View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5691-Insertion-3 (Length: 802)

Name: NF5691-Insertion-3
Description: NF5691
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5691-Insertion-3
NF5691-Insertion-3
[»] chr3 (25 HSPs)
chr3 (444-802)||(36828701-36829059)
chr3 (10-452)||(36827221-36827661)
chr3 (59-208)||(36279112-36279260)
chr3 (134-292)||(3671134-3671285)
chr3 (59-197)||(52318132-52318269)
chr3 (75-208)||(55389291-55389432)
chr3 (112-299)||(20464158-20464345)
chr3 (72-208)||(48808532-48808669)
chr3 (119-208)||(55388219-55388308)
chr3 (20-208)||(53958872-53959063)
chr3 (121-257)||(3693996-3694132)
chr3 (20-208)||(48573145-48573341)
chr3 (20-208)||(17700679-17700872)
chr3 (118-208)||(53957833-53957923)
chr3 (115-208)||(47117942-47118034)
chr3 (120-208)||(19114673-19114760)
chr3 (59-131)||(40206162-40206234)
chr3 (127-198)||(33837333-33837404)
chr3 (119-202)||(48809529-48809612)
chr3 (251-299)||(47118037-47118085)
chr3 (72-130)||(2591872-2591930)
chr3 (134-208)||(33427891-33427965)
chr3 (118-208)||(36280190-36280280)
chr3 (118-175)||(2323217-2323274)
chr3 (225-330)||(50753875-50753980)
[»] chr2 (47 HSPs)
chr2 (140-288)||(14887373-14887521)
chr2 (121-271)||(21733627-21733777)
chr2 (59-208)||(14704165-14704313)
chr2 (144-304)||(26585162-26585319)
chr2 (165-330)||(12746101-12746266)
chr2 (225-330)||(15441931-15442036)
chr2 (136-299)||(34037544-34037707)
chr2 (119-200)||(43380755-43380836)
chr2 (59-208)||(24458220-24458376)
chr2 (118-202)||(28864664-28864748)
chr2 (76-208)||(39016214-39016346)
chr2 (143-305)||(37607185-37607347)
chr2 (59-204)||(32765101-32765253)
chr2 (127-333)||(12003622-12003828)
chr2 (145-291)||(18675181-18675326)
chr2 (118-208)||(31443098-31443188)
chr2 (145-329)||(34582550-34582734)
chr2 (75-208)||(39015165-39015306)
chr2 (59-204)||(40000142-40000294)
chr2 (121-208)||(21732275-21732362)
chr2 (59-130)||(31442617-31442688)
chr2 (118-292)||(7412188-7412362)
chr2 (186-328)||(38854601-38854743)
chr2 (119-208)||(43381045-43381134)
chr2 (118-204)||(24459327-24459413)
chr2 (181-327)||(31814260-31814406)
chr2 (118-211)||(2910257-2910350)
chr2 (127-208)||(17330101-17330182)
chr2 (255-328)||(26586285-26586358)
chr2 (127-203)||(12010224-12010300)
chr2 (119-271)||(17466683-17466834)
chr2 (118-210)||(31090315-31090407)
chr2 (118-208)||(7073810-7073901)
chr2 (225-328)||(38856327-38856430)
chr2 (145-195)||(12011371-12011421)
chr2 (184-330)||(38853813-38853959)
chr2 (75-197)||(2911309-2911439)
chr2 (110-251)||(12004842-12004983)
chr2 (72-121)||(33162020-33162069)
chr2 (75-208)||(31091349-31091490)
chr2 (122-202)||(31442517-31442597)
chr2 (149-345)||(38854832-38855028)
chr2 (118-271)||(39256872-39257027)
chr2 (70-125)||(12004774-12004829)
chr2 (59-98)||(12010357-12010396)
chr2 (127-174)||(33163320-33163367)
chr2 (395-433)||(16463590-16463628)
[»] chr8 (34 HSPs)
chr8 (165-329)||(31074053-31074217)
chr8 (59-204)||(1952785-1952929)
chr8 (72-292)||(5737832-5738050)
chr8 (145-330)||(28524816-28525001)
chr8 (140-327)||(28006471-28006657)
chr8 (140-327)||(28063774-28063960)
chr8 (140-333)||(9625245-9625438)
chr8 (116-301)||(5736929-5737114)
chr8 (118-208)||(32898318-32898408)
chr8 (140-347)||(24198975-24199179)
chr8 (139-272)||(33314974-33315107)
chr8 (20-208)||(35177554-35177747)
chr8 (119-215)||(41122616-41122712)
chr8 (111-291)||(45476409-45476589)
chr8 (111-246)||(39138510-39138645)
chr8 (59-330)||(5965229-5965507)
chr8 (118-204)||(35178678-35178764)
chr8 (118-299)||(30134655-30134836)
chr8 (141-229)||(41754127-41754215)
chr8 (146-201)||(28526425-28526480)
chr8 (145-292)||(31075171-31075317)
chr8 (147-328)||(28619049-28619230)
chr8 (118-208)||(28619405-28619495)
chr8 (127-199)||(41121294-41121366)
chr8 (75-208)||(10406366-10406492)
chr8 (20-130)||(10407353-10407461)
chr8 (118-208)||(32564362-32564452)
chr8 (146-208)||(41754687-41754749)
chr8 (151-252)||(12637647-12637748)
chr8 (133-208)||(2561346-2561421)
chr8 (144-251)||(9626340-9626447)
chr8 (59-121)||(41122572-41122633)
chr8 (127-208)||(8569568-8569649)
chr8 (141-170)||(41754258-41754287)
[»] chr5 (33 HSPs)
chr5 (72-291)||(9537119-9537338)
chr5 (59-207)||(4593021-4593170)
chr5 (75-208)||(4593931-4594064)
chr5 (118-245)||(34173403-34173530)
chr5 (20-208)||(40611420-40611613)
chr5 (118-208)||(2464829-2464919)
chr5 (118-271)||(32555400-32555552)
chr5 (75-208)||(25590590-25590731)
chr5 (118-208)||(14891020-14891110)
chr5 (59-208)||(545851-545999)
chr5 (127-244)||(19271660-19271777)
chr5 (179-328)||(30970499-30970648)
chr5 (175-328)||(35538211-35538364)
chr5 (75-208)||(8075656-8075796)
chr5 (119-271)||(21069406-21069557)
chr5 (159-330)||(9537943-9538114)
chr5 (118-208)||(32640448-32640538)
chr5 (104-208)||(8074610-8074714)
chr5 (128-204)||(16979176-16979252)
chr5 (59-131)||(30970288-30970360)
chr5 (118-208)||(28590985-28591076)
chr5 (118-208)||(544808-544898)
chr5 (68-202)||(2466588-2466730)
chr5 (145-202)||(31946933-31946990)
chr5 (118-202)||(578625-578709)
chr5 (59-204)||(14889933-14890085)
chr5 (104-208)||(40612518-40612622)
chr5 (145-208)||(13651041-13651104)
chr5 (118-178)||(578030-578090)
chr5 (243-299)||(25590519-25590575)
chr5 (116-204)||(28589863-28589951)
chr5 (59-130)||(9537862-9537932)
chr5 (141-202)||(19183127-19183188)
[»] chr1 (32 HSPs)
chr1 (145-328)||(8975219-8975402)
chr1 (75-290)||(34088279-34088494)
chr1 (72-208)||(32665596-32665733)
chr1 (93-208)||(9339806-9339921)
chr1 (145-304)||(29766007-29766166)
chr1 (59-291)||(6612516-6612746)
chr1 (119-271)||(3117766-3117918)
chr1 (140-330)||(50107078-50107268)
chr1 (59-208)||(52439621-52439777)
chr1 (75-208)||(9340862-9340988)
chr1 (59-271)||(51450117-51450336)
chr1 (103-197)||(7944326-7944420)
chr1 (118-271)||(6613840-6613984)
chr1 (70-198)||(26518279-26518412)
chr1 (120-204)||(34085706-34085790)
chr1 (141-208)||(534424-534491)
chr1 (117-204)||(16249827-16249914)
chr1 (119-208)||(11830069-11830158)
chr1 (120-200)||(25038069-25038149)
chr1 (120-200)||(25043281-25043361)
chr1 (204-292)||(33342512-33342600)
chr1 (144-325)||(1407703-1407872)
chr1 (127-201)||(22856865-22856939)
chr1 (59-208)||(52440367-52440523)
chr1 (145-299)||(11060665-11060818)
chr1 (182-292)||(22857496-22857606)
chr1 (118-340)||(39726540-39726761)
chr1 (145-347)||(44719391-44719593)
chr1 (266-326)||(26519103-26519163)
chr1 (118-173)||(51453592-51453647)
chr1 (118-204)||(32664667-32664752)
chr1 (134-208)||(39977512-39977586)
[»] chr4 (23 HSPs)
chr4 (59-301)||(20599701-20599942)
chr4 (59-208)||(42278209-42278356)
chr4 (59-208)||(47874723-47874872)
chr4 (117-291)||(26170737-26170914)
chr4 (145-330)||(21621881-21622066)
chr4 (143-330)||(21622995-21623182)
chr4 (145-331)||(24745955-24746141)
chr4 (180-330)||(32244603-32244753)
chr4 (118-290)||(4701863-4702033)
chr4 (75-196)||(54574597-54574726)
chr4 (119-292)||(19050334-19050505)
chr4 (226-327)||(24753522-24753623)
chr4 (119-204)||(47878358-47878443)
chr4 (146-271)||(2786340-2786465)
chr4 (143-271)||(32244391-32244519)
chr4 (59-202)||(4703006-4703154)
chr4 (229-292)||(39869016-39869079)
chr4 (139-261)||(6039248-6039370)
chr4 (705-755)||(20825029-20825079)
chr4 (118-208)||(42391759-42391849)
chr4 (118-202)||(38216632-38216714)
chr4 (119-208)||(53770473-53770562)
chr4 (119-196)||(53770944-53771021)
[»] chr7 (43 HSPs)
chr7 (59-292)||(12223494-12223726)
chr7 (72-208)||(34707780-34707916)
chr7 (72-291)||(6680340-6680559)
chr7 (73-208)||(44334278-44334413)
chr7 (74-208)||(39708289-39708423)
chr7 (75-208)||(34710213-34710346)
chr7 (59-202)||(35728901-35729043)
chr7 (59-197)||(30924824-30924961)
chr7 (72-208)||(7259512-7259647)
chr7 (179-330)||(25621635-25621786)
chr7 (118-208)||(7258435-7258525)
chr7 (145-347)||(24288746-24288948)
chr7 (20-170)||(45583792-45583940)
chr7 (127-292)||(32793267-32793432)
chr7 (59-201)||(5929924-5930065)
chr7 (118-208)||(44333297-44333387)
chr7 (119-208)||(48788546-48788635)
chr7 (132-208)||(8048651-8048727)
chr7 (20-208)||(10898843-10899036)
chr7 (75-208)||(42477540-42477681)
chr7 (134-292)||(19433804-19433961)
chr7 (127-241)||(39824276-39824387)
chr7 (118-208)||(48777417-48777507)
chr7 (111-208)||(2677096-2677193)
chr7 (168-333)||(22621182-22621347)
chr7 (59-151)||(8047052-8047143)
chr7 (75-208)||(35727858-35727999)
chr7 (240-300)||(44529116-44529176)
chr7 (118-202)||(45584370-45584453)
chr7 (165-307)||(8870058-8870202)
chr7 (225-293)||(8870989-8871057)
chr7 (254-330)||(8879532-8879608)
chr7 (231-271)||(12220139-12220179)
chr7 (120-200)||(24934965-24935045)
chr7 (179-307)||(27067863-27067991)
chr7 (179-307)||(27210322-27210450)
chr7 (104-208)||(48647302-48647406)
chr7 (118-201)||(385006-385088)
chr7 (120-202)||(7509327-7509410)
chr7 (240-307)||(33060891-33060958)
chr7 (118-208)||(43457628-43457717)
chr7 (118-200)||(43461590-43461672)
chr7 (120-197)||(42478145-42478222)
[»] scaffold0039 (1 HSPs)
scaffold0039 (118-271)||(79190-79343)
[»] scaffold0237 (2 HSPs)
scaffold0237 (146-292)||(3042-3189)
scaffold0237 (146-299)||(1774-1927)
[»] chr6 (10 HSPs)
chr6 (146-292)||(29856840-29856987)
chr6 (146-299)||(29845569-29845722)
chr6 (141-229)||(30748149-30748237)
chr6 (118-245)||(19600098-19600224)
chr6 (191-328)||(24621288-24621425)
chr6 (231-347)||(10855848-10855963)
chr6 (49-271)||(31239765-31239993)
chr6 (379-433)||(11656120-11656176)
chr6 (59-115)||(19600025-19600082)
chr6 (251-292)||(31219051-31219092)
[»] scaffold0767 (2 HSPs)
scaffold0767 (59-301)||(5686-5918)
scaffold0767 (72-197)||(6052-6185)
[»] scaffold0016 (1 HSPs)
scaffold0016 (111-193)||(36391-36473)


Alignment Details
Target: chr3 (Bit Score: 355; Significance: 0; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 444 - 802
Target Start/End: Original strand, 36828701 - 36829059
Alignment:
Q  444 tattgaaaatgtggatgtaatgatatatatgtttagacgaaaatatcctcactgaaatttgaatatcccaatcctgtccttcaccctactaccctgcatt 543  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36828701 tattgaaaatgtggatgtaatgatatatatgtttagacgaaaatatcctcactgaaatttgaatatcccaatcctgtccttcaccctactaccctgcatt 36828800  T
Q  544 ctctcattcggtgcaccttttcacaagctgcattcacgaatcccttgcagtgtcgccattgaaatcgaaagtaacaatgtggaggtcgatactctcaaga 643  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36828801 ctctcattcggtgcaccttttcacaagctgcattcacgaatcccttgcagtgtcgccattgaaatcgaaagtaacaatgtggaggtcgatactctcaaga 36828900  T
Q  644 caaagatgtgttcctcttcgcaacttcaacgccgcctctgcttcaccactgattcaggttcttcctctctctaatttcatactaaaccctacactatcaa 743  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36828901 caaagatgtgttcctcttcgcaacttcaacgccgcctctgcttcaccactgattcaggttcttcctctctctaatttcatactaaaccctacactatcaa 36829000  T
Q  744 ctacacctttttcttccttaggttttcctcaaatttcacttctttccaataaccctaga 802  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  36829001 ctacaccttcttcttccttaggttttcctcaaatttcacttctttccaataaccctaga 36829059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 10 - 452
Target Start/End: Original strand, 36827221 - 36827661
Alignment:
Q  10 aaacatataataagtatgtatagtgagggacctagcaacaagttgttgttttaatgaaagatttgattttgaacaaaagaggaaattagttgacatttaa 109  Q
    ||||||||| |||||||||| ||| |||||| || |||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||    
T  36827221 aaacatatactaagtatgtacagtcagggacataacaacaagttgttgttt-aatgaaagatttgattttgaacaaaagagagaattagttgacatttaa 36827319  T
Q  110 gaatttgagatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgat 209  Q
    | |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  36827320 ggatttgagatttaggaatttgaaattcaatttggggatattgattttcgattcagggaccaaaataatcattttctattttcactttagtccctgtgat 36827419  T
Q  210 acttcacacttcttctcagcataaaacatttgtcacaccatcacttaacaaaattatttaacaccagggattaaagtgataacaaaagtgtacattcaaa 309  Q
    ||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| || ||||||||||||  ||||||||||||| |    
T  36827420 acttcacgctccttctcagcataaaacatttgtcacatcatcacttaacaaaattatttaacatcagagactaaagtgataacggaagtgtacattcaga 36827519  T
Q  310 tattactttatatttaatcctaagccaaagatctttgtcgaagcgaaagcgaatgaatgaataaaaattatactccatccgtctcaataatcgtctcttt 409  Q
     |||| ||||||||||||||| || ||| ||||||||||  ||||| ||| ||||||| || |||||||||||| |||||||||||||||| ||||||||    
T  36827520 gattattttatatttaatcctgagtcaaggatctttgtcacagcgagagcaaatgaat-aaaaaaaattatacttcatccgtctcaataattgtctcttt 36827618  T
Q  410 tcccatttttatttttctcaaaatgtggatgtaatattgaaaa 452  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  36827619 tcccatttttatttttctcaaaatgtggatgtaatattgaaaa 36827661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 59 - 208
Target Start/End: Complemental strand, 36279260 - 36279112
Alignment:
Q  59 tttaatgaaagatttgattttgaacaaaagaggaaattagttgacatttaagaatttgagatttaggaatttgaaattcaatttgaggatattgattttc 158  Q
    ||||||| |||||| |||||||||||||| ||  |||||| |||| |||||| |||| ||||||||| |||||| |||||||||| |||||||  ||||     
T  36279260 tttaatggaagatt-gattttgaacaaaaaagataattagatgacttttaaggatttaagatttagggatttgatattcaatttggggatattttttttt 36279162  T
Q  159 gattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    | ||| ||||||||| ||| ||||||||| ||||||||| ||||||||||    
T  36279161 ggttcagggaccaaagtgaccattttctactttcactttggtccctgtga 36279112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 134 - 292
Target Start/End: Complemental strand, 3671285 - 3671134
Alignment:
Q  134 attcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataa 233  Q
    |||||||||| ||||||||||||||| ||| |||||||||       ||||||| ||||||||||||||| |||| |  ||| ||  ||| |||||||||    
T  3671285 attcaatttggggatattgattttcggttcagggaccaaa-------ttttctactttcactttagtccccgtgacatgtcataccccttgtcagcataa 3671193  T
Q  234 aacatttgtcacaccatcacttaacaaaattatttaacaccagggattaaagtgataac 292  Q
    ||||| ||||||| |||||||||||| |||| ||||||  |||||||||||||||||||    
T  3671192 aacatgtgtcacatcatcacttaacataattttttaacggcagggattaaagtgataac 3671134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 59 - 197
Target Start/End: Original strand, 52318132 - 52318269
Alignment:
Q  59 tttaatgaaagatttgattttgaacaaaagaggaaattagttgacatttaagaatttgagatttaggaatttgaaattcaatttgaggatattgattttc 158  Q
    ||||||| |||||| |||||||||||||| ||  |||||| ||||||||||| |||| ||||||||| |||||| |||||||||| |||||||| ||||     
T  52318132 tttaatggaagatt-gattttgaacaaaaaagataattagatgacatttaaggatttaagatttagggatttgatattcaatttggggatattgtttttt 52318230  T
Q  159 gattcggggaccaaaatgatcattttctattttcacttt 197  Q
    | |||  |||||||| ||| ||||||||| |||||||||    
T  52318231 ggttcatggaccaaagtgaccattttctactttcacttt 52318269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 55389291 - 55389432
Alignment:
Q  75 attttgaacaaaagaggaaattagttgacatttaagaatttgagatt--------taggaatttgaaattcaatttgaggatattgattttcgattcggg 166  Q
    ||||||||||||||||  |||||| ||||||||| | ||||||||||        ||||||||||| |||||||||| | ||||||||||||| ||| ||    
T  55389291 attttgaacaaaagagagaattagatgacatttagggatttgagatttaaggatttaggaatttgatattcaatttgggaatattgattttcggttcagg 55389390  T
Q  167 gaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    ||||||| ||| ||||||||| ||||||||| ||||||||||    
T  55389391 gaccaaagtgaccattttctactttcactttggtccctgtga 55389432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 112 - 299
Target Start/End: Complemental strand, 20464345 - 20464158
Alignment:
Q  112 atttgagatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatac 211  Q
    |||||||||||||| ||||||  ||||| ||| ||||||||||||| |||||  |||||||| ||| ||||||||| ||||| ||||||| |||||||||    
T  20464345 atttgagatttagggatttgaggttcaaattggggatattgatttttgattcatggaccaaagtgaccattttctactttcattttagtctctgtgatac 20464246  T
Q  212 ttcacacttcttctcagcataaaacatttgtcacaccatcacttaacaaaattatttaacaccagggattaaagtgataacaaaagtg 299  Q
     ||  |  || | | | | |||||||| ||||||| |||||||||||| | |||||||||  |  ||| ||||||||||||| |||||    
T  20464245 ctcgtatgtcatgttatcgtaaaacatgtgtcacatcatcacttaacagagttatttaacgtcgtggactaaagtgataacagaagtg 20464158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 72 - 208
Target Start/End: Complemental strand, 48808669 - 48808532
Alignment:
Q  72 ttgattttgaacaaaagagga-aattagttgacatttaagaatttgagatttaggaatttgaaattcaatttgaggatattgattttcgattcggggacc 170  Q
    |||||||||| ||||| | || |||||| | | ||||||| |||| ||||||||| |||||| |||||||||| | ||||||||||| | ||| ||||||    
T  48808669 ttgattttgagcaaaaaaagataattagataatatttaaggatttaagatttagggatttgatattcaatttgggaatattgatttttggttcagggacc 48808570  T
Q  171 aaaatgatcattttctattttcactttagtccctgtga 208  Q
    ||| ||| ||||||||| ||||||||| ||| ||||||    
T  48808569 aaagtgaccattttctactttcactttggtctctgtga 48808532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 119 - 208
Target Start/End: Complemental strand, 55388308 - 55388219
Alignment:
Q  119 atttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    ||||||| |||||| |||||||||| ||||||||||||| | ||| ||||||||| ||| ||||||||| ||||||||| ||||||||||    
T  55388308 atttagggatttgatattcaatttggggatattgatttttggttcagggaccaaagtgaccattttctactttcactttggtccctgtga 55388219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 20 - 208
Target Start/End: Original strand, 53958872 - 53959063
Alignment:
Q  20 taagtatgtatagtgagggacctagcaacaagttgttgttttaatgaaagatttgattttgaacaaaagaggaaattagttgacatttaaga------at 113  Q
    |||||||| | ||| ||||||||  |||||||||||   ||||||| ||||||  | ||||||||||||||  |||||| ||||||||||||      ||    
T  53958872 taagtatgcacagtcagggaccttacaacaagttgtg--tttaatggaagatt--aatttgaacaaaagagagaattagatgacatttaagatttgagat 53958967  T
Q  114 ttgag-atttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    || || |||||||||||||| |||||||||| | ||||||||||| | ||| ||| ||||| |||  |||||||| ||||||||| ||||||||||    
T  53958968 ttaaggatttaggaatttgatattcaatttgggaatattgatttttggttcaggggccaaagtgacaattttctactttcactttggtccctgtga 53959063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 121 - 257
Target Start/End: Original strand, 3693996 - 3694132
Alignment:
Q  121 ttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacactt 220  Q
    ||||| |||||| |||||||||||||| ||| |||||  |||| |||| |||| ||| |||||| || ||||||||||||| | || | || ||| |||     
T  3693996 ttagggatttgagattcaatttgaggagattaattttttattcagggatcaaagtgaccattttgtactttcactttagtctccgttacacatcatactc 3694095  T
Q  221 cttctcagcataaaacatttgtcacaccatcacttaa 257  Q
    ||| |||||||||||||| || |||| ||||||||||    
T  3694096 cttgtcagcataaaacatgtgacacatcatcacttaa 3694132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 20 - 208
Target Start/End: Complemental strand, 48573341 - 48573145
Alignment:
Q  20 taagtatgtatagtgagggacctagcaacaagttgttgt-tttaatgaaagatttgattttgaacaaaagaggaaattagttgacatttaagaatttgag 118  Q
    |||||||||| ||| ||||||||| ||  |||||||||| ||||||| ||| ||  |||||||| |||||||  |||||| ||||||||| | |||||||    
T  48573341 taagtatgtacagtcagggacctaacagtaagttgttgtgtttaatggaaggtta-attttgaataaaagagagaattagatgacatttagggatttgag 48573243  T
Q  119 attta--------ggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    |||||        ||||||||| |||||||||  | ||||||||||| | |||  ||| |||| ||| ||||||||| ||||||||| ||||||||||    
T  48573242 atttaagaatttaggaatttgatattcaattttggaatattgatttttggttcatggatcaaagtgaccattttctactttcactttggtccctgtga 48573145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 208
Target Start/End: Complemental strand, 17700872 - 17700679
Alignment:
Q  20 taagtatgtatagtgagggacctagcaacaagttgttgttttaatgaaagatttgattttgaacaaaagaggaaattagttgacatttaagaatttgaga 119  Q
    |||||||||| ||| ||||||||| ||  |||||||   ||||||| ||||||  ||||||||||||| ||  |||||  ||||||||||| ||||||||    
T  17700872 taagtatgtacagtcagggacctaacagtaagttgtg--tttaatggaagatta-attttgaacaaaatagagaattatatgacatttaaggatttgaga 17700776  T
Q  120 ttta--------ggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    ||||        ||||||||| |||||||||  |  ||||||||||   ||| ||||||||| ||| ||||||||| ||||||||| ||||||||||    
T  17700775 tttaagaatttaggaatttgatattcaattttggattattgattttttgttcagggaccaaagtgaccattttctactttcactttggtccctgtga 17700679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 208
Target Start/End: Complemental strand, 53957923 - 53957833
Alignment:
Q  118 gatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    |||||||| |||||| |||||||||| ||||||||||||| | |||  |||| ||| | ||||||||||| ||||||||| ||||| ||||    
T  53957923 gatttagggatttgacattcaatttggggatattgatttttggttcatggactaaagtaatcattttctactttcactttggtccccgtga 53957833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 115 - 208
Target Start/End: Original strand, 47117942 - 47118034
Alignment:
Q  115 tgagatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    ||||||||||| ||| || |||||| ||| ||||||||||||| | ||| ||||| ||| ||| || ||||||||||||||||||||| |||||    
T  47117942 tgagatttagggattcgagattcaagttggggatattgatttttggttcagggactaaagtgacca-tttctattttcactttagtccttgtga 47118034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 208
Target Start/End: Complemental strand, 19114760 - 19114673
Alignment:
Q  120 tttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    |||||| |||||| |||||| ||| ||||||||||||| ||||| ||||  ||| ||| ||||||||| |||||||||||||| |||||    
T  19114760 tttagggatttgagattcaagttg-ggatattgatttttgattcagggattaaagtgaccattttctactttcactttagtccttgtga 19114673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 131
Target Start/End: Complemental strand, 40206234 - 40206162
Alignment:
Q  59 tttaatgaaagatttgattttgaacaaaagaggaaattagttgacatttaagaatttgagatttaggaatttg 131  Q
    ||||||| ||||||| ||||||||| |||||||||||||| ||| |||||   |||||||||||||| |||||    
T  40206234 tttaatggaagatttaattttgaactaaagaggaaattagatgagatttagagatttgagatttagggatttg 40206162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 127 - 198
Target Start/End: Complemental strand, 33837404 - 33837333
Alignment:
Q  127 atttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcacttta 198  Q
    |||||||||||||| || ||||||||||||| | ||| ||||||||| ||| ||||||||| ||||| ||||    
T  33837404 atttgaaattcaatctggggatattgatttttggttcagggaccaaagtgaccattttctactttcatttta 33837333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 202
Target Start/End: Original strand, 48809529 - 48809612
Alignment:
Q  119 atttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtcc 202  Q
    |||||||||||||| |||||||||  | ||||||||||| | |||  ||| |||| ||| ||||||||| ||||||||||||||    
T  48809529 atttaggaatttgatattcaatttaggaatattgatttttggttcatggatcaaagtgaccattttctactttcactttagtcc 48809612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 47118037 - 47118085
Alignment:
Q  251 cacttaacaaaattatttaacaccagggattaaagtgataacaaaagtg 299  Q
    |||||||||||||||||||||  |||||| |||||||||||| ||||||    
T  47118037 cacttaacaaaattatttaacgtcagggactaaagtgataacgaaagtg 47118085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 130
Target Start/End: Complemental strand, 2591930 - 2591872
Alignment:
Q  72 ttgattttgaacaaaagaggaaattagttgacatttaagaatttgagatttaggaattt 130  Q
    |||||||||||||||||||  |||||| |||||||||   |||||||||||| ||||||    
T  2591930 ttgattttgaacaaaagagagaattagatgacatttagagatttgagatttaagaattt 2591872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 208
Target Start/End: Complemental strand, 33427965 - 33427891
Alignment:
Q  134 attcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    |||||| ||| ||||||||||||| | ||| ||| | ||| |||| |||||||| |||||||||||||| |||||    
T  33427965 attcaagttggggatattgatttttggttcaggggctaaagtgataattttctactttcactttagtccatgtga 33427891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 118 - 208
Target Start/End: Original strand, 36280190 - 36280280
Alignment:
Q  118 gatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    ||||||||||||||| |||||||||| | ||||||||||| | ||  ||||| ||| ||| ||||||||  ||||| ||| |||| |||||    
T  36280190 gatttaggaatttgatattcaatttgggaatattgatttttggtttagggactaaagtgaccattttcttctttcattttggtccgtgtga 36280280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 175
Target Start/End: Complemental strand, 2323274 - 2323217
Alignment:
Q  118 gatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaat 175  Q
    |||||||| |||||  ||||||||| |||||||| |||||||||||  ||||||||||    
T  2323274 gatttagggatttgtgattcaatttaaggatattaattttcgattcaaggaccaaaat 2323217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 330
Target Start/End: Complemental strand, 50753980 - 50753875
Alignment:
Q  225 tcagcataaaacatttgtcacaccatcacttaacaaaattatttaacaccagggattaaagtgataacaaaagtgtacattcaaatattactttatattt 324  Q
    |||| |||| |||| || |||| |||||||||||| | || ||||||  |||||| ||||||||||||| ||||||| | ||| | | |  |||||||||    
T  50753980 tcagtataagacatgtgccacatcatcacttaacagatttttttaacggcagggactaaagtgataacagaagtgtagagtcagaaacttgtttatattt 50753881  T
Q  325 aatcct 330  Q
    ||||||    
T  50753880 aatcct 50753875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 3e-35; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 140 - 288
Target Start/End: Original strand, 14887373 - 14887521
Alignment:
Q  140 tttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatt 239  Q
    ||||||||||||||||||  |||| ||||||| | ||| ||||||||| |||||||||||||||||||| || ||| ||| ||| | |||||||||||||    
T  14887373 tttgaggatattgatttttaattcagggaccatattgaccattttctactttcactttagtccctgtgacacctcatactccttgttagcataaaacatt 14887472  T
Q  240 tgtcacaccatcacttaacaaaattatttaacaccagggattaaagtga 288  Q
    ||||||| ||||| |||||||||||||||||| | || |||||||||||    
T  14887473 tgtcacatcatcagttaacaaaattatttaacgctagagattaaagtga 14887521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 121 - 271
Target Start/End: Original strand, 21733627 - 21733777
Alignment:
Q  121 ttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacactt 220  Q
    ||||| |||||| |||||||||| | ||||||||||||| ||| | ||||||| ||| |||||| || |||||||||||||   |||| |||||| |||     
T  21733627 ttagggatttgagattcaatttgggaatattgattttcggttcagagaccaaagtgaccattttttactttcactttagtcatcgtgacacttcatactc 21733726  T
Q  221 cttctcagcataaaacatttgtcacaccatcacttaacaaaattatttaac 271  Q
    ||| |||||||||||||| ||||||| |||||||||||| |||| ||||||    
T  21733727 cttgtcagcataaaacatgtgtcacatcatcacttaacagaattttttaac 21733777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 59 - 208
Target Start/End: Complemental strand, 14704313 - 14704165
Alignment:
Q  59 tttaatgaaagatttgattttgaacaaaagaggaaattagttgacatttaagaatttgagatttaggaatttgaaattcaatttgaggatattgattttc 158  Q
    ||||||| |||||| |||||||||||||| |   |||||| ||||||||||| |||| ||||||||| |||||| |||||||||| |||||||||||||     
T  14704313 tttaatggaagatt-gattttgaacaaaaaatataattagatgacatttaaggatttaagatttagggatttgatattcaatttggggatattgattttt 14704215  T
Q  159 gattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    | |||  |||||||| |||  |||||||| ||||||||| ||||||||||    
T  14704214 ggttcatggaccaaagtgactattttctactttcactttggtccctgtga 14704165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 144 - 304
Target Start/End: Complemental strand, 26585319 - 26585162
Alignment:
Q  144 aggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgtc 243  Q
    |||||||| ||||||| ||| ||||||||| ||| ||||| |||||||||||||||||||||||| || ||| ||| ||| ||| ||||||| ||  |||    
T  26585319 aggatatttattttcggttcagggaccaaagtgaccattt-ctattttcactttagtccctgtgacacctcatactccttgtcaacataaaatat--gtc 26585223  T
Q  244 acaccatcacttaacaaaattatttaacaccagggattaaagtgataacaaaagtgtacat 304  Q
    ||| ||||| |||||| ||||||||||| | || || ||||||||||||| ||||||||||    
T  26585222 acatcatcaattaacataattatttaacgctagagactaaagtgataacagaagtgtacat 26585162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 165 - 330
Target Start/End: Original strand, 12746101 - 12746266
Alignment:
Q  165 gggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgtcacaccatcacttaacaaaatt 264  Q
    |||| |||||||||||||||||| |||||||||||||||||||| || ||| |||  || |||||||||||| |||||||||  ||||||||  | ||||    
T  12746101 gggatcaaaatgatcattttctactttcactttagtccctgtgacacctcatactctttgtcagcataaaacttttgtcacataatcacttactagaatt 12746200  T
Q  265 atttaacaccagggattaaagtgataacaaaagtgtacattcaaatattactttatatttaatcct 330  Q
    ||||||||  | ||| ||||||||||||  ||| | |||||||   | |||||| |||||||||||    
T  12746201 atttaacattatggactaaagtgataacggaagggcacattcaggaactactttgtatttaatcct 12746266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 225 - 330
Target Start/End: Original strand, 15441931 - 15442036
Alignment:
Q  225 tcagcataaaacatttgtcacaccatcacttaacaaaattatttaacaccagggattaaagtgataacaaaagtgtacattcaaatattactttatattt 324  Q
    ||||||||||||||||| |||| ||||| |||||||||||||||||||| || || ||||||||||| ||||||| ||||||||  | |||||| |||||    
T  15441931 tcagcataaaacatttgccacatcatcagttaacaaaattatttaacactagagactaaagtgataataaaagtgcacattcaaggactactttgtattt 15442030  T
Q  325 aatcct 330  Q
    ||||||    
T  15442031 aatcct 15442036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 136 - 299
Target Start/End: Original strand, 34037544 - 34037707
Alignment:
Q  136 tcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaa 235  Q
    |||||||||||||||||||||| | ||| || | |||| |||  |||||||| | |||||||||||  ||||| || ||| ||| ||| |||||||||||    
T  34037544 tcaatttgaggatattgatttttggttcaggaatcaaagtgactattttctactgtcactttagtctgtgtgacacctcatactccttgtcagcataaaa 34037643  T
Q  236 catttgtcacaccatcacttaacaaaattatttaacaccagggattaaagtgataacaaaagtg 299  Q
    ||| ||||||| |||||||||||| |||| ||||||  | || | ||||||||||||| |||||    
T  34037644 catgtgtcacatcatcacttaacataattttttaacggcgggaactaaagtgataacagaagtg 34037707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 119 - 200
Target Start/End: Complemental strand, 43380836 - 43380755
Alignment:
Q  119 atttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagt 200  Q
    ||||||||||||||||||||||||| ||||||||||||| | ||| ||||||||| ||| ||||||||| ||||||||||||    
T  43380836 atttaggaatttgaaattcaatttggggatattgatttttggttcagggaccaaagtgaccattttctactttcactttagt 43380755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 59 - 208
Target Start/End: Complemental strand, 24458376 - 24458220
Alignment:
Q  59 tttaatgaaagatttgattttgaacaaaagaggaaattagttgacatttaagaatttgagatttaggaattt--------gaaattcaatttgaggatat 150  Q
    ||||||| |||||| |||||||||||||| ||  |||||| ||||||||||| |||| | ||||||| ||||        || |||||||||||||||||    
T  24458376 tttaatggaagatt-gattttgaacaaaaaagataattagatgacatttaaggatttaaaatttagggatttagggatctgatattcaatttgaggatat 24458278  T
Q  151 tgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    ||||||| ||||  ||||||||| ||| ||||||||| ||||||||| ||||||||||    
T  24458277 tgatttttgattgagggaccaaagtgaccattttctactttcactttggtccctgtga 24458220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 118 - 202
Target Start/End: Original strand, 28864664 - 28864748
Alignment:
Q  118 gatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtcc 202  Q
    |||||||| ||||||||||||| ||| | |||||||||||| |||| || || ||||||||||||||||||||||||||||||||    
T  28864664 gatttagggatttgaaattcaacttgggaatattgattttcaattctggaactaaaatgatcattttctattttcactttagtcc 28864748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 76 - 208
Target Start/End: Original strand, 39016214 - 39016346
Alignment:
Q  76 ttttgaacaaaagaggaaattagttgacatttaagaatttgagatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaat 175  Q
    |||||||||||| ||  |||||| ||||||||||| |||| ||||||||| |||| | |||||||||| | ||||||||||| | ||| ||||||||| |    
T  39016214 ttttgaacaaaatagataattagatgacatttaaggatttaagatttagggatttcatattcaatttgggcatattgatttttggttcagggaccaaagt 39016313  T
Q  176 gatcattttctattttcactttagtccctgtga 208  Q
    ||  |||||||| ||||||||| |||| |||||    
T  39016314 gacaattttctactttcactttggtccatgtga 39016346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 143 - 305
Target Start/End: Complemental strand, 37607347 - 37607185
Alignment:
Q  143 gaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgt 242  Q
    ||||||||||||||| | ||| | ||||||| |||  ||||||||  ||||||||||||| ||||| |  ||| ||||||| | |||||||||| |||||    
T  37607347 gaggatattgatttttggttcagagaccaaagtgactattttctacgttcactttagtccttgtgacatctcatacttcttgttagcataaaacctttgt 37607248  T
Q  243 cacaccatcacttaacaaaattatttaacaccagggattaaagtgataacaaaagtgtacatt 305  Q
    |||  ||||| |||||| |||||| ||||  |||||| ||||||||||||  ||||| |||||    
T  37607247 cacgtcatcagttaacataattatataacgtcagggactaaagtgataacggaagtgcacatt 37607185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 59 - 204
Target Start/End: Complemental strand, 32765253 - 32765101
Alignment:
Q  59 tttaatgaaagatttgattttgaacaaaagaggaaattagttgacatttaagaatttga--------gatttaggaatttgaaattcaatttgaggatat 150  Q
    ||||||| |||||| |||||||||||||| ||  |||||| ||||||||||| |||| |        |||||||| |||||| |||||||||| ||||||    
T  32765253 tttaatggaagatt-gattttgaacaaaaaagataattagatgacatttaaggatttaaaatttagggatttagggatttgatattcaatttggggatat 32765155  T
Q  151 tgattttcgattcggggaccaaaatgatcattttctattttcactttagtccct 204  Q
    ||||||| | ||| |||||||||  || ||||||||| ||||||||||||||||    
T  32765154 tgatttttggttcagggaccaaagcgaccattttctactttcactttagtccct 32765101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 127 - 333
Target Start/End: Complemental strand, 12003828 - 12003622
Alignment:
Q  127 atttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctc 226  Q
    |||||| |||||||||| |||||||| |||||| ||  | ||||||||| |  ||||||||||||||||||||||||||||| |  |||  |   || |     
T  12003828 atttgatattcaatttggggatattggttttcggttgagagaccaaaattactattttctattttcactttagtccctgtgacatctcatgcactttgta 12003729  T
Q  227 agcataaaacatttgtcacaccatcacttaacaaaattatttaacaccagggattaaagtgataacaaaagtgtacattcaaatattactttatatttaa 326  Q
    ||||||||||||||| || | |||||  ||||| || | ||||||||||  || |||| | ||||  ||||||| |||||||  | ||||||||||||||    
T  12003728 agcataaaacatttgccaaatcatcagctaacataagtttttaacaccaaagactaaactaataatgaaagtgttcattcaaggactactttatatttaa 12003629  T
Q  327 tcctaag 333  Q
    || ||||    
T  12003628 tcttaag 12003622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 145 - 291
Target Start/End: Complemental strand, 18675326 - 18675181
Alignment:
Q  145 ggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgtca 244  Q
    ||||||| ||||| |||||  ||| |||| |||  |||||||| ||| |||||||||| ||||| || ||| |||| || ||||||||||||||||||||    
T  18675326 ggatattaatttttgattcaaggatcaaagtgacaattttctactttgactttagtcc-tgtgacacctcatactttttatcagcataaaacatttgtca 18675228  T
Q  245 caccatcacttaacaaaattatttaacaccagggattaaagtgataa 291  Q
    ||  |||| ||||||||||||||| || |||  || |||||||||||    
T  18675227 cattatcagttaacaaaattatttgacgccaaagactaaagtgataa 18675181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 118 - 208
Target Start/End: Original strand, 31443098 - 31443188
Alignment:
Q  118 gatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    ||||||||||||||| ||| ||||||  |||||||||||||| ||| || ||||||||||  |||||||| ||||||||||||| ||||||    
T  31443098 gatttaggaatttgagatttaatttggagatattgattttcggttcaggaaccaaaatgacaattttctactttcactttagtcactgtga 31443188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 145 - 329
Target Start/End: Original strand, 34582550 - 34582734
Alignment:
Q  145 ggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgtca 244  Q
    |||||||||||||  |||| ||||| ||| ||  ||||||||| ||| |||||||| | ||||| || ||| || |||| |||||||||||| |||| ||    
T  34582550 ggatattgattttttattcagggactaaagtggacattttctacttttactttagttcatgtgacacctcatacctcttgtcagcataaaacctttgcca 34582649  T
Q  245 caccatcacttaacaaaattatttaacaccagggattaaagtgataacaaaagtgtacattcaaatattactttatatttaatcc 329  Q
    ||  |||| || | | |||||||||||  |||||| ||||||||||||  ||||| |||||||   | |||||| ||||||||||    
T  34582650 catgatcagttgatataattatttaacgtcagggactaaagtgataacggaagtgcacattcagggactactttgtatttaatcc 34582734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 75 - 208
Target Start/End: Complemental strand, 39015306 - 39015165
Alignment:
Q  75 attttgaacaaaagaggaaattagttgacatttaagaatttgagatttagg--------aatttgaaattcaatttgaggatattgattttcgattcggg 166  Q
    ||||| ||||||||||  |||||| ||||||||| | ||||||||||||||        ||||||| |||||||||| | ||||||||||| | |||  |    
T  39015306 attttaaacaaaagagagaattagatgacatttagggatttgagatttagggattttggaatttgatattcaatttgggaatattgatttttggttcaag 39015207  T
Q  167 gaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    ||||||| ||| ||||||||| ||||||||| ||||||||||    
T  39015206 gaccaaactgaccattttctactttcactttggtccctgtga 39015165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 59 - 204
Target Start/End: Original strand, 40000142 - 40000294
Alignment:
Q  59 tttaatgaaagatttgattttgaacaaaagaggaaattagttgacatttaagaatttgagatttagg--------aatttgaaattcaatttgaggatat 150  Q
    ||||||||||||||  ||||||||||||||||  |||||| ||||| ||| | |||||||||||| |        ||||||| |||||||||| | ||||    
T  40000142 tttaatgaaagatta-attttgaacaaaagagagaattagatgacacttatggatttgagatttaaggatttagaaatttgatattcaatttgggaatat 40000240  T
Q  151 tgattttcgattcggggaccaaaatgatcattttctattttcactttagtccct 204  Q
    ||||||| | |||  |||||||| ||||||||||||| ||||||||| ||||||    
T  40000241 tgatttttggttcaaggaccaaagtgatcattttctactttcactttggtccct 40000294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 21732362 - 21732275
Alignment:
Q  121 ttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    ||||| |||||| |||||||||| ||||||| ||||| | ||| ||||||||| ||| ||||||||| ||||||||||||||| ||||    
T  21732362 ttagggatttgagattcaatttggggatattaatttttggttcagggaccaaagtgaccattttctactttcactttagtcccggtga 21732275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 130
Target Start/End: Complemental strand, 31442688 - 31442617
Alignment:
Q  59 tttaatgaaagatttgattttgaacaaaagaggaaattagttgacatttaagaatttgagatttaggaattt 130  Q
    ||||||| || |||||||||| |||||||||||||||||| ||| ||||| | |||||||||||||||||||    
T  31442688 tttaatggaaaatttgattttaaacaaaagaggaaattagatgagatttagggatttgagatttaggaattt 31442617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 118 - 292
Target Start/End: Complemental strand, 7412362 - 7412188
Alignment:
Q  118 gatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcaca 217  Q
    |||||||| |||||| |||||||||  |||||||| |||| | ||  |||| |||| ||| |||||||||||||||||||||||| ||||| || ||| |    
T  7412362 gatttagggatttgagattcaatttagggatattgttttttggttgagggaacaaagtgaccattttctattttcactttagtccttgtgacacatcata 7412263  T
Q  218 cttcttctcagcataaaacatttgtcacaccatcacttaacaaaattatttaacaccagggattaaagtgataac 292  Q
       | | ||| | |||||||| |||||   |||||||||||| ||||||||||    ||||| ||||||||||||    
T  7412262 tgccatgtcatcgtaaaacatgtgtcatgtcatcacttaacataattatttaatgttagggactaaagtgataac 7412188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 186 - 328
Target Start/End: Original strand, 38854601 - 38854743
Alignment:
Q  186 tattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgtcacaccatcacttaacaaaattatttaacaccagggattaaag 285  Q
    ||||||||||||||||||||||| |  ||| |||  || ||| | |||||| ||||  ||| | ||| || ||| |||||||||||  ||||||||||||    
T  38854601 tattttcactttagtccctgtgacaactcatactctttgtcaccttaaaacctttgctacatcgtcaatttacagaattatttaacgtcagggattaaag 38854700  T
Q  286 tgataacaaaagtgtacattcaaatattactttatatttaatc 328  Q
    |||||||||||||| | ||||||  | ||||||| ||||||||    
T  38854701 tgataacaaaagtgcatattcaataactactttacatttaatc 38854743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 208
Target Start/End: Original strand, 43381045 - 43381134
Alignment:
Q  119 atttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    ||||||| |||||| |||||||||  |||||||||||||   ||| |||||||||||||  |||||||||||| |||||||||| |||||    
T  43381045 atttagggatttgagattcaatttagggatattgattttgtgttcagggaccaaaatgactattttctatttttactttagtccttgtga 43381134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 204
Target Start/End: Original strand, 24459327 - 24459413
Alignment:
Q  118 gatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccct 204  Q
    |||||| |||||||| |||||||||| | ||||||||||| | ||| |||| |||| ||| ||||||||| ||||||||| ||||||    
T  24459327 gatttacgaatttgatattcaatttgggaatattgatttttggttcagggatcaaagtgaccattttctactttcactttggtccct 24459413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 327
Target Start/End: Original strand, 31814260 - 31814406
Alignment:
Q  181 ttttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgtcacaccatcacttaacaaaattatttaacaccagggat 280  Q
    ||||||||||||| |||||||  ||||| || ||| | ||| | ||| | |||||| | ||||||| |||||||||||| ||||||||||  | |||||     
T  31814260 ttttctattttcattttagtctatgtgacacctcatatttcatgtcatcgtaaaacttgtgtcacatcatcacttaacagaattatttaatgctagggac 31814359  T
Q  281 taaagtgataacaaaagtgtacattcaaatattactttatatttaat 327  Q
    ||||||||||||  ||||| | | ||||| | | |||||||||||||    
T  31814360 taaagtgataacggaagtgcagagtcaaaaacttctttatatttaat 31814406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 211
Target Start/End: Complemental strand, 2910350 - 2910257
Alignment:
Q  118 gatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatac 211  Q
    |||||||| ||| || |||||||||| ||||||||||||| | |||  |||||||| ||||||||||| | ||||| ||| |||| ||||||||    
T  2910350 gatttagggattcgatattcaatttggggatattgatttttggttcatggaccaaagtgatcattttcgactttcattttggtccttgtgatac 2910257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 208
Target Start/End: Original strand, 17330101 - 17330182
Alignment:
Q  127 atttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    |||||| |||||||||  ||||||||||||| | ||| ||||||||| ||| |||||| || ||||||||||||| ||||||    
T  17330101 atttgagattcaatttagggatattgattttgggttcagggaccaaagtgaccattttttactttcactttagtctctgtga 17330182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 255 - 328
Target Start/End: Original strand, 26586285 - 26586358
Alignment:
Q  255 taacaaaattatttaacaccagggattaaagtgataacaaaagtgtacattcaaatattactttatatttaatc 328  Q
    ||||| ||||||||||| |||| || ||||||||||||  ||||| ||||||||| | ||||||||||||||||    
T  26586285 taacataattatttaacgccagagactaaagtgataacggaagtgcacattcaaagactactttatatttaatc 26586358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 12010300 - 12010224
Alignment:
Q  127 atttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccc 203  Q
    |||||| |||||||||| ||||||||||||| | |||    |||||||||| ||||||||| |||||||||||||||    
T  12010300 atttgatattcaatttggggatattgatttttggttcatataccaaaatgaccattttctactttcactttagtccc 12010224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 271
Target Start/End: Original strand, 17466683 - 17466834
Alignment:
Q  119 atttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacac 218  Q
    ||||||| |||||||||| |||||  ||||||| ||||| | || ||| | |||| ||| |||||| || |||||||||||| | ||||| || ||| |     
T  17466683 atttagggatttgaaatttaatttagggatattaatttttggttaggg-atcaaattgaccattttttactttcactttagtgcgtgtgacacctcatat 17466781  T
Q  219 ttcttctcagcataaaacatttgtcacaccatcacttaacaaaattatttaac 271  Q
      ||| ||| | |||||||| ||||||| |||||||||||| |||||||||||    
T  17466782 gccttgtcatcctaaaacatgtgtcacatcatcacttaacagaattatttaac 17466834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 210
Target Start/End: Complemental strand, 31090407 - 31090315
Alignment:
Q  118 gatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgata 210  Q
    |||||| | |||||| |||||||||| ||||||| ||||| | ||| |||||||||  |  ||||||||| ||||||||| ||||||||||||    
T  31090407 gatttaaggatttgatattcaatttggggatattaatttttggttcagggaccaaagcggccattttctactttcactttggtccctgtgata 31090315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 118 - 208
Target Start/End: Complemental strand, 7073901 - 7073810
Alignment:
Q  118 gatttaggaatttgaaattcaatttgaggatattga-ttttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    |||||| | |||||| |||||||||  | ||||||| |||| | ||| ||||||||| |||||||||| ||||||| |||||||||||||||    
T  7073901 gatttaaggatttgagattcaatttaggaatattgaatttttggttcagggaccaaagtgatcattttttattttcgctttagtccctgtga 7073810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 225 - 328
Target Start/End: Original strand, 38856327 - 38856430
Alignment:
Q  225 tcagcataaaacatttgtcacaccatcacttaacaaaattatttaacaccagggattaaagtgataacaaaagtgtacattcaaatattactttatattt 324  Q
    ||||| |||||| |||||||||  |||| || ||| |||||||||||  ||| |||||||||||||||||||||| | | |||   | ||||||||||||    
T  38856327 tcagcttaaaacctttgtcacattatcaatttacagaattatttaacgtcagagattaaagtgataacaaaagtgcatactcaggaactactttatattt 38856426  T
Q  325 aatc 328  Q
    ||||    
T  38856427 aatc 38856430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 12011371 - 12011421
Alignment:
Q  145 ggatattgattttcgattcggggaccaaaatgatcattttctattttcact 195  Q
    ||||||||||||| ||||| | ||||||||||| |||||||||||||||||    
T  12011371 ggatattgatttttgattcagtgaccaaaatgaccattttctattttcact 12011421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 184 - 330
Target Start/End: Complemental strand, 38853959 - 38853813
Alignment:
Q  184 tctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgtcacaccatcacttaacaaaattatttaacaccagggattaa 283  Q
    |||| ||||| |||||||||||||| || ||| ||| ||| | |||||||||| ||||||||  ||| | |||||| |||||||||||  ||| || |||    
T  38853959 tctactttcaatttagtccctgtgacacctcatactccttgttagcataaaacttttgtcacgtcatgagttaacataattatttaacgtcagtgactaa 38853860  T
Q  284 agtgataacaaaagtgtacattcaaatattactttatatttaatcct 330  Q
    | |||||||  ||||| ||||| |   | |||||| |||||||||||    
T  38853859 attgataacggaagtgcacatttagggactactttgtatttaatcct 38853813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 197
Target Start/End: Original strand, 2911309 - 2911439
Alignment:
Q  75 attttgaacaaaagaggaaattagttgacatttaagaatttga--------gatttaggaatttgaaattcaatttgaggatattgattttcgattcggg 166  Q
    ||||||||||||||||  |||||| ||||||||| ||||||||        ||||||||||||||| ||||||||||   ||||||||||| | ||  |     
T  2911309 attttgaacaaaagagagaattagatgacatttaggaatttgagatttaaggatttaggaatttgatattcaatttggaaatattgatttttggttaaga 2911408  T
Q  167 gaccaaaatgatcattttctattttcacttt 197  Q
    ||||||| |||  |||||||| |||||||||    
T  2911409 gaccaaagtgacaattttctactttcacttt 2911439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 251
Target Start/End: Original strand, 12004842 - 12004983
Alignment:
Q  110 gaatttgagatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgat 209  Q
    ||||||| |||||||| |||  | |||||||||| |||||||| |||||| ||  |||||||||| ||  |||||||  ||| |||||||||  |||||     
T  12004842 gaatttgggatttagggattgaagattcaatttggggatattggttttcggttaagggaccaaaacgacaattttcttctttaactttagtcgatgtgac 12004941  T
Q  210 acttcacacttcttctcagcataaaacatttgtcacaccatc 251  Q
     | |||  | |||| |||||| ||||||||||||||| ||||    
T  12004942 ccctcatgcctcttgtcagcacaaaacatttgtcacatcatc 12004983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 121
Target Start/End: Complemental strand, 33162069 - 33162020
Alignment:
Q  72 ttgattttgaacaaaagaggaaattagttgacatttaagaatttgagatt 121  Q
    |||||||||||||||||||  |||||| ||||||||||| ||||||||||    
T  33162069 ttgattttgaacaaaagagataattagatgacatttaaggatttgagatt 33162020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 31091349 - 31091490
Alignment:
Q  75 attttgaacaaaagaggaaattagttgacatttaagaatttgagatt--------taggaatttgaaattcaatttgaggatattgattttcgattcggg 166  Q
    ||||||||||||||||  |||||| ||||||||| | ||||||||||        ||||||||||| ||||||| |  | ||||||||||| | |||       
T  31091349 attttgaacaaaagagagaattagatgacatttacggatttgagatttaaggatttaggaatttgatattcaatctcggaatattgatttttggttcaaa 31091448  T
Q  167 gaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    ||||||| ||| ||||||||| ||||||||| ||| ||||||    
T  31091449 gaccaaagtgaccattttctactttcactttggtctctgtga 31091490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 202
Target Start/End: Complemental strand, 31442597 - 31442517
Alignment:
Q  122 taggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtcc 202  Q
    |||| |||||| |||||||||  ||||||||||||||| ||| ||||||||  || |||||||  | ||||||||||||||    
T  31442597 tagggatttgagattcaatttagggatattgattttcggttcagggaccaatgtgttcatttttgactttcactttagtcc 31442517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 345
Target Start/End: Complemental strand, 38855028 - 38854832
Alignment:
Q  149 attgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgtcacacc 248  Q
    ||||||||||| |||  |||||||  |||  ||| |||| ||||| ||||| |||||||| || ||| ||| ||| | ||||||||   ||||||||  |    
T  38855028 attgattttcggttcaaggaccaaggtgactattatctactttcaatttagcccctgtgacacctcatactccttgttagcataaattttttgtcacgtc 38854929  T
Q  249 atcacttaacaaaattatttaacaccagggattaaagtgataacaaaagtgtacattcaaatattactttatatttaatcctaagccaaagatcttt 345  Q
    || | |||||| |||||||||||  ||| || |||| |||||||| ||||| ||||| |   | |||||| ||||||||||| || |||||| ||||    
T  38854928 atgagttaacataattatttaacttcagtgactaaattgataacataagtgcacatttaggaactactttgtatttaatcctgagtcaaagaccttt 38854832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 271
Target Start/End: Original strand, 39256872 - 39257027
Alignment:
Q  118 gatttaggaatttgaaattcaatttgaggatattgattttcgattcgggg--accaaaatgatcattttctattttcactttagtccctgtgatacttca 215  Q
    |||||||| |||||| |||||||| | | ||||| ||||| | ||| ||   |||||| ||| ||||||||| |||||| ||||| | | ||| || |||    
T  39256872 gatttagggatttgagattcaattggggaatattaatttttggttcaggagaaccaaagtgaccattttctaatttcacattagttcatatgacacatca 39256971  T
Q  216 cacttcttctcagcataaaacatttgtcacaccatcacttaacaaaattatttaac 271  Q
     |  || | ||| |||||||||| |||||| ||||||||||||| |||||||||||    
T  39256972 tatgtcatgtcatcataaaacatctgtcacgccatcacttaacataattatttaac 39257027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 125
Target Start/End: Original strand, 12004774 - 12004829
Alignment:
Q  70 atttgattttgaacaaaagaggaaattagttgacatttaagaatttgagatttagg 125  Q
    |||||||||||||||||||||  |||||| ||| ||||| |||||||| |||||||    
T  12004774 atttgattttgaacaaaagagataattagatgagatttatgaatttgatatttagg 12004829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 98
Target Start/End: Complemental strand, 12010396 - 12010357
Alignment:
Q  59 tttaatgaaagatttgattttgaacaaaagaggaaattag 98  Q
    ||||||| ||||||||||||||||||||| ||||||||||    
T  12010396 tttaatggaagatttgattttgaacaaaataggaaattag 12010357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 174
Target Start/End: Original strand, 33163320 - 33163367
Alignment:
Q  127 atttgaaattcaatttgaggatattgattttcgattcggggaccaaaa 174  Q
    ||||||||||||||||| ||||||||||||| | ||| ||||||||||    
T  33163320 atttgaaattcaatttggggatattgatttttggttcagggaccaaaa 33163367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 395 - 433
Target Start/End: Original strand, 16463590 - 16463628
Alignment:
Q  395 aataatcgtctcttttcccatttttatttttctcaaaat 433  Q
    |||||| |||||||| |||||||||||||||||||||||    
T  16463590 aataattgtctctttacccatttttatttttctcaaaat 16463628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 6e-33; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 165 - 329
Target Start/End: Complemental strand, 31074217 - 31074053
Alignment:
Q  165 gggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgtcacaccatcacttaacaaaatt 264  Q
    ||||||||| ||||||||||||||||||||||||||||| |||| || ||| ||  ||| | ||||||||||||||| |||| ||||| |||||||||||    
T  31074217 gggaccaaagtgatcattttctattttcactttagtccccgtgacacctcataccccttgttagcataaaacatttgccacatcatcagttaacaaaatt 31074118  T
Q  265 atttaacaccagggattaaagtgataacaaaagtgtacattcaaatattactttatatttaatcc 329  Q
    ||||||  |||| || ||||||||||||| ||||| ||||||| | | ||||||  |||||||||    
T  31074117 atttaattccagagactaaagtgataacagaagtgcacattcagaaactactttgcatttaatcc 31074053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 59 - 204
Target Start/End: Original strand, 1952785 - 1952929
Alignment:
Q  59 tttaatgaaagatttgattttgaacaaaagaggaaattagttgacatttaagaatttgagatttaggaatttgaaattcaatttgaggatattgattttc 158  Q
    ||||||| |||||| |||||||||||||||||  |||||| ||||||||||| |||| ||||||||| |||||| |||||||||| | |||||||||||     
T  1952785 tttaatggaagatt-gattttgaacaaaagagataattagatgacatttaaggatttaagatttagggatttgatattcaatttgggcatattgattttt 1952883  T
Q  159 gattcggggaccaaaatgatcattttctattttcactttagtccct 204  Q
    | ||| ||||||||| ||| ||||||||| ||||||||| ||||||    
T  1952884 ggttcagggaccaaagtgaccattttctactttcactttggtccct 1952929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 72 - 292
Target Start/End: Original strand, 5737832 - 5738050
Alignment:
Q  72 ttgattttgaacaaaagaggaaattagttgacatttaagaatttgagatttaggaatttgaaattcaatttgaggatattgattttcgattcggggacca 171  Q
    |||||||||||||||||||  |||||| |||||||||   |||||||||||||| |||||| |||||||||| ||||||||||||| ||||  | |||||    
T  5737832 ttgattttgaacaaaagagataattagatgacatttag--atttgagatttagggatttgagattcaatttggggatattgatttttgatttagagacca 5737929  T
Q  172 aaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgtcacaccatcacttaacaaaattatttaac 271  Q
    || ||| |||||| || ||| |||||||||| ||||| || ||| |  || | ||| |||| | ||| ||| ||| |||||||||||| |||||||||||    
T  5737930 aagtgaccattttttacttttactttagtccatgtgacacctcatatgtcatgtcatcatataccatgtgttacatcatcacttaacagaattatttaac 5738029  T
Q  272 accagggattaaagtgataac 292  Q
     |||  || | ||||||||||    
T  5738030 gccaaagactgaagtgataac 5738050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 145 - 330
Target Start/End: Complemental strand, 28525001 - 28524816
Alignment:
Q  145 ggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgtca 244  Q
    ||||||||||||||| |||  ||||||||||||  ||||| || |||||||||||||| | ||| |||||| |||  || ||| |||||||  |||| ||    
T  28525001 ggatattgattttcggttcacggaccaaaatgacaattttttactttcactttagtccatctgacacttcatactctttgtcaacataaaatctttgcca 28524902  T
Q  245 caccatcacttaacaaaattatttaacaccagggattaaagtgataacaaaagtgtacattcaaatattactttatatttaatcct 330  Q
    || ||||| ||||||||||||||||||  ||| || |||| |||||||  ||||| ||||||||  |||||||| |||||||||||    
T  28524901 catcatcagttaacaaaattatttaacgtcagagactaaaatgataacggaagtgcacattcaaggattactttgtatttaatcct 28524816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 140 - 327
Target Start/End: Original strand, 28006471 - 28006657
Alignment:
Q  140 tttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatt 239  Q
    |||| |||||||||||||   ||| | ||||||| ||| || ||||||||||||||||||||| |||||||| ||| ||| | | ||||||| |||| ||    
T  28006471 tttggggatattgatttttagttcagtgaccaaagtgaccactttctattttcactttagtccttgtgatacatcatactccctgtcagcat-aaacttt 28006569  T
Q  240 tgtcacaccatcacttaacaaaattatttaacaccagggattaaagtgataacaaaagtgtacattcaaatattactttatatttaat 327  Q
    ||||| | ||||| |||||| |||||||||||  ||||| |||||||||||||  ||||  ||||||||  | |||||||||||||||    
T  28006570 tgtcatatcatcagttaacagaattatttaacgtcaggggttaaagtgataacggaagtacacattcaaggactactttatatttaat 28006657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 140 - 327
Target Start/End: Original strand, 28063774 - 28063960
Alignment:
Q  140 tttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatt 239  Q
    |||| |||||||||||||   ||| | ||||||| ||| || ||||||||||||||||||||| |||||||| ||| ||| | | ||||||| |||| ||    
T  28063774 tttggggatattgatttttagttcagtgaccaaagtgaccactttctattttcactttagtccttgtgatacatcatactccctgtcagcat-aaacttt 28063872  T
Q  240 tgtcacaccatcacttaacaaaattatttaacaccagggattaaagtgataacaaaagtgtacattcaaatattactttatatttaat 327  Q
    ||||| | ||||| |||||| |||||||||||  ||||| |||||||||||||  ||||  ||||||||  | |||||||||||||||    
T  28063873 tgtcatatcatcagttaacagaattatttaacgtcaggggttaaagtgataacggaagtacacattcaaggactactttatatttaat 28063960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 140 - 333
Target Start/End: Complemental strand, 9625438 - 9625245
Alignment:
Q  140 tttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatt 239  Q
    ||||||||||||||||||||||||  | || ||| ||| ||||||||| |||||||||| ||  |  |||| | || ||| ||| |||||||||||||||    
T  9625438 tttgaggatattgattttcgattcacgaactaaagtgaccattttctactttcactttaatctttacgataatccatactccttgtcagcataaaacatt 9625339  T
Q  240 tgtcacaccatcacttaacaaaattatttaacaccagggattaaagtgataacaaaagtgtacattcaaatattactttatatttaatcctaag 333  Q
    ||||||   |||| |||||| ||||||||||||| |  || |||||||||||   ||||| | |||||| || |||||| | ||||||||||||    
T  9625338 tgtcacctaatcagttaacataattatttaacactaaagactaaagtgataatggaagtgcatattcaagtactactttgtgtttaatcctaag 9625245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 116 - 301
Target Start/End: Complemental strand, 5737114 - 5736929
Alignment:
Q  116 gagatttaggaatttgaaattcaatttgaggatatt-gattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttc 214  Q
    |||||||| | |||||| |||||||||| ||||||| |||||| |  || ||||||||| |||| |||| ||| ||| |||||||||| ||||| || ||    
T  5737114 gagatttaaggatttgagattcaatttggggatatttgatttttggatcagggaccaaagtgataattt-ctacttttactttagtccttgtgacacctc 5737016  T
Q  215 acacttcttctcagcataaaacatttgtcacaccatcacttaacaaaattatttaacaccagggattaaagtgataacaaaagtgta 301  Q
    | |  || | ||| | |||||| | ||||||| ||||||||||||||||||||||||   ||||| |||||||||||| ||||||||    
T  5737015 atatgtcatgtcatcgtaaaacctgtgtcacatcatcacttaacaaaattatttaacgtgagggactaaagtgataacgaaagtgta 5736929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 118 - 208
Target Start/End: Original strand, 32898318 - 32898408
Alignment:
Q  118 gatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    |||||||| |||||| |||||||||||||||||||||||| | ||| ||||||||| ||| ||||||||| ||||||||| |||| |||||    
T  32898318 gatttagggatttgatattcaatttgaggatattgatttttggttcagggaccaaagtgaccattttctactttcactttggtccttgtga 32898408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 140 - 347
Target Start/End: Complemental strand, 24199179 - 24198975
Alignment:
Q  140 tttgaggatattgatttt-cgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacat 238  Q
    |||| ||||||||||||| |||||| |||||||||||||||||||| || ||||||||||||  |||||| || ||| ||  ||| ||||||||||||||    
T  24199179 tttggggatattgatttttcgattcagggaccaaaatgatcattttttactttcactttagtatctgtgacacctcataccccttgtcagcataaaacat 24199080  T
Q  239 ttgtcacaccatcacttaacaaaattatttaacaccagggattaaagtgataacaaaagtgtacattcaaatattactttatatttaatcctaagccaaa 338  Q
    |||  ||  ||||    |||| ||||||| |||   |  || ||||||||||||  ||||| ||||||||  |||||||| ||||||||||| |  ||||    
T  24199079 ttgctacgtcatc----aacataattattcaacgaaaaagactaaagtgataacggaagtgcacattcaatgattactttgtatttaatcctgaatcaaa 24198984  T
Q  339 gatctttgt 347  Q
    || ||||||    
T  24198983 gacctttgt 24198975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 139 - 272
Target Start/End: Complemental strand, 33315107 - 33314974
Alignment:
Q  139 atttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacat 238  Q
    ||||| ||||||| |||||| ||||  |||||||| |||  |||||||| ||||||||| |||| ||||| || ||| ||| ||| |||||| |||||||    
T  33315107 atttggggatattaattttcaattcacggaccaaagtgactattttctactttcactttggtccatgtgacacctcatactccttgtcagcaaaaaacat 33315008  T
Q  239 ttgtcacaccatcacttaacaaaattatttaaca 272  Q
     ||||||  |||||||||||| |||| |||||||    
T  33315007 gtgtcacttcatcacttaacagaattttttaaca 33314974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 20 - 208
Target Start/End: Complemental strand, 35177747 - 35177554
Alignment:
Q  20 taagtatgtatagtgagggacctagcaacaagttgttgttttaatgaaagatttgattttgaacaaaagaggaaattagttgacatttaagaatttgaga 119  Q
    |||||||| ||||| ||||||||| ||| | |||| |||||  ||  |||||| |||||||||||||| ||  |||||| ||||||||||| |||| |||    
T  35177747 taagtatgcatagtcagggacctaacaataggttggtgttt--atagaagatt-gattttgaacaaaaaagataattaggtgacatttaaggatttaaga 35177651  T
Q  120 tttagga--------atttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    |||||||        |||||| |||||||||| ||||| ||||||| | ||| ||||||||| | | ||||||||| ||||||||| |||| |||||    
T  35177650 tttaggaatttagggatttgatattcaatttggggatactgatttttggttcagggaccaaagtaaccattttctactttcactttggtccttgtga 35177554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 119 - 215
Target Start/End: Original strand, 41122616 - 41122712
Alignment:
Q  119 atttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttca 215  Q
    |||||||||||||| ||||||||||  |||||||||||| | ||| |||| |||| |||  ||||||||||||||||||||||  ||||| ||||||    
T  41122616 atttaggaatttgagattcaatttggagatattgatttttggttcagggatcaaagtgacgattttctattttcactttagtcaatgtgacacttca 41122712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 111 - 291
Target Start/End: Original strand, 45476409 - 45476589
Alignment:
Q  111 aatttgagatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgata 210  Q
    |||||| |||||||  |||||| ||| |||||| | ||||||||||| | ||| ||||| ||| ||| ||||||||| ||| ||||| |||| | ||| |    
T  45476409 aatttgggatttagagatttgagatttaatttgggaatattgatttttggttcagggactaaagtgaccattttctacttttactttggtccatatgaca 45476508  T
Q  211 cttcacacttcttctcagcataaaacatttgtcacaccatcacttaacaaaattatttaacaccagggattaaagtgataa 291  Q
    | ||| ||||||| ||||||||| ||||  | |||| |||||||||||| | || ||||||  ||| || |||||||||||    
T  45476509 catcatacttcttgtcagcataagacatgcgccacatcatcacttaacatatttttttaacgacagagactaaagtgataa 45476589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 246
Target Start/End: Original strand, 39138510 - 39138645
Alignment:
Q  111 aatttgagatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgata 210  Q
    |||| |||||||||| |||||| |||||||| | ||||||||||||||| | |  | | |||| ||| ||||||||| |||||||||||||| ||||| |    
T  39138510 aattcgagatttagggatttgagattcaattcggggatattgattttcggtacaagaatcaaagtgaccattttctactttcactttagtccttgtgaca 39138609  T
Q  211 cttcacacttcttctcagcataaaacatttgtcaca 246  Q
    | ||| ||   || |||||||||||| |||||||||    
T  39138610 cctcatacactttgtcagcataaaacttttgtcaca 39138645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 59 - 330
Target Start/End: Original strand, 5965229 - 5965507
Alignment:
Q  59 tttaatgaaagatttgattttgaacaaaagaggaaattagttgacatttaagaatttgagatttagga--------atttgaaattcaatttgaggatat 150  Q
    ||||||| |||||| |||||||||||||||||  |||||| ||||| ||| | |||| ||||||||||        ||||||||||||||||| ||||||    
T  5965229 tttaatggaagatt-gattttgaacaaaagagataattagatgacacttagggatttaagatttaggaatttagagatttgaaattcaatttgtggatat 5965327  T
Q  151 tgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgtcacaccat 250  Q
    |||||||   |||   |||||||||||  |||||||| |||||||||| ||  ||||| || ||| |  || | ||| | || ||||| | ||||| |||    
T  5965328 tgatttttacttcatagaccaaaatgacaattttctactttcactttactctttgtgacacatcaaatgtcatgtcatcgtataacatgtatcacatcat 5965427  T
Q  251 cacttaacaaaattatttaacaccagggattaaagtgataacaaaagtgtacattcaaatattactttatatttaatcct 330  Q
     |||||||| ||| |||||||  ||| || ||||||||||||  ||||| | | ||||| | | |||| |||||||||||    
T  5965428 tacttaacataatcatttaacgtcagagactaaagtgataacggaagtgcagagtcaaagacttctttgtatttaatcct 5965507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 118 - 204
Target Start/End: Original strand, 35178678 - 35178764
Alignment:
Q  118 gatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccct 204  Q
    |||||| |||||||| |||||||||| | ||||||||||| | ||| ||| ||||| ||||||||||||| ||||||||| ||||||    
T  35178678 gatttaagaatttgatattcaatttgggaatattgatttttggttcaggggccaaagtgatcattttctagtttcactttggtccct 35178764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 299
Target Start/End: Complemental strand, 30134836 - 30134655
Alignment:
Q  118 gatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcaca 217  Q
    |||||| | ||||||||||||||||| | ||||||||||| | ||   |||||||| |||  |||||||| ||||||||||||| |||||| || ||| |    
T  30134836 gatttaaggatttgaaattcaatttgtgaatattgatttttggttaaaggaccaaagtgacaattttctactttcactttagtctctgtgacacatcaaa 30134737  T
Q  218 cttcttctcagcataaaacatttgtcacaccatcacttaacaaaattatttaacaccagggattaaagtgataacaaaagtg 299  Q
       | | ||| | |||||||| ||||||| |||||| ||||| |||||| ||||   ||  ||||||||||||||| |||||    
T  30134736 tgacatgtcatcgtaaaacatgtgtcacatcatcacctaacataattatataacgttagatattaaagtgataacagaagtg 30134655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 141 - 229
Target Start/End: Complemental strand, 41754215 - 41754127
Alignment:
Q  141 ttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagc 229  Q
    ||||||||||||||||||||||| ||||||||| |||  ||||| || |||||||||||||||| ||| || ||| ||| ||| |||||    
T  41754215 ttgaggatattgattttcgattcagggaccaaagtgactattttttactttcactttagtccctatgacacgtcatactccttgtcagc 41754127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 201
Target Start/End: Original strand, 28526425 - 28526480
Alignment:
Q  146 gatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtc 201  Q
    |||||||||||||| |||  | ||||||||||||||||||||||||||||||||||    
T  28526425 gatattgattttcggttcaagaaccaaaatgatcattttctattttcactttagtc 28526480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 145 - 292
Target Start/End: Original strand, 31075171 - 31075317
Alignment:
Q  145 ggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgtca 244  Q
    ||||||||||||||  ||| ||||||||| ||| || |||||| ||||| |||||||| ||||| || ||  ||| ||| ||| |||||||| |||||||    
T  31075171 ggatattgattttcagttcagggaccaaagtgaccactttctactttca-tttagtccttgtgacacctcgtactccttgtcaccataaaacctttgtca 31075269  T
Q  245 caccatcacttaacaaaattatttaacaccagggattaaagtgataac 292  Q
    |  ||||| |||| | |||||||||||  ||| || ||||||||||||    
T  31075270 cgtcatcagttaatataattatttaacgtcagtgactaaagtgataac 31075317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 328
Target Start/End: Complemental strand, 28619230 - 28619049
Alignment:
Q  147 atattgattttcgattcggggaccaaaatgatcatttt-ctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgtcac 245  Q
    ||||||||||| ||||  ||||||||| ||| |||||| |||  ||||||||||||||| |||||| ||| |   | | ||| | |||||||| || |||    
T  28619230 atattgatttt-gattgagggaccaaagtgaccatttttctacattcactttagtccctatgatacatcaaatgccatgtcatcgtaaaacatgtgacac 28619132  T
Q  246 accatcacttaacaaaattatttaacaccagggattaaagtgataacaaaagtgtacattcaaatattactttatatttaatc 328  Q
    | ||||||||||||||||||||||||  | | || |||||||||||| |||||| | | ||||  ||| |||| |||||||||    
T  28619131 atcatcacttaacaaaattatttaacggccgagactaaagtgataacgaaagtgcagagtcaatgatttctttgtatttaatc 28619049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 208
Target Start/End: Original strand, 28619405 - 28619495
Alignment:
Q  118 gatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    |||||||| ||||||||||||||||| ||||||||||||| | |||  |||  ||| ||||||||||||| ||||  |||||||| |||||    
T  28619405 gatttagggatttgaaattcaatttggggatattgatttttggttcatggattaaagtgatcattttctactttcgatttagtccatgtga 28619495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 199
Target Start/End: Complemental strand, 41121366 - 41121294
Alignment:
Q  127 atttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttag 199  Q
    ||||||||||||||||| ||||||||||||| | |||  |||||||| |||  |||||||| |||||||||||    
T  41121366 atttgaaattcaatttggggatattgatttttggttcaaggaccaaagtgacaattttctactttcactttag 41121294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 208
Target Start/End: Complemental strand, 10406492 - 10406366
Alignment:
Q  75 attttgaacaaaagaggaaattagttgacatttaagaatttgagatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaa 174  Q
    ||||||||||||||||  |||||| ||||||||| |       ||||||||||||||| ||||||||||   ||||||||||| | ||| | |||||||     
T  10406492 attttgaacaaaagagagaattagatgacatttagg-------gatttaggaatttgatattcaatttggaaatattgatttttggttcagagaccaaag 10406400  T
Q  175 tgatcattttctattttcactttagtccctgtga 208  Q
    |||  |||||||| | ||||||| ||||||||||    
T  10406399 tgactattttctactatcactttggtccctgtga 10406366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 130
Target Start/End: Original strand, 10407353 - 10407461
Alignment:
Q  20 taagtatgtatagtgagggacctagcaacaagttgttgttttaatgaaagatttgattttgaacaaaagaggaaattagttgacatttaagaatttgaga 119  Q
    |||||||| | ||| | ||||||| ||||| |||| ||||| |||| |||||| |||||||||||||||||  |||||| ||||||||||| |||| ||     
T  10407353 taagtatgaacagtcacggacctaacaacaggttggtgttt-aatggaagatt-gattttgaacaaaagagataattagatgacatttaaggatttaagc 10407450  T
Q  120 tttaggaattt 130  Q
    |||||| ||||    
T  10407451 tttagggattt 10407461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 208
Target Start/End: Original strand, 32564362 - 32564452
Alignment:
Q  118 gatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    ||||||||||||||| |||||||  | ||||||| ||||| | |   ||||| ||||||||||||||||| | |||||||||||| |||||    
T  32564362 gatttaggaatttgagattcaatacggggatattcatttttggtcaagggactaaaatgatcattttctactatcactttagtccatgtga 32564452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 208
Target Start/End: Original strand, 41754687 - 41754749
Alignment:
Q  146 gatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    ||||||||||||||||||  |||||||| ||| |||||| || |||||||||| |||||||||    
T  41754687 gatattgattttcgattcatggaccaaagtgaccattttttactttcactttaatccctgtga 41754749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 252
Target Start/End: Original strand, 12637647 - 12637748
Alignment:
Q  151 tgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgtcacaccat 250  Q
    ||||||||  ||| ||||||||| ||||||| ||||| |||||||||||||| ||||| || ||| ||| ||| | || ||||||| |||| |||| |||    
T  12637647 tgattttcagttcagggaccaaagtgatcatattctactttcactttagtccatgtgacacatcatactccttgttagtataaaacctttgccacatcat 12637746  T
Q  251 ca 252  Q
    ||    
T  12637747 ca 12637748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 2561421 - 2561346
Alignment:
Q  133 aattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    |||||||||| |||||||||||||||| |||  | |||||||| |  |||||||| ||||| ||||||| ||||||    
T  2561421 aattcaattttaggatattgattttcggttcaagaaccaaaatcactattttctactttcattttagtcactgtga 2561346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 251
Target Start/End: Original strand, 9626340 - 9626447
Alignment:
Q  144 aggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgtc 243  Q
    |||||||| ||||||| ||| ||||  ||| || ||| |||||| |||||||||||| | ||||| || ||| |||  || |||||||||||| ||||||    
T  9626340 aggatattaattttcggttcagggattaaagtggtcaatttctactttcactttagttcatgtgacacctcatactctttgtcagcataaaacttttgtc 9626439  T
Q  244 acaccatc 251  Q
    ||| ||||    
T  9626440 acatcatc 9626447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 121
Target Start/End: Original strand, 41122572 - 41122633
Alignment:
Q  59 tttaatgaaagatttgattttgaacaaaagaggaaattagttgacatttaagaatttgagatt 121  Q
    ||||||| |||||| |||||||||||||||| |||||||  || |||||| ||||||||||||    
T  41122572 tttaatggaagatt-gattttgaacaaaagacgaaattatgtgtcatttaggaatttgagatt 41122633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 208
Target Start/End: Complemental strand, 8569649 - 8569568
Alignment:
Q  127 atttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    |||||| |||||||||| |||||||||||||   ||| |||| ||||||||| ||||| |  ||||| |||||||| |||||    
T  8569649 atttgagattcaatttgtggatattgatttttagttcagggatcaaaatgataattttttcctttcattttagtccatgtga 8569568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 170
Target Start/End: Complemental strand, 41754287 - 41754258
Alignment:
Q  141 ttgaggatattgattttcgattcggggacc 170  Q
    ||||||||||||||||||||||||||||||    
T  41754287 ttgaggatattgattttcgattcggggacc 41754258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 2e-32; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 72 - 291
Target Start/End: Complemental strand, 9537338 - 9537119
Alignment:
Q  72 ttgattttgaacaaaagaggaaattagttgacatttaagaatttgagatttaggaatttgaaattcaatttgaggatattgattttcgattcggggacca 171  Q
    |||| ||||||||||||||  |||||| ||||||||| | |||| ||||||||| |||||| |||||||||| ||||||||||||| ||||| |||| ||    
T  9537338 ttgactttgaacaaaagagagaattagatgacatttatggattttagatttagggatttgagattcaatttggggatattgatttttgattcagggatca 9537239  T
Q  172 aaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgtcacaccatcacttaacaaaattatttaac 271  Q
    || |||  |||||||| ||||||||||||| |||||| || ||| |   ||| ||  | |||||||| || |||| ||||||||| || |||||||||||    
T  9537238 aagtgactattttctactttcactttagtcactgtgacacatcatatgacttgtcgtcgtaaaacatgtgccacatcatcacttaccataattatttaac 9537139  T
Q  272 accagggattaaagtgataa 291  Q
      ||| || |||||||||||    
T  9537138 gtcagtgactaaagtgataa 9537119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 59 - 207
Target Start/End: Complemental strand, 4593170 - 4593021
Alignment:
Q  59 tttaatgaaagatttgattttgaacaaaagaggaaattagttgacatttaagaatttgagatttaggaa--tttgaaattcaatttgaggatattgattt 156  Q
    |||||||||||||| |||||||||||||||||  |||||| |||||||||||||||| ||||||||| |  ||| |  ||||||||| | ||||||||||    
T  4593170 tttaatgaaagatt-gattttgaacaaaagagataattagatgacatttaagaatttaagatttagggattttttattttcaatttgggcatattgattt 4593072  T
Q  157 tcgattcggggaccaaaatgatcattttctattttcactttagtccctgtg 207  Q
    | | ||| ||||||||| ||| ||||||||| ||||||||| |||||||||    
T  4593071 ttggttcagggaccaaagtgaccattttctactttcactttggtccctgtg 4593021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 4593931 - 4594064
Alignment:
Q  75 attttgaacaaaagaggaaattagttgacatttaagaatttgagatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaa 174  Q
    ||||||||||||||||  |||||| ||||||||| | ||||||||||||||||||||| |||||||||| | ||||||||||| | |||  |||| |  |    
T  4593931 attttgaacaaaagagataattagatgacatttagggatttgagatttaggaatttgatattcaatttgggaatattgatttttggttcatggactacga 4594030  T
Q  175 tgatcattttctattttcactttagtccctgtga 208  Q
    ||| ||||||||| ||||||||| ||||||||||    
T  4594031 tgaccattttctactttcactttggtccctgtga 4594064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 118 - 245
Target Start/End: Complemental strand, 34173530 - 34173403
Alignment:
Q  118 gatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcaca 217  Q
    |||||||  ||||||||||||||||| ||||||||||||| | ||| | ||||||| ||||||||||||| ||||| ||||||||||||||||| | |      
T  34173530 gatttagtgatttgaaattcaatttggggatattgatttttggttcagagaccaaagtgatcattttctactttcagtttagtccctgtgataccttatg 34173431  T
Q  218 cttcttctcagcataaaacatttgtcac 245  Q
    |  ||| |||||| ||||||||||||||    
T  34173430 caccttgtcagcacaaaacatttgtcac 34173403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 20 - 208
Target Start/End: Complemental strand, 40611613 - 40611420
Alignment:
Q  20 taagtatgtatagtgagggacctagcaacaagttgttgttttaatgaaagatttgattttgaacaaaagaggaaattagttgacatttaagaatttgaga 119  Q
    |||||||||| ||| ||||||||| ||  |||||||   ||||||||||||||  ||||||||||||||||  |||||  ||||||||| | ||||||||    
T  40611613 taagtatgtacagtcagggacctaacactaagttgtg--tttaatgaaagatta-attttgaacaaaagagagaattatatgacatttagggatttgaga 40611517  T
Q  120 ttta--------ggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    ||||        ||||||||| |||||||||| | ||||||||||| | ||| |||||| || ||| ||||||||| ||||||||| ||||||||||    
T  40611516 tttaaggatttaggaatttgatattcaatttgggaatattgatttttggttcagggacccaagtgaccattttctactttcactttggtccctgtga 40611420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 118 - 208
Target Start/End: Complemental strand, 2464919 - 2464829
Alignment:
Q  118 gatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    |||||||| |||||| |||||||||| ||||||||||||| | ||| ||||||||| ||| ||||||||| ||||||||| ||||||||||    
T  2464919 gatttagggatttgatattcaatttggggatattgatttttggttcagggaccaaagtgaccattttctactttcactttggtccctgtga 2464829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 118 - 271
Target Start/End: Original strand, 32555400 - 32555552
Alignment:
Q  118 gatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcaca 217  Q
    ||||||||||||||| ||| | | ||||  |||||||||||| ||| || |||||  |||  |||||||| |||||||||||||| ||||| || ||| |    
T  32555400 gatttaggaatttgagatttagtatgagattattgattttcggttcaggaaccaag-tgacaattttctactttcactttagtccatgtgacacctcata 32555498  T
Q  218 cttcttctcagcataaaacatttgtcacaccatcacttaacaaaattatttaac 271  Q
    || ||| |||||||||||| ||||||| | ||||| |||||| |||||||||||    
T  32555499 ctccttgtcagcataaaacctttgtcatatcatcaattaacataattatttaac 32555552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 75 - 208
Target Start/End: Complemental strand, 25590731 - 25590590
Alignment:
Q  75 attttgaacaaaagaggaaattagttgacatttaagaatttgagattta--------ggaatttgaaattcaatttgaggatattgattttcgattcggg 166  Q
    ||||||||||||||||  |||||| ||||||||| | ||||||||||||        ||||||||| |||||||||| | ||||||||||| | ||| |     
T  25590731 attttgaacaaaagagagaattagatgacatttatggatttgagatttaaggatttaggaatttgatattcaatttgggaatattgatttttggttcaga 25590632  T
Q  167 gaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    ||||||| ||| ||||||||| ||||||||| ||||||||||    
T  25590631 gaccaaagtgaccattttctactttcactttggtccctgtga 25590590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 118 - 208
Target Start/End: Original strand, 14891020 - 14891110
Alignment:
Q  118 gatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    |||||||||||||||||||||||||| | ||||||||||| ||||| ||||| ||| ||| ||||||||| | ||||||| |||| |||||    
T  14891020 gatttaggaatttgaaattcaatttgggaatattgatttttgattcagggactaaagtgaccattttctactatcactttggtccttgtga 14891110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 59 - 208
Target Start/End: Original strand, 545851 - 545999
Alignment:
Q  59 tttaatgaaagatttgattttgaacaaaagaggaaattagttgacatttaagaatttgagatttaggaatttgaaattcaatttgaggatattgattttc 158  Q
    ||||||| |||||| ||||  |||||||||||  |||||| ||||||||||  |||| ||||||||| |||||  |||||||||| | |||||||||||     
T  545851 tttaatggaagatt-gattcagaacaaaagagataattagatgacatttaacgatttaagatttagggatttgttattcaatttgggcatattgattttt 545949  T
Q  159 gattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    | |||  |||||||| |||  |||||||| ||||||||| |||| |||||    
T  545950 ggttcaaggaccaaagtgactattttctactttcactttggtccttgtga 545999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 127 - 244
Target Start/End: Original strand, 19271660 - 19271777
Alignment:
Q  127 atttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctc 226  Q
    ||||||||||||| |||  |||||||||||||| ||  |||| |||||||||||||||||| |||||||||||||| | |||||| |||  |  ||| |     
T  19271660 atttgaaattcaacttggagatattgattttcggtttagggatcaaaatgatcattttctactttcactttagtccatatgatacctcatgcaccttgtt 19271759  T
Q  227 agcataaaacatttgtca 244  Q
    |||| |||||||||||||    
T  19271760 agcacaaaacatttgtca 19271777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 179 - 328
Target Start/End: Original strand, 30970499 - 30970648
Alignment:
Q  179 cattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgtcacaccatcacttaacaaaattatttaacaccaggg 278  Q
    ||||||||| ||| |||||||| | |||||||| ||| |  || | |||||||||||||||||||||  ||||  |||||| ||||||||||    ||||    
T  30970499 cattttctacttttactttagttcttgtgatacatcatatgtcatgtcagcataaaacatttgtcacgtcatcggttaacagaattatttaatgttaggg 30970598  T
Q  279 attaaagtgataacaaaagtgtacattcaaatattactttatatttaatc 328  Q
    | ||||||||||||| || || ||||||||  |||||||| |||||||||    
T  30970599 actaaagtgataacagaaatgcacattcaatgattactttgtatttaatc 30970648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 175 - 328
Target Start/End: Original strand, 35538211 - 35538364
Alignment:
Q  175 tgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgtcacaccatcacttaacaaaattatttaacacc 274  Q
    |||| |||||||| |||||||||||||  ||||| || ||| |||  |||| |||||||||  |||||| || ||||| |||||| ||||||||||||      
T  35538211 tgataattttctactttcactttagtctttgtgacacctcatactctttcttagcataaaatgtttgtcgcatcatcagttaacagaattatttaacatt 35538310  T
Q  275 agggattaaagtgataacaaaagtgtacattcaaatattactttatatttaatc 328  Q
    | ||||||||||||||||  ||||| ||||| ||  | |||||| |||||||||    
T  35538311 aaggattaaagtgataacggaagtgcacattgaagaactactttgtatttaatc 35538364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 8075656 - 8075796
Alignment:
Q  75 attttgaacaaaagaggaaattagttgacatttaagaatttgagatttagg--------aatttgaaattcaatttgaggatattgattttcgattcggg 166  Q
    ||||||||||||||||  |||||| ||||||||| || |||||||||||||        ||||||| |||||||||| | ||||||||||| | ||| ||    
T  8075656 attttgaacaaaagagagaattagatgacatttagga-tttgagatttagggatataggaatttgatattcaatttgggaatattgatttttggttcagg 8075754  T
Q  167 gaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    ||||||| ||||||||||| | ||||||||| |||| |||||    
T  8075755 gaccaaagtgatcattttcgactttcactttggtccttgtga 8075796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 119 - 271
Target Start/End: Complemental strand, 21069557 - 21069406
Alignment:
Q  119 atttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacac 218  Q
    ||||||| |||||| |||||| ||||| ||||||||||||  ||| |||| |||| ||| ||||||||| |||||||||| ||| | ||| || ||| ||    
T  21069557 atttagggatttgagattcaagttgagaatattgattttcagttcagggatcaaa-tgaccattttctactttcactttaatccatatgacacgtcatac 21069459  T
Q  219 ttcttctcagcataaaacatttgtcacaccatcacttaacaaaattatttaac 271  Q
    | ||| ||| |||||  ||| || |||| ||||||||||||||||| ||||||    
T  21069458 tccttgtcaacataagtcatgtgccacatcatcacttaacaaaattttttaac 21069406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 330
Target Start/End: Original strand, 9537943 - 9538114
Alignment:
Q  159 gattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgtcacaccatcacttaac 258  Q
    ||||| ||||||||| ||| |||||| || |||||||||||||| ||||| || ||| |  || | ||| | |||||||| |||||||  ||||||||||    
T  9537943 gattcagggaccaaagtgaccattttatactttcactttagtccatgtgaaacatcatatgtcatatcatcgtaaaacatgtgtcacataatcacttaac 9538042  T
Q  259 aaaattatttaacaccagggattaaagtgataacaaaagtgtacattcaaatattactttatatttaatcct 330  Q
    | |||||||||||| ||| || |||| |||||||  ||||| ||| ||| | | | |||| |||||||||||    
T  9538043 ataattatttaacatcagagactaaaatgataacggaagtgcacaatcagagacttctttgtatttaatcct 9538114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 118 - 208
Target Start/End: Complemental strand, 32640538 - 32640448
Alignment:
Q  118 gatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    ||||||||||||||| |||||||||  | ||||||||||| | |||  |||||||| ||| ||||||||| ||||||||| ||||||||||    
T  32640538 gatttaggaatttgatattcaattttggaatattgatttttggttcaaggaccaaagtgaccattttctactttcactttggtccctgtga 32640448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 104 - 208
Target Start/End: Complemental strand, 8074714 - 8074610
Alignment:
Q  104 atttaagaatttgagatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccc 203  Q
    |||||||| || | ||||| || |||||| |||||||||| | ||||||||||| | ||| ||||||||| ||| ||||||||| ||||||||| || ||    
T  8074714 atttaagatttagggatttggggatttgatattcaatttgggcatattgatttttggttcagggaccaaagtgaccattttctactttcactttggtacc 8074615  T
Q  204 tgtga 208  Q
    |||||    
T  8074614 tgtga 8074610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 204
Target Start/End: Complemental strand, 16979252 - 16979176
Alignment:
Q  128 tttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccct 204  Q
    ||||| ||||| |||||||||||||||||| ||||| || |||||| ||| |||||| ||| |||||||||||||||    
T  16979252 tttgagattcagtttgaggatattgatttttgattcaggaaccaaagtgaccattttttatcttcactttagtccct 16979176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 59 - 131
Target Start/End: Complemental strand, 30970360 - 30970288
Alignment:
Q  59 tttaatgaaagatttgattttgaacaaaagaggaaattagttgacatttaagaatttgagatttaggaatttg 131  Q
    ||||||| ||||||||||||||||||||| ||  ||||   ||||||||| ||||||||||||||||||||||    
T  30970360 tttaatgcaagatttgattttgaacaaaatagagaattgtatgacatttaggaatttgagatttaggaatttg 30970288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 118 - 208
Target Start/End: Original strand, 28590985 - 28591076
Alignment:
Q  118 gatttaggaatttgaaattcaatttgaggatattga-ttttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    |||||| |||||||| |||||||||| | ||||||| |||| | ||| ||||||||| ||| ||||||||| ||||||||| ||||||||||    
T  28590985 gatttaagaatttgatattcaatttgggaatattgattttttggttcagggaccaaagtgaccattttctactttcactttggtccctgtga 28591076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 208
Target Start/End: Complemental strand, 544898 - 544808
Alignment:
Q  118 gatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    ||||||||||||||| |||||||||| | ||||||||||| | ||| || ||| ||||||  |||||||| |||||||||  |||||||||    
T  544898 gatttaggaatttgatattcaatttgggaatattgatttttggttcaggaacccaaatgactattttctactttcactttgatccctgtga 544808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 68 - 202
Target Start/End: Original strand, 2466588 - 2466730
Alignment:
Q  68 agatttgattttgaacaaaagaggaaattagttgacatttaagaatttgagatttagg--------aatttgaaattcaatttgaggatattgattttcg 159  Q
    |||||| ||||||||||||| ||  |||||| ||||||||| | |||||||||||| |        ||||||| |||||||||| | ||||||| ||| |    
T  2466588 agatttaattttgaacaaaaaagagaattagatgacatttagggatttgagatttaaggatttaagaatttgatattcaatttgggaatattgaattttg 2466687  T
Q  160 attcggggaccaaaatgatcattttctattttcactttagtcc 202  Q
     ||| |||||||||||||  |||||||| ||||||||| ||||    
T  2466688 gttcagggaccaaaatgactattttctactttcactttggtcc 2466730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 145 - 202
Target Start/End: Original strand, 31946933 - 31946990
Alignment:
Q  145 ggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtcc 202  Q
    ||||||||||||||||||| ||||||||| ||| |||||| || ||||||||||||||    
T  31946933 ggatattgattttcgattcagggaccaaagtgaccattttttactttcactttagtcc 31946990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 202
Target Start/End: Original strand, 578625 - 578709
Alignment:
Q  118 gatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtcc 202  Q
    ||||||| ||| ||| |||||||||  ||||||||||||||| ||| ||||||||| |||||||| | || ||||| ||||||||    
T  578625 gatttagaaatctgagattcaatttagggatattgattttcggttcagggaccaaagtgatcattctttactttcattttagtcc 578709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 204
Target Start/End: Complemental strand, 14890085 - 14889933
Alignment:
Q  59 tttaatgaaagatttgattttgaacaaaagaggaaattagttgacatttaagaatttgagatttaggaattt--------gaaattcaatttgaggatat 150  Q
    ||||||| |||||| ||||||||||||||||   || ||| ||||||||||| |||| ||||||||| ||||        || |||||||||| | ||||    
T  14890085 tttaatggaagatt-gattttgaacaaaagaaataactagatgacatttaaggatttaagatttagggatttagcgaattgatattcaatttgggcatat 14889987  T
Q  151 tgattttcgattcggggaccaaaatgatcattttctattttcactttagtccct 204  Q
    ||||||| | ||| ||||||||| ||| ||||||||| ||| ||||| ||||||    
T  14889986 tgatttttggttcagggaccaaagtgaccattttctacttttactttggtccct 14889933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 208
Target Start/End: Original strand, 40612518 - 40612622
Alignment:
Q  104 atttaagaatttgagatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccc 203  Q
    |||||||| || | |||||||| |||||  |||||||||| | ||||||||||| | ||| ||||||||| | | ||||||||| ||||||||| ||||     
T  40612518 atttaagatttagggatttagggatttgttattcaatttgggcatattgatttttggttcagggaccaaagtaaccattttctactttcactttggtcct 40612617  T
Q  204 tgtga 208  Q
    |||||    
T  40612618 tgtga 40612622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 13651041 - 13651104
Alignment:
Q  145 ggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    ||||||||||||||| ||| ||||| ||| ||| |||||| || ||||||||||||||||||||    
T  13651041 ggatattgattttcggttcagggactaaagtgaccattttttactttcactttagtccctgtga 13651104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 578090 - 578030
Alignment:
Q  118 gatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgat 178  Q
    ||||||| ||||||| || ||||||||| |||||||||||||||||  |||||||| ||||    
T  578090 gatttagaaatttgagatccaatttgagaatattgattttcgattctaggaccaaattgat 578030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 25590575 - 25590519
Alignment:
Q  243 cacaccatcacttaacaaaattatttaacaccagggattaaagtgataacaaaagtg 299  Q
    |||| ||||||||||||||||| ||||||  ||| |||||||||||||||| |||||    
T  25590575 cacatcatcacttaacaaaattttttaacgtcagagattaaagtgataacagaagtg 25590519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 204
Target Start/End: Complemental strand, 28589951 - 28589863
Alignment:
Q  116 gagatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccct 204  Q
    |||||||||  |||||| |||||||||  | ||||||||||| | ||| ||||||||| ||| ||||||||| ||| ||||| ||||||    
T  28589951 gagatttagtgatttgatattcaattttggtatattgatttttggttcagggaccaaagtgaccattttctacttttactttggtccct 28589863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 130
Target Start/End: Original strand, 9537862 - 9537932
Alignment:
Q  59 tttaatgaaagatttgattttgaacaaaagaggaaattagttgacatttaagaatttgagatttaggaattt 130  Q
    ||||||| |||||| ||||||||||||| |||  |||||| | ||||||| |||||||||||||||| ||||    
T  9537862 tttaatggaagatt-gattttgaacaaaggagagaattagataacatttaggaatttgagatttagggattt 9537932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 19183188 - 19183127
Alignment:
Q  141 ttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtcc 202  Q
    ||||||||||||||||||||||| | || |||| | | |||||| || ||||||||||||||    
T  19183188 ttgaggatattgattttcgattcagagagcaaagtcaccattttttactttcactttagtcc 19183127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 2e-32; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 145 - 328
Target Start/End: Complemental strand, 8975402 - 8975219
Alignment:
Q  145 ggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgtca 244  Q
    ||||||||||||| | ||  ||||||||| ||| ||||||||| |||||||||||||||||||| |  ||| ||| ||| || |||||||||||||||||    
T  8975402 ggatattgatttttggtttcgggaccaaagtgaccattttctactttcactttagtccctgtgacatctcatactccttgtcggcataaaacatttgtca 8975303  T
Q  245 caccatcacttaacaaaattatttaacaccagggattaaagtgataacaaaagtgtacattcaaatattactttatatttaatc 328  Q
     | ||||| |||||||||||||||||| |||  || |||||||||||| |||||| | |||||   | ||||||||||||||||    
T  8975302 tatcatcaattaacaaaattatttaacgccaaagactaaagtgataacgaaagtgcatattcatggactactttatatttaatc 8975219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 75 - 290
Target Start/End: Original strand, 34088279 - 34088494
Alignment:
Q  75 attttgaacaaaagaggaaattagttgacatttaagaatttgagatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaa 174  Q
    ||||||||||||||||  |||||| | ||||||||  |||||||||||||| ||||||||||||||||| ||||||||| |||   ||| |||||||||     
T  34088279 attttgaacaaaagagagaattagataacatttaatgatttgagatttagggatttgaaattcaatttggggatattgaatttttgttcagggaccaaag 34088378  T
Q  175 tgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgtcacaccatcacttaacaaaattatttaacacc 274  Q
    |||    |||||| |||||||||||||||| ||| || ||| |  || | ||| | |||||||| |||| || |||||||||||| ||||||||||   |    
T  34088379 tgacacatttctactttcactttagtccctatgacacatcaaatgtcatgtcatcgtaaaacatgtgtcgcatcatcacttaacataattatttaatgtc 34088478  T
Q  275 agggattaaagtgata 290  Q
    | ||||||||||||||    
T  34088479 aaggattaaagtgata 34088494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 72 - 208
Target Start/End: Original strand, 32665596 - 32665733
Alignment:
Q  72 ttgattttgaacaaaagaggaaattagttgacatttaagaatttgagatttaggaatttgaaattcaatttgaggatattgattttcg-attcggggacc 170  Q
    |||||||||||||||| ||  |||||| ||||||||||| |||| ||||||||| |||||| |||||||||| ||||||||||||| |  ||| ||||||    
T  32665596 ttgattttgaacaaaaaagataattagatgacatttaaggatttaagatttagggatttgatattcaatttggggatattgatttttgtgttcagggacc 32665695  T
Q  171 aaaatgatcattttctattttcactttagtccctgtga 208  Q
    ||| ||| ||||||||| ||||||||| |||| |||||    
T  32665696 aaagtgaccattttctactttcactttggtccttgtga 32665733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 93 - 208
Target Start/End: Complemental strand, 9339921 - 9339806
Alignment:
Q  93 aattagttgacatttaagaatttgagatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttc 192  Q
    |||||| ||||||||||| |||| ||||||||| |||||| |||||||||| ||||||||||||| | ||| | ||||||| ||| ||||||||| ||||    
T  9339921 aattagatgacatttaaggatttaagatttagggatttgatattcaatttggggatattgatttttggttcagagaccaaagtgaccattttctactttc 9339822  T
Q  193 actttagtccctgtga 208  Q
    ||||| ||||||||||    
T  9339821 actttggtccctgtga 9339806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 145 - 304
Target Start/End: Complemental strand, 29766166 - 29766007
Alignment:
Q  145 ggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgtca 244  Q
    |||||||||||||   ||| ||||||||| |||  |||||||||||||||||||||  || ||| || ||| |||  || |||||||||||||||||| |    
T  29766166 ggatattgattttttgttcagggaccaaagtgacaattttctattttcactttagtaactatgacacctcatactatttgtcagcataaaacatttgtta 29766067  T
Q  245 caccatcacttaacaaaattatttaacaccagggattaaagtgataacaaaagtgtacat 304  Q
    || ||||| |||||||||||||||||||| |  || ||||||||||||| ||||| ||||    
T  29766066 catcatcaattaacaaaattatttaacactatagactaaagtgataacagaagtgcacat 29766007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 59 - 291
Target Start/End: Complemental strand, 6612746 - 6612516
Alignment:
Q  59 tttaatgaaagatttgattttgaacaaaagaggaaattagttgacatttaagaatttgagatttaggaattt--------gaaattcaatttgaggatat 150  Q
    ||||||| |||||| |||||| ||||||| ||  |||||| ||||||||| | |||||||||||||||||||        || |||||||||| ||||||    
T  6612746 tttaatggaagatt-gattttaaacaaaaaagagaattagatgacatttagggatttgagatttaggaatttagggatttgagattcaatttggggatat 6612648  T
Q  151 tgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgtcacaccat 250  Q
    ||||||| | |||  |||| ||| ||||||||||||| ||| | |||||||||||||| || ||| | | ||| ||||||         |||||||  ||    
T  6612647 tgatttttggttcaaggacaaaagtgatcattttctactttgaatttagtccctgtgacacctcatattccttgtcagca---------tgtcacataat 6612557  T
Q  251 cacttaacaaaattatttaacaccagggattaaagtgataa 291  Q
    |||||||||||||||||||||  ||||||||||||||||||    
T  6612556 cacttaacaaaattatttaacgtcagggattaaagtgataa 6612516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 119 - 271
Target Start/End: Complemental strand, 3117918 - 3117766
Alignment:
Q  119 atttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacac 218  Q
    ||||||| |||||| |||||||||| ||||||| ||||| | |||  |||| ||||||||||||||||| |||||||||||||  ||||| || ||| |     
T  3117918 atttagggatttgatattcaatttggggatattaatttttggttcaaggactaaaatgatcattttctactttcactttagtcattgtgacacctcatat 3117819  T
Q  219 ttcttctcagcataaaacatttgtcacaccatcacttaacaaaattatttaac 271  Q
     || |  || | |||||||| ||||||| ||||| ||||||||||||||||||    
T  3117818 gtcatgccatcgtaaaacatgtgtcacatcatcaattaacaaaattatttaac 3117766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 140 - 330
Target Start/End: Original strand, 50107078 - 50107268
Alignment:
Q  140 tttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatt 239  Q
    |||| ||||||| ||||||| ||   |||||||| ||| ||| | ||| |||||| ||||||| ||||| || ||| ||| ||| |||||||||||| ||    
T  50107078 tttggggatattaattttcggttaaaggaccaaagtgaccatgtcctactttcacgttagtccatgtgacacctcatactccttgtcagcataaaacctt 50107177  T
Q  240 tgtcacaccatcacttaacaaaattatttaacaccagggattaaagtgataacaaaagtgtacattcaaatattactttatatttaatcct 330  Q
    |||||   ||||| |||||| ||||||||||| ||| ||| ||||||||||||  ||||| ||||||| | | || ||| |||||||||||    
T  50107178 tgtcatgtcatcagttaacataattatttaacgccaaggactaaagtgataacggaagtgcacattcagagactattttgtatttaatcct 50107268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 59 - 208
Target Start/End: Complemental strand, 52439777 - 52439621
Alignment:
Q  59 tttaatgaaagatttgattttgaacaaaagaggaaattagttgacatttaagaatttga--------gatttaggaatttgaaattcaatttgaggatat 150  Q
    ||||||| |||||| |||||||||||||| ||  |||||| ||||||||||| |||| |        ||||||||||||||| |||||||||||||||||    
T  52439777 tttaatggaagatt-gattttgaacaaaaaagataattagatgacatttaaggatttaaaatttagggatttaggaatttgatattcaatttgaggatat 52439679  T
Q  151 tgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    ||||||| | ||  |||| |||| ||| ||||||||| ||||||||| |||| |||||    
T  52439678 tgatttttggtttagggatcaaagtgaccattttctactttcactttggtccttgtga 52439621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 9340862 - 9340988
Alignment:
Q  75 attttgaacaaaagaggaaattagttgacatttaagaatttgagatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaa 174  Q
    |||||||||||||||| ||||||| ||||||||| |       ||||||||||||||| ||||| |||| | ||||||| ||| | ||| |||||||||     
T  9340862 attttgaacaaaagagaaaattagatgacatttagg-------gatttaggaatttgatattcattttgggaatattgaattttggttcagggaccaaag 9340954  T
Q  175 tgatcattttctattttcactttagtccctgtga 208  Q
    ||| ||||||||| ||||||||| ||||||||||    
T  9340955 tgaccattttctactttcactttggtccctgtga 9340988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 59 - 271
Target Start/End: Complemental strand, 51450336 - 51450117
Alignment:
Q  59 tttaatgaaagatttgattttgaacaaaagaggaaattagttgacatttaagaatttgagatttagga--------atttgaaattcaatttgaggatat 150  Q
    ||||||| |||||| |||||||||||||||||  |||||| ||||| ||| | ||||||||||||| |        |||||| |||||| ||| ||||||    
T  51450336 tttaatggaagatt-gattttgaacaaaagagataattagatgacacttacggatttgagatttagaaattttgagatttgagattcaagttggggatat 51450238  T
Q  151 tgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgtcacaccat 250  Q
    | ||||| | |||  |||| | | ||||||||||||| ||||| |||||||||||||| || ||| |   | | ||| | |||||||| ||||||| ||     
T  51450237 ttatttttggttcatggactatagtgatcattttctactttcagtttagtccctgtgacacctcatatgacatgtcatcgtaaaacatgtgtcacatcac 51450138  T
Q  251 cacttaacaaaattatttaac 271  Q
    |||||||||||||||||||||    
T  51450137 cacttaacaaaattatttaac 51450117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 103 - 197
Target Start/End: Complemental strand, 7944420 - 7944326
Alignment:
Q  103 catttaagaatttgagatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcacttt 197  Q
    |||||||| |||| ||||||||| |||||| |||||||||| ||||||||||||| | | | ||||||||| |||| |||||||| |||||||||    
T  7944420 catttaaggatttaagatttagggatttgatattcaatttggggatattgatttttggtccagggaccaaagtgataattttctactttcacttt 7944326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 118 - 271
Target Start/End: Original strand, 6613840 - 6613984
Alignment:
Q  118 gatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcaca 217  Q
    |||||||| |||||| |||||||||| ||||||||||||| | ||| |||| |||| | || |||| ||| |||||||||||||||||||| ||  || |    
T  6613840 gatttagggatttgagattcaatttggggatattgatttttggttcagggaacaaagtaataatttcctactttcactttagtccctgtgaaaccccata 6613939  T
Q  218 cttcttctcagcataaaacatttgtcacaccatcacttaacaaaattatttaac 271  Q
    || ||| ||||||         ||||||| ||||||||||||||||||||||||    
T  6613940 ctgcttgtcagca---------tgtcacatcatcacttaacaaaattatttaac 6613984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 70 - 198
Target Start/End: Complemental strand, 26518412 - 26518279
Alignment:
Q  70 atttgattttgaacaaaagaggaaattagttgacatttaag-----aatttgagatttaggaatttgaaattcaatttgaggatattgattttcgattcg 164  Q
    |||||||||||||||||||||| |||||| ||| ||||| |     |||| | ||||||||||||||| ||||||||||  ||||||| |||||| |||     
T  26518412 atttgattttgaacaaaagagggaattagatgagatttagggattaaattcgggatttaggaatttgagattcaatttggagatattggttttcggttca 26518313  T
Q  165 gggaccaaaatgatcattttctattttcacttta 198  Q
    | ||||||| ||| |||||||||  |||||||||    
T  26518312 gagaccaaagtgaccattttctaccttcacttta 26518279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 34085790 - 34085706
Alignment:
Q  120 tttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccct 204  Q
    |||||||||||||||||||||||| ||||||||||||| | |||  | | |||| ||||||||||||| ||||| ||||||||||    
T  34085790 tttaggaatttgaaattcaatttggggatattgatttttggttcaagcatcaaagtgatcattttctactttcattttagtccct 34085706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 208
Target Start/End: Original strand, 534424 - 534491
Alignment:
Q  141 ttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    |||||||||||||||||||||||| ||| |||| |||||||||| || ||||||||||||||| ||||    
T  534424 ttgaggatattgattttcgattcgtggatcaaagtgatcattttttactttcactttagtccccgtga 534491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 117 - 204
Target Start/End: Complemental strand, 16249914 - 16249827
Alignment:
Q  117 agatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccct 204  Q
    ||||||||| |||| | |||||||||  ||||||||||||||| ||| ||||| ||||||| ||||||||| ||||||||||| ||||    
T  16249914 agatttagggatttaagattcaatttagggatattgattttcggttcagggactaaaatgaccattttctactttcactttagcccct 16249827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 208
Target Start/End: Complemental strand, 11830158 - 11830069
Alignment:
Q  119 atttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    ||||| |||||||| ||||||||| |||||||||||||| | |||  ||| |||||||| ||||||||| |||||||||| ||| |||||    
T  11830158 atttaagaatttgagattcaattttaggatattgatttttggttctaggatcaaaatgaccattttctactttcactttaatccatgtga 11830069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 25038149 - 25038069
Alignment:
Q  120 tttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagt 200  Q
    |||||| |||||| |||||||||  ||||||||||||| | ||| ||||||||| |||| |||||||| ||||||||||||    
T  25038149 tttagggatttgagattcaatttagggatattgatttttggttcagggaccaaagtgataattttctactttcactttagt 25038069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 25043361 - 25043281
Alignment:
Q  120 tttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagt 200  Q
    |||||| |||||| |||||||||  ||||||||||||| | ||| ||||||||| |||| |||||||| ||||||||||||    
T  25043361 tttagggatttgagattcaatttagggatattgatttttggttcagggaccaaagtgataattttctactttcactttagt 25043281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 204 - 292
Target Start/End: Complemental strand, 33342600 - 33342512
Alignment:
Q  204 tgtgatacttcacacttcttctcagcataaaacatttgtcacaccatcacttaacaaaattatttaacaccagggattaaagtgataac 292  Q
    ||||| || ||| ||| ||| |||||||||||| ||||||||| |||||||||||| |||||||||||  ||| || ||||||||||||    
T  33342600 tgtgacacctcatactccttgtcagcataaaacttttgtcacatcatcacttaacataattatttaacgtcagagactaaagtgataac 33342512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 325
Target Start/End: Complemental strand, 1407872 - 1407703
Alignment:
Q  144 aggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgtc 243  Q
    |||||||| ||||||| |||  |||||||| |||| |||||||| |||||||||||||| ||||| || ||       || || ||||||||||          
T  1407872 aggatattaattttcggttcaaggaccaaagtgataattttctactttcactttagtccatgtgacacctct------ttgtcggcataaaaca------ 1407785  T
Q  244 acaccatcacttaacaaaattatttaacaccagggattaaagtgataacaaaagtgtacattcaaatattactttatattta 325  Q
    ||| ||||| ||||||||||||||||||  |||||| ||||||||||||| ||||| | ||||| | | |||||||||||||    
T  1407784 acatcatcagttaacaaaattatttaacgtcagggactaaagtgataacataagtgcatattcagaaactactttatattta 1407703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 22856939 - 22856865
Alignment:
Q  127 atttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtc 201  Q
    |||||| |||||||||||||||||||| ||| | ||| || || ||| ||||||||||||| |||||||||||||    
T  22856939 atttgagattcaatttgaggatattgaattttggttcaggaactaaagtgatcattttctactttcactttagtc 22856865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 208
Target Start/End: Original strand, 52440367 - 52440523
Alignment:
Q  59 tttaatgaaagatttgattttgaacaaaagaggaaattagttgacatttaagaatttgagatt--------taggaatttgaaattcaatttgaggatat 150  Q
    ||||||||||||||  ||||| ||||||||||  |||||| ||||||||| | ||||||||||        ||||||||||| |||||||||| | |||     
T  52440367 tttaatgaaagatta-attttaaacaaaagagagaattagatgacatttagggatttgagatttaaggatttaggaatttgatattcaatttgggaatac 52440465  T
Q  151 tgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    | ||||| | ||| ||||||||| |||  |||||||| ||||||||| | ||||||||    
T  52440466 ttatttttggttcagggaccaaagtgactattttctactttcactttggcccctgtga 52440523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 299
Target Start/End: Original strand, 11060665 - 11060818
Alignment:
Q  145 ggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgtca 244  Q
    ||||||||||||||  ||| |||| |||| |||  |||||||| |||||||||||||  ||||| || ||| ||  ||| |||| ||||||| |||  ||    
T  11060665 ggatattgattttctgttcagggatcaaagtgacaattttctactttcactttagtcattgtga-acctcataccccttgtcagaataaaaccttttcca 11060763  T
Q  245 caccatcacttaacaaaattatttaacaccagggattaaagtgataacaaaagtg 299  Q
    |  ||||| |||||| |||||||||||  | |||| |||||||||||| ||||||    
T  11060764 cgtcatcagttaacagaattatttaacgtcggggactaaagtgataacgaaagtg 11060818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 292
Target Start/End: Original strand, 22857496 - 22857606
Alignment:
Q  182 tttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgtcacaccatcacttaacaaaattatttaacaccagggatt 281  Q
    |||||| |||||||||||||| ||||| || ||| |  || | |||  ||||||| | ||||||| |||||||||||| |||||||||||  || ||| |    
T  22857496 tttctactttcactttagtccatgtgacacctcatatgtcatgtcattataaaacttgtgtcacatcatcacttaacataattatttaacgtcatggact 22857595  T
Q  282 aaagtgataac 292  Q
    |||||||||||    
T  22857596 aaagtgataac 22857606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 340
Target Start/End: Original strand, 39726540 - 39726761
Alignment:
Q  118 gatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcaca 217  Q
    |||||||| ||||| |||||||||||  |||||||||||| | ||| ||| | |||||||  |||||||| |||||||||||||  | |||||| ||  |    
T  39726540 gatttagggatttggaattcaatttggtgatattgatttttggttcaggg-ctaaaatgactattttctactttcactttagtctatatgatacctcgta 39726638  T
Q  218 cttcttctcagcataaaacatttgtcacaccatcacttaacaaaattatttaacaccagggattaaagtgataacaaaagtgtacattcaaatattactt 317  Q
    |  ||| |||||  |||||| |||||||  ||||| ||||||||| | || |||  ||  || |||| ||||||   || || || |||| | | |||||    
T  39726639 caccttgtcagctcaaaacacttgtcacctcatcaattaacaaaaattttcaacgtcaaagactaaactgataaacgaaatgcactttcagagactactt 39726738  T
Q  318 tatatttaatcctaagccaaaga 340  Q
    |||||||||||||||| ||||||    
T  39726739 tatatttaatcctaagtcaaaga 39726761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 347
Target Start/End: Complemental strand, 44719593 - 44719391
Alignment:
Q  145 ggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgtca 244  Q
    ||||||||||||||  ||| |||| |||| |||  |||||||| ||||| |||||| | ||||| || |   ||  ||| | |||||||||| |||| ||    
T  44719593 ggatattgattttcagttcagggagcaaagtgacaattttctactttcattttagttcatgtgacacattgtaccccttgttagcataaaacctttgcca 44719494  T
Q  245 caccatcacttaacaaaattatttaacaccagggattaaagtgataacaaaagtgtacattcaaatattactttatatttaatcctaagccaaagatctt 344  Q
    || ||||| | |||||||||||||||   ||| || |||| |||||||  ||||| | ||||| | | |||||||||||||||||| ||  | |||||||    
T  44719493 caacatcaatgaacaaaattatttaaagacagagactaaaatgataacggaagtgcatattcataaactactttatatttaatcctgagttagagatctt 44719394  T
Q  345 tgt 347  Q
    |||    
T  44719393 tgt 44719391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 266 - 326
Target Start/End: Original strand, 26519103 - 26519163
Alignment:
Q  266 tttaacaccagggattaaagtgataacaaaagtgtacattcaaatattactttatatttaa 326  Q
    |||||| |||| ||||||| |||||||||||||| ||||||||| | |||||| |||||||    
T  26519103 tttaacgccagagattaaactgataacaaaagtgcacattcaaagactactttgtatttaa 26519163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 51453592 - 51453647
Alignment:
Q  118 gatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaa 173  Q
    |||||||| ||||||||||||||||| ||||||||||||  ||||| |||| ||||    
T  51453592 gatttagggatttgaaattcaatttgcggatattgatttatgattcagggatcaaa 51453647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 118 - 204
Target Start/End: Complemental strand, 32664752 - 32664667
Alignment:
Q  118 gatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccct 204  Q
    ||||||||||||||| |||||||||| | ||||||||||| |||||   ||||||| |||  |||||||| ||||| ||| ||||||    
T  32664752 gatttaggaatttgatattcaatttgggaatattgatttttgattc-aagaccaaagtgactattttctactttcattttggtccct 32664667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 208
Target Start/End: Complemental strand, 39977586 - 39977512
Alignment:
Q  134 attcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    |||||||||||||||||||||||| | ||| | ||||||| | |||||||||||  |  |||||||||| |||||    
T  39977586 attcaatttgaggatattgatttttggttcagagaccaaagttatcattttctacatctactttagtccttgtga 39977512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 1e-31; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 59 - 301
Target Start/End: Original strand, 20599701 - 20599942
Alignment:
Q  59 tttaatgaaagatttgattttgaacaaaagaggaaattagttgacatttaagaatttgagatttaggaatttgaaattcaatttgaggatattgattttc 158  Q
    ||||||| |||||| |||||||||||||||||  |||||| |||||||||   ||||| ||||||||||||||| |||||||||| | ||||| |||||     
T  20599701 tttaatggaagatt-gattttgaacaaaagagagaattagatgacatttagagatttgcgatttaggaatttgagattcaatttgggaatattaattttt 20599799  T
Q  159 gattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgtcacaccatcacttaac 258  Q
    | ||| ||||||||| ||| |||||| || ||||| |||||||||||||| || ||| |  || | |||    | ||| | ||||||| |||||||||||    
T  20599800 ggttcagggaccaaagtgaccattttttactttcattttagtccctgtgacacctcatatgtcatgtcattgcataacctatgtcacatcatcacttaac 20599899  T
Q  259 aaaattatttaacaccagggattaaagtgataacaaaagtgta 301  Q
    | |||||||||| | | |||| |||||||||||| ||||||||    
T  20599900 ataattatttaatatcggggactaaagtgataaccaaagtgta 20599942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 59 - 208
Target Start/End: Complemental strand, 42278356 - 42278209
Alignment:
Q  59 tttaatgaaagatttgattttgaacaaaagaggaaattagttgacatttaagaatttgagatttaggaatttgaaattcaatttgaggatattgattttc 158  Q
    ||||||| ||||||| ||||||||||||| || | ||||| ||||| ||||| |||| ||||||||| |||||| |||||||||| |||||||||||||     
T  42278356 tttaatggaagattt-attttgaacaaaaaag-atattagatgacagttaaggatttaagatttagggatttgatattcaatttggggatattgattttt 42278259  T
Q  159 gattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    | ||| ||||||||| ||| ||||||||| ||||||||| ||||||||||    
T  42278258 ggttcagggaccaaagtgaccattttctagtttcactttggtccctgtga 42278209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 59 - 208
Target Start/End: Complemental strand, 47874872 - 47874723
Alignment:
Q  59 tttaatgaaagatttgattttgaacaaaagagga-aattagttgacatttaagaatttgagatttaggaatttgaaattcaatttgaggatattgatttt 157  Q
    ||||||| |||||| |||||||||||||| | || |||||  ||||||||||| |||| ||||||||| |||||| |||||||||  |||||||||||||    
T  47874872 tttaatggaagatt-gattttgaacaaaaaaagataattatatgacatttaaggatttaagatttagggatttgatattcaattttgggatattgatttt 47874774  T
Q  158 cgattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
     | |||  |||||||| ||| |||||| || ||||||||| ||||||||||    
T  47874773 tggttcaaggaccaaagtgaccattttatactttcactttggtccctgtga 47874723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 117 - 291
Target Start/End: Complemental strand, 26170914 - 26170737
Alignment:
Q  117 agatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaat---gatcattttctattttcactttagtccctgtgatactt 213  Q
    ||||||||| |||| |||||||||||| | ||||||||||||| ||| |||| |||| |   ||||||||| ||   ||| |||| ||||  ||  || |    
T  26170914 agatttagggatttcaaattcaatttgggaatattgattttcggttcagggatcaaagtagtgatcattttttacagtcattttaatccccctggcacct 26170815  T
Q  214 cacacttcttctcagcataaaacatttgtcacaccatcacttaacaaaattatttaacaccagggattaaagtgataa 291  Q
    || ||| ||| |||||||||||||| ||||||| ||||||||||||||||| ||||||| || ||| |||||||||||    
T  26170814 catactccttgtcagcataaaacatgtgtcacatcatcacttaacaaaattttttaacagcatggactaaagtgataa 26170737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 145 - 330
Target Start/End: Complemental strand, 21622066 - 21621881
Alignment:
Q  145 ggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgtca 244  Q
    |||||||| |||| | ||| || | |||| ||| |||||| || |||||||||||| | ||||| || ||| ||| ||  ||||| |||||  |||||||    
T  21622066 ggatattggtttttggttcaggaatcaaagtgaccattttatactttcactttagtgcttgtgacacatcatactcctcgtcagcgtaaaatctttgtca 21621967  T
Q  245 caccatcacttaacaaaattatttaacaccagggattaaagtgataacaaaagtgtacattcaaatattactttatatttaatcct 330  Q
    || ||||| |||||| |||||||||||| |||||| ||||||||||||  ||||| ||||||||  | || ||| |||||||||||    
T  21621966 catcatcagttaacataattatttaacatcagggactaaagtgataacggaagtgcacattcaatgactattttgtatttaatcct 21621881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 143 - 330
Target Start/End: Original strand, 21622995 - 21623182
Alignment:
Q  143 gaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgt 242  Q
    ||||| ||||||||||| |||   || |||| ||| ||||||||| ||||| ||||||| |||||| || ||| ||| ||| |||| ||||||| | ||     
T  21622995 gaggagattgattttcggttcatagagcaaagtgaccattttctactttcattttagtctctgtgacacctcatactccttgtcagtataaaacttgtgc 21623094  T
Q  243 cacaccatcacttaacaaaattatttaacaccagggattaaagtgataacaaaagtgtacattcaaatattactttatatttaatcct 330  Q
    |||| ||| | |||||| |||||||||||  | |||| ||||||||||||| ||||| ||||||||  | || ||| |||||||||||    
T  21623095 cacatcattagttaacataattatttaacgtcggggactaaagtgataacagaagtgcacattcaaggactattttgtatttaatcct 21623182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 145 - 331
Target Start/End: Original strand, 24745955 - 24746141
Alignment:
Q  145 ggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgtca 244  Q
    ||||||| |||| || ||| ||||||||| |||| ||||||||||||||||||||||  ||||| || |||  ||  ||  ||||||||||| |||||||    
T  24745955 ggatattaatttccggttcagggaccaaagtgataattttctattttcactttagtctgtgtgacacctcattctcttttccagcataaaacttttgtca 24746054  T
Q  245 caccatcacttaacaaaattatttaacaccagggattaaagtgataacaaaagtgtacattcaaatattactttatatttaatccta 331  Q
    ||   | | |||| |||||||||||||  |  ||||||||||||||||  ||||| ||||| ||  | |||||| ||||||||||||    
T  24746055 cattgtgagttaataaaattatttaacgtcgtggattaaagtgataacggaagtgcacatttaaggagtactttgtatttaatccta 24746141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 180 - 330
Target Start/End: Original strand, 32244603 - 32244753
Alignment:
Q  180 attttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgtcacaccatcacttaacaaaattatttaacaccaggga 279  Q
    ||||| || ||||||||||||| |||||| || ||| ||| ||| |||||||||||  ||||||||  ||||  ||||||||||||||||||  ||||||    
T  32244603 attttttactttcactttagtcactgtgacacctcatactccttgtcagcataaaatctttgtcacgtcatcggttaacaaaattatttaacgtcaggga 32244702  T
Q  280 ttaaagtgataacaaaagtgtacattcaaatattactttatatttaatcct 330  Q
     ||||||||||||  | ||| ||||||||  | |||||| | |||||||||    
T  32244703 ctaaagtgataacggatgtgcacattcaaggactactttgtctttaatcct 32244753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 118 - 290
Target Start/End: Complemental strand, 4702033 - 4701863
Alignment:
Q  118 gatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcaca 217  Q
    |||||||  |||||| ||||||||| |||||||||| ||| | ||| ||||||||| |||  |||||||| |||||||||||||| ||||| ||||||      
T  4702033 gatttagagatttgagattcaattttaggatattgacttttgtttcagggaccaaagtgactattttctactttcactttagtccatgtgacacttcatg 4701934  T
Q  218 cttcttctcagcataaaacatttgtcacaccatcacttaacaaaattatttaacaccagggattaaagtgata 290  Q
    |  |   ||| | |||||| | ||| | | |||||||||||| |||||||||||| |||||| ||||||||||    
T  4701933 c--cacgtcatcgtaaaacttgtgtaatatcatcacttaacagaattatttaacatcagggactaaagtgata 4701863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 75 - 196
Target Start/End: Complemental strand, 54574726 - 54574597
Alignment:
Q  75 attttgaacaaaagaggaaattagttgacatttaagaatttgagattta--------ggaatttgaaattcaatttgaggatattgattttcgattcggg 166  Q
    ||||||||| ||||||  |||||| ||||||||| | ||||||||||||        ||||||||| |||||||||||| || |||||||| | ||||||    
T  54574726 attttgaactaaagagagaattagatgacatttagggatttgagatttaaggagttaggaatttgatattcaatttgagaattttgatttttggttcggg 54574627  T
Q  167 gaccaaaatgatcattttctattttcactt 196  Q
    || |||| ||||||||||||| ||||||||    
T  54574626 gatcaaagtgatcattttctactttcactt 54574597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 119 - 292
Target Start/End: Complemental strand, 19050505 - 19050334
Alignment:
Q  119 atttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacac 218  Q
    ||||||| |||||| |||||||||  ||||||||||||| | |||  |||||||| |||||||||| || |||||||||||||| ||||| || ||| |     
T  19050505 atttagggatttgagattcaatttagggatattgatttttgcttcaaggaccaaagtgatcattttatactttcactttagtccatgtgacacctcatat 19050406  T
Q  219 ttcttctcagcataaaacatttgtcacaccatcacttaacaaaattatttaacaccagggattaaagtgataac 292  Q
      | | ||| | |||||||  ||||||| |||||||||| | |||||||||||  | | || ||||||||||||    
T  19050405 gccatatcatcgtaaaaca--tgtcacatcatcacttaatagaattatttaacgtcggagactaaagtgataac 19050334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 327
Target Start/End: Original strand, 24753522 - 24753623
Alignment:
Q  226 cagcataaaacatttgtcacaccatcacttaacaaaattatttaacaccagggattaaagtgataacaaaagtgtacattcaaatattactttatattta 325  Q
    ||||||||||| |||| |||| ||||| |||||||||||||||||| | |  || ||||||||||||| ||||| |||||||    ||||||||||||||    
T  24753522 cagcataaaacttttgccacatcatcagttaacaaaattatttaacgcgaatgactaaagtgataacagaagtgcacattcaggagttactttatattta 24753621  T
Q  326 at 327  Q
    ||    
T  24753622 at 24753623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 204
Target Start/End: Original strand, 47878358 - 47878443
Alignment:
Q  119 atttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccct 204  Q
    |||||||||||||| |||||||||  | ||||||||||| | ||| ||||||||| ||| ||||||||| ||||||||| ||||||    
T  47878358 atttaggaatttgatattcaattttggaatattgatttttggttcagggaccaaagtgaccattttctactttcactttggtccct 47878443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 271
Target Start/End: Complemental strand, 2786465 - 2786340
Alignment:
Q  146 gatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgtcac 245  Q
    |||||||||||||| ||| | ||||||| ||| ||||||||| ||| |||||| ||| | ||| |||||| |||  || | |||||| ||  ||||||||    
T  2786465 gatattgattttcggttcagagaccaaagtgaccattttctacttttactttaatccatatgacacttcatactctttgtgagcatacaatctttgtcac 2786366  T
Q  246 accatcacttaacaaaattatttaac 271  Q
    |  |||| ||||||||||||||||||    
T  2786365 attatcagttaacaaaattatttaac 2786340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 271
Target Start/End: Complemental strand, 32244519 - 32244391
Alignment:
Q  143 gaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgt 242  Q
    ||||||||||||||||| | | | || |||| ||| |||||| || ||||||||||||| |||||| ||  || |||  || |||||||||||| || ||    
T  32244519 gaggatattgattttcggtgcagagatcaaagtgaccattttttactttcactttagtctctgtgacaccccatactctttgtcagcataaaaccttcgt 32244420  T
Q  243 cacaccatcacttaacaaaattatttaac 271  Q
    | |  |||||||||||| |||||||||||    
T  32244419 cgcgtcatcacttaacataattatttaac 32244391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 202
Target Start/End: Original strand, 4703006 - 4703154
Alignment:
Q  59 tttaatgaaagatttgattttgaacaaaagaggaaattagttgacatttaagaatttgagatttag-------ga-atttgaaattcaatttgaggatat 150  Q
    ||||||| |||||| |||||||||||||||||  |||||  ||||||||| | |||||||||||||       || |||||| |||||||||| ||||||    
T  4703006 tttaatggaagatt-gattttgaacaaaagag--aattaaatgacatttagggatttgagatttagtgattcagagatttgagattcaatttggggatat 4703102  T
Q  151 tgattttcgattcggggaccaaaatgatcattttctattttcactttagtcc 202  Q
    ||||||| |  || ||||||||| |||  ||||| || ||||||||||||||    
T  4703103 tgatttttgggtcagggaccaaagtgacaattttatactttcactttagtcc 4703154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 292
Target Start/End: Complemental strand, 39869079 - 39869016
Alignment:
Q  229 cataaaacatttgtcacaccatcacttaacaaaattatttaacaccagggattaaagtgataac 292  Q
    ||||||| || ||||||| |||||||||||| |||||||||||  ||| || ||||||||||||    
T  39869079 cataaaatatgtgtcacatcatcacttaacataattatttaacgtcagagactaaagtgataac 39869016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 261
Target Start/End: Complemental strand, 6039370 - 6039248
Alignment:
Q  139 atttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacat 238  Q
    ||||| ||||||| ||||||| ||| |||| |||| ||| |||||||||   ||||||| |||||| ||| || ||| |||  || ||||||||||| ||    
T  6039370 atttggggatattaattttcggttcagggagcaaagtgaccattttctacactcactttggtccctatgacacctcatactcattgtcagcataaaatat 6039271  T
Q  239 ttgtcacaccatcacttaacaaa 261  Q
     ||||||  ||||| ||||||||    
T  6039270 gtgtcacgtcatcatttaacaaa 6039248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 705 - 755
Target Start/End: Original strand, 20825029 - 20825079
Alignment:
Q  705 ttcctctctctaatttcatactaaaccctacactatcaactacaccttttt 755  Q
    ||||||||||||||||||||| |||| | |||| ||||||||||| |||||    
T  20825029 ttcctctctctaatttcataccaaacgccacacaatcaactacacattttt 20825079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 118 - 208
Target Start/End: Original strand, 42391759 - 42391849
Alignment:
Q  118 gatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    |||||||| |||||| | ||||||||| |||||  |||||   ||| ||||| ||| ||| ||||||||| |||||||||||||| |||||    
T  42391759 gatttagggatttgagactcaatttgaagatatgaatttttagttcagggactaaagtgaccattttctactttcactttagtccatgtga 42391849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 202
Target Start/End: Complemental strand, 38216714 - 38216632
Alignment:
Q  118 gatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtcc 202  Q
    |||||||| |||||| |||||||||  ||||||||||| ||||||| || ||||||  || |||||  || ||||||||||||||    
T  38216714 gatttagggatttgatattcaattttgggatattgattatcgattcaggaaccaaagggaccattt--tactttcactttagtcc 38216632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 208
Target Start/End: Complemental strand, 53770562 - 53770473
Alignment:
Q  119 atttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    ||||||| |||||| |||||| ||| ||||||||||||  | ||  | ||| ||| ||| ||||||||||||||| ||||||| ||||||    
T  53770562 atttagggatttgatattcaagttggggatattgatttctgctttagtgactaaagtgaccattttctattttcattttagtctctgtga 53770473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 53770944 - 53771021
Alignment:
Q  119 atttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactt 196  Q
    ||||||| |||||| |||||| ||| ||||||||||||| | ||||| ||| ||| |||  |||||||| ||||||||    
T  53770944 atttagggatttgagattcaagttggggatattgatttttggttcggagactaaagtgacaattttctactttcactt 53771021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 4e-31; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 59 - 292
Target Start/End: Original strand, 12223494 - 12223726
Alignment:
Q  59 tttaatgaaagatttgattttgaacaaaagaggaaattagttgacatttaagaatttgagatttaggaatttgaaattcaatttgaggatattgattttc 158  Q
    ||||||| |||||| |||||||||| ||||||| |||||| ||||||||| | |||||| ||||||| |||||| |||||||||| |||||||||||||     
T  12223494 tttaatggaagatt-gattttgaactaaagaggtaattagatgacatttatggatttgaaatttagggatttgagattcaatttggggatattgattttt 12223592  T
Q  159 gattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgtcacaccatcacttaac 258  Q
    | |||  ||| |||| |||  ||||| || |||||||||||| ||||||| |  ||| |  || | ||| | |||||| | ||||||| |||||||||||    
T  12223593 ggttcaaggatcaaagtgacaattttttactttcactttagttcctgtgacaactcatatgtcatgtcatcgtaaaacctgtgtcacatcatcacttaac 12223692  T
Q  259 aaaattatttaacaccagggattaaagtgataac 292  Q
    | |||||||||||| ||| || |||||| |||||    
T  12223693 agaattatttaacatcagtgactaaagtaataac 12223726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 72 - 208
Target Start/End: Complemental strand, 34707916 - 34707780
Alignment:
Q  72 ttgattttgaacaaaagaggaaattagttgacatttaagaatttgagatttaggaatttgaaattcaatttgaggatattgattttcgattcggggacca 171  Q
    |||||||||||||||||||  |||||  |||||||||||||||||||||||||| ||||||||||||| ||| ||||||| ||||| | | |  ||| ||    
T  34707916 ttgattttgaacaaaagagagaattatatgacatttaagaatttgagatttagggatttgaaattcaacttggggatattaatttttggtccatggaaca 34707817  T
Q  172 aaatgatcattttctattttcactttagtccctgtga 208  Q
    || || ||||||||||||||||||||| |||||||||    
T  34707816 aagtgttcattttctattttcactttattccctgtga 34707780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 72 - 291
Target Start/End: Original strand, 6680340 - 6680559
Alignment:
Q  72 ttgattttgaacaaaagaggaaattagttgacatttaagaatttgagatttaggaatttgaaattcaatttgaggatattgattttcgattcggggacca 171  Q
    |||||||||||||||||||  |||||| ||| ||||| | |||||||||||| |||||| |||||||||||| ||||||||||||| | ||  ||||| |    
T  6680340 ttgattttgaacaaaagagagaattagatgatatttagggatttgagatttatgaatttaaaattcaatttggggatattgatttttggtttagggacta 6680439  T
Q  172 aaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgtcacaccatcacttaacaaaattatttaac 271  Q
    ||||||  |||||||| |||||||||||||||| ||| || |||    || | ||| | |||||  | ||||||| || ||||||||| |||||||||||    
T  6680440 aaatgactattttctactttcactttagtccctttgacacatcaattgtcatgtcatcgtaaaatttatgtcacatcagcacttaacagaattatttaac 6680539  T
Q  272 accagggattaaagtgataa 291  Q
    | ||  || |||||||||||    
T  6680540 atcaaagactaaagtgataa 6680559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 73 - 208
Target Start/End: Original strand, 44334278 - 44334413
Alignment:
Q  73 tgattttgaacaaaagaggaaattagttgacatttaagaatttgagatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaa 172  Q
    ||||||||||||||||||  |||||| |||||||||||||||| ||||||||| |||||| |||||||||| ||||||||||||| | |||  |||||||    
T  44334278 tgattttgaacaaaagagataattagatgacatttaagaatttaagatttagggatttgatattcaatttggggatattgatttttggttcatggaccaa 44334377  T
Q  173 aatgatcattttctattttcactttagtccctgtga 208  Q
    | |||  |||||||| ||||||||| |||| |||||    
T  44334378 agtgactattttctactttcactttggtccatgtga 44334413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 74 - 208
Target Start/End: Complemental strand, 39708423 - 39708289
Alignment:
Q  74 gattttgaacaaaagaggaaattagttgacatttaagaatttgagatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaa 173  Q
    |||||||||||||||||  |||||| |||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||  ||| |||||    
T  39708423 gattttgaacaaaagagagaattagatgacatttaagaatttaagatttagggatttgaaattcaatttgagaatattgatttttggtttagggtccaaa 39708324  T
Q  174 atgatcattttctattttcactttagtccctgtga 208  Q
     ||| ||||||||| |||||||  ||||| |||||    
T  39708323 gtgaccattttctactttcactacagtccatgtga 39708289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 34710213 - 34710346
Alignment:
Q  75 attttgaacaaaagaggaaattagttgacatttaagaatttgagatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaa 174  Q
    ||||||||||||||||  |||||| ||||||||||| |||||| |||||||| ||| ||||||||||||||||| |||||||| ||||| |||| ||||     
T  34710213 attttgaacaaaagagagaattagatgacatttaaggatttgaaatttaggattttaaaattcaatttgaggatgttgatttttgattcagggatcaaag 34710312  T
Q  175 tgatcattttctattttcactttagtccctgtga 208  Q
    | |  ||||| || ||||||||||||| ||||||    
T  34710313 taacaattttttactttcactttagtctctgtga 34710346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 59 - 202
Target Start/End: Original strand, 35728901 - 35729043
Alignment:
Q  59 tttaatgaaagatttgattttgaacaaaagaggaaattagttgacatttaagaatttgagatttaggaatttgaaattcaatttgaggatattgattttc 158  Q
    ||||||| |||||| |||||||||||||||||  |||||| ||||||||||| |||| ||||||||| |||| | |||||||||| | |||||||||||     
T  35728901 tttaatggaagatt-gattttgaacaaaagagataattagatgacatttaaggatttaagatttagggatttaatattcaatttgggaatattgattttt 35728999  T
Q  159 gattcggggaccaaaatgatcattttctattttcactttagtcc 202  Q
    | ||| ||||||||| ||| || |||||| ||||||||| ||||    
T  35729000 ggttcagggaccaaagtgaccactttctactttcactttggtcc 35729043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 59 - 197
Target Start/End: Original strand, 30924824 - 30924961
Alignment:
Q  59 tttaatgaaagatttgattttgaacaaaagaggaaattagttgacatttaagaatttgagatttaggaatttgaaattcaatttgaggatattgattttc 158  Q
    ||||||| |||||| |||||||||||||| ||  |||||| ||||||||||| |||| ||||||||| |||||| |||||||||| |||||||||||||     
T  30924824 tttaatggaagatt-gattttgaacaaaaaagataattagatgacatttaaggatttaagatttagggatttgatattcaatttggggatattgattttt 30924922  T
Q  159 gattcggggaccaaaatgatcattttctattttcacttt 197  Q
    | |||   || |||| ||| ||||||||| |||||||||    
T  30924923 ggttcatagatcaaagtgaccattttctactttcacttt 30924961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 72 - 208
Target Start/End: Original strand, 7259512 - 7259647
Alignment:
Q  72 ttgattttgaacaaaagaggaaattagttgacatttaagaatttgagatttaggaatttgaaattcaatttgaggatattgattttcgattcggggacca 171  Q
    |||||||||| ||||| ||  ||||||  |||||||||| |||| ||||||||| |||||| |||||||||| ||||||| ||||| | ||| |||||||    
T  7259512 ttgattttgagcaaaaaagataattagaggacatttaaggatttaagatttagggatttgatattcaatttggggatattaatttttggttcagggacca 7259611  T
Q  172 aaatgatcattttctattttcactttagtccctgtga 208  Q
    || ||| ||||||||| ||||||||| |||| |||||    
T  7259612 aagtgaccattttcta-tttcactttggtccttgtga 7259647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 179 - 330
Target Start/End: Original strand, 25621635 - 25621786
Alignment:
Q  179 cattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgtcacaccatcacttaacaaaattatttaacaccaggg 278  Q
    ||||||||| |||||||||||||| ||| | |||||| ||  ||| | |||||||||  |||| || | ||||| ||||||||||||||||||  ||| |    
T  25621635 cattttctactttcactttagtccttgttacacttcataccccttgtgagcataaaatctttgccaaatcatcagttaacaaaattatttaacgtcagtg 25621734  T
Q  279 attaaagtgataacaaaagtgtacattcaaatattactttatatttaatcct 330  Q
    | ||||||||||||| ||||| ||||||||| | || ||| |||||||||||    
T  25621735 actaaagtgataacagaagtgcacattcaaaaactaatttgtatttaatcct 25621786  T

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Target: chr7; HSP #11
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 118 - 208
Target Start/End: Complemental strand, 7258525 - 7258435
Alignment:
Q  118 gatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    ||||||||||||||| |||||||||| | ||||||||||| | ||| ||||||||| ||| ||||||||| ||||||||| ||||||||||    
T  7258525 gatttaggaatttgatattcaatttgggaatattgatttttggttcagggaccaaagtgaccattttctactttcactttggtccctgtga 7258435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 145 - 347
Target Start/End: Original strand, 24288746 - 24288948
Alignment:
Q  145 ggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgtca 244  Q
    ||||||| ||||||| |||  ||| |||||| | ||||||||| ||| | |||||||| ||| | || ||| ||| ||| |||||||||||| |||||||    
T  24288746 ggatatttattttcggttcaaggatcaaaattaccattttctacttttattttagtccatgtcacacatcatactccttgtcagcataaaacctttgtca 24288845  T
Q  245 caccatcacttaacaaaattatttaacaccagggattaaagtgataacaaaagtgtacattcaaatattactttatatttaatcctaagccaaagatctt 344  Q
    || ||||| |||||| |||||| |||| |||| || |||||||||||   ||||| ||||||||  | |||||| || |||||||| ||  | |||||||    
T  24288846 catcatcagttaacagaattatataacgccagagaataaagtgataatggaagtgcacattcaaggactactttgtaattaatcctgagttagagatctt 24288945  T
Q  345 tgt 347  Q
    |||    
T  24288946 tgt 24288948  T

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Target: chr7; HSP #13
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 20 - 170
Target Start/End: Complemental strand, 45583940 - 45583792
Alignment:
Q  20 taagtatgtatagtgagggacctagcaacaagttgttgttttaatgaaagatttgattttgaacaaaagaggaaattagttgacatttaagaatttgaga 119  Q
    |||||||| ||||| ||||||||| ||  |||||| ||||| |||| |||||| |||||||| ||||| ||  |||||| ||||||| ||| |||| |||    
T  45583940 taagtatgcatagtcagggacctaacagtaagttggtgttt-aatggaagatt-gattttgatcaaaaaagataattagatgacattaaaggatttaaga 45583843  T
Q  120 tttaggaatttgaaattcaatttgaggatattgattttcgattcggggacc 170  Q
    |||||| |||||| |||||||||| ||||||||||||| | ||| ||||||    
T  45583842 tttagggatttgatattcaatttggggatattgatttttggttcagggacc 45583792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 127 - 292
Target Start/End: Complemental strand, 32793432 - 32793267
Alignment:
Q  127 atttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctc 226  Q
    |||||| ||||| |||  ||||||| ||||| ||||| |||||||||||||||||||| || |||||||||||||| ||||| || |||||  || | ||    
T  32793432 atttgagattcattttagggatattcatttttgattcagggaccaaaatgatcattttttactttcactttagtccatgtgacacctcacatgtcatgtc 32793333  T
Q  227 agcataaaacatttgtcacaccatcacttaacaaaattatttaacaccagggattaaagtgataac 292  Q
    |   |||||| | || |||| ||||| |||||| ||||||||||| |||  || ||||||||||||    
T  32793332 attgtaaaacgtgtgccacatcatcagttaacataattatttaacgccaaagactaaagtgataac 32793267  T

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Target: chr7; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 59 - 201
Target Start/End: Original strand, 5929924 - 5930065
Alignment:
Q  59 tttaatgaaagatttgattttgaacaaaagaggaaattagttgacatttaagaatttgagatttaggaatttgaaattcaatttgaggatattgattttc 158  Q
    |||||||||||| | |||||||||  ||||||  |||||  ||||||||| | |||||||||||||  |||||| |||||||||| | |||||||||||     
T  5929924 tttaatgaaagact-gattttgaatgaaagagagaattaaatgacatttatggatttgagatttagagatttgagattcaatttgggaatattgattttt 5930022  T
Q  159 gattcggggaccaaaatgatcattttctattttcactttagtc 201  Q
    ||| | |||| |||| ||||||||||  | |||||||||||||    
T  5930023 gatccagggatcaaagtgatcatttttaactttcactttagtc 5930065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 118 - 208
Target Start/End: Complemental strand, 44333387 - 44333297
Alignment:
Q  118 gatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    ||||||||||||||| |||||||||| | ||||||||||| | ||| ||||||||| ||| ||||||||| |||||| || ||||||||||    
T  44333387 gatttaggaatttgatattcaatttgggaatattgatttttggttcagggaccaaagtgaccattttctactttcacgttggtccctgtga 44333297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 119 - 208
Target Start/End: Original strand, 48788546 - 48788635
Alignment:
Q  119 atttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    |||||||||||||| |||||||||| | ||||||||||| | ||| ||||||||| ||| ||||||||| ||||||||| |||| |||||    
T  48788546 atttaggaatttgatattcaatttgtgaatattgatttttggttcagggaccaaagtgaccattttctactttcactttggtccttgtga 48788635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 132 - 208
Target Start/End: Original strand, 8048651 - 8048727
Alignment:
Q  132 aaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    |||||||||||| ||||||| ||||||| ||| ||||||||| ||| ||||||||| |||||||||||||| |||||    
T  8048651 aaattcaatttgtggatattaattttcggttcagggaccaaagtgaccattttctactttcactttagtccatgtga 8048727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 20 - 208
Target Start/End: Original strand, 10898843 - 10899036
Alignment:
Q  20 taagtatgtatagtgagggacctagcaacaagttgttgttttaatgaaagatttgattttgaacaaaagaggaaattagttgacatttaagaatttgaga 119  Q
    |||||||| ||||| ||||||||| ||  |||||||   ||||||| ||||||  |||||||||||| |||  |||||| ||||||||| | ||||||||    
T  10898843 taagtatgcatagtcagggacctaacagtaagttgtg--tttaatggaagatta-attttgaacaaatgagagaattagatgacatttagggatttgaga 10898939  T
Q  120 t--------ttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    |        |||||||||||| |||||||||| | ||||||||||| | |||  |||||||| ||| ||||||||| |||| |||| ||||||||||    
T  10898940 tgtaagaatttaggaatttgatattcaatttgggaatattgatttttggttcaaggaccaaagtgaccattttctactttctctttggtccctgtga 10899036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 75 - 208
Target Start/End: Complemental strand, 42477681 - 42477540
Alignment:
Q  75 attttgaacaaaagaggaaattagttgacatttaagaatttgagattta--------ggaatttgaaattcaatttgaggatattgattttcgattcggg 166  Q
    ||||||||||||||||  |||||| ||||||||| | ||||||||||||        ||||||||| ||||||| || | |||||  |||| | ||| ||    
T  42477681 attttgaacaaaagagagaattagatgacatttagggatttgagatttaagtatttaggaatttgatattcaatatgggaatattagtttttggttcagg 42477582  T
Q  167 gaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    ||||||| ||||||||||||| ||||||||| ||||||||||    
T  42477581 gaccaaagtgatcattttctactttcactttggtccctgtga 42477540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 134 - 292
Target Start/End: Original strand, 19433804 - 19433961
Alignment:
Q  134 attcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataa 233  Q
    |||||||||| |||||||||||||   ||| || |||||||||| |||||||||  ||||||||||||||| | | || ||| |  || | ||| | |||    
T  19433804 attcaatttggggatattgatttttagttcaggaaccaaaatgaccattttcta-cttcactttagtccctctcacacatcagatgtcatgtcatcgtaa 19433902  T
Q  234 aacatttgtcacaccatcacttaacaaaattatttaacaccagggattaaagtgataac 292  Q
    || || ||||||| |||||||||||| ||||||||||| |||  || ||||||||||||    
T  19433903 aatatgtgtcacatcatcacttaacagaattatttaacgccatagactaaagtgataac 19433961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 127 - 241
Target Start/End: Complemental strand, 39824387 - 39824276
Alignment:
Q  127 atttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctc 226  Q
    ||||||||||||||||| | ||||||||||   |||| ||| | ||| ||| ||||||||| |||||||||||||||||||| ||||||  |  ||| ||    
T  39824387 atttgaaattcaatttgggaatattgattt---attcaggggctaaagtgaccattttctactttcactttagtccctgtgacacttcatgcaccttgtc 39824291  T
Q  227 agcataaaacatttg 241  Q
    |||| ||||||||||    
T  39824290 agcacaaaacatttg 39824276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 118 - 208
Target Start/End: Complemental strand, 48777507 - 48777417
Alignment:
Q  118 gatttaggaatttgaaattcaattt-gaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    |||||||| |||||||||||||||| | ||||||||||||| | ||| || | |||| ||| ||||||||||||||||||| ||||||||||    
T  48777507 gatttagggatttgaaattcaattttggggatattgattttgg-ttcaggaatcaaagtgaccattttctattttcactttggtccctgtga 48777417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 208
Target Start/End: Complemental strand, 2677193 - 2677096
Alignment:
Q  111 aatttgagatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    |||| ||||| |||| |||||| ||| |||||  |||||||||||||   ||| |||| |||| ||||||||||||| |||||||||||||| |||||    
T  2677193 aattcgagatctagggatttgagatttaatttagggatattgatttttagttcagggaacaaagtgatcattttctactttcactttagtccatgtga 2677096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 168 - 333
Target Start/End: Complemental strand, 22621347 - 22621182
Alignment:
Q  168 accaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgtcacaccatcacttaacaaaattatt 267  Q
    |||||| ||||||||||||| |||||||||||||| ||||| || |||  |  ||| |||||| |||||||||||||   ||||| |||||| || | ||    
T  22621347 accaaagtgatcattttctactttcactttagtccttgtgacacatcatgcgccttgtcagcaaaaaacatttgtcaactcatcagttaacagaagtttt 22621248  T
Q  268 taacaccagggattaaagtgataacaaaagtgtacattcaaatattactttatatttaatcctaag 333  Q
    ||||  ||  || || | |||||||| ||||| |||||||   | |||||||||||||||| ||||    
T  22621247 taacgacatagactagactgataacagaagtgcacattcagggactactttatatttaatcttaag 22621182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 151
Target Start/End: Complemental strand, 8047143 - 8047052
Alignment:
Q  59 tttaatgaaagatttgattttgaacaaaagaggaaattagttgacatttaagaatttgagatttaggaatttgaaattcaatttgaggatatt 151  Q
    |||||||||| ||| ||| |||||||||||||  |||||| ||| |||||   |||||||||||||| |||| |||||||||||| |||||||    
T  8047143 tttaatgaaatatt-gatattgaacaaaagagataattagatgatatttagtgatttgagatttagggatttaaaattcaatttggggatatt 8047052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 208
Target Start/End: Complemental strand, 35727999 - 35727858
Alignment:
Q  75 attttgaacaaaagaggaaattagttgacatttaagaatttgagatttagga--------atttgaaattcaatttgaggatattgattttcgattcggg 166  Q
    ||||||||||||||||  |||||| ||||||||| | |||||||||||||||        |||||| |||||||||| | ||||||||||| | ||   |    
T  35727999 attttgaacaaaagagagaattagatgacatttagggatttgagatttaggaatttagaaatttgatattcaatttgggaatattgatttttggttaaag 35727900  T
Q  167 gaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    || |||| ||| ||||||||| | ||||||| ||||||||||    
T  35727899 gatcaaagtgaccattttctactatcactttggtccctgtga 35727858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 240 - 300
Target Start/End: Complemental strand, 44529176 - 44529116
Alignment:
Q  240 tgtcacaccatcacttaacaaaattatttaacaccagggattaaagtgataacaaaagtgt 300  Q
    ||||||| |||| |||||||||||||||||||  |||||| ||||||||||||| ||||||    
T  44529176 tgtcacatcatcgcttaacaaaattatttaacgtcagggactaaagtgataacagaagtgt 44529116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 202
Target Start/End: Original strand, 45584370 - 45584453
Alignment:
Q  118 gatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtcc 202  Q
    ||||||||||||||| |||||||||| | ||||||||||| | ||| ||||||||| ||| |||||||||  |||||||| ||||    
T  45584370 gatttaggaatttgatattcaatttgggaatattgatttt-ggttcagggaccaaagtgaccattttctacattcactttggtcc 45584453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 307
Target Start/End: Complemental strand, 8870202 - 8870058
Alignment:
Q  165 gggaccaaaatgatcattttctattttcactttagtccctgtgatacttcaca--cttcttctcagcataaaacatttgtcacaccatcacttaacaaaa 262  Q
    ||||||||| | ||||||||||| ||||| |||||||  ||||| || ||| |  || ||| ||||||||||||||| | |||| ||| | | |||||||    
T  8870202 gggaccaaagtaatcattttctactttcattttagtctttgtgacacctcatatactccttgtcagcataaaacattggccacatcattaataaacaaaa 8870103  T
Q  263 ttatttaacaccagggattaaagtgataacaaaagtgtacattca 307  Q
    | |||||| | |||||| |||| |||||||| || || |||||||    
T  8870102 taatttaatatcagggactaaactgataacagaaatgcacattca 8870058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 8870989 - 8871057
Alignment:
Q  225 tcagcataaaacatttgtcacaccatcacttaacaaaattatttaacaccagggattaaagtgataaca 293  Q
    ||||||||||||||||| |||| ||| | |||||||||| |||||| | ||| || |||||||||||||    
T  8870989 tcagcataaaacatttgccacatcattagttaacaaaataatttaatatcagagactaaagtgataaca 8871057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 254 - 330
Target Start/End: Original strand, 8879532 - 8879608
Alignment:
Q  254 ttaacaaaattatttaacaccagggattaaagtgataacaaaagtgtacattcaaatattactttatatttaatcct 330  Q
    ||||||||||||||||||  |||||| ||||||||||||| || || |||||||   | |||||| |||||||||||    
T  8879532 ttaacaaaattatttaacgtcagggactaaagtgataacagaaatgcacattcaggaactactttgtatttaatcct 8879608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 12220179 - 12220139
Alignment:
Q  231 taaaacatttgtcacaccatcacttaacaaaattatttaac 271  Q
    |||||||| ||||||| ||||||||||||||||||||||||    
T  12220179 taaaacatgtgtcacatcatcacttaacaaaattatttaac 12220139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 24935045 - 24934965
Alignment:
Q  120 tttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagt 200  Q
    |||||| |||||| |||||||||  | ||||||||||||| ||  |||| |||| ||| ||||||||| ||||||||||||    
T  24935045 tttagggatttgagattcaatttaggaatattgattttcggtttagggatcaaagtgaccattttctactttcactttagt 24934965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 307
Target Start/End: Complemental strand, 27067991 - 27067863
Alignment:
Q  179 cattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgtcacaccatcacttaacaaaattatttaacaccaggg 278  Q
    ||||||||| ||||||||||||| |||||| ||  || |||  || |||||||||| ||||||||||| || |  ||| || ||||||||||   ||| |    
T  27067991 cattttctactttcactttagtctctgtgacacaccatactctttgtcagcataaaccatttgtcacatcacccgttagcataattatttaatgtcagag 27067892  T
Q  279 attaaagtgataacaaaagtgtacattca 307  Q
    | |||||||||||  |||||| |||||||    
T  27067891 actaaagtgataatgaaagtgcacattca 27067863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 307
Target Start/End: Original strand, 27210322 - 27210450
Alignment:
Q  179 cattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgtcacaccatcacttaacaaaattatttaacaccaggg 278  Q
    ||||||||| ||||||||||||| |||||| ||  || |||  || |||||||||| ||||||||||| || |  ||| || ||||||||||   ||| |    
T  27210322 cattttctactttcactttagtctctgtgacacaccatactctttgtcagcataaaccatttgtcacatcacccgttagcataattatttaatgtcagag 27210421  T
Q  279 attaaagtgataacaaaagtgtacattca 307  Q
    | |||||||||||  |||||| |||||||    
T  27210422 actaaagtgataatgaaagtgcacattca 27210450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 208
Target Start/End: Original strand, 48647302 - 48647406
Alignment:
Q  104 atttaagaatttgagatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccc 203  Q
    |||||||| || | ||| |||| |||||  |||||||||| | ||||||||||| | ||| ||||| ||| ||| ||||||||| ||||||||| ||||     
T  48647302 atttaagatttagggatatagggatttggtattcaatttgggcatattgatttttggttcagggacgaaagtgaccattttctactttcactttggtcct 48647401  T
Q  204 tgtga 208  Q
    |||||    
T  48647402 tgtga 48647406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 201
Target Start/End: Complemental strand, 385088 - 385006
Alignment:
Q  118 gatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtc 201  Q
    |||||| |||||||| ||| |||||| |||||||||||||||||||   || |||| |||  |||||||| |||||||||||||    
T  385088 gatttaagaatttgagatttaatttg-ggatattgattttcgattcatagatcaaagtgacaattttctactttcactttagtc 385006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 202
Target Start/End: Original strand, 7509327 - 7509410
Alignment:
Q  120 tttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatga-tcattttctattttcactttagtcc 202  Q
    |||||| |||||| |||||||||| ||||||||||||| | ||  ||||||||| ||| |  ||||||| ||||||||||||||    
T  7509327 tttagggatttgagattcaatttggggatattgatttttggtttagggaccaaagtgactatttttctactttcactttagtcc 7509410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 307
Target Start/End: Complemental strand, 33060958 - 33060891
Alignment:
Q  240 tgtcacaccatcacttaacaaaattatttaacaccagggattaaagtgataacaaaagtgtacattca 307  Q
    ||||||| ||||| |||||| |||||||||||  ||| || ||||||||||||  |||||||||||||    
T  33060958 tgtcacatcatcatttaacagaattatttaacgtcagagactaaagtgataacggaagtgtacattca 33060891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 118 - 208
Target Start/End: Complemental strand, 43457717 - 43457628
Alignment:
Q  118 gatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtga 208  Q
    |||||| | |||||| |||||||||  ||||||||||||| | | | ||||||||| ||| |||||| || ||||||||||||| ||||||    
T  43457717 gatttaaggatttgagattcaatttagggatattgatttttggt-cagggaccaaagtgaccattttttactttcactttagtctctgtga 43457628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 118 - 200
Target Start/End: Original strand, 43461590 - 43461672
Alignment:
Q  118 gatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagt 200  Q
    |||||||| |||||| ||||||||   ||||||||||||| | ||| |||| |||| ||| |||||| || ||||||||||||    
T  43461590 gatttagggatttgagattcaattgagggatattgatttttggttcagggatcaaagtgaccattttttactttcactttagt 43461672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 197
Target Start/End: Original strand, 42478145 - 42478222
Alignment:
Q  120 tttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcacttt 197  Q
    |||||| |||||| |||||||| | |||||||||||||   |||  |||||||| ||| ||||||||| |||||||||    
T  42478145 tttagggatttgatattcaattaggggatattgattttttgttcatggaccaaagtgaccattttctactttcacttt 42478222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 271
Target Start/End: Complemental strand, 79343 - 79190
Alignment:
Q  118 gatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcaca 217  Q
    |||||||||||| || |||||||||  | |||||||||||  |||| ||||||||| ||||||||||||  ||||| |||||||||||||| || ||| |    
T  79343 gatttaggaattcgagattcaatttaggcatattgattttttattcagggaccaaagtgatcattttcttctttcattttagtccctgtgagacctcata 79244  T
Q  218 cttcttctcagcataaaacatttgtcacaccatcacttaacaaaattatttaac 271  Q
      || | ||| | |||||||| ||||||| ||||||||||||||||||||||||    
T  79243 tgtcatgtcatcgtaaaacatgtgtcacatcatcacttaacaaaattatttaac 79190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 48; Significance: 5e-18; HSPs: 2)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 146 - 292
Target Start/End: Complemental strand, 3189 - 3042
Alignment:
Q  146 gatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagc-ataaaacatttgtca 244  Q
    |||||||||||||||||| | ||||||||||| ||||||||| || ||||||| ||| ||||| || |||  |  ||| ||||| | |||||||||||||    
T  3189 gatattgattttcgattcagagaccaaaatgaccattttctacttccactttaatccttgtgacacctcatgcaccttgtcagcgaaaaaacatttgtca 3090  T
Q  245 caccatcacttaacaaaattatttaacaccagggattaaagtgataac 292  Q
    | |||||| ||||||||| | |||||| |||| || |||| |||||||    
T  3089 ccccatcaattaacaaaagtttttaacgccagagactaaactgataac 3042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237; HSP #2
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 146 - 299
Target Start/End: Complemental strand, 1927 - 1774
Alignment:
Q  146 gatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgtcac 245  Q
    |||||||||||||||||| | |||||||||||  |||||||| || ||||||||| | || || || |||  |  ||| |||||| |||||||| |||||    
T  1927 gatattgattttcgattcagagaccaaaatgactattttctacttccactttagttcttgcgacacctcatgcaccttgtcagcaaaaaacattcgtcac 1828  T
Q  246 accatcacttaacaaaattatttaacaccagggattaaagtgataacaaaagtg 299  Q
     |||||| ||||||||| | |||||| |||| || |||| |||||||| |||||    
T  1827 cccatcaattaacaaaagtttttaacgccagagactaaactgataacagaagtg 1774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 5e-18; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 146 - 292
Target Start/End: Complemental strand, 29856987 - 29856840
Alignment:
Q  146 gatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagc-ataaaacatttgtca 244  Q
    |||||||||||||||||| | ||||||||||| ||||||||| || ||||||| ||| ||||| || |||  |  ||| ||||| | |||||||||||||    
T  29856987 gatattgattttcgattcagagaccaaaatgaccattttctacttccactttaatccttgtgacacctcatgcaccttgtcagcgaaaaaacatttgtca 29856888  T
Q  245 caccatcacttaacaaaattatttaacaccagggattaaagtgataac 292  Q
    | |||||| ||||||||| | |||||| |||| || |||| |||||||    
T  29856887 ccccatcaattaacaaaagtttttaacgccagagactaaactgataac 29856840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 146 - 299
Target Start/End: Complemental strand, 29845722 - 29845569
Alignment:
Q  146 gatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgtcac 245  Q
    |||||||||||||||||| | |||||||||||  |||||||| || ||||||||| | || || || |||  |  ||| |||||| |||||||| |||||    
T  29845722 gatattgattttcgattcagagaccaaaatgactattttctacttccactttagttcttgcgacacctcatgcaccttgtcagcaaaaaacattcgtcac 29845623  T
Q  246 accatcacttaacaaaattatttaacaccagggattaaagtgataacaaaagtg 299  Q
     |||||| ||||||||| | |||||| |||| || |||| |||||||| |||||    
T  29845622 cccatcaattaacaaaagtttttaacgccagagactaaactgataacagaagtg 29845569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 141 - 229
Target Start/End: Complemental strand, 30748237 - 30748149
Alignment:
Q  141 ttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagc 229  Q
    ||||||||||||||||| ||||| ||||||||| ||| |||||| || |||||||||||||||||||| || ||| ||| ||| |||||    
T  30748237 ttgaggatattgatttttgattcagggaccaaattgaccattttttactttcactttagtccctgtgacacgtcatactccttgtcagc 30748149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 118 - 245
Target Start/End: Original strand, 19600098 - 19600224
Alignment:
Q  118 gatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcaca 217  Q
    ||||||||||| ||| |||||||||  ||||||| ||||||||||  || |||||| ||| ||||||||| |||||||||||||||||||| | ||||      
T  19600098 gatttaggaatctgagattcaatttagggatattaattttcgatttagg-accaaagtgaccattttctactttcactttagtccctgtgacatttcatg 19600196  T
Q  218 cttcttctcagcataaaacatttgtcac 245  Q
    |  ||| ||| || ||||||||||||||    
T  19600197 caccttgtcaccacaaaacatttgtcac 19600224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 328
Target Start/End: Original strand, 24621288 - 24621425
Alignment:
Q  191 tcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgtcacaccatcacttaacaaaattatttaacaccagggattaaagtgata 290  Q
    ||||||| |||||||||| | ||||  |  ||| |||||| |||||||||||||| |||||| ||||||||| | | |||| |||| || |||| | |||    
T  24621288 tcactttggtccctgtgacatttcatgcaccttgtcagcacaaaacatttgtcaccccatcagttaacaaaagtttgtaacgccagagactaaactaata 24621387  T
Q  291 acaaaagtgtacattcaaatattactttatatttaatc 328  Q
    ||||||||| | ||||||| | |||||| |||||||||    
T  24621388 acaaaagtgcaaattcaaaaactactttgtatttaatc 24621425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 231 - 347
Target Start/End: Complemental strand, 10855963 - 10855848
Alignment:
Q  231 taaaacatttgtcacaccatcacttaacaaaattatttaacaccagggattaaagtgataacaaaagtgtacattcaaatattactttatatttaatcct 330  Q
    |||||| | |||||||  ||||||||||| |||||||||||  |||||| ||||| ||||||||||||||||  || | || | |||| |||||||||||    
T  10855963 taaaacttgtgtcacatgatcacttaacataattatttaacgtcagggactaaagcgataacaaaagtgtacggtc-agtacttctttgtatttaatcct 10855865  T
Q  331 aagccaaagatctttgt 347  Q
     || |||||| ||||||    
T  10855864 gagtcaaagacctttgt 10855848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 271
Target Start/End: Original strand, 31239765 - 31239993
Alignment:
Q  49 aagttgttgttttaatgaaagatttgattttgaacaaaagaggaaattagttgacatttaagaatttgagatttag--------gaatttgaaattcaat 140  Q
    |||||||||||| ||||||| |||  ||||||||||||||||  ||||||  || ||||||| |||||||||||||        | |||||| |||||||    
T  31239765 aagttgttgttt-aatgaaaaatta-attttgaacaaaagagagaattagacgatatttaaggatttgagatttagggatttaaggatttgagattcaat 31239862  T
Q  141 ttgaggatattgattttcgattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacattt 240  Q
    ||| ||||||||||||| | |||  | || ||| ||| ||||||||| ||| |||||||| | ||||| || | | |  || | ||| | ||||| || |    
T  31239863 ttggggatattgatttttggttcaagaacaaaagtgaccattttctactttgactttagttcatgtgacaccttatatgtcatgtcatcgtaaaatatgt 31239962  T
Q  241 gtcacaccatcacttaacaaaattatttaac 271  Q
    |||||| |||||||||||| ||| |||||||    
T  31239963 gtcacatcatcacttaacagaatcatttaac 31239993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 379 - 433
Target Start/End: Complemental strand, 11656176 - 11656120
Alignment:
Q  379 atactccatccgtctca--ataatcgtctcttttcccatttttatttttctcaaaat 433  Q
    ||||||| |||||||||  ||||| || ||||| |||||||||||||||||||||||    
T  11656176 atactccctccgtctcacaataattgtttctttacccatttttatttttctcaaaat 11656120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 19600025 - 19600082
Alignment:
Q  59 tttaatgaaagatttgattttgaac-aaaagaggaaattagttgacatttaagaattt 115  Q
    ||||||| ||||||||||||||||| |||| |||||||||| ||| ||||||| ||||    
T  19600025 tttaatggaagatttgattttgaacaaaaaaaggaaattagatgagatttaaggattt 19600082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 251 - 292
Target Start/End: Complemental strand, 31219092 - 31219051
Alignment:
Q  251 cacttaacaaaattatttaacaccagggattaaagtgataac 292  Q
    ||||||| | |||||||||||| |||||||||||||||||||    
T  31219092 cacttaagagaattatttaacatcagggattaaagtgataac 31219051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 46; Significance: 8e-17; HSPs: 2)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 59 - 301
Target Start/End: Complemental strand, 5918 - 5686
Alignment:
Q  59 tttaatgaaagatttgattttgaacaaaagaggaaattagttgacatttaagaatttgagatttaggaatttgaaattcaatttgaggatattgattttc 158  Q
    ||||||| |||||| |||||||||||||||||  |||||| |||||||||||       || ||||| |||||| ||| ||||||||||||||||||||     
T  5918 tttaatggaagatt-gattttgaacaaaagagagaattagatgacatttaag-------gaattagggatttgagatttaatttgaggatattgattttt 5827  T
Q  159 gattcggggaccaaaatgatcattttctattttcactttagtccctgtgatacttcacacttcttctcagcataaaacatttgtcacaccatcacttaac 258  Q
    | ||| |||| |||| ||| || ||| || |||||||||||||  ||||| ||  | ||  || | ||| | ||||| || |||| || |||||| ||||    
T  5826 ggttcagggatcaaagtgaccactttttactttcactttagtctatgtgacac--ctcatgtcatgtcatcgtaaaatatgtgtcgcatcatcacataac 5729  T
Q  259 aaaattatttaacaccagggattaaagtgataacaaaagtgta 301  Q
    | ||||||||||| |||| || ||||||||||||  |||||||    
T  5728 ataattatttaacgccagagactaaagtgataacggaagtgta 5686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 197
Target Start/End: Original strand, 6052 - 6185
Alignment:
Q  72 ttgattttgaacaaaagaggaaattagttgacatttaagaatttgagatt--------taggaatttgaaattcaatttgaggatattgattttcgattc 163  Q
    |||||||||||||||||||  |||||  ||||||||| | ||||||||||        ||||||||||| |||  ||||| ||||||||||||| | |||    
T  6052 ttgattttgaacaaaagagataattatatgacatttagggatttgagatttagggatttaggaatttgagattatatttggggatattgatttttggttc 6151  T
Q  164 ggggaccaaaatgatcattttctattttcacttt 197  Q
     ||||||||| ||| |||||| || |||||||||    
T  6152 agggaccaaagtgaccattttttactttcacttt 6185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 193
Target Start/End: Original strand, 36391 - 36473
Alignment:
Q  111 aatttgagatttaggaatttgaaattcaatttgaggatattgattttcgattcggggaccaaaatgatcattttctattttca 193  Q
    |||||| | |||||| ||||||  |||||||| |||||||||||||||| ||| |||| |||| ||| ||||||||| |||||    
T  36391 aatttgggttttagggatttgagtttcaattttaggatattgattttcggttcagggatcaaagtgaccattttctactttca 36473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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