttaaaggtggaggttgtagtgcatgaccctttttaaagagcaattaaatctgaagcgttgattttgatccaatggttcaaattaattcctctcatcctct 504  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  41609637 ttaaaggtggaggttgtagtgcatgaccctttttaaagagcaattaaatctgatgcgttgattttgatccaatggttcaaattaattcctctcatcctct 41609538  T
Q  505 cattataactactcctctcacttgatatgccc 536  Q
    ||||||||||||||||||||||||||||||||    
T  41609537 cattataactactcctctcacttgatatgccc 41609506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 410 - 533
Target Start/End: Original strand, 14098350 - 14098473
Alignment:
Q  410 ggtggaggttgtagtgcatgaccctttttaaagagcaattaaatctgaagcgttgattttgatccaatggttcaaattaattcctctcatcctctcatta 509  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||     
T  14098350 ggtggaggttgtagtgcatgaccctttttaaagagcaattaaatctgaagcgttgattttgttccaatggtccaaattaattcctgtcatcctctcattg 14098449  T
Q  510 taactactcctctcacttgatatg 533  Q
    ||||||||||||||||||||||||    
T  14098450 taactactcctctcacttgatatg 14098473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 407 - 532
Target Start/End: Original strand, 210371 - 210496
Alignment:
Q  407 aaaggtggaggttgtagtgcatgaccctttttaaagagcaattaaatctgaagcgttgattttgatccaatggttcaaattaattcctctcatcctctca 506  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || |||||||||| |||||||||||    
T  210371 aaaggtagaggttgtagtgcatgaccctttttaaagagcaattaaatctaaagcgttgattttgatccaatggtccagattaattcctttcatcctctca 210470  T
Q  507 ttataactactcctctcacttgatat 532  Q
    || |||||||| |||||| |||||||    
T  210471 ttctaactacttctctcatttgatat 210496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 428 - 508
Target Start/End: Complemental strand, 33573361 - 33573281
Alignment:
Q  428 tgaccctttttaaagagcaattaaatctgaagcgttgattttgatccaatggttcaaattaattcctctcatcctctcatt 508  Q
    |||||||||| ||||| ||||||||||||| ||||||||||||||| || |||  |||||||||||||||| |||||||||    
T  33573361 tgacccttttgaaagaacaattaaatctgaggcgttgattttgatctaacggtctaaattaattcctctcagcctctcatt 33573281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 428 - 531
Target Start/End: Original strand, 4084710 - 4084813
Alignment:
Q  428 tgaccctttttaaagagcaattaaatctgaagcgttgattttgatccaatggttcaaattaattcctctcatcctctcattataactactcctctcactt 527  Q
    |||||||||||||||| ||||| ||||||| ||||| |||||||||| | ||| || |||| ||||||||| |||||||||||||    |||||||||||    
T  4084710 tgaccctttttaaagaacaatttaatctgaggcgtttattttgatccgacggtccacattatttcctctcaccctctcattataaaatgtcctctcactt 4084809  T
Q  528 gata 531  Q
    ||||    
T  4084810 gata 4084813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 483 - 533
Target Start/End: Complemental strand, 29630442 - 29630393
Alignment:
Q  483 aaattaattcctctcatcctctcattataactactcctctcacttgatatg 533  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  29630442 aaattaattcctctcatc-tctcattataactactcctctcacttgatatg 29630393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 407 - 512
Target Start/End: Complemental strand, 10951412 - 10951307
Alignment:
Q  407 aaaggtggaggttgtagtgcatgaccctttttaaagagcaattaaatctgaagcgttgattttgatccaatggttcaaattaattcctctcatcctctca 506  Q
    ||||||| ||| ||||||   |||||||| ||||||| ||||| ||||||| |||||||||||||||| |  || || |||| ||||||||| |||||||    
T  10951412 aaaggtgtaggatgtagtatgtgacccttcttaaagaacaatttaatctgaggcgttgattttgatccgacagtccacattatttcctctcaccctctca 10951313  T
Q  507 ttataa 512  Q
    ||||||    
T  10951312 ttataa 10951307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 58 - 126
Target Start/End: Original strand, 18862304 - 18862371
Alignment:
Q  58 tctttttcttccacaattgctaaagtccttagaaacatccctttgattttctaggtttccctttcgtta 126  Q
    |||||||||| |||||||| | || |||||||||| | |||||||||||||||||||||| ||||||||    
T  18862304 tctttttctttcacaattgttcaa-tccttagaaaaacccctttgattttctaggtttccatttcgtta 18862371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 496 - 535
Target Start/End: Complemental strand, 14098344 - 14098305
Alignment:
Q  496 tcatcctctcattataactactcctctcacttgatatgcc 535  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  14098344 tcatcctctcattataactactcctctctcttgatatgcc 14098305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 465 - 535
Target Start/End: Complemental strand, 26015571 - 26015501
Alignment:
Q  465 attttgatccaatggttcaaattaattcctctcatcctctcattataactactcctctcacttgatatgcc 535  Q
    |||||||||||| || | | |||||||||||||| |||||||||  |  ||||||||||||||||||||||    
T  26015571 attttgatccaaaggatgatattaattcctctcaccctctcatttaagttactcctctcacttgatatgcc 26015501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 489 - 531
Target Start/End: Original strand, 19119679 - 19119720
Alignment:
Q  489 attcctctcatcctctcattataactactcctctcacttgata 531  Q
    ||||||||||||||||||||||||| |||||||||| ||||||    
T  19119679 attcctctcatcctctcattataac-actcctctcatttgata 19119720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 512
Target Start/End: Original strand, 24180742 - 24180780
Alignment:
Q  474 caatggttcaaattaattcctctcatcctctcattataa 512  Q
    |||||||| | ||||||||||||||||||||||||||||    
T  24180742 caatggttaatattaattcctctcatcctctcattataa 24180780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 504
Target Start/End: Complemental strand, 4427971 - 4427902
Alignment:
Q  435 ttttaaagagcaattaaatctgaagcgttgattttgatccaatggttcaaattaattcctctcatcctct 504  Q
    ||||||||||||||||||| | ||| || ||||| ||| ||| |||  |||||||||||||||| |||||    
T  4427971 ttttaaagagcaattaaatttaaagtgtcgatttagattcaacggtctaaattaattcctctcaccctct 4427902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 471 - 512
Target Start/End: Complemental strand, 24180059 - 24180018
Alignment:
Q  471 atccaatggttcaaattaattcctctcatcctctcattataa 512  Q
    ||||||||||| | || |||||||||||||||||||||||||    
T  24180059 atccaatggttaatatcaattcctctcatcctctcattataa 24180018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 475; Significance: 0; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 475; E-Value: 0
Query Start/End: Original strand, 8 - 536
Target Start/End: Complemental strand, 49308656 - 49308129
Alignment:
Q  8 ccttctttatctcgtgggtactattatcatagtaaaaaattgcatgt--gtgtctttttcttccacaattgctaaagtccttagaaacatccc-tttgat 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  49308656 ccttctttatctcgtgggtactattatcatagtaaaaaattgcatgttcgtgtctttttcttccacaattgttaaagtccttagaaacatcccctttgat 49308557  T
Q  105 tttctaggtttccctttcgttatcttctgtgcatatctaacaacctaaaattatcatatccaagcaaataattatcaagtgcaattttataaaaactatg 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49308556 tttctaggtttccctttcgttatcttctgtgcatatctaacaacctaaaattatcatatccaagcaaataattatcaagtgcaattttataaaaactatg 49308457  T
Q  205 aaattcaaacaacagaactttctcatacaaaaatcccatgaatttatgccaacattaatttcatgggtaatccaccactgtttcgtaccaatatagtcat 304  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||    
T  49308456 aaattcaaacaacagaactttctcatacaaaaatcccatgaatttatgccaacattaatttcatgggtaatccaccactgtttcgtacc---atagtcat 49308360  T
Q  305 gtagcctttcaattttaatgattcaggcttaatcgaatttgaagaaaaagaggggaaaaactggaatcgtagcaggctatgaggataggggtgacccttt 404  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  49308359 gtagcctttcaattttaatgattcaggcttaatcgaatttgaagaaaaagaggggaaaaactggaatcgtagcatgctatgaggataggggtgacccttt 49308260  T
Q  405 ttaaaggtggaggttgtagtgcatgaccctttttaaagagcaattaaatctgaagcgttgattttgatccaatggttcaaattaattcctctcatcctct 504  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  49308259 ttaaa-gtggaggttgtagtgcatgaccctttttaaagagcaattaaatctgaagcgttgattttgatccaatgatccaaattaattcctctcatcctct 49308161  T
Q  505 cattataactactcctctcacttgatatgccc 536  Q
    ||||||||||||||||||||||||||||||||    
T  49308160 cattataactactcctctcacttgatatgccc 49308129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 293 - 470
Target Start/End: Complemental strand, 26250378 - 26250201
Alignment:
Q  293 caatatagtcatgtagcctttcaattttaatgattcaggcttaatcgaatttgaagaaaaagaggggaaaaactggaatcgtagcaggctatgaggatag 392  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||    
T  26250378 caatatagtcatgtagcctttcaattttaatgattcaggcttaatcgaatttgaagaaaaagagggggaaaattggaatcgtagtaggctatgaggatag 26250279  T
Q  393 gggtgaccctttttaaaggtggaggttgtagtgcatgaccctttttaaagagcaattaaatctgaagcgttgattttg 470  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26250278 gggtgatcctttttaaaggtggaggttgtagtgcatgaccctttttaaagagcaattaaatctgaagcgttgattttg 26250201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 407 - 536
Target Start/End: Original strand, 53467210 - 53467339
Alignment:
Q  407 aaaggtggaggttgtagtgcatgaccctttttaaagagcaattaaatctgaagcgttgattttgatccaatggttcaaattaattcctctcatcctctca 506  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | || ||||||||||||||||||||||    
T  53467210 aaaggtagaggttgtagtgcatgaccctttttaaagagcaattaaatttgaagcgttgattttgatccaatgatccagattaattcctctcatcctctca 53467309  T
Q  507 ttataactactcctctcacttgatatgccc 536  Q
    ||||||||||||||| ||||||||||||||    
T  53467310 ttataactactcctcccacttgatatgccc 53467339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 415 - 533
Target Start/End: Complemental strand, 37915528 - 37915410
Alignment:
Q  415 aggttgtagtgcatgaccctttttaaagagcaattaaatctgaagcgttgattttgatccaatggttcaaattaattcctctcatcctctcattataact 514  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||    
T  37915528 aggttgtagtgcatgaccctttttaaagaacaattaaatctgaagcgttgattttgatccaatggtctagattaattcctctcatcctctcattataact 37915429  T
Q  515 actcctctcacttgatatg 533  Q
    |||||||||||||||||||    
T  37915428 actcctctcacttgatatg 37915410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 407 - 536
Target Start/End: Complemental strand, 1093300 - 1093172
Alignment:
Q  407 aaaggtggaggttgtagtgcatgaccctttttaaagagcaattaaatctgaagcgttgattttgatccaatggttcaaattaattcctctcatcctctca 506  Q
    ||||||||||| |||||||||||||||||||||||||||||| | ||||||| ||||||||| ||||||| |||  ||||||||||||||||| ||||||    
T  1093300 aaaggtggaggatgtagtgcatgaccctttttaaagagcaataacatctgaaacgttgatttagatccaacggtctaaattaattcctctcat-ctctca 1093202  T
Q  507 ttataactactcctctcacttgatatgccc 536  Q
    || |||||||||||||||||||||||||||    
T  1093201 ttgtaactactcctctcacttgatatgccc 1093172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 407 - 536
Target Start/End: Original strand, 50704275 - 50704396
Alignment:
Q  407 aaaggtggaggttgtagtgcatgaccctttttaaagagcaattaaatctgaagcgttgattttgatccaatggttcaaattaattcctctcatcctctca 506  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||||| |         
T  50704275 aaaggtagaggttgtagtgcatgaccctttttaaaaagcaattaaatctgaagcgttgattttgatccaatggtccagattaattcctctcattcg---- 50704370  T
Q  507 ttataactactcctctcacttgatatgccc 536  Q
        ||||||||||||||||||||||||||    
T  50704371 ----aactactcctctcacttgatatgccc 50704396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 559 - 622
Target Start/End: Complemental strand, 10973169 - 10973106
Alignment:
Q  559 gatccattgactctaagagtaactctattgatttactccaaatcttatcccttaatattgctgc 622  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  10973169 gatccattgactctaagagtaactctattgacttactccaaatcttatcccttaatattgctgc 10973106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 485 - 536
Target Start/End: Original strand, 49308833 - 49308884
Alignment:
Q  485 attaattcctctcatcctctcattataactactcctctcacttgatatgccc 536  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49308833 attaattcctctcatcctctcattataactactcctctcacttgatatgccc 49308884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 462 - 536
Target Start/End: Complemental strand, 50703816 - 50703742
Alignment:
Q  462 ttgattttgatccaatggttcaaattaattcctctcatcctctcattataactactcctctcacttgatatgccc 536  Q
    |||||||||||||||||| | |  || |||||||||||||||||||| |||||||||||||||||||||||||||    
T  50703816 ttgattttgatccaatggctgaggtttattcctctcatcctctcattttaactactcctctcacttgatatgccc 50703742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 427 - 512
Target Start/End: Complemental strand, 46889434 - 46889349
Alignment:
Q  427 atgaccctttttaaagagcaattaaatctgaagcgttgattttgatccaatggttcaaattaattcctctcatcctctcattataa 512  Q
    ||||||||||| ||||| ||||||||||||| | ||||||||||||| || |||  |||||||||||||||| |||||||||||||    
T  46889434 atgacccttttgaaagaacaattaaatctgaggtgttgattttgatctaacggtctaaattaattcctctcaccctctcattataa 46889349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 434 - 508
Target Start/End: Original strand, 20111849 - 20111923
Alignment:
Q  434 tttttaaagagcaattaaatctgaagcgttgattttgatccaatggttcaaattaattcctctcatcctctcatt 508  Q
    ||||||||||| |||||||| |||||||| ||||| ||||||| | |  ||||||||||||||||||||||||||    
T  20111849 tttttaaagagtaattaaatttgaagcgtcgatttagatccaacgatcaaaattaattcctctcatcctctcatt 20111923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 428 - 511
Target Start/End: Complemental strand, 36863992 - 36863910
Alignment:
Q  428 tgaccctttttaaagagcaattaaatctgaagcgttgattttgatccaatggttcaaattaattcctctcatcctctcattata 511  Q
    ||||||||||||||||||| || |||||||  ||||||||| |||||||  ||  |||||||| |||||||| |||||||||||    
T  36863992 tgaccctttttaaagagcattttaatctgagccgttgatttagatccaacagtctaaattaatccctctcat-ctctcattata 36863910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 462 - 535
Target Start/End: Complemental strand, 46915868 - 46915796
Alignment:
Q  462 ttgattttgatccaatggttcaaattaattcctctcatcctctcattataactactcctctcacttgatatgcc 535  Q
    |||||||||||| ||||||| |  ||  ||||||||||| ||||||| |||| |||||||||||||||||||||    
T  46915868 ttgattttgatctaatggttgaggtttgttcctctcatc-tctcattttaacaactcctctcacttgatatgcc 46915796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 491 - 536
Target Start/End: Original strand, 55337591 - 55337635
Alignment:
Q  491 tcctctcatcctctcattataactactcctctcacttgatatgccc 536  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||    
T  55337591 tcctctcatc-tctcattataattactcctctcacttgatatgccc 55337635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 502 - 533
Target Start/End: Original strand, 51149164 - 51149195
Alignment:
Q  502 tctcattataactactcctctcacttgatatg 533  Q
    ||||||||||||||||||||||||||||||||    
T  51149164 tctcattataactactcctctcacttgatatg 51149195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 501 - 536
Target Start/End: Complemental strand, 55336873 - 55336838
Alignment:
Q  501 ctctcattataactactcctctcacttgatatgccc 536  Q
    |||||||||||| |||||||||||||||||||||||    
T  55336873 ctctcattataattactcctctcacttgatatgccc 55336838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 482 - 536
Target Start/End: Complemental strand, 18387699 - 18387646
Alignment:
Q  482 caaattaattcctctcatcctctcattataactactcctctcacttgatatgccc 536  Q
    |||| |||||||||| ||| ||||||| ||||||||||||||| |||||||||||    
T  18387699 caaaataattcctcttatc-tctcattgtaactactcctctcatttgatatgccc 18387646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 536
Target Start/End: Complemental strand, 25080859 - 25080815
Alignment:
Q  491 tcctctcatcctctcattataactactcctctcacttgatatgccc 536  Q
    |||||||||| ||||| |||||| ||||||||||||||||||||||    
T  25080859 tcctctcatc-tctcactataacaactcctctcacttgatatgccc 25080815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 536
Target Start/End: Original strand, 25081550 - 25081594
Alignment:
Q  491 tcctctcatcctctcattataactactcctctcacttgatatgccc 536  Q
    |||||||||| ||||| |||||| ||||||||||||||||||||||    
T  25081550 tcctctcatc-tctcactataacaactcctctcacttgatatgccc 25081594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 107; Significance: 2e-53; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 414 - 536
Target Start/End: Original strand, 20105000 - 20105122
Alignment:
Q  414 gaggttgtagtgcatgaccctttttaaagagcaattaaatctgaagcgttgattttgatccaatggttcaaattaattcctctcatcctctcattataac 513  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  20105000 gaggttgtagtgcatgaccctttttaaagaccaattaaatctgaagcgttgattttgatccaatgattcagattaattcctctcatcctctcattataac 20105099  T
Q  514 tactcctctcacttgatatgccc 536  Q
    || ||||||||||||||||||||    
T  20105100 tagtcctctcacttgatatgccc 20105122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 445 - 508
Target Start/End: Original strand, 44495085 - 44495148
Alignment:
Q  445 caattaaatctgaagcgttgattttgatccaatggttcaaattaattcctctcatcctctcatt 508  Q
    ||||||||| |||||||||||||| ||||||| |||  |||||||||||||||| |||||||||    
T  44495085 caattaaatttgaagcgttgatttagatccaacggtctaaattaattcctctcaccctctcatt 44495148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 126
Target Start/End: Original strand, 25230032 - 25230099
Alignment:
Q  58 tctttttcttccacaattgctaaagtccttagaaacatccctttgattttctaggtttccctttcgtta 126  Q
    |||||||||| ||| |||| | || |||||||||| | |||||||||||||||||||||| ||||||||    
T  25230032 tctttttctttcacgattgttcaa-tccttagaaaaacccctttgattttctaggtttccatttcgtta 25230099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 106; Significance: 1e-52; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 407 - 536
Target Start/End: Complemental strand, 51702795 - 51702666
Alignment:
Q  407 aaaggtggaggttgtagtgcatgaccctttttaaagagcaattaaatctgaagcgttgattttgatccaatggttcaaattaattcctctcatcctctca 506  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | || ||||||||||||||||||||||    
T  51702795 aaaggtagaggttgtagtgcatgaccctttttaaagagcaattaaatctgaaacgttgattttgatccaatgatccagattaattcctctcatcctctca 51702696  T
Q  507 ttataactactcctctcacttgatatgccc 536  Q
    | ||||||||||||||||||||||||||||    
T  51702695 tcataactactcctctcacttgatatgccc 51702666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 407 - 536
Target Start/End: Complemental strand, 24844213 - 24844084
Alignment:
Q  407 aaaggtggaggttgtagtgcatgaccctttttaaagagcaattaaatctgaagcgttgattttgatccaatggttcaaattaattcctctcatcctctca 506  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||    
T  24844213 aaaggtagaggttgtagtgcatgaccctttttaaagagcaattaaatctgaagcgttgattttgatccaatggttcagattaatttctctcattctctca 24844114  T
Q  507 ttataactactcctctcacttgatatgccc 536  Q
    || || ||| ||||||||||||||||||||    
T  24844113 ttctagctattcctctcacttgatatgccc 24844084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 415 - 535
Target Start/End: Original strand, 49648163 - 49648283
Alignment:
Q  415 aggttgtagtgcatgaccctttttaaagagcaattaaatctgaagcgttgattttgatccaatggttcaaattaattcctctcatcctctcattataact 514  Q
    |||||| ||| ||||||||||||||||| ||||||||||||||||||||||||| |||  |||||| ||||||||||||||||| |||||||||||||||    
T  49648163 aggttgaagtacatgaccctttttaaagtgcaattaaatctgaagcgttgatttagattaaatggtccaaattaattcctctcaccctctcattataact 49648262  T
Q  515 actcctctcacttgatatgcc 535  Q
    |||||||||||||||||||||    
T  49648263 actcctctcacttgatatgcc 49648283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 407 - 533
Target Start/End: Complemental strand, 33114215 - 33114086
Alignment:
Q  407 aaaggtggaggttgtagtgcatgaccctttttaaagagcaattaaatctgaagcgttgattttgatccaatggt---tcaaattaattcctctcatcctc 503  Q
    |||||| |||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||   |   |||||||| | ||||||||    
T  33114215 aaaggtagaggttgtagtgcatgattctttttaaagagtaattaaatctgaagcgttgattttgatccaatggtctatattattaattcttttcatcctc 33114116  T
Q  504 tcattataactactcctctcacttgatatg 533  Q
    ||||||||  ||||||||||||||||||||    
T  33114115 tcattatagttactcctctcacttgatatg 33114086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 408 - 532
Target Start/End: Complemental strand, 49480031 - 49479909
Alignment:
Q  408 aaggtggaggttgtagtgcatgaccctttttaaagagcaattaaatctgaagcgttgattttgatccaatggttcaaattaattcctctcatcctctcat 507  Q
    |||||| ||||||||||| |||| | |||||||| |||||||||||||||| ||||||||||||||||||| || |||||| ||  |||||| |||| ||    
T  49480031 aaggtgaaggttgtagtgtatgatc-tttttaaaaagcaattaaatctgaaacgttgattttgatccaatgatttaaattagtttatctcat-ctctaat 49479934  T
Q  508 tataactactcctctcacttgatat 532  Q
    |||||||  ||||||||||||||||    
T  49479933 tataactcatcctctcacttgatat 49479909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 428 - 533
Target Start/End: Original strand, 11380933 - 11381037
Alignment:
Q  428 tgaccctttttaaagagcaattaaatctgaagcgttgattttgatccaatggttcaaattaattcctctcatcctctcattataactactcctctcactt 527  Q
    |||||| |||||||||||| || ||||| |  | |||||||  |||||| |||  |||||||||||||||||| ||||||||||||||||||||||||||    
T  11380933 tgacccattttaaagagcattttaatctcagcctttgatttaaatccaacggtcgaaattaattcctctcatc-tctcattataactactcctctcactt 11381031  T
Q  528 gatatg 533  Q
    ||||||    
T  11381032 gatatg 11381037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 428 - 508
Target Start/End: Complemental strand, 50185386 - 50185306
Alignment:
Q  428 tgaccctttttaaagagcaattaaatctgaagcgttgattttgatccaatggttcaaattaattcctctcatcctctcatt 508  Q
    |||||||||| ||||| ||||||||||||| ||||||||||||||| || |||  |||||||||||||||| |||||||||    
T  50185386 tgacccttttgaaagaacaattaaatctgaggcgttgattttgatctaacggtctaaattaattcctctcaccctctcatt 50185306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 407 - 467
Target Start/End: Complemental strand, 50848469 - 50848409
Alignment:
Q  407 aaaggtggaggttgtagtgcatgaccctttttaaagagcaattaaatctgaagcgttgatt 467  Q
    ||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  50848469 aaaggtggaggatgtagtgtatgaccctttttaaagagcagttaaatctgaagcgttgatt 50848409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 407 - 480
Target Start/End: Complemental strand, 12920474 - 12920401
Alignment:
Q  407 aaaggtggaggttgtagtgcatgaccctttttaaagagcaattaaatctgaagcgttgattttgatccaatggt 480  Q
    ||||||||||| |||||||||||||||||| ||| ||||||| ||||||||| |||| ||||  ||||||||||    
T  12920474 aaaggtggaggatgtagtgcatgaccctttctaaggagcaataaaatctgaaccgtttatttcaatccaatggt 12920401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 426 - 505
Target Start/End: Original strand, 5941321 - 5941400
Alignment:
Q  426 catgaccctttttaaagagcaattaaatctgaagcgttgattttgatccaatggttcaaattaattcctctcatcctctc 505  Q
    ||||||||||||||| ||||||||| ||||||||||||||||| |||| ||  ||  | |||||||||||||| ||||||    
T  5941321 catgaccctttttaatgagcaattatatctgaagcgttgatttagatctaactgtctatattaattcctctcaccctctc 5941400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 512
Target Start/End: Original strand, 52255425 - 52255463
Alignment:
Q  474 caatggttcaaattaattcctctcatcctctcattataa 512  Q
    |||||||| | ||||||||||||||||||||||||||||    
T  52255425 caatggttaatattaattcctctcatcctctcattataa 52255463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 428 - 508
Target Start/End: Original strand, 52305686 - 52305766
Alignment:
Q  428 tgaccctttttaaagagcaattaaatctgaagcgttgattttgatccaatggttcaaattaattcctctcatcctctcatt 508  Q
    ||||| |||||||||||||||| ||||| | |||||| ||| ||||||| |||| | ||| |  ||||||| |||||||||    
T  52305686 tgaccttttttaaagagcaatttaatctcaggcgttggtttagatccaagggttgagatttaaccctctcaccctctcatt 52305766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 4e-49; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 407 - 534
Target Start/End: Original strand, 32577294 - 32577420
Alignment:
Q  407 aaaggtggaggttgtagtgcatgaccctttttaaagagcaattaaatctgaagcgttgattttgatccaatggttcaaattaattcctctcatcctctca 506  Q
    |||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  32577294 aaaggtagaggttgtagagcatgacc-tttttaaagagcaattaaatctgaagcgttgattttgatccaatggttcagattaattcctctcatcctctca 32577392  T
Q  507 ttataactactcctctcacttgatatgc 534  Q
    || |||| ||||||||||||||||||||    
T  32577393 ttctaacaactcctctcacttgatatgc 32577420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 407 - 533
Target Start/End: Complemental strand, 9146192 - 9146066
Alignment:
Q  407 aaaggtggaggttgtagtgcatgaccctttttaaagagcaattaaatctgaagcgttgattttgatccaatggttcaaattaattcctctcatcctctca 506  Q
    |||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||    
T  9146192 aaaggtagaggttgtagtgaatgaccctttttaaagaacaattaaatctgaagcgttgattttgatccaaatgtccaaattaattcctctcatcctctca 9146093  T
Q  507 ttataactactcctctcacttgatatg 533  Q
    |||||| ||| ||||||||||||||||    
T  9146092 ttataattacacctctcacttgatatg 9146066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 414 - 533
Target Start/End: Original strand, 12294201 - 12294320
Alignment:
Q  414 gaggttgtagtgcatgaccctttttaaagagcaattaaatctgaagcgttgattttgatccaatggttcaaattaattcctctcatcctctcattataac 513  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||  ||     
T  12294201 gaggttgtagtgcatgatcctttttaaagagcaattaaatatgaagcgttgattttgatccaatggttcagattaattcatctcatcctctcatttaaat 12294300  T
Q  514 tactcctctcacttgatatg 533  Q
    ||||||||||||||||||||    
T  12294301 tactcctctcacttgatatg 12294320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 427 - 536
Target Start/End: Complemental strand, 42745742 - 42745633
Alignment:
Q  427 atgaccctttttaaagagcaattaaatctgaagcgttgattttgatccaatggttcaaattaattcctctcatcctctcattataactactcctctcact 526  Q
    ||||| |||||||||| ||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||| |||||||||||| ||||||||    
T  42745742 atgacactttttaaagtgcaattaaatctgaagcgttgatttagatccaacggtccaaattaattcctctcatcctcttattataactactactctcact 42745643  T
Q  527 tgatatgccc 536  Q
    ||||||||||    
T  42745642 tgatatgccc 42745633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 434 - 536
Target Start/End: Complemental strand, 12293567 - 12293465
Alignment:
Q  434 tttttaaagagcaattaaatctgaagcgttgattttgatccaatggttcaaattaattcctctcatcctctcattataactactcctctcacttgatatg 533  Q
    |||||||||| |||||||||||||||||||||||||||||||||| | || ||||||| ||||||||||||||||  |  ||||||||||||||||||||    
T  12293567 tttttaaagaccaattaaatctgaagcgttgattttgatccaatgatccagattaatttctctcatcctctcatttaagttactcctctcacttgatatg 12293468  T
Q  534 ccc 536  Q
    |||    
T  12293467 ccc 12293465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 428 - 508
Target Start/End: Original strand, 42418161 - 42418241
Alignment:
Q  428 tgaccctttttaaagagcaattaaatctgaagcgttgattttgatccaatggttcaaattaattcctctcatcctctcatt 508  Q
    |||||||||| ||||| ||||||||||||| ||||||||||||||| || |||  |||||||||||||||| |||||||||    
T  42418161 tgacccttttgaaagaacaattaaatctgaggcgttgattttgatctaacggtctaaattaattcctctcaccctctcatt 42418241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 490 - 535
Target Start/End: Complemental strand, 7831678 - 7831633
Alignment:
Q  490 ttcctctcatcctctcattataactactcctctcacttgatatgcc 535  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  7831678 ttcctctcatcctctcattataactactcctctcacttgatatgcc 7831633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 462 - 536
Target Start/End: Original strand, 41115465 - 41115538
Alignment:
Q  462 ttgattttgatccaatggttcaaattaattcctctcatcctctcattataactactcctctcacttgatatgccc 536  Q
    |||||||||||| ||||||| |  || |||||||||||| ||||||| |||| ||||||||||||||||||||||    
T  41115465 ttgattttgatctaatggttgaggtttattcctctcatc-tctcattttaacaactcctctcacttgatatgccc 41115538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 506
Target Start/End: Complemental strand, 32576692 - 32576627
Alignment:
Q  440 aagagcaattaaatctgaagcgttgattttgatccaatggttcaaattaattcctctcatcctctca 506  Q
    |||||||||||||| ||||||||||||||| || ||||||  || |||||||| |||||||||||||    
T  32576692 aagagcaattaaatttgaagcgttgattttaattcaatgg-ccagattaattcttctcatcctctca 32576627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 533
Target Start/End: Complemental strand, 18977914 - 18977844
Alignment:
Q  462 ttgattttgatccaatggttcaaattaattcctctcatcctctcattataactactcctctcacttgatatg 533  Q
    |||||||||||| ||||||| |  || ||||||||||| |||||||| |||| |||||||| ||||||||||    
T  18977914 ttgattttgatctaatggttgaggtttattcctctcat-ctctcattttaacaactcctctaacttgatatg 18977844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 489 - 531
Target Start/End: Original strand, 32949844 - 32949885
Alignment:
Q  489 attcctctcatcctctcattataactactcctctcacttgata 531  Q
    ||||||||||||||||||||||||| |||||||||| ||||||    
T  32949844 attcctctcatcctctcattataac-actcctctcatttgata 32949885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 536
Target Start/End: Original strand, 44545238 - 44545311
Alignment:
Q  462 ttgattttgatccaatggttcaaattaattcctctcatcctctcattataactactcctctcacttgatatgccc 536  Q
    |||||||||||| ||||||| |  || |||||| ||||| ||||||| |||| |||| |||||||||||||||||    
T  44545238 ttgattttgatctaatggttgaggtttattcctatcatc-tctcattttaacaactcatctcacttgatatgccc 44545311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 534
Target Start/End: Original strand, 7832382 - 7832426
Alignment:
Q  489 attcctctcatcctctcattataactactcctctcacttgatatgc 534  Q
    |||||||||||| |||||||||||||| |||||||| |||||||||    
T  7832382 attcctctcatcatctcattataacta-tcctctcatttgatatgc 7832426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 524
Target Start/End: Complemental strand, 13784086 - 13784053
Alignment:
Q  491 tcctctcatcctctcattataactactcctctca 524  Q
    |||||||||||||||||| |||||||||||||||    
T  13784086 tcctctcatcctctcattttaactactcctctca 13784053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 491 - 531
Target Start/End: Original strand, 9146983 - 9147022
Alignment:
Q  491 tcctctcatcctctcattataactactcctctcacttgata 531  Q
    ||||||||||||||||||||||| |||||||||| ||||||    
T  9146983 tcctctcatcctctcattataac-actcctctcatttgata 9147022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 91; Significance: 9e-44; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 407 - 533
Target Start/End: Original strand, 23650 - 23776
Alignment:
Q  407 aaaggtggaggttgtagtgcatgaccctttttaaagagcaattaaatctgaagcgttgattttgatccaatggttcaaattaattcctctcatcctctca 506  Q
    |||||| ||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||| |  | ||||||||||||||||||||||    
T  23650 aaaggtagaggttgtagtgcatgatcctttttaaagaataattaaatctgaagcgttgattttgatccaatgatctatattaattcctctcatcctctca 23749  T
Q  507 ttataactactcctctcacttgatatg 533  Q
    ||||||||||| |||||||||||||||    
T  23750 ttataactactactctcacttgatatg 23776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 1e-39; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 415 - 534
Target Start/End: Complemental strand, 42848052 - 42847933
Alignment:
Q  415 aggttgtagtgcatgaccctttttaaagagcaattaaatctgaagcgttgattttgatccaatggttcaaattaattcctctcatcctctcattataact 514  Q
    |||||| ||| ||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||| |||| |||||||||||| |||||||||||||||    
T  42848052 aggttgaagtacatgatcctttttaaagtgcaattaaatctgaagcgttgatttagatccaatggtccaaactaattcctctcaccctctcattataact 42847953  T
Q  515 actcctctcacttgatatgc 534  Q
    | ||||||||||||||||||    
T  42847952 attcctctcacttgatatgc 42847933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 426 - 534
Target Start/End: Original strand, 45632361 - 45632468
Alignment:
Q  426 catgaccctttttaaagagcaattaaatctgaagcgttgattttgatccaatggttcaaattaattcctctcatcctctcattataactactcctctcac 525  Q
    ||||||||||||||||| |||||||||||| |||||||||||| ||||||| |||| ||||||||||||||||| |||||||| ||||||||||||||||    
T  45632361 catgaccctttttaaagtgcaattaaatctaaagcgttgatttagatccaacggtttaaattaattcctctcat-ctctcattgtaactactcctctcac 45632459  T
Q  526 ttgatatgc 534  Q
    |||||||||    
T  45632460 ttgatatgc 45632468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 407 - 499
Target Start/End: Original strand, 1678296 - 1678388
Alignment:
Q  407 aaaggtggaggttgtagtgcatgaccctttttaaagagcaattaaatctgaagcgttgattttgatccaatggttcaaattaattcctctcat 499  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||| |||||||||||||||    
T  1678296 aaaggtagaggttgtagtgcatgaccctttttaaagagcaattaaatttaaagcgttgattttgatcaaatggttcagattaattcctctcat 1678388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 426 - 535
Target Start/End: Original strand, 42848595 - 42848704
Alignment:
Q  426 catgaccctttttaaagagcaattaaatctgaagcgttgattttgatccaatggttcaaattaattcctctcatcctctcattataactactcctctcac 525  Q
    |||||| |||||||||| ||||||||||||||||||||||||| ||| ||| ||| ||||||||||| ||||| |||||| |||||||||||||||| |     
T  42848595 catgacactttttaaagtgcaattaaatctgaagcgttgatttagattcaacggtccaaattaattcttctcaccctctccttataactactcctctaat 42848694  T
Q  526 ttgatatgcc 535  Q
    ||||||||||    
T  42848695 ttgatatgcc 42848704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 443 - 536
Target Start/End: Complemental strand, 1677662 - 1677569
Alignment:
Q  443 agcaattaaatctgaagcgttgattttgatccaatggttcaaattaattcctctcatcctctcattataactactcctctcacttgatatgccc 536  Q
    ||||||||||||||||||||||||||| || |||| ||||| |||||||  | ||||||||||||| |||||||||||||||||||||||||||    
T  1677662 agcaattaaatctgaagcgttgattttaattcaatagttcagattaatttttttcatcctctcattttaactactcctctcacttgatatgccc 1677569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 407 - 508
Target Start/End: Complemental strand, 30266450 - 30266349
Alignment:
Q  407 aaaggtggaggttgtagtgcatgaccctttttaaagagcaattaaatctgaagcgttgattttgatccaatggttcaaattaattcctctcatcctctca 506  Q
    ||||||||| |||  ||| |||||||||||||||||||||||||||||||||| |||||||| ||||||| |||  |||||||||||||||| |||||||    
T  30266450 aaaggtggatgttacagtccatgaccctttttaaagagcaattaaatctgaagtgttgatttagatccaacggtctaaattaattcctctcaccctctca 30266351  T
Q  507 tt 508  Q
    ||    
T  30266350 tt 30266349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 556 - 614
Target Start/End: Original strand, 74379 - 74437
Alignment:
Q  556 agggatccattgactctaagagtaactctattgatttactccaaatcttatcccttaat 614  Q
    |||||| |||||||||||| |||||||||||||| |||||| ||| |||||||||||||    
T  74379 agggattcattgactctaaaagtaactctattgacttactctaaaccttatcccttaat 74437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 462 - 536
Target Start/End: Complemental strand, 44356887 - 44356814
Alignment:
Q  462 ttgattttgatccaatggttcaaattaattcctctcatcctctcattataactactcctctcacttgatatgccc 536  Q
    |||||||||||| ||||||| |  || |||||||||||| ||||||| |||| ||||||||||||||||||||||    
T  44356887 ttgattttgatctaatggttgaggtttattcctctcatc-tctcattttaacaactcctctcacttgatatgccc 44356814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 431 - 508
Target Start/End: Complemental strand, 25616955 - 25616878
Alignment:
Q  431 ccctttttaaagagcaattaaatctgaagcgttgattttgatccaatggttcaaattaattcctctcatcctctcatt 508  Q
    ||||||||| |||||||||||||||||||| |||||||  |||||| |||  || |||||| |||||| |||||||||    
T  25616955 ccctttttacagagcaattaaatctgaagccttgatttaaatccaacggtctaagttaatttctctcaccctctcatt 25616878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 533
Target Start/End: Original strand, 44357569 - 44357639
Alignment:
Q  462 ttgattttgatccaatggttcaaattaattcctctcatcctctcattataactactcctctcacttgatatg 533  Q
    |||||||||||| ||||||| |  || |||||||||||| ||||||| |||| | |||||||||||||||||    
T  44357569 ttgattttgatctaatggttgaggtttattcctctcatc-tctcattttaacaattcctctcacttgatatg 44357639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 428 - 522
Target Start/End: Complemental strand, 28682522 - 28682429
Alignment:
Q  428 tgaccctttttaaagagcaattaaatctgaagcgttgattttgatccaatggttcaaattaattcctctcatcctctcattataactactcctct 522  Q
    ||||| |||||||||||||||| | || || || ||||||| |||||||  |   |||||||||| |||||| || |||||||||||||||||||    
T  28682522 tgaccatttttaaagagcaatttattccgaggcattgatttagatccaacagactaaattaattcatctcat-ctttcattataactactcctct 28682429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 58 - 126
Target Start/End: Complemental strand, 38798869 - 38798802
Alignment:
Q  58 tctttttcttccacaattgctaaagtccttagaaacatccctttgattttctaggtttccctttcgtta 126  Q
    |||||||||| || ||||| | || |||||||||| |  ||||||||||||||||||||| ||||||||    
T  38798869 tctttttctttcataattgttcaa-tccttagaaaaacacctttgattttctaggtttccatttcgtta 38798802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 1e-21; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 423 - 508
Target Start/End: Original strand, 23732875 - 23732960
Alignment:
Q  423 gtgcatgaccctttttaaagagcaattaaatctgaagcgttgattttgatccaatggttcaaattaattcctctcatcctctcatt 508  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||| |||| || |||  |||||||||||||||| |||||||||    
T  23732875 gtgcatgaccctttttaaagaacaattaaatctgaagtgttgatttagatctaacggtctaaattaattcctctcaccctctcatt 23732960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 428 - 533
Target Start/End: Complemental strand, 51097621 - 51097517
Alignment:
Q  428 tgaccctttttaaagagcaattaaatctgaagcgttgattttgatccaatggttcaaattaattcctctcatcctctcattataactactcctctcactt 527  Q
    |||||| |||||||||||| || ||||| |  | |||||||  |||||| |||  |||||||||||||||||| ||||||||||||||||||||||||||    
T  51097621 tgacccattttaaagagcattttaatctcagcctttgatttaaatccaacggtcgaaattaattcctctcatc-tctcattataactactcctctcactt 51097523  T
Q  528 gatatg 533  Q
    ||||||    
T  51097522 gatatg 51097517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 428 - 536
Target Start/End: Original strand, 19534719 - 19534826
Alignment:
Q  428 tgaccctttttaaagagcaattaaatctgaagcgttgattttgatccaatggttcaaattaattcctctcatcctctcattataactactcctctcactt 527  Q
    ||||||||||||||||||| || ||| |||  ||||||||| |||||||  ||  |||||||| |||||||| ||||||||||| | |||||||| ||||    
T  19534719 tgaccctttttaaagagcattttaatttgagccgttgatttagatccaacagtctaaattaatccctctcat-ctctcattatatccactcctcttactt 19534817  T
Q  528 gatatgccc 536  Q
    |||||||||    
T  19534818 gatatgccc 19534826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 490 - 536
Target Start/End: Original strand, 36930179 - 36930225
Alignment:
Q  490 ttcctctcatcctctcattataactactcctctcacttgatatgccc 536  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  36930179 ttcctctcatcctctcattataactacttctctcacttgatatgccc 36930225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 407 - 478
Target Start/End: Original strand, 28763097 - 28763168
Alignment:
Q  407 aaaggtggaggttgtagtgcatgaccctttttaaagagcaattaaatctgaagcgttgattttgatccaatg 478  Q
    ||||||| ||| ||||||   |||||||||||||||| ||||| ||||||| ||||||||||||||||||||    
T  28763097 aaaggtgtaggatgtagtatgtgaccctttttaaagaacaatttaatctgaggcgttgattttgatccaatg 28763168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 490 - 527
Target Start/End: Complemental strand, 43250920 - 43250883
Alignment:
Q  490 ttcctctcatcctctcattataactactcctctcactt 527  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  43250920 ttcctctcatcctctcattataattactcctctcactt 43250883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 430 - 468
Target Start/End: Complemental strand, 12644211 - 12644173
Alignment:
Q  430 accctttttaaagagcaattaaatctgaagcgttgattt 468  Q
    ||||||||||||||| |||||||| ||||||||||||||    
T  12644211 accctttttaaagagtaattaaatttgaagcgttgattt 12644173  T

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Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 491 - 531
Target Start/End: Original strand, 3929194 - 3929233
Alignment:
Q  491 tcctctcatcctctcattataactactcctctcacttgata 531  Q
    ||||||||||||||||||||||| |||||||||| ||||||    
T  3929194 tcctctcatcctctcattataac-actcctctcatttgata 3929233  T

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Target: scaffold0021 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 555 - 622
Target Start/End: Complemental strand, 120623 - 120556
Alignment:
Q  555 gagggatccattgactctaagagtaactctattgatttactccaaatcttatcccttaatattgctgc 622  Q
    |||||| |||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  120623 gagggacccattgactctatgagtaactctattgacttactccaaatcttatcccctaatattgctgc 120556  T

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Target: chr6 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 430 - 508
Target Start/End: Original strand, 18970597 - 18970675
Alignment:
Q  430 accctttttaaagagcaattaaatctgaagcgttgattttgatccaatggttcaaattaattcctctcatcctctcatt 508  Q
    ||||||||||||||| | |||||| |||||||| ||||| ||||||| | |  ||||||||||||||||||||||||||    
T  18970597 accctttttaaagagtagttaaatttgaagcgtcgatttagatccaacgatcaaaattaattcctctcatcctctcatt 18970675  T

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Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 462 - 536
Target Start/End: Complemental strand, 22046500 - 22046427
Alignment:
Q  462 ttgattttgatccaatggttcaaattaattcctctcatcctctcattataactactcctctcacttgatatgccc 536  Q
    |||||||||||| ||||||| |  || |||||||||||| ||||||| |||| ||||||||||||||||||||||    
T  22046500 ttgattttgatctaatggttgaggtttattcctctcatc-tctcattttaacaactcctctcacttgatatgccc 22046427  T

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Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 462 - 536
Target Start/End: Complemental strand, 22058908 - 22058835
Alignment:
Q  462 ttgattttgatccaatggttcaaattaattcctctcatcctctcattataactactcctctcacttgatatgccc 536  Q
    |||||||||||| ||||||| |  || |||||||||||| ||||||| |||| ||||||||||||||||||||||    
T  22058908 ttgattttgatctaatggttgaggtttattcctctcatc-tctcattttaacaactcctctcacttgatatgccc 22058835  T

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Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 471 - 512
Target Start/End: Complemental strand, 18242735 - 18242694
Alignment:
Q  471 atccaatggttcaaattaattcctctcatcctctcattataa 512  Q
    ||||||||||| | ||||||||||||||||||||||||||||    
T  18242735 atccaatggttaatattaattcctctcatcctctcattataa 18242694  T

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Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 533
Target Start/End: Original strand, 22047182 - 22047252
Alignment:
Q  462 ttgattttgatccaatggttcaaattaattcctctcatcctctcattataactactcctctcacttgatatg 533  Q
    |||||||||||| ||||||| |  || |||||||||||| ||||||| |||| | |||||||||||||||||    
T  22047182 ttgattttgatctaatggttgaggtttattcctctcatc-tctcattttaacaattcctctcacttgatatg 22047252  T

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Target: scaffold0154 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 470 - 521
Target Start/End: Complemental strand, 7520 - 7469
Alignment:
Q  470 gatccaatggttcaaattaattcctctcatcctctcattataactactcctc 521  Q
    ||||||| ||| |||||||||||||| || ||| ||||||||||||||||||    
T  7520 gatccaacggtccaaattaattcctcacaccctttcattataactactcctc 7469  T

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