View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5693-Insertion-2 (Length: 1030)

Name: NF5693-Insertion-2
Description: NF5693
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5693-Insertion-2
NF5693-Insertion-2
[»] chr3 (49 HSPs)
chr3 (6-1030)||(2175176-2176202)
chr3 (6-1030)||(2151505-2152543)
chr3 (95-579)||(2195862-2196340)
chr3 (34-368)||(2184069-2184402)
chr3 (846-1018)||(2196557-2196731)
chr3 (646-756)||(40880915-40881026)
chr3 (637-798)||(36646340-36646501)
chr3 (634-732)||(38971275-38971373)
chr3 (660-760)||(43115044-43115145)
chr3 (664-796)||(1816536-1816668)
chr3 (634-739)||(37273144-37273249)
chr3 (637-756)||(14548679-14548799)
chr3 (663-760)||(41724199-41724298)
chr3 (646-756)||(21574483-21574593)
chr3 (634-719)||(50004682-50004768)
chr3 (669-722)||(3044249-3044302)
chr3 (672-760)||(33725867-33725956)
chr3 (663-706)||(5391922-5391965)
chr3 (664-739)||(30923883-30923958)
chr3 (638-700)||(2304230-2304292)
chr3 (664-710)||(21754756-21754802)
chr3 (673-727)||(25925764-25925818)
chr3 (667-784)||(36101533-36101650)
chr3 (667-784)||(36139843-36139960)
chr3 (674-756)||(53848058-53848140)
chr3 (678-798)||(40665380-40665500)
chr3 (662-719)||(42745068-42745125)
chr3 (663-723)||(3015827-3015887)
chr3 (663-739)||(39602194-39602270)
chr3 (667-735)||(50952347-50952415)
chr3 (666-706)||(53762381-53762421)
chr3 (638-717)||(1810009-1810088)
chr3 (749-820)||(20173959-20174029)
chr3 (636-735)||(36200110-36200209)
chr3 (663-702)||(45541618-45541657)
chr3 (642-717)||(47132026-47132101)
chr3 (662-756)||(11253494-11253588)
chr3 (636-702)||(24624257-24624323)
chr3 (634-684)||(25182942-25182992)
chr3 (669-739)||(26808185-26808255)
chr3 (690-827)||(27792794-27792931)
chr3 (669-739)||(31010412-31010482)
chr3 (669-722)||(20192596-20192649)
chr3 (634-707)||(27787053-27787126)
chr3 (665-702)||(30750047-30750084)
chr3 (663-700)||(39723384-39723421)
chr3 (690-739)||(44284091-44284140)
chr3 (634-679)||(50211805-50211850)
chr3 (662-739)||(54837017-54837094)
[»] chr2 (42 HSPs)
chr2 (84-586)||(35556549-35557044)
chr2 (242-580)||(35538267-35538605)
chr2 (846-959)||(35557276-35557388)
chr2 (892-976)||(35538870-35538954)
chr2 (670-800)||(1939323-1939453)
chr2 (663-798)||(28933775-28933909)
chr2 (632-798)||(32821760-32821926)
chr2 (634-825)||(9478223-9478414)
chr2 (663-828)||(18962021-18962187)
chr2 (669-739)||(34652026-34652096)
chr2 (662-739)||(41817178-41817255)
chr2 (638-721)||(43985237-43985320)
chr2 (663-756)||(10285852-10285946)
chr2 (634-795)||(12313128-12313289)
chr2 (639-689)||(43808618-43808668)
chr2 (663-798)||(9878666-9878801)
chr2 (634-756)||(30552598-30552722)
chr2 (663-722)||(1647263-1647322)
chr2 (664-798)||(25790077-25790211)
chr2 (662-799)||(22681168-22681305)
chr2 (646-739)||(1741999-1742092)
chr2 (631-684)||(27699481-27699534)
chr2 (663-740)||(33192211-33192288)
chr2 (634-739)||(43965077-43965181)
chr2 (663-715)||(5902533-5902585)
chr2 (663-739)||(33941919-33941995)
chr2 (663-739)||(43065434-43065510)
chr2 (666-721)||(1056116-1056171)
chr2 (634-729)||(13234526-13234621)
chr2 (634-784)||(35485882-35486032)
chr2 (639-722)||(37034049-37034132)
chr2 (746-828)||(3102614-3102695)
chr2 (766-800)||(3458606-3458640)
chr2 (663-729)||(11344754-11344819)
chr2 (634-716)||(28039287-28039369)
chr2 (766-824)||(33576681-33576739)
chr2 (671-784)||(33942115-33942228)
chr2 (635-737)||(43811123-43811224)
chr2 (634-739)||(787342-787447)
chr2 (713-825)||(28803540-28803652)
chr2 (766-827)||(35252209-35252270)
chr2 (638-711)||(43456666-43456739)
[»] chr6 (48 HSPs)
chr6 (663-795)||(30523614-30523745)
chr6 (669-784)||(4420610-4420723)
chr6 (634-798)||(1402947-1403111)
chr6 (637-734)||(1669756-1669853)
chr6 (648-713)||(4080952-4081017)
chr6 (634-703)||(27693394-27693463)
chr6 (634-722)||(2460106-2460194)
chr6 (660-798)||(2027387-2027525)
chr6 (641-739)||(20368142-20368240)
chr6 (669-722)||(9667975-9668028)
chr6 (663-739)||(7931710-7931786)
chr6 (663-706)||(769181-769224)
chr6 (663-706)||(1575938-1575981)
chr6 (664-798)||(2514653-2514787)
chr6 (641-712)||(22743518-22743589)
chr6 (638-721)||(30863274-30863357)
chr6 (663-706)||(31624133-31624176)
chr6 (652-735)||(32577959-32578042)
chr6 (669-739)||(2112210-2112280)
chr6 (648-722)||(10616510-10616584)
chr6 (629-703)||(27595517-27595591)
chr6 (634-736)||(33080533-33080635)
chr6 (667-721)||(34403883-34403937)
chr6 (634-792)||(281803-281961)
chr6 (666-798)||(4006665-4006797)
chr6 (674-798)||(28660755-28660879)
chr6 (639-736)||(34939526-34939623)
chr6 (663-735)||(2263206-2263278)
chr6 (663-739)||(2455820-2455896)
chr6 (675-739)||(6647397-6647461)
chr6 (660-719)||(323994-324053)
chr6 (663-722)||(781408-781467)
chr6 (679-738)||(2168028-2168087)
chr6 (679-738)||(2179661-2179720)
chr6 (710-756)||(7149504-7149551)
chr6 (634-729)||(32171338-32171433)
chr6 (652-739)||(33887840-33887927)
chr6 (635-726)||(34544100-34544191)
chr6 (663-721)||(725639-725697)
chr6 (669-739)||(4246420-4246490)
chr6 (675-721)||(13908491-13908537)
chr6 (673-739)||(25100053-25100119)
chr6 (663-700)||(696491-696528)
chr6 (634-687)||(3158661-3158714)
chr6 (744-825)||(10032495-10032575)
chr6 (662-703)||(27615256-27615297)
chr6 (637-686)||(33116647-33116696)
chr6 (634-735)||(34538173-34538274)
[»] chr1 (42 HSPs)
chr1 (663-739)||(4699599-4699675)
chr1 (676-784)||(30257648-30257756)
chr1 (663-736)||(35925703-35925776)
chr1 (663-739)||(24460391-24460467)
chr1 (654-721)||(38266435-38266502)
chr1 (663-760)||(39596585-39596682)
chr1 (634-798)||(31517695-31517859)
chr1 (634-738)||(32515396-32515500)
chr1 (663-739)||(37811862-37811938)
chr1 (663-722)||(6262047-6262106)
chr1 (666-756)||(7218061-7218152)
chr1 (766-825)||(7274026-7274085)
chr1 (669-798)||(30259476-30259606)
chr1 (637-719)||(4868430-4868511)
chr1 (640-738)||(10439697-10439795)
chr1 (662-739)||(15942730-15942808)
chr1 (744-813)||(15360830-15360898)
chr1 (669-738)||(26184759-26184828)
chr1 (663-724)||(43722312-43722373)
chr1 (634-706)||(4445751-4445823)
chr1 (663-739)||(7262502-7262578)
chr1 (636-784)||(15488919-15489071)
chr1 (665-721)||(37593670-37593726)
chr1 (638-710)||(38170649-38170721)
chr1 (634-686)||(42336678-42336730)
chr1 (668-739)||(6292503-6292574)
chr1 (669-724)||(6976950-6977004)
chr1 (634-800)||(10199363-10199529)
chr1 (668-739)||(23445344-23445415)
chr1 (767-825)||(4200153-4200211)
chr1 (746-800)||(19092431-19092485)
chr1 (669-735)||(23895343-23895409)
chr1 (641-735)||(27140492-27140586)
chr1 (652-706)||(33185931-33185985)
chr1 (766-827)||(49516991-49517053)
chr1 (669-702)||(3070080-3070113)
chr1 (663-700)||(4481979-4482016)
chr1 (666-739)||(10744311-10744384)
chr1 (655-755)||(15515534-15515635)
chr1 (646-739)||(25479591-25479684)
chr1 (670-739)||(35080060-35080129)
chr1 (712-800)||(42556664-42556752)
[»] chr4 (38 HSPs)
chr4 (634-791)||(2996531-2996688)
chr4 (634-855)||(14011128-14011349)
chr4 (663-739)||(1137722-1137798)
chr4 (663-739)||(20936213-20936289)
chr4 (634-722)||(27123307-27123395)
chr4 (634-798)||(4071833-4071993)
chr4 (662-798)||(24929444-24929580)
chr4 (634-739)||(50742791-50742896)
chr4 (663-711)||(1965979-1966027)
chr4 (653-760)||(28300273-28300381)
chr4 (663-739)||(46110213-46110289)
chr4 (672-739)||(11264311-11264378)
chr4 (660-739)||(23819099-23819178)
chr4 (639-721)||(10173550-10173631)
chr4 (634-767)||(53315307-53315441)
chr4 (668-784)||(4684094-4684211)
chr4 (668-760)||(6466035-6466128)
chr4 (641-730)||(6987703-6987792)
chr4 (664-737)||(30066751-30066824)
chr4 (695-798)||(43371987-43372088)
chr4 (634-686)||(6428081-6428133)
chr4 (675-735)||(19422412-19422472)
chr4 (629-693)||(50746031-50746095)
chr4 (652-711)||(17223009-17223068)
chr4 (766-853)||(19422314-19422401)
chr4 (652-798)||(45128283-45128429)
chr4 (690-800)||(49219088-49219198)
chr4 (692-735)||(51808886-51808929)
chr4 (767-837)||(9319283-9319353)
chr4 (649-695)||(25952871-25952917)
chr4 (744-798)||(27623586-27623639)
chr4 (660-702)||(27970105-27970147)
chr4 (634-724)||(33534124-33534214)
chr4 (634-695)||(1554963-1555024)
chr4 (682-798)||(10192235-10192350)
chr4 (675-736)||(29467620-29467681)
chr4 (677-825)||(30207569-30207716)
chr4 (641-702)||(46090776-46090837)
[»] chr7 (32 HSPs)
chr7 (634-792)||(28165048-28165206)
chr7 (646-784)||(31338473-31338611)
chr7 (634-687)||(8094368-8094421)
chr7 (690-798)||(15075096-15075205)
chr7 (652-854)||(27626096-27626299)
chr7 (663-706)||(15740395-15740438)
chr7 (663-702)||(30535610-30535649)
chr7 (661-735)||(9423576-9423650)
chr7 (662-799)||(38010664-38010801)
chr7 (663-755)||(3610724-3610817)
chr7 (690-735)||(27121604-27121649)
chr7 (634-711)||(36598311-36598388)
chr7 (634-791)||(44151431-44151592)
chr7 (646-722)||(22387863-22387939)
chr7 (634-730)||(33894646-33894742)
chr7 (634-702)||(36887316-36887384)
chr7 (663-739)||(44615088-44615164)
chr7 (663-722)||(941567-941626)
chr7 (680-808)||(10190737-10190864)
chr7 (663-702)||(11048074-11048113)
chr7 (663-702)||(19719053-19719092)
chr7 (646-717)||(28727730-28727801)
chr7 (663-702)||(43250683-43250722)
chr7 (663-798)||(46081984-46082122)
chr7 (673-739)||(529385-529451)
chr7 (669-727)||(12234879-12234937)
chr7 (663-700)||(11047916-11047953)
chr7 (634-687)||(25670541-25670594)
chr7 (663-704)||(29290378-29290419)
chr7 (646-739)||(39360033-39360126)
chr7 (663-700)||(43219788-43219825)
chr7 (744-825)||(49060464-49060544)
[»] chr5 (31 HSPs)
chr5 (639-739)||(37611175-37611275)
chr5 (639-739)||(37787905-37788005)
chr5 (654-798)||(14295457-14295601)
chr5 (634-738)||(4619718-4619822)
chr5 (646-721)||(8089964-8090039)
chr5 (669-791)||(15003504-15003626)
chr5 (664-739)||(17258868-17258943)
chr5 (641-800)||(37526161-37526320)
chr5 (641-800)||(37588322-37588481)
chr5 (646-798)||(35960365-35960516)
chr5 (641-722)||(37690598-37690679)
chr5 (634-702)||(11700333-11700401)
chr5 (663-739)||(17368686-17368762)
chr5 (660-739)||(40205055-40205134)
chr5 (637-719)||(12595674-12595756)
chr5 (678-740)||(19369322-19369384)
chr5 (744-821)||(35135728-35135804)
chr5 (663-700)||(37794682-37794719)
chr5 (678-739)||(40864428-40864489)
chr5 (634-730)||(28586721-28586817)
chr5 (663-798)||(34690825-34690959)
chr5 (747-799)||(39823190-39823241)
chr5 (744-795)||(583839-583889)
chr5 (672-739)||(4855708-4855775)
chr5 (653-736)||(36542256-36542339)
chr5 (660-739)||(36638757-36638836)
chr5 (766-828)||(17756816-17756878)
chr5 (675-756)||(32408588-32408670)
chr5 (669-739)||(41957441-41957511)
chr5 (663-700)||(37489066-37489103)
chr5 (676-721)||(42375302-42375347)
[»] chr8 (32 HSPs)
chr8 (646-739)||(7918413-7918506)
chr8 (765-826)||(29699177-29699238)
chr8 (663-739)||(14949876-14949952)
chr8 (665-783)||(42215292-42215410)
chr8 (663-760)||(8629445-8629542)
chr8 (662-739)||(39551192-39551269)
chr8 (638-722)||(9700028-9700112)
chr8 (635-722)||(27645931-27646018)
chr8 (657-790)||(29973040-29973174)
chr8 (668-753)||(5499037-5499122)
chr8 (708-797)||(10437837-10437925)
chr8 (663-736)||(2458550-2458623)
chr8 (667-740)||(3254234-3254307)
chr8 (634-739)||(13000379-13000484)
chr8 (641-722)||(30918140-30918220)
chr8 (663-739)||(10383895-10383971)
chr8 (663-739)||(12851186-12851262)
chr8 (675-735)||(20672764-20672824)
chr8 (663-710)||(3090185-3090232)
chr8 (638-800)||(31862442-31862603)
chr8 (663-710)||(39049311-39049358)
chr8 (663-706)||(43368684-43368727)
chr8 (766-828)||(2364560-2364622)
chr8 (663-717)||(9835884-9835938)
chr8 (634-688)||(30191096-30191150)
chr8 (652-734)||(31875568-31875650)
chr8 (679-792)||(33714236-33714348)
chr8 (667-729)||(41606891-41606953)
chr8 (662-711)||(926513-926562)
chr8 (663-728)||(5088873-5088938)
chr8 (662-703)||(29262857-29262898)
chr8 (657-702)||(36626435-36626480)
[»] scaffold0254 (1 HSPs)
scaffold0254 (679-738)||(2612-2671)
[»] scaffold0024 (1 HSPs)
scaffold0024 (766-825)||(27500-27559)
[»] scaffold0004 (1 HSPs)
scaffold0004 (662-716)||(98623-98677)
[»] scaffold0608 (1 HSPs)
scaffold0608 (663-700)||(9621-9658)
[»] scaffold0072 (1 HSPs)
scaffold0072 (663-736)||(4972-5045)


Alignment Details
Target: chr3 (Bit Score: 785; Significance: 0; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 785; E-Value: 0
Query Start/End: Original strand, 6 - 1030
Target Start/End: Original strand, 2175176 - 2176202
Alignment:
Q  6 catgtataccgcttgttagcaccaaaaactatatcacttgatataaccaaaaagcttggaaagtagtaaaacattaaaagatggcttatcttgcagtgtt 105  Q
    |||||||||| |||||||| |||||||  ||||||||||| ||||||||||||| | || |||||||||||| |||| ||||||||||||||||||||||    
T  2175176 catgtataccacttgttagaaccaaaatatatatcacttgttataaccaaaaagttagggaagtagtaaaacgttaagagatggcttatcttgcagtgtt 2175275  T
Q  106 tctgatactatctctttcaatctcttgtgcttcttctacttcagttgagaaaaatttcatgcagtgcatgttaaccataggtagtagcttttctgaatcc 205  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  2175276 tctgattctatctctttcaatctcttgtgcttcttctacttcagttgagaaaagtttcatgcagtgcatgttaaccataggtagtagcttttctgaatcc 2175375  T
Q  206 agtgaaaacacactgtttatcaactcatcctccatattgtttccacaagtattggaatcagtgaaacaaaatccaagatgggtgaactcatcaagcaaac 305  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||| |    
T  2175376 agtgaaaacacactgtttatcaactcatcctccatattgtatccacaagtattggaatcattgaaacaaaatccaagatggttgaattcatcaagcaagc 2175475  T
Q  306 ctcttctcattatgacaccttcccatgaatcagaaattcaagaagccatactatgcagcaaaaagattggtgtgcagattagagtggttagtggtggcca 405  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||    
T  2175476 ctcttctcattatgacaccttcccatgaatcagaaattcaagaagccatactatgcagcaaaaagaatggggtgcaaattagagtggttagtggtggcca 2175575  T
Q  406 tgattatgaaggactatcttatctttgtaaggcaccctttatcatgattgatctcatcaacatccgtaagttcgacattaatcttgccgaggaatctgct 505  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  | ||||||||||||||||||| |||||||||    
T  2175576 tgattatgaaggactatcttatctttgtaagacaccctttatcatgattgatctcatcaacatccgttcgatcgacattaatcttgccgatgaatctgct 2175675  T
Q  506 tggattcaggcaggtgcaacattaggtgaactttactataaaatctccaaagcaagtaaagttcatgcattccctgcaggtaattaattagtttgactta 605  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2175676 tggattcaggcaggtgcaacattaggtgaactttactataaaatctccaaagcaagtaaagttcatgcattccctgcaggtaattaattagtttgactta 2175775  T
Q  606 tttgagcttatctattagtattattgcgtaagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaact 705  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  2175776 tttgagcttatctattagtattattgtgtaagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgtttgtaagctgttttcaact 2175875  T
Q  706 tgtttctataagctctcaaggatagtttatgaaactatttatagcttatataaaagtagttttgactttattttatcttctgttataaaaataaccagta 805  Q
    ||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||   ||||||||||||| ||||    
T  2175876 tgtttctataaactctcaagggtagtttatgaaacaatttatagcttatataaaagtagttttgactttattttatctttccttataaaaataactagta 2175975  T
Q  806 cataaacatttatatgataa-acaatgaattaaaatgcttatccaaacaggtatatgtccaagtgttggaataggtggtcacatcaggtggaggtggatt 904  Q
     |||||||||| ||||| || | ||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  2175976 tataaacatttttatgacaacaaaattaattaaactgcttatccaaacaggtatatgtccaagtgttggagtaggtggtcacatca-gtggaggtggatt 2176074  T
Q  905 tggtaccttggttaggaaacatggtctagcagcggatcatgttgttgatgcttacataatagatgtaaatggg-aaattcttgatag-aaatc-atggga 1001  Q
    ||| |||||||| |||||||||||||||||||| |||||||||||||||||| || | ||||||||||||||| ||||||||||||| ||||| ||||||    
T  2176075 tggcaccttggtaaggaaacatggtctagcagcagatcatgttgttgatgctcaccttatagatgtaaatgggaaaattcttgatagaaaatcaatggga 2176174  T
Q  1002 gaggatgttttctgggcttattagaggag 1030  Q
    || |||||||| ||||| |||||||||||    
T  2176175 gaagatgttttttgggc-tattagaggag 2176202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 694; E-Value: 0
Query Start/End: Original strand, 6 - 1030
Target Start/End: Original strand, 2151505 - 2152543
Alignment:
Q  6 catgtataccgcttgttagcaccaaaaactatatcacttgatataaccaaaaagcttggaaagtagtaaaacattaaaagatggcttatcttgcagtgtt 105  Q
    |||||||| | |||||||| | |||||||||||||||||| ||||||||||||| | || |||| |||||||||||| ||||||||||||||||||| ||    
T  2151505 catgtatagcacttgttagaagcaaaaactatatcacttgttataaccaaaaagttagggaagttgtaaaacattaagagatggcttatcttgcagtctt 2151604  T
Q  106 tctgatactatctctttcaatctcttgtgcttcttctacttcagttgagaaaaatttcatgcagtgcatgttaaccataggtagtagcttttctgaatcc 205  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  2151605 tctgattctatctctttcaatctcttgtgcttcttctacttcagttgagaaaagtttcatgcagtgcattttaaccataggtagtagcttttctgaatcc 2151704  T
Q  206 agtgaaaacacactgtttatcaactcatcctccatattgtttccacaagtattggaatcagtgaaacaaaatccaagatgggtgaactcatcaagcaaac 305  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  2151705 agtgaaaacacattgtttatcaactcatcctccatattgtatccacaagtattggaatcattgaaacaaaatccaagatgggtgaactcatcaagcaaac 2151804  T
Q  306 ctcttctcattatgacaccttcccatgaatcagaaattcaagaagccatactatgcagcaaaaagattggtgtgcagattagagtggttagtggtggcca 405  Q
    |||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||    
T  2151805 ctcttctcattatgacaccttctcatgaatcagaaattcaatcagccatactatgcagcaaagagattggtgtgcagattagggttgttagtggtggcca 2151904  T
Q  406 tgattatgaaggactatcttatctttgtaaggcaccctttatcatgattgatctcatcaacatccgtaagttcgacattaatcttgccgaggaatctgct 505  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  | |||| |||||||||||||| |||||||||    
T  2151905 tgattatgaaggactatcttatctttgtaagacaccctttatcatgattgatctcatcaacatccgttcgatcgaaattaatcttgccgatgaatctgct 2152004  T
Q  506 tggattcaggcaggtgcaacattaggtgaactttactataaaatctccaaagcaagtaaagttcatgcattccctgcaggtaattaattagtttgactta 605  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  2152005 tggattcaggcaggtgcaacgttaggtgaactatactataaaatctccaaagcaagtaaagttcatgcattccctgcaggtacttaattagtttgactta 2152104  T
Q  606 tttgagcttatctattagtattattgcgtaagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaact 705  Q
    |||||||||| |||||||||| ||||  ||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  2152105 tttgagcttaactattagtataattgtataagcacttgtgagactaattgagatattttatgaaaacaacttatgacatgttcgtaagctgttttcaact 2152204  T
Q  706 tgtttctataagctctcaagg---------------atagtttatgaaactatttatagcttatataaaagtagttttgactttattttatcttctgtta 790  Q
    |||||||||||||||||||||               |||||||||||||| ||||||||||||||||||||| ||||  ||||||||||||||| |||||    
T  2152205 tgtttctataagctctcaaggatagtttatgaaacaatagtttatgaaacaatttatagcttatataaaagttgtttgaactttattttatcttttgtta 2152304  T
Q  791 taaaaataaccagtacataaacatttatatgataaacaatgaattaaaatgcttatccaaacaggtatatgtccaagtgttggaataggtggtcacatca 890  Q
    |||||||||| || || ||||||||| || |  ||  ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2152305 taaaaataactagcacttaaacatttttaaggcaa--aattaattaaattgcttatccaaacaggtatatgtccaagtgttggaataggtggtcacatca 2152402  T
Q  891 ggtggaggtggatttggtaccttggttaggaaacatggtctagcagcggatcatgttgttgatgcttacataatagatgtaaatggg-aaattcttgata 989  Q
     ||||||| ||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||| || | ||||||||||||||| ||||||||||||    
T  2152403 -gtggaggaggatttggtaccttggtaaggaaacatggtttagcagcagatcatgttgttgatgctcaccttatagatgtaaatgggaaaattcttgata 2152501  T
Q  990 g-aaatc-atgggagaggatgttttctgggcttattagaggag 1030  Q
    | ||||| |||||||| |||||||| ||||| |||||||||||    
T  2152502 gaaaatcaatgggagaagatgttttttgggc-tattagaggag 2152543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 342; E-Value: 0
Query Start/End: Original strand, 95 - 579
Target Start/End: Original strand, 2195862 - 2196340
Alignment:
Q  95 cttgcagtgtttctgatactatctctttcaatctcttgtgcttcttctacttcagttgagaaaaatttcatgcagtgcatgttaaccataggtagtagct 194  Q
    |||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||  |||||||| ||||||||    
T  2195862 cttgtagtgtttctgtttctatctctttcaatctcttgtgcttcttctacttcagttgaggagagtttcatgcagtgcatgacaaccatagttagtagct 2195961  T
Q  195 tttctgaatccagtgaaaacacactgtttatcaactcatcctccatattgtttccacaagtattggaatcagtgaaacaaaatccaagatgggtgaactc 294  Q
     ||||||||||| |||||| ||| |||||| ||||||| |||      ||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  2195962 attctgaatccactgaaaaaacagtgtttaccaactcaccct------tgtatccacaagtattggaatcattgaaacaaaatccaagatgggtgaactc 2196055  T
Q  295 atcaagcaaacctcttctcattatgacaccttcccatgaatcagaaattcaagaagccatactatgcagcaaaaagattggtgtgcagattagagtggtt 394  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||| || |||    
T  2196056 atcaagcaaacctcttctcattatgacaccttctcatgaatcagaaattcaatcagccatactatgcagcaaagagattggtgtgcagattagggttgtt 2196155  T
Q  395 agtggtggccatgattatgaaggactatcttatctttgtaaggcaccctttatcatgattgatctcatcaacatccgtaagttcgacattaatcttgccg 494  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  | ||||||||||||||||||    
T  2196156 agtggtggccatgattatgaaggactatcttatctttgtaagacaccctttatcatgattgatctcatcaacatccgtttgatcgacattaatcttgccg 2196255  T
Q  495 aggaatctgcttggattcaggcaggtgcaacattaggtgaactttactataaaatctccaaagcaagtaaagttcatgcattccc 579  Q
    | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2196256 atgaatctgcttggattcaggctggtgcaacattaggtgaactttactataaaatctccaaagcaagtaaagttcatggattccc 2196340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 34 - 368
Target Start/End: Original strand, 2184069 - 2184402
Alignment:
Q  34 ctatatcacttgatataaccaaaaagcttggaaagtagtaaaacattaaaagatggcttatcttgcagtgtttctgatactatctctttcaatctcttgt 133  Q
    ||||| |||||| || |||||||||| |||||||||| ||||| |||||| |||||||||||||||||| |||||||| |||||||||||||||||||||    
T  2184069 ctataccacttgttagaaccaaaaagtttggaaagtattaaaatattaaa-gatggcttatcttgcagtctttctgattctatctctttcaatctcttgt 2184167  T
Q  134 gcttcttctacttcagttgagaaaaatttcatgcagtgcatgttaaccataggtagtagcttttctgaatccagtgaaaacacactgtttatcaactcat 233  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2184168 gcttcttctacttcagttgagaaaagtttcatgcagtgcatgttaaccataggtagtagcttttctgaatccagtgaaaacacactgtttatcaactcat 2184267  T
Q  234 cctccatattgtttccacaagtattggaatcagtgaaacaaaatccaagatgggtgaactcatcaagcaaacctcttctcattatgacaccttcccatga 333  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||    
T  2184268 cctccatattgtatccacaagtattggaatcagtgaaacaaaatccaagatggttgaattcatcaagcaagcctcttctcattatgacaccttcccatga 2184367  T
Q  334 atcagaaattcaagaagccatactatgcagcaaaa 368  Q
    |||||||||||||||||||||||||||||||||||    
T  2184368 atcagaaattcaagaagccatactatgcagcaaaa 2184402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 846 - 1018
Target Start/End: Original strand, 2196557 - 2196731
Alignment:
Q  846 tccaaacaggtatatgtccaagtgttggaataggtggtcacatcaggtggaggtggatttggtaccttggttaggaaacatggtctagcagcggatcatg 945  Q
    ||||||||||  |||||||||| ||||||||||| |||||||| || |||||||||||| ||||||||| |||||||||||||||||||||| |||||||    
T  2196557 tccaaacagggttatgtccaagcgttggaataggcggtcacataag-tggaggtggattcggtaccttgtttaggaaacatggtctagcagcagatcatg 2196655  T
Q  946 ttgttgatgcttacataatagatgtaaatggga-aattcttgatag-aaatc-atgggagaggatgttttctgggc 1018  Q
    || ||||||||||| |||||||||||||||| |  |||||| |||| ||||| |||||||| |||||||| |||||    
T  2196656 ttcttgatgcttacctaatagatgtaaatggaaggattcttaatagaaaatcaatgggagaagatgttttttgggc 2196731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 646 - 756
Target Start/End: Original strand, 40880915 - 40881026
Alignment:
Q  646 agactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatg-aaactatt 744  Q
    ||||| ||||||| || |||||||||||||||||||||||  |||||| |||||| ||||| ||| |||||  |||| ||||||||||||| |||| |||    
T  40880915 agactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatt 40881014  T
Q  745 tatagcttatat 756  Q
    ||||||||||||    
T  40881015 tatagcttatat 40881026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 637 - 798
Target Start/End: Original strand, 36646340 - 36646501
Alignment:
Q  637 gcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatg 736  Q
    ||||||||||||||||||| || || ||||| |||| ||||||| ||||| | ||||||||||||| ||| ||||||||| ||||| ||||||| |||||    
T  36646340 gcacttgtaagactatttgggagagcttatggaaaccacttatggcatgtccataagctgttttcatcttatttctataaactctctaggatagcttatg 36646439  T
Q  737 aaa-ctatttatagcttatataaaagtagttttgactttattttatcttctgttataaaaata 798  Q
    ||| | | ||||| ||||||| |||  | || | ||||||||||||||| ||| ||| |||||    
T  36646440 aaaacaagttataacttatatgaaaacaattat-actttattttatcttttgtcatagaaata 36646501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 634 - 732
Target Start/End: Complemental strand, 38971373 - 38971275
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtt 732  Q
    ||||||||||| ||||| | ||||||||||| ||||||||  |||| |||||||||||||||||||||||||| ||| ||| ||||||| | |||||||    
T  38971373 taagcacttgtgagactgtctgagatagtttttgaaaacagtttataacatgttcgtaagctgttttcaacttatttatattagctctctaagatagtt 38971275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 660 - 760
Target Start/End: Complemental strand, 43115145 - 43115044
Alignment:
Q  660 agtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatg-aaactatttatagcttatataa 758  Q
    |||||||| |||||||||||||||||| | |||  |||||||| ||| |||| |||||||||||| ||||||| ||| |||| | |||||||||||||||    
T  43115145 agtttatggaaacaacttatgacatgtccataacttgttttcagcttatttccataagctctcaatgatagttcatgaaaacaacttatagcttatataa 43115046  T
Q  759 aa 760  Q
    ||    
T  43115045 aa 43115044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 664 - 796
Target Start/End: Complemental strand, 1816668 - 1816536
Alignment:
Q  664 tatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatg-aaactatttatagcttatataaaagt 762  Q
    |||||||| |||||||||||| ||| || |||||||||| ||| |||  |||||||||| || |||| ||||| |||| | ||||| |||||| ||||      
T  1816668 tatgaaaataacttatgacattttcataggctgttttcagcttattttgataagctctccagtatagcttatgaaaacaacttatatcttatacaaaaac 1816569  T
Q  763 agttttgactttattttatcttctgttataaaaa 796  Q
    || ||||||||||||||||||| | |||||||||    
T  1816568 ag-tttgactttattttatcttttattataaaaa 1816536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 634 - 739
Target Start/End: Complemental strand, 37273249 - 37273144
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagttt 733  Q
    |||||||| || ||||| |||| || || ||||| |||||||||||||||||| | |||| |||||||||||| |||| ||||| |||| | ||||| ||    
T  37273249 taagcactggtgagactgtttgggagagcttatggaaacaacttatgacatgtccataagttgttttcaacttatttccataagttctccaagatagctt 37273150  T
Q  734 atgaaa 739  Q
    ||||||    
T  37273149 atgaaa 37273144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 637 - 756
Target Start/End: Original strand, 14548679 - 14548799
Alignment:
Q  637 gcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatg 736  Q
    |||||||| ||||| ||||||| || ||||||||||||| |||||||| ||  || |||||||||| ||| |||| |||||||||| || |||  |||||    
T  14548679 gcacttgtgagactgtttgagagagcttatgaaaacaacgtatgacattttaataggctgttttcagcttatttccataagctctccagaataacttatg 14548778  T
Q  737 -aaactatttatagcttatat 756  Q
     |||| | |||||||||||||    
T  14548779 aaaacaacttatagcttatat 14548799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 663 - 760
Target Start/End: Complemental strand, 41724298 - 41724199
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaactt-gtttctataagctctcaaggatagtttatg-aaactatttatagcttatataaaa 760  Q
    ||||| |||||||||||||||||| | |||| |||||||| |||  ||| ||||||||||||||||||| | ||| ||||  ||||||||||||||||||    
T  41724298 ttatggaaacaacttatgacatgtccataagttgttttcagcttattttatataagctctcaaggatagctgatgaaaacagtttatagcttatataaaa 41724199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 646 - 756
Target Start/End: Complemental strand, 21574593 - 21574483
Alignment:
Q  646 agactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaactattt 745  Q
    ||||| |||| || || |||||||||||||||||||||||||| ||||||| ||| | ||| |||| |||||||||| | | ||| |||| |||  | ||    
T  21574593 agactgtttgggagagcttatgaaaacaacttatgacatgttcataagctgcttttagcttatttccataagctctccatgttagcttataaaaaaagtt 21574494  T
Q  746 atagcttatat 756  Q
    |||||||||||    
T  21574493 atagcttatat 21574483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 634 - 719
Target Start/End: Complemental strand, 50004768 - 50004682
Alignment:
Q  634 taagcacttgtaagactatttgagatagt-ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagct 719  Q
    |||||| |||||||||| |||||||  |  ||||| |||||||||||||||||||| ||||||||||||| ||| |||| |||||||    
T  50004768 taagcaattgtaagactgtttgagagggccttatggaaacaacttatgacatgttcttaagctgttttcagcttatttcaataagct 50004682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 669 - 722
Target Start/End: Original strand, 3044249 - 3044302
Alignment:
Q  669 aaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctc 722  Q
    |||||||||||||||||||| ||||||||||||||||| |||  ||||||||||    
T  3044249 aaacaacttatgacatgttcataagctgttttcaacttattttcataagctctc 3044302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 672 - 760
Target Start/End: Original strand, 33725867 - 33725956
Alignment:
Q  672 caacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttat-gaaactatttatagcttatataaaa 760  Q
    ||||||||||||||||  || |||||||||| ||| |||||||||||| || ||||||||||||  ||||  ||||||||||||| ||||    
T  33725867 caacttatgacatgttgatatgctgttttcatcttatttctataagctttccaggatagtttataaaaacagtttatagcttatacaaaa 33725956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 663 - 706
Target Start/End: Complemental strand, 5391965 - 5391922
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaactt 706  Q
    ||||||||||| |||||||||||||| |||||||||||||||||    
T  5391965 ttatgaaaacagcttatgacatgttcataagctgttttcaactt 5391922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 664 - 739
Target Start/End: Original strand, 30923883 - 30923958
Alignment:
Q  664 tatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    |||| ||||| ||||||||||||   ||||||||||||| ||| ||||||||| ||||| ||||||| ||||||||    
T  30923883 tatggaaacagcttatgacatgtctataagctgttttcagcttatttctataaactctctaggataggttatgaaa 30923958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 638 - 700
Target Start/End: Original strand, 2304230 - 2304292
Alignment:
Q  638 cacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgtttt 700  Q
    ||||||| | ||||||||||| |  |||||||| ||||||||||||||||| |||||||||||    
T  2304230 cacttgtgaaactatttgagagaaattatgaaagcaacttatgacatgttcataagctgtttt 2304292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 664 - 710
Target Start/End: Complemental strand, 21754802 - 21754756
Alignment:
Q  664 tatgaaaacaacttatgacatgttcgtaagctgttttcaacttgttt 710  Q
    ||||||||||||||||||||||||| | || ||||||||||||||||    
T  21754802 tatgaaaacaacttatgacatgttcatcagttgttttcaacttgttt 21754756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 673 - 727
Target Start/End: Complemental strand, 25925818 - 25925764
Alignment:
Q  673 aacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaagga 727  Q
    |||||||||||||||| ||||||||||||||||| |||  |||||||||| ||||    
T  25925818 aacttatgacatgttcataagctgttttcaacttattttcataagctctccagga 25925764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 667 - 784
Target Start/End: Complemental strand, 36101650 - 36101533
Alignment:
Q  667 gaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagt-ttatgaaactatttatagcttatataaaagtagt 765  Q
    ||||||| ||||||||||||||  |||||||||||| ||| |||  |||||||||  |||||||| | ||||||| | |||||| |||||  |||  ||     
T  36101650 gaaaacagcttatgacatgttcacaagctgttttcagcttattttcataagctcttcaggatagtataatgaaacaacttatagattatacgaaatcag- 36101552  T
Q  766 tttgactttattttatctt 784  Q
    |||||||||||||||||||    
T  36101551 tttgactttattttatctt 36101533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 667 - 784
Target Start/End: Complemental strand, 36139960 - 36139843
Alignment:
Q  667 gaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagt-ttatgaaactatttatagcttatataaaagtagt 765  Q
    ||||||| ||||||||||||||  |||||||||||| ||| |||  |||||||||  | |||||| | ||||||| | ||||||||||||  |||  ||     
T  36139960 gaaaacagcttatgacatgttcacaagctgttttcagcttattttcataagctcttcaagatagtataatgaaacaacttatagcttatacgaaatcag- 36139862  T
Q  766 tttgactttattttatctt 784  Q
    |||||||||||||||||||    
T  36139861 tttgactttattttatctt 36139843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 674 - 756
Target Start/End: Original strand, 53848058 - 53848140
Alignment:
Q  674 acttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaactatttatagcttatat 756  Q
    |||| |||||||| | ||||||||||||  ||| |||||||||||||||  ||||||||||||||| ||  | ||||||||||    
T  53848058 acttgtgacatgtccataagctgttttcggcttatttctataagctctctgggatagtttatgaaaataactgtagcttatat 53848140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 678 - 798
Target Start/End: Complemental strand, 40665500 - 40665380
Alignment:
Q  678 atgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaactat-ttatagcttatataaaagtagttttgactttat 776  Q
    ||||||||||| ||||||||||||| ||| ||| ||||||||||| | ||||  ||||||||  || ||||| |||| | |||| || |||| | ||||     
T  40665500 atgacatgttcataagctgttttcagcttatttttataagctctccaagataacttatgaaaacatcttataacttacacaaaaataatttt-attttag 40665402  T
Q  777 tttatcttctgttataaaaata 798  Q
    |||||||||| |||||||||||    
T  40665401 tttatcttctattataaaaata 40665380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 662 - 719
Target Start/End: Complemental strand, 42745125 - 42745068
Alignment:
Q  662 tttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagct 719  Q
    |||||| |||||||||||||||||||| |||| |||||||| ||| |||| |||||||    
T  42745125 tttatgtaaacaacttatgacatgttcataagttgttttcatcttatttccataagct 42745068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 663 - 723
Target Start/End: Original strand, 3015827 - 3015887
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctca 723  Q
    |||||||||||||||||||||||| | |||| |||||||| ||| |||  |||||||||||    
T  3015827 ttatgaaaacaacttatgacatgtccataagatgttttcatcttattttaataagctctca 3015887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 663 - 739
Target Start/End: Original strand, 39602194 - 39602270
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    ||||||| ||| |||||||||||||| |||  |||||||||||| |||  ||||| |||||| ||||| ||||||||    
T  39602194 ttatgaagacagcttatgacatgttcataaattgttttcaacttattttcataagttctcaaagatagcttatgaaa 39602270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 667 - 735
Target Start/End: Complemental strand, 50952415 - 50952347
Alignment:
Q  667 gaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttat 735  Q
    ||||||| |||||||||||||| ||| ||||||| | ||| |||| |||||||||| | ||||||||||    
T  50952415 gaaaacagcttatgacatgttcataaactgttttaagcttatttccataagctctccaagatagtttat 50952347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 666 - 706
Target Start/End: Original strand, 53762381 - 53762421
Alignment:
Q  666 tgaaaacaacttatgacatgttcgtaagctgttttcaactt 706  Q
    |||||||| |||||||||||||| |||||||||||||||||    
T  53762381 tgaaaacagcttatgacatgttcataagctgttttcaactt 53762421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 638 - 717
Target Start/End: Complemental strand, 1810088 - 1810009
Alignment:
Q  638 cacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataag 717  Q
    ||||||| ||||||||||||| || ||| | |||||||||||||||||| | | || |||||||  ||| ||||||||||    
T  1810088 cacttgtgagactatttgagagagcttacggaaacaacttatgacatgtccatgagttgttttctgcttatttctataag 1810009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 749 - 820
Target Start/End: Original strand, 20173959 - 20174029
Alignment:
Q  749 gcttatataaaagtagttttgactttattttatcttctgttataaaaataaccagtacataaacatttatat 820  Q
    ||||||||||||| ||||| ||||| |||||||||| ||||||| ||||||| | ||||||| || ||||||    
T  20173959 gcttatataaaagaagtttggactt-attttatcttttgttatagaaataactaatacataagcacttatat 20174029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 636 - 735
Target Start/End: Complemental strand, 36200209 - 36200110
Alignment:
Q  636 agcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttat 735  Q
    ||||||||| ||| | || |||| ||||| || |||||||||||||||||| | |||| |||||||| ||| |||| || ||||||  ||||||| ||||    
T  36200209 agcacttgtgagaatgttggagagagtttttgtaaacaacttatgacatgtccataagttgttttcagcttatttccatgagctctacaggatagcttat 36200110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 663 - 702
Target Start/End: Complemental strand, 45541657 - 45541618
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttca 702  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  45541657 ttatgaaaacagcttatgacatgttcataagctgttttca 45541618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 642 - 717
Target Start/End: Complemental strand, 47132101 - 47132026
Alignment:
Q  642 tgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataag 717  Q
    ||||||||||||||||| |  |||||||||||||||||| ||| | | ||| ||||||||| ||| ||| ||||||    
T  47132101 tgtaagactatttgagagaacttatgaaaacaacttatgtcatatccataaactgttttcagcttatttttataag 47132026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 662 - 756
Target Start/End: Complemental strand, 11253588 - 11253494
Alignment:
Q  662 tttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaactatttatagcttatat 756  Q
    ||||| ||||||||||||||||| |   ||| ||||||||| | | ||||  ||||||||| ||||||| |||||||||   |||||||||||||    
T  11253588 tttataaaaacaacttatgacatatctataaactgttttcagcctatttccctaagctctctaggatagcttatgaaacagcttatagcttatat 11253494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 636 - 702
Target Start/End: Complemental strand, 24624323 - 24624257
Alignment:
Q  636 agcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttca 702  Q
    ||||||||||||||| ||||  | || ||||||||||| |||||||||||| | ||| |||||||||    
T  24624323 agcacttgtaagactgtttggaagagcttatgaaaacagcttatgacatgtccataaactgttttca 24624257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 634 - 684
Target Start/End: Original strand, 25182942 - 25182992
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaacttatgacat 684  Q
    |||| |||||| ||||| ||||||| || ||||||||||||||||||||||    
T  25182942 taagaacttgtgagactgtttgagagagcttatgaaaacaacttatgacat 25182992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 669 - 739
Target Start/End: Original strand, 26808185 - 26808255
Alignment:
Q  669 aaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    |||||||||||||||||||  ||| ||||||| | ||| |||||| | ||| || ||||||||||||||||    
T  26808185 aaacaacttatgacatgtttataaactgttttgagcttatttctacatgctttctaggatagtttatgaaa 26808255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 690 - 827
Target Start/End: Complemental strand, 27792931 - 27792794
Alignment:
Q  690 taagctgttttcaacttgtttctataagctctcaaggatagtttatg-aaactatttatagcttatataaaagtagttttgactttattttatcttctgt 788  Q
    |||| |||||||| ||| ||||||||||||||  | ||||||||||| |||| | ||  ||||||||| ||| ||| |||||| |||||||||||| |||    
T  27792931 taagttgttttcagcttatttctataagctctacatgatagtttatgaaaacaacttgcagcttatatgaaaatag-tttgaccttattttatcttttgt 27792833  T
Q  789 tataaaaataaccagtacataaacatttatatgataaac 827  Q
    | |  ||||| |   ||||||| || |||||||||||||    
T  27792832 ttttgaaatagcttatacataagcacttatatgataaac 27792794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 669 - 739
Target Start/End: Complemental strand, 31010482 - 31010412
Alignment:
Q  669 aaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    |||||||||||||||||| | ||||||||||||| |||  ||| |||||||||| | ||||| ||| ||||    
T  31010482 aaacaacttatgacatgtccataagctgttttcagcttaattccataagctctctatgataggttacgaaa 31010412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 669 - 722
Target Start/End: Original strand, 20192596 - 20192649
Alignment:
Q  669 aaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctc 722  Q
    ||||| |||||||||||| | ||||||||||||||||  |||| ||||||||||    
T  20192596 aaacagcttatgacatgtccataagctgttttcaactcatttccataagctctc 20192649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 634 - 707
Target Start/End: Complemental strand, 27787126 - 27787053
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttg 707  Q
    ||||||||||| ||||| |||  || || ||||||||||  ||||| |||||||| ||||||||||||| ||||    
T  27787126 taagcacttgttagactttttaggaaagcttatgaaaacggcttatcacatgttcataagctgttttcagcttg 27787053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 665 - 702
Target Start/End: Complemental strand, 30750084 - 30750047
Alignment:
Q  665 atgaaaacaacttatgacatgttcgtaagctgttttca 702  Q
    |||||||||||||||||||||| | |||||||||||||    
T  30750084 atgaaaacaacttatgacatgtccataagctgttttca 30750047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 663 - 700
Target Start/End: Original strand, 39723384 - 39723421
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgtttt 700  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  39723384 ttatgaaaacagcttatgacatgttcataagctgtttt 39723421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 690 - 739
Target Start/End: Original strand, 44284091 - 44284140
Alignment:
Q  690 taagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    |||||| |||||| ||| ||||||||||||||| ||||||| ||||||||    
T  44284091 taagctattttcagcttatttctataagctctccaggatagcttatgaaa 44284140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 634 - 679
Target Start/End: Complemental strand, 50211850 - 50211805
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaacttat 679  Q
    ||||||||||||||||| ||||||| |  |||||||||||||||||    
T  50211850 taagcacttgtaagactgtttgagagaacttatgaaaacaacttat 50211805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 662 - 739
Target Start/End: Original strand, 54837017 - 54837094
Alignment:
Q  662 tttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    |||||||||||| |||||||||||||| |||  |||||||  ||| ||| |||||||| || | ||||| ||||||||    
T  54837017 tttatgaaaacagcttatgacatgttcataacttgttttccgcttatttttataagctgtccaagatagcttatgaaa 54837094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 312; Significance: 1e-175; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 312; E-Value: 1e-175
Query Start/End: Original strand, 84 - 586
Target Start/End: Original strand, 35556549 - 35557044
Alignment:
Q  84 agatggcttatcttgcagtgtttctgatactatctctttcaatctcttgtgcttcttctacttcagttgagaaaaatttcatgcagtgcatgttaaccat 183  Q
    |||||| |||||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||| ||| ||    
T  35556549 agatggattatcttgtagtgtttctgtt-ctatctctttcaatctcttgtgcttcttctacttcagttgaggagagtttcatgcagtgcatgtcaacaat 35556647  T
Q  184 aggtagtagcttttctgaatccagtgaaaacacactgtttatcaactcatcctccatattgtttccacaagtattggaatcagtgaaacaaaatccaaga 283  Q
    || ||||| || ||||||||||| |||||| ||| ||||||||||||||||||      ||| ||||||||| ||||||||| |||||||||||||||||    
T  35556648 agttagtaactattctgaatccactgaaaaaacagtgtttatcaactcatcct------tgtatccacaagtgttggaatcattgaaacaaaatccaaga 35556741  T
Q  284 tgggtgaactcatcaagcaaacctcttctcattatgacaccttcccatgaatcagaaattcaagaagccatactatgcagcaaaaagattggtgtgcaga 383  Q
    ||| |||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||    
T  35556742 tggctgaattcatcaagcaagcctcttctcattatgacaccttcccatgaataagaaattcaaggagccatactatgcagcaaagagattggtgtgcaga 35556841  T
Q  384 ttagagtggttagtggtggccatgattatgaaggactatcttatctttgtaaggcaccctttatcatgattgatctcatcaacatccgtaagttcgacat 483  Q
    |||| || |||||||||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||  | |||||||    
T  35556842 ttagggttgttagtggtaaccatgattatgaaggaatatcttatctttgtaagacaccctttatcatgattgatctcatcaacatccgttcgatcgacat 35556941  T
Q  484 taatcttgccgaggaatctgcttggattcaggcaggtgcaacattaggtgaactttactataaaatctccaaagcaagtaaagttcatgcattccctgca 583  Q
    |||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| || ||| ||||||||||| ||||||| ||    
T  35556942 taatcttgccgatgaatctgcttggattcaggctggtgcaacattaagtgaactttactataaaatctccgaaacaaataaagttcatggattcccttca 35557041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 242 - 580
Target Start/End: Original strand, 35538267 - 35538605
Alignment:
Q  242 ttgtttccacaagtattggaatcagtgaaacaaaatccaagatgggtgaactcatcaagcaaacctcttctcattatgacaccttcccatgaatcagaaa 341  Q
    |||| ||||||||| ||||||||| |||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  35538267 ttgtatccacaagtgttggaatcattgaaacaaaatccaagatggctgaattcatcaagcaagcctcttctcattatgacaccttcccatgaataagaaa 35538366  T
Q  342 ttcaagaagccatactatgcagcaaaaagattggtgtgcagattagagtggttagtggtggccatgattatgaaggactatcttatctttgtaaggcacc 441  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  35538367 ttcaaggagccatactatgcagcaaagagattggtgtgcagattagggttgttagtggtggccatgattatgaaggattatcttatctttgtaagacacc 35538466  T
Q  442 ctttatcatgattgatctcatcaacatccgtaagttcgacattaatcttgccgaggaatctgcttggattcaggcaggtgcaacattaggtgaactttac 541  Q
    |||||||||||||||||||||||||||||||  | ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  35538467 ctttatcatgattgatctcatcaacatccgttcgatcgacattaatcttgccgatgaatctgcttggattcaggctggtgcaacattaggtgaactttac 35538566  T
Q  542 tataaaatctccaaagcaagtaaagttcatgcattccct 580  Q
    |||||||||||| || ||| ||||||||||| |||||||    
T  35538567 tataaaatctccgaaacaaataaagttcatggattccct 35538605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 846 - 959
Target Start/End: Original strand, 35557276 - 35557388
Alignment:
Q  846 tccaaacaggtatatgtccaagtgttggaataggtggtcacatcaggtggaggtggatttggtaccttggttaggaaacatggtctagcagcggatcatg 945  Q
    ||||||||||  |||||||||| |||||||||||  |||| ||||| |||||||||||||||||||||| ||||||| |||||||||||||| ||||||     
T  35557276 tccaaacagggttatgtccaagcgttggaataggcagtcaaatcag-tggaggtggatttggtaccttgtttaggaagcatggtctagcagcagatcatc 35557374  T
Q  946 ttgttgatgcttac 959  Q
    ||||||||||||||    
T  35557375 ttgttgatgcttac 35557388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 892 - 976
Target Start/End: Original strand, 35538870 - 35538954
Alignment:
Q  892 gtggaggtggatttggtaccttggttaggaaacatggtctagcagcggatcatgttgttgatgcttacataatagatgtaaatgg 976  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||| |||||||| |||||||||||| | ||||||||||||||    
T  35538870 gtggaggtggatttggtaccttgtttaggaagcatggtctagcagcagatcatgtcgttgatgcttaccttatagatgtaaatgg 35538954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 670 - 800
Target Start/End: Original strand, 1939323 - 1939453
Alignment:
Q  670 aacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaactatttatagct-tatataaaagtagtttt 768  Q
    ||||||||||||||||| | ||||||||||||||||| |||| |||||||||| || |||| ||||||||  | ||||||||  |||| ||| ||| |||    
T  1939323 aacaacttatgacatgtccataagctgttttcaacttatttccataagctctccagtatagcttatgaaaacagttatagctcaatatgaaaatag-ttt 1939421  T
Q  769 gactttattttatcttctgttataaaaataac 800  Q
     ||||||||||||||| ||||||| |||||||    
T  1939422 cactttattttatcttttgttatagaaataac 1939453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 663 - 798
Target Start/End: Complemental strand, 28933909 - 28933775
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatg-aaactatttatagcttatataaaag 761  Q
    |||||||||||||||||| ||||||| || |||||||||||||| ||||||| ||||||| ||||||| ||||| |||| ||||||| |||| || |||     
T  28933909 ttatgaaaacaacttatggcatgttcata-gctgttttcaacttatttctatcagctctctaggatagcttatgaaaacaatttataacttaaatgaaaa 28933811  T
Q  762 tagttttgactttattttatcttctgttataaaaata 798  Q
    ||  ||||| || |||||||||| ||||||| |||||    
T  28933810 ta-atttgatttgattttatcttttgttatataaata 28933775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 632 - 798
Target Start/End: Complemental strand, 32821926 - 32821760
Alignment:
Q  632 cgtaagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagt 731  Q
    |||||||| ||| |||||| ||||  | |||||||  |||||||||||||||||| | |||||||||||||  || ||||||||||||||  |||||||     
T  32821926 cgtaagcatttgcaagactgtttggaagagtttatagaaacaacttatgacatgtccataagctgttttcagtttatttctataagctctttaggatagc 32821827  T
Q  732 ttatg-aaactatttatagcttatataaaagtagttttgac-tttattttatcttctgttataaaaata 798  Q
    ||||| ||||  ||||||||| | |||||| || || |||| ||||||||||||| |||||||||||||    
T  32821826 ttatgaaaacagtttatagctcaaataaaa-ta-ttatgacttttattttatcttttgttataaaaata 32821760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 634 - 825
Target Start/End: Complemental strand, 9478414 - 9478223
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagttt 733  Q
    |||| ||||||  |||| ||||||| |||||||| ||||||||||| |||||| | ||||||||||||| |||  ||| || | ||||| | ||||| ||    
T  9478414 taagtacttgtgtgactgtttgagagagtttatgcaaacaacttattacatgtccataagctgttttcatcttacttccatcaactctccacgatagctt 9478315  T
Q  734 atgaa-actatttatagcttatataaaagtagttttgactttattttatcttctgttataaaaataaccagtacataaacatttatatgataa 825  Q
    | ||| ||    |||||||||||| ||| || |||||| |||||||||||| |||||||| ||||| |   |||||||||| |||||||||||    
T  9478314 acgaacacagcatatagcttatatgaaaata-ttttgagtttattttatctactgttatagaaatagcttatacataaacacttatatgataa 9478223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 663 - 828
Target Start/End: Original strand, 18962021 - 18962187
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttg-tttctataagctctcaaggatagtttatgaaacta-tttatagcttatataaaa 760  Q
    ||||||||||| | |||||||||||| |  |||||||||| |||  |||| |||  ||||| | ||||| |||||||| || |||||||||||||| |||    
T  18962021 ttatgaaaacagcatatgacatgttcatgtgctgttttcagctttatttccatagtctctccatgatagcttatgaaaatagtttatagcttatatgaaa 18962120  T
Q  761 gtagttttgactttattttatcttctgttataaaaataaccagtacataaacatttatatgataaaca 828  Q
      |||||  ||||||||||||||| ||||||||||||| | | ||||||| || ||| ||||||||||    
T  18962121 acagttta-actttattttatcttttgttataaaaatagctaatacataagcacttacatgataaaca 18962187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 669 - 739
Target Start/End: Original strand, 34652026 - 34652096
Alignment:
Q  669 aaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    |||||||||||||||||| | ||||||||||||||||| |||| |||||||||| | ||||| ||||||||    
T  34652026 aaacaacttatgacatgtccataagctgttttcaacttatttccataagctctccaagatagcttatgaaa 34652096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 662 - 739
Target Start/End: Complemental strand, 41817255 - 41817178
Alignment:
Q  662 tttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    |||||||||||| |||||||||||||  |||  |||||||| ||| |||| |||||||||| ||||||||||||||||    
T  41817255 tttatgaaaacatcttatgacatgttgataatttgttttcagcttatttccataagctctccaggatagtttatgaaa 41817178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 638 - 721
Target Start/End: Complemental strand, 43985320 - 43985237
Alignment:
Q  638 cacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctct 721  Q
    ||||||||| ||| ||||||| || |||   |||||||||||||||||| | |||||| ||||||||||||||| |||||||||    
T  43985320 cacttgtaaaactgtttgagagagattactgaaacaacttatgacatgtccataagcttttttcaacttgtttccataagctct 43985237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 663 - 756
Target Start/End: Complemental strand, 10285946 - 10285852
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatg-aaactatttatagcttatat 756  Q
    ||||||||| |||||||||||||| | ||||||||||||||||| |||| ||||| |||| | | ||| ||||| |||| | |||||||||||||    
T  10285946 ttatgaaaataacttatgacatgtccataagctgttttcaacttatttccataagttctctatgttagcttatgcaaacgacttatagcttatat 10285852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 634 - 795
Target Start/End: Original strand, 12313128 - 12313289
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagttt 733  Q
    ||||||||||| ||| | |||| || | |||||||||||| |||||| ||||||| |||| || ||||| ||| |||  |||||||||| | ||||| ||    
T  12313128 taagcacttgtgagattgtttgggagaatttatgaaaacagcttatgccatgttcataagttgatttcaccttattttcataagctctccaagatagctt 12313227  T
Q  734 atg-aaactatttatagcttatataaaagtagttttgactttattttatcttctgttataaaa 795  Q
    ||| |||| |||| ||||||| | |||| ||  ||| ||||||||||||||| ||| ||||||    
T  12313228 atgtaaacaatttgtagcttaaacaaaaata-atttaactttattttatcttttgtgataaaa 12313289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 639 - 689
Target Start/End: Complemental strand, 43808668 - 43808618
Alignment:
Q  639 acttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcg 689  Q
    |||||||||||||||||||| || ||||||||| |||||||||||||||||    
T  43808668 acttgtaagactatttgagagagcttatgaaaataacttatgacatgttcg 43808618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 663 - 798
Target Start/End: Original strand, 9878666 - 9878801
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatg-aaactatttatagcttatataaaag 761  Q
    ||||| |||||||||||||||||| | |||| ||||||| |||| |||||  ||||||||  ||||||   ||| |||| | ||||||| ||| |||||     
T  9878666 ttatggaaacaacttatgacatgtccataagttgttttcgacttatttcttcaagctctccgggatagcgaatgaaaacaacttatagcatatgtaaaaa 9878765  T
Q  762 tagttttgactttattttatcttctgttataaaaata 798  Q
    ||| ||||| ||||||||||||| ||||||| |||||    
T  9878766 tag-tttgagtttattttatcttttgttatagaaata 9878801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 634 - 756
Target Start/End: Original strand, 30552598 - 30552722
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagct-gttttcaacttgtttctataagctctcaaggatagtt 732  Q
    ||||||||| | | ||| |||||||||| ||||  ||||||||||||||||||   |||| | ||||| | ||| |||| |||||||||| |||||||||    
T  30552598 taagcacttttgaaactgtttgagataggttatcgaaacaacttatgacatgtcaataagttggtttttagcttatttccataagctctctaggatagtt 30552697  T
Q  733 tatgaaact-atttatagcttatat 756  Q
    ||||||| | |||||||||| ||||    
T  30552698 tatgaaaataatttatagctgatat 30552722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 663 - 722
Target Start/End: Complemental strand, 1647322 - 1647263
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctc 722  Q
    ||||||||||| ||||||||||| || ||||||||||||| ||| |||| ||||||||||    
T  1647322 ttatgaaaacagcttatgacatgctcataagctgttttcagcttatttccataagctctc 1647263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 664 - 798
Target Start/End: Complemental strand, 25790211 - 25790077
Alignment:
Q  664 tatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttat-gaaactatttatagcttatataaaagt 762  Q
    |||| ||||| ||||| |||||||| ||||||||||| ||||| |||  |||||||||| ||||||| ||||  |||| |||| |||||||||| |||      
T  25790211 tatggaaacagcttattacatgttcctaagctgttttgaacttattttcataagctctccaggatagattatccaaacaatttgtagcttatatgaaaac 25790112  T
Q  763 agttttgactttattttatcttctgttataaaaata 798  Q
    || |||||||| | |||||||| | ||||| |||||    
T  25790111 ag-tttgacttcactttatctttttttatagaaata 25790077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 662 - 799
Target Start/End: Original strand, 22681168 - 22681305
Alignment:
Q  662 tttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatg-aaactatttatagcttatataaaa 760  Q
    ||||||||||||||  || |||||||| ||||||||||| | ||| |||| ||||| |||| ||||||| ||||| ||||   ||||||||||||| |||    
T  22681168 tttatgaaaacaacaaataacatgttcataagctgtttttagcttatttccataagttctctaggatagattatgaaaacagcttatagcttatatgaaa 22681267  T
Q  761 gtagttttgactttattttatcttctgttataaaaataa 799  Q
      |  |||| |||| ||||||||| |||| |||||||||    
T  22681268 aca-atttggctttgttttatcttttgttttaaaaataa 22681305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 646 - 739
Target Start/End: Original strand, 1741999 - 1742092
Alignment:
Q  646 agactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    |||||||||| || || ||||| |||||||||||||||||| | |||||| | |||||||| |||| |||| ||||  | ||||| ||||||||    
T  1741999 agactatttgggagagcttatggaaacaacttatgacatgtgcataagctatcttcaacttatttccataaactcttcatgatagattatgaaa 1742092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 631 - 684
Target Start/End: Original strand, 27699481 - 27699534
Alignment:
Q  631 gcgtaagcacttgtaagactatttgagatagtttatgaaaacaacttatgacat 684  Q
    ||||||| | |||| ||||| ||||||| |||||||||||||||||||||||||    
T  27699481 gcgtaagtatttgtgagactgtttgagagagtttatgaaaacaacttatgacat 27699534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 663 - 740
Target Start/End: Complemental strand, 33192288 - 33192211
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaac 740  Q
    |||||||||||  ||||||||| | | ||||||||||||| ||| | | ||||||||||| ||||||| |||||||||    
T  33192288 ttatgaaaacagtttatgacatatccataagctgttttcagcttatatttataagctctccaggatagcttatgaaac 33192211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 634 - 739
Target Start/End: Original strand, 43965077 - 43965181
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagttt 733  Q
    ||||||||||| ||||||||||| |||||||||||||| | ||||| |||||||| ||| || ||| |||||| || |  ||||||||| || |||  ||    
T  43965077 taagcacttgtcagactatttgatatagtttatgaaaa-agcttattacatgttcataacctatttacaacttattgccgtaagctctctagaataactt 43965175  T
Q  734 atgaaa 739  Q
    ||||||    
T  43965176 atgaaa 43965181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 663 - 715
Target Start/End: Original strand, 5902533 - 5902585
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctata 715  Q
    ||||||||||| |||||||||||||| ||| ||||||||| ||||||| ||||    
T  5902533 ttatgaaaacagcttatgacatgttcataaactgttttcagcttgtttttata 5902585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 663 - 739
Target Start/End: Complemental strand, 33941995 - 33941919
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    ||||||||||||||||||||| |||| ||||||| ||||||||| ||   |||| ||||| | ||||| ||||||||    
T  33941995 ttatgaaaacaacttatgacaagttcataagctgctttcaacttattatcataaactctccaagatagcttatgaaa 33941919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 663 - 739
Target Start/End: Original strand, 43065434 - 43065510
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    |||||||||||||||||||||||| | |||  |||||||| ||| |||| |||||||||| | ||||  ||||||||    
T  43065434 ttatgaaaacaacttatgacatgtccataaattgttttcagcttatttcaataagctctccacgataacttatgaaa 43065510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 666 - 721
Target Start/End: Original strand, 1056116 - 1056171
Alignment:
Q  666 tgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctct 721  Q
    ||||||||||||||||||||||| | || |||||||| |||||||  |||||||||    
T  1056116 tgaaaacaacttatgacatgttcattagttgttttcagcttgttttcataagctct 1056171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 634 - 729
Target Start/End: Complemental strand, 13234621 - 13234526
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggata 729  Q
    ||||||||||||||||| |||||||  | |||  ||||||  ||||||||||| | |||| |||||||||||| | |  ||||||| |||||||||    
T  13234621 taagcacttgtaagactgtttgagagtgcttacaaaaacacattatgacatgtccataagttgttttcaacttatcttcataagctatcaaggata 13234526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 634 - 784
Target Start/End: Complemental strand, 35486032 - 35485882
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagttt 733  Q
    |||| |||||| ||||| ||||||| |  |||  ||| |||||||||| |||||| ||||||||||||| ||  |||| ||| |||||  ||||||| ||    
T  35486032 taagaacttgtgagactgtttgagagaacttactaaagcaacttatgatatgttcataagctgttttcagctcatttccataggctcttcaggatagctt 35485933  T
Q  734 at-gaaactatttatagcttatataaaagtagttttgactttattttatctt 784  Q
    ||  |||| | ||||||||||||   || ||| |||||||||||||||||||    
T  35485932 ataaaaacaacttatagcttataatgaaatag-tttgactttattttatctt 35485882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 639 - 722
Target Start/End: Complemental strand, 37034132 - 37034049
Alignment:
Q  639 acttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctc 722  Q
    |||||| ||||||||||  | || ||||| ||||| |||| ||||||||  |||  |||||||||||| |||||||||||||||    
T  37034132 acttgtgagactatttgttagagattatggaaacagcttaagacatgtttataaattgttttcaacttatttctataagctctc 37034049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 746 - 828
Target Start/End: Complemental strand, 3102695 - 3102614
Alignment:
Q  746 atagcttatataaaagtagttttgactttattttatcttctgttataaaaataaccagtacataaacatttatatgataaaca 828  Q
    |||| |||||||||| |||||| ||||||||||||| || || |||||||||| |   ||||||| || ||||||||||||||    
T  3102695 atagattatataaaaatagttt-gactttattttatattttgctataaaaatagcttatacataagcagttatatgataaaca 3102614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 766 - 800
Target Start/End: Complemental strand, 3458640 - 3458606
Alignment:
Q  766 tttgactttattttatcttctgttataaaaataac 800  Q
    ||||||||||||||||||| |||||||||||||||    
T  3458640 tttgactttattttatcttttgttataaaaataac 3458606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 663 - 729
Target Start/End: Original strand, 11344754 - 11344819
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggata 729  Q
    ||||| |||||||||||||||||| | ||| ||||||||||||||| || ||||| |||| ||||||    
T  11344754 ttatggaaacaacttatgacatgtccataaactgttttcaacttgtatc-ataagatctccaggata 11344819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 634 - 716
Target Start/End: Original strand, 28039287 - 28039369
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataa 716  Q
    |||||||||||  |||| || |||  | ||||||||||||| ||||||| ||||| ||||||||||||| ||| |||| ||||    
T  28039287 taagcacttgtgtgactgttcgagtgaatttatgaaaacaagttatgacttgttcataagctgttttcagcttatttccataa 28039369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 766 - 824
Target Start/End: Original strand, 33576681 - 33576739
Alignment:
Q  766 tttgactttattttatcttctgttataaaaataaccagtacataaacatttatatgata 824  Q
    |||||||||||| |||||| ||||||| ||||||||  ||||||| ||||||| |||||    
T  33576681 tttgactttattgtatcttttgttatagaaataacctatacataagcatttatgtgata 33576739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 671 - 784
Target Start/End: Complemental strand, 33942228 - 33942115
Alignment:
Q  671 acaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatg-aaactatttatagcttatataaaagtagttttg 769  Q
    |||||||||||||||||| ||||||||||||| ||  |||  || ||||||| | ||| | ||||| |||| | |||||||||| || |||  || ||||    
T  33942228 acaacttatgacatgttcataagctgttttcagctaattttcattagctctctatgatggcttatgaaaacaacttatagcttacatgaaaacag-tttg 33942130  T
Q  770 actttattttatctt 784  Q
    |||||||||||||||    
T  33942129 actttattttatctt 33942115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 635 - 737
Target Start/End: Complemental strand, 43811224 - 43811123
Alignment:
Q  635 aagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagttta 734  Q
    |||||||||| | ||| ||||||| |  ||||| |||||||||||| |||| || ||||||||||||| |||  ||| |||| ||||| ||||||| |||    
T  43811224 aagcacttgtgatactgtttgagaaaccttatggaaacaacttatggcatggtcataagctgttttcagcttagttc-ataacctctctaggatagctta 43811126  T
Q  735 tga 737  Q
    |||    
T  43811125 tga 43811123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 634 - 739
Target Start/End: Complemental strand, 787447 - 787342
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagttt 733  Q
    ||||||||||| | ||| |||| || |  ||||||||||| |||||||||||| | ||||||||||||| ||| | || |||| |  || | ||||||||    
T  787447 taagcacttgtgacactgtttgtgagaacttatgaaaacagcttatgacatgtccataagctgttttcagcttatctccataaaccatctaagatagttt 787348  T
Q  734 atgaaa 739  Q
    ||||||    
T  787347 atgaaa 787342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 713 - 825
Target Start/End: Original strand, 28803540 - 28803652
Alignment:
Q  713 ataagctctcaaggatagtttatgaaa-ctatttatagcttatataaaagtagttttgactttattttatcttctgttataaaaataaccagtacataaa 811  Q
    |||||||||| ||||||||||| |||| | | || |||||||||| |||  ||||| |||||||||||||||| ||||||  |||||||   || ||||     
T  28803540 ataagctctccaggatagtttaagaaaacaacttgtagcttatatgaaatcagttt-gactttattttatcttttgttatcgaaataacttatatataag 28803638  T
Q  812 catttatatgataa 825  Q
    || |||||||||||    
T  28803639 cacttatatgataa 28803652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 766 - 827
Target Start/End: Original strand, 35252209 - 35252270
Alignment:
Q  766 tttgactttattttatcttctgttataaaaataaccagtacataaacatttatatgataaac 827  Q
    ||||||||||||||||||| | ||| |  ||||||   ||||||||||||||||||||||||    
T  35252209 tttgactttattttatcttttattaaaggaataacatatacataaacatttatatgataaac 35252270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 638 - 711
Target Start/End: Original strand, 43456666 - 43456739
Alignment:
Q  638 cacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttc 711  Q
    ||||||||||||| ||||| | || || ||||||||||| ||||||||| | ||| ||||||||| ||| ||||    
T  43456666 cacttgtaagactgtttgaaagagcttgtgaaaacaactcatgacatgtccataaactgttttcagcttatttc 43456739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 3e-23; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 663 - 795
Target Start/End: Complemental strand, 30523745 - 30523614
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaactatttatagcttatataaaagt 762  Q
    ||||| |||||||||||| ||||||| ||||||||||||||||  ||||||||| ||||||||||||| ||||||||  | |||||||||||||  |||     
T  30523745 ttatggaaacaacttatgccatgttcataagctgttttcaactaatttctataacctctcaaggatagcttatgaaaaaacttatagcttatat-gaaga 30523647  T
Q  763 agttttgactttattttatcttctgttataaaa 795  Q
     | |||||| |||||||||| | ||||||||||    
T  30523646 cgatttgacattattttatcatttgttataaaa 30523614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 669 - 784
Target Start/End: Complemental strand, 4420723 - 4420610
Alignment:
Q  669 aaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaactatttatagcttatataaaagtagtttt 768  Q
    |||||| ||||||||||||| ||||||||||||| ||| |||| |||||||||| | ||||| ||| |||| ||  | ||||||||| |||| ||| |||    
T  4420723 aaacaaattatgacatgttcataagctgttttcagcttatttccataagctctccaagatagcttaggaaaataact-tagcttatacaaaaatag-ttt 4420626  T
Q  769 gactttattttatctt 784  Q
    ||||||||||||||||    
T  4420625 gactttattttatctt 4420610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 634 - 798
Target Start/End: Complemental strand, 1403111 - 1402947
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagttt 733  Q
    ||||||||||| ||||| | || || |||||||  |||||||||||||||| |   ||| || | |||| ||  |||||||||| |||| | ||||| ||    
T  1403111 taagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagctt 1403012  T
Q  734 atgaaa-ctatttatagcttatataaaagtagttttgactttattttatcttctgttataaaaata 798  Q
    |||||| | ||||||||||||||| ||| ||||||  ||||||||||||||| ||||||| |||||    
T  1403011 atgaaaacaatttatagcttatatgaaaatagttta-actttattttatcttttgttatagaaata 1402947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 637 - 734
Target Start/End: Original strand, 1669756 - 1669853
Alignment:
Q  637 gcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagttta 734  Q
    ||||||||||||||| ||| || || ||||||||||||||||||||||||   ||||||||||||| ||  |||| | |||| ||| |||||||||||    
T  1669756 gcacttgtaagactaattgggagagcttatgaaaacaacttatgacatgtctataagctgttttcagctcatttcgacaagccctctaggatagttta 1669853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 648 - 713
Target Start/End: Complemental strand, 4081017 - 4080952
Alignment:
Q  648 actatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttcta 713  Q
    ||||||||||| | ||||||||||||||||||| ||||||| |||| |||||||||||| ||||||    
T  4081017 actatttgagagattttatgaaaacaacttatgccatgttcataagttgttttcaacttatttcta 4080952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 634 - 703
Target Start/End: Original strand, 27693394 - 27693463
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaa 703  Q
    |||| |||||| ||||||||||||| | |||||| |||||||||||||||||||| |||||| |||||||    
T  27693394 taagtacttgtgagactatttgagagaatttatggaaacaacttatgacatgttcataagctattttcaa 27693463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 634 - 722
Target Start/End: Original strand, 2460106 - 2460194
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctc 722  Q
    |||| |||||| ||||| ||||||| || ||||| ||||||||||||||||||   |||| |||||||||||| |||| ||||||||||    
T  2460106 taagtacttgtgagactgtttgagagagcttatggaaacaacttatgacatgtctttaagttgttttcaacttatttccataagctctc 2460194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 660 - 798
Target Start/End: Original strand, 2027387 - 2027525
Alignment:
Q  660 agtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatga-aactatttatagcttatataa 758  Q
    |||||||||||||| |||||||||| | | ||||||||||||| ||| ||| | ||| ||||  | | ||| |||||| |||   |||||| |||||| |    
T  2027387 agtttatgaaaacagcttatgacatttccataagctgttttcagcttatttatttaaactctacatgctagcttatgagaacagcttataggttatatga 2027486  T
Q  759 aagtagttttgactttattttatcttctgttataaaaata 798  Q
    || |||||| |||||||||||||||| |||||||||||||    
T  2027487 aaatagttt-gactttattttatcttttgttataaaaata 2027525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 641 - 739
Target Start/End: Original strand, 20368142 - 20368240
Alignment:
Q  641 ttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    ||||||||||||||| || |  |||||||||||||||||||||||||| ||||||  ||||||||| |||  ||||| |||| | || || ||||||||    
T  20368142 ttgtaagactatttgggagaacttatgaaaacaacttatgacatgttcataagctagtttcaacttattttcataagttctccaagaaagcttatgaaa 20368240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 669 - 722
Target Start/End: Original strand, 9667975 - 9668028
Alignment:
Q  669 aaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctc 722  Q
    |||||||||||||||||| | ||||||||||||||||| |||| ||||||||||    
T  9667975 aaacaacttatgacatgtccataagctgttttcaacttatttccataagctctc 9668028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 663 - 739
Target Start/End: Original strand, 7931710 - 7931786
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    |||||||||||||||||||||||||| |||| |||||||| ||| ||||  ||||||||  ||||||| || |||||    
T  7931710 ttatgaaaacaacttatgacatgttcttaagttgttttcagcttatttccgtaagctctgtaggatagcttttgaaa 7931786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 663 - 706
Target Start/End: Complemental strand, 769224 - 769181
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaactt 706  Q
    ||||||||||| |||||||||||||| |||||||||||||||||    
T  769224 ttatgaaaacatcttatgacatgttcataagctgttttcaactt 769181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 663 - 706
Target Start/End: Complemental strand, 1575981 - 1575938
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaactt 706  Q
    |||||||||||||||||||||||||| ||||||||||| |||||    
T  1575981 ttatgaaaacaacttatgacatgttcataagctgtttttaactt 1575938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 664 - 798
Target Start/End: Complemental strand, 2514787 - 2514653
Alignment:
Q  664 tatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaact-atttatagcttatataaaagt 762  Q
    |||| ||| |||||||||||| ||| ||||||||||||  |||  ||| | ||| |||| |||| || |||||||| | | |||||||| |||||||| |    
T  2514787 tatggaaataacttatgacatattcataagctgttttcgtcttacttccaaaagatctccaggacagcttatgaaaataacttatagctcatataaaatt 2514688  T
Q  763 agttttgactttattttatcttctgttataaaaata 798  Q
    || ||||||||||||||||||| | ||||| |||||    
T  2514687 ag-tttgactttattttatcttttattatagaaata 2514653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 641 - 712
Target Start/End: Complemental strand, 22743589 - 22743518
Alignment:
Q  641 ttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttct 712  Q
    |||||||||||| || || || | ||||||||||||||| |||||||| ||||||||||||| ||| |||||    
T  22743589 ttgtaagactatctgtgagagctcatgaaaacaacttattacatgttcataagctgttttcagcttatttct 22743518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 638 - 721
Target Start/End: Complemental strand, 30863357 - 30863274
Alignment:
Q  638 cacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctct 721  Q
    ||||||| ||||| ||||  | || |||||||||||||||||||||||| | |||| |||||||| |||  |||||||||||||    
T  30863357 cacttgttagactctttggtagagcttatgaaaacaacttatgacatgtacataagttgttttcagcttacttctataagctct 30863274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 663 - 706
Target Start/End: Complemental strand, 31624176 - 31624133
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaactt 706  Q
    ||||||||||| |||||||||||||| |||||||||||||||||    
T  31624176 ttatgaaaacagcttatgacatgttcataagctgttttcaactt 31624133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 652 - 735
Target Start/End: Original strand, 32577959 - 32578042
Alignment:
Q  652 tttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttat 735  Q
    ||||||| || |||||||||||||||||||||||| | | ||||||||||| ||| |||| ||| |||||  ||||||| ||||    
T  32577959 tttgagagagcttatgaaaacaacttatgacatgtccttgagctgttttcagcttatttccatatgctcttcaggatagcttat 32578042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 669 - 739
Target Start/End: Complemental strand, 2112280 - 2112210
Alignment:
Q  669 aaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    |||||||||||||||||||| |||| |||||||   || ||||||||||| ||| | ||||||||||||||    
T  2112280 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaa 2112210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 648 - 722
Target Start/End: Original strand, 10616510 - 10616584
Alignment:
Q  648 actatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctc 722  Q
    |||||||| || || ||||| |||||||||||||||||| |||||| ||| |||| ||| ||| |||||||||||    
T  10616510 actatttgggagagcttatggaaacaacttatgacatgtccgtaagttgtgttcagcttatttttataagctctc 10616584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 629 - 703
Target Start/End: Original strand, 27595517 - 27595591
Alignment:
Q  629 ttgcgtaagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaa 703  Q
    |||| ||||||||| | ||||| |||| || | |||||| |||||||||||||||||||| |||||| |||||||    
T  27595517 ttgcataagcacttatgagactgtttgggagaatttatggaaacaacttatgacatgttcataagctattttcaa 27595591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 634 - 736
Target Start/End: Original strand, 33080533 - 33080635
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagttt 733  Q
    ||||||||||| ||| | ||| | | | ||| ||||| ||||||||||||||||  |||| | ||||||  || ||||||||||||||| ||||||||||    
T  33080533 taagcacttgtgagattgtttaatagaatttctgaaaccaacttatgacatgtttataagttattttcagtttatttctataagctctccaggatagttt 33080632  T
Q  734 atg 736  Q
    |||    
T  33080633 atg 33080635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 667 - 721
Target Start/End: Complemental strand, 34403937 - 34403883
Alignment:
Q  667 gaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctct 721  Q
    |||||||||||||||||||||| |||| |||||||| ||| |||| |||||||||    
T  34403937 gaaaacaacttatgacatgttcataaggtgttttcaccttatttccataagctct 34403883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 634 - 792
Target Start/End: Original strand, 281803 - 281961
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagttt 733  Q
    |||| |||||| ||||| |||| || || | ||| || |||||||||||||||   |||| |||||||| ||| |||| || ||||||| ||||||| ||    
T  281803 taagtacttgtgagactgtttgggagagctaatggaagcaacttatgacatgtctataagttgttttcagcttatttccatgagctctctaggatagctt 281902  T
Q  734 atgaa-actatttatagcttatat-aaaagtagttttgactttattttatcttctgttata 792  Q
    ||||| ||   ||||||||||||| ||||  ||  |||||||||||||||||| |||||||    
T  281903 atgaacacagcttatagcttatatgaaaacaag--ttgactttattttatcttttgttata 281961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 666 - 798
Target Start/End: Complemental strand, 4006797 - 4006665
Alignment:
Q  666 tgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatg-aaactatttatagcttatataaaagtag 764  Q
    ||||||||||||| || |||| | |||| | |||||| ||| |||  |||| |||||| |||||| ||||| |||| | |||||||||||||||||  |     
T  4006797 tgaaaacaacttacgatatgtccataagttattttcagcttattttcataacctctcagggatagcttatgaaaacaacttatagcttatataaaaaca- 4006699  T
Q  765 ttttgactttattttatcttctgttataaaaata 798  Q
     ||||||||||||||||| | ||||||| |||||    
T  4006698 atttgactttattttatcatttgttatagaaata 4006665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 674 - 798
Target Start/End: Original strand, 28660755 - 28660879
Alignment:
Q  674 acttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatg-aaactatttatagcttatataaaagtagttttgact 772  Q
    ||||||||||||||  |||  ||||||||  | ||||| ||||||| | |||||||||||||| |||| |||||||  |||||| ||| ||  ||| |||    
T  28660755 acttatgacatgtttataaattgttttcagttagtttccataagcttttaaggatagtttatgaaaacaatttataatttatatgaaaata-atttaact 28660853  T
Q  773 ttattttatcttctgttataaaaata 798  Q
    |||||||||||  |||||||||||||    
T  28660854 ttattttatctattgttataaaaata 28660879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 639 - 736
Target Start/End: Complemental strand, 34939623 - 34939526
Alignment:
Q  639 acttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatg 736  Q
    |||||||| | | ||||||| || ||||| ||||||||||||||| || |||||| |||||||| ||| |||| |||| ||||  ||||||| |||||    
T  34939623 acttgtaaaattgtttgagagagcttatggaaacaacttatgacacgtccgtaagttgttttcagcttatttccataacctcttcaggatagcttatg 34939526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 663 - 735
Target Start/End: Complemental strand, 2263278 - 2263206
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttat 735  Q
    ||||||||||||| |||||||||||| ||   |||||||||||| |||||||||| |||| | ||||| ||||    
T  2263278 ttatgaaaacaacatatgacatgttcatagcgtgttttcaacttctttctataaggtctcgaagatagcttat 2263206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 663 - 739
Target Start/End: Complemental strand, 2455896 - 2455820
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    ||||| |||||||||||||||||  | ||| || |||||||||| |||| |||||||||| | ||||| ||||||||    
T  2455896 ttatggaaacaacttatgacatgcccataaactattttcaacttatttccataagctctccaagatagcttatgaaa 2455820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 675 - 739
Target Start/End: Complemental strand, 6647461 - 6647397
Alignment:
Q  675 cttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    |||||||||||||| |||| |||||||||||| |||  |||||||||| | ||||| ||||||||    
T  6647461 cttatgacatgttcataagatgttttcaacttattttcataagctctctaagatagcttatgaaa 6647397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 660 - 719
Target Start/End: Complemental strand, 324053 - 323994
Alignment:
Q  660 agtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagct 719  Q
    |||||||||||||||||||| |||||||| |||  |||||||| ||| || |||||||||    
T  324053 agtttatgaaaacaacttataacatgttcctaaattgttttcaccttattcctataagct 323994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 663 - 722
Target Start/End: Complemental strand, 781467 - 781408
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctc 722  Q
    |||||||||||| ||||||||||| ||| | ||||||||| | | |||||||||||||||    
T  781467 ttatgaaaacaaattatgacatgtccgtcaactgttttcagcatatttctataagctctc 781408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 679 - 738
Target Start/End: Complemental strand, 2168087 - 2168028
Alignment:
Q  679 tgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaa 738  Q
    |||||||||| |||||| ||||  ||||||||  |||||||||| |||||||||||||||    
T  2168087 tgacatgttcctaagctatttttcacttgttttcataagctctccaggatagtttatgaa 2168028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 679 - 738
Target Start/End: Complemental strand, 2179720 - 2179661
Alignment:
Q  679 tgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaa 738  Q
    |||||||||| |||||| ||||  ||||||||  |||||||||| |||||||||||||||    
T  2179720 tgacatgttcctaagctatttttcacttgttttcataagctctccaggatagtttatgaa 2179661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 710 - 756
Target Start/End: Original strand, 7149504 - 7149551
Alignment:
Q  710 tctataagctctcaaggatagtttatgaaacta-tttatagcttatat 756  Q
    ||||||||||||| |||||||||||||||| || ||||||||||||||    
T  7149504 tctataagctctccaggatagtttatgaaaatagtttatagcttatat 7149551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 634 - 729
Target Start/End: Original strand, 32171338 - 32171433
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggata 729  Q
    ||||||||||  ||||| ||||||| || ||||||||||| ||||||||| || |  ||||| |||||| ||| |||| ||||||| || ||||||    
T  32171338 taagcacttgcgagactgtttgagagagcttatgaaaacagcttatgacaagtccagaagctattttcagcttatttccataagctatccaggata 32171433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 652 - 739
Target Start/End: Complemental strand, 33887927 - 33887840
Alignment:
Q  652 tttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    ||||||| | |||||||||| | ||||||||||||||  ||| |||||||||||| |||| ||||||  |  ||||||| ||||||||    
T  33887927 tttgagagaatttatgaaaatagcttatgacatgttcacaagttgttttcaacttatttccataagcatttcaggatagcttatgaaa 33887840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 635 - 726
Target Start/End: Original strand, 34544100 - 34544191
Alignment:
Q  635 aagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaagg 726  Q
    |||||||||| | ||||||||| | |  |||||||||||  ||||||||||| | ||| || |||||| ||| ||||||||| |||||||||    
T  34544100 aagcacttgtgaaactatttgaaagatcttatgaaaacagtttatgacatgtccataaactattttcatcttatttctataaactctcaagg 34544191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 663 - 721
Target Start/End: Original strand, 725639 - 725697
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctct 721  Q
    |||||||||||||||||||||||| ||||  || |||||| ||| |||| |||||||||    
T  725639 ttatgaaaacaacttatgacatgtccgtagactattttcagcttatttccataagctct 725697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 669 - 739
Target Start/End: Complemental strand, 4246490 - 4246420
Alignment:
Q  669 aaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    |||||||| ||||||||| | ||||||||||||||||| ||| |||| |||||| |  |||| ||||||||    
T  4246490 aaacaactcatgacatgtccataagctgttttcaacttatttttatatgctctccataatagcttatgaaa 4246420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 675 - 721
Target Start/End: Complemental strand, 13908537 - 13908491
Alignment:
Q  675 cttatgacatgttcgtaagctgttttcaacttgtttctataagctct 721  Q
    |||||||||||||||||||||||||||| ||| |||  |||||||||    
T  13908537 cttatgacatgttcgtaagctgttttcagcttattttcataagctct 13908491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 673 - 739
Target Start/End: Complemental strand, 25100119 - 25100053
Alignment:
Q  673 aacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    |||||||||||||||| |  ||| |||||||||| ||||||||||||||  | ||||| ||||||||    
T  25100119 aacttatgacatgttcatttgctattttcaacttatttctataagctctttaagatagcttatgaaa 25100053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 663 - 700
Target Start/End: Complemental strand, 696528 - 696491
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgtttt 700  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  696528 ttatgaaaacagcttatgacatgttcataagctgtttt 696491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 634 - 687
Target Start/End: Original strand, 3158661 - 3158714
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgtt 687  Q
    ||||||||||| |||||| |||||| |||||||| ||| | |||||||||||||    
T  3158661 taagcacttgtgagactaattgagaaagtttatggaaatagcttatgacatgtt 3158714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 744 - 825
Target Start/End: Complemental strand, 10032575 - 10032495
Alignment:
Q  744 ttatagcttatataaaagtagttttgactttattttatcttctgttataaaaataaccagtacataaacatttatatgataa 825  Q
    ||||||||||||| ||| |||||| | |||||||| | ||  ||||||||||||| |   ||||||||||||||||||||||    
T  10032575 ttatagcttatatgaaattagttt-gcctttatttcacctattgttataaaaatagcttatacataaacatttatatgataa 10032495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 662 - 703
Target Start/End: Original strand, 27615256 - 27615297
Alignment:
Q  662 tttatgaaaacaacttatgacatgttcgtaagctgttttcaa 703  Q
    |||||| |||||||||||||||||||| |||||| |||||||    
T  27615256 tttatggaaacaacttatgacatgttcataagctattttcaa 27615297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 637 - 686
Target Start/End: Complemental strand, 33116696 - 33116647
Alignment:
Q  637 gcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgt 686  Q
    |||||||| ||||| ||||||  | |||||||||||||||||||||||||    
T  33116696 gcacttgtgagactgtttgagggaatttatgaaaacaacttatgacatgt 33116647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 634 - 735
Target Start/End: Original strand, 34538173 - 34538274
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagttt 733  Q
    ||||||||||| ||||||||||||| |  |||| |||||| |||| ||||||| | ||| || |||||| ||| ||| || || ||||| ||||||| ||    
T  34538173 taagcacttgtgagactatttgagagatcttataaaaacagcttacgacatgtccataaactattttcagcttatttatacaaactctctaggatagctt 34538272  T
Q  734 at 735  Q
    ||    
T  34538273 at 34538274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 7e-21; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 663 - 739
Target Start/End: Original strand, 4699599 - 4699675
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    |||||||||||||||||||||||||| ||||||||||| | ||| |||||||||||||||  |||||||||||||||    
T  4699599 ttatgaaaacaacttatgacatgttcataagctgtttttagcttatttctataagctctccgggatagtttatgaaa 4699675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 676 - 784
Target Start/End: Complemental strand, 30257756 - 30257648
Alignment:
Q  676 ttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatg-aaactatttatagcttatataaaagtagttttgacttt 774  Q
    ||||||||||||| ||||||||||||| ||| ||||||||||| ||| ||||||||||||| |||| | ||| |||||||||  ||  || |||||||||    
T  30257756 ttatgacatgttcataagctgttttcagcttatttctataagccctccaggatagtttatgaaaacaacttaaagcttatatggaaacag-tttgacttt 30257658  T
Q  775 attttatctt 784  Q
    ||||||||||    
T  30257657 attttatctt 30257648  T

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Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 663 - 736
Target Start/End: Complemental strand, 35925776 - 35925703
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatg 736  Q
    ||||||||||| |||||||||||||| ||||||||||||||||| |||| |||| ||||| | ||||| |||||    
T  35925776 ttatgaaaacagcttatgacatgttcataagctgttttcaacttatttccataaactctccatgatagcttatg 35925703  T

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Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 663 - 739
Target Start/End: Original strand, 24460391 - 24460467
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    ||||||||| | |||||||||||||| |||||||||| || ||| ||| | ||||||||||||||||| ||||||||    
T  24460391 ttatgaaaatagcttatgacatgttcataagctgtttccagcttatttttgtaagctctcaaggatagcttatgaaa 24460467  T

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Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 654 - 721
Target Start/End: Original strand, 38266435 - 38266502
Alignment:
Q  654 tgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctct 721  Q
    ||||| |||||||||||| |||||| ||||||||| |||  |||||||||||| ||||||||||||||    
T  38266435 tgagagagtttatgaaaataacttacgacatgttcataatttgttttcaacttatttctataagctct 38266502  T

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Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 663 - 760
Target Start/End: Complemental strand, 39596682 - 39596585
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaactat-ttatagcttatataaaa 760  Q
    |||||||||||  |||||||||||| |||||||| ||||||||| ||| ||||||||||| | ||||| |||| |||| || |||||||||||| ||||    
T  39596682 ttatgaaaacagtttatgacatgttggtaagctg-tttcaacttatttttataagctctccaagatagcttataaaaccatcttatagcttatacaaaa 39596585  T

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Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 634 - 798
Target Start/End: Original strand, 31517695 - 31517859
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagttt 733  Q
    ||||||||||| ||||| |||| || |  |||| ||||||||| ||||||||||| ||||||||||||| ||| |||  |||||||||| | || || ||    
T  31517695 taagcacttgtgagactgtttgggagaacttatcaaaacaactcatgacatgttcataagctgttttcagcttattttcataagctctccaagacagatt 31517794  T
Q  734 atgaa-actatttatagcttatataaaagtagttttgactttattttatcttctgttataaaaata 798  Q
    ||||| ||   ||||||||||||| ||| |   ||| ||||||||||||||| |||| || |||||    
T  31517795 atgaagacagcttatagcttatatgaaa-tcaatttaactttattttatcttttgttgtagaaata 31517859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 634 - 738
Target Start/End: Original strand, 32515396 - 32515500
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagttt 733  Q
    ||||||||||| ||||| |||| || || ||||| ||||| | ||||||||||   |||| |||||||||||| | ||||||||||||| | ||||| ||    
T  32515396 taagcacttgtgagactgtttgggagagcttatggaaacagcgtatgacatgtcaataagttgttttcaacttatatctataagctctccatgatagctt 32515495  T
Q  734 atgaa 738  Q
    |||||    
T  32515496 atgaa 32515500  T

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Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 663 - 739
Target Start/End: Complemental strand, 37811938 - 37811862
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    ||||||||||| |||||||||||||| ||| ||||||||||||| |||| || ||||||| | ||| | ||||||||    
T  37811938 ttatgaaaacagcttatgacatgttcataaactgttttcaacttatttccattagctctccatgatggcttatgaaa 37811862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 663 - 722
Target Start/End: Complemental strand, 6262106 - 6262047
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctc 722  Q
    |||||| ||||||||||||||||||| |||||| |||||||||| |||| | ||||||||    
T  6262106 ttatgagaacaacttatgacatgttcataagctattttcaacttatttccacaagctctc 6262047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 666 - 756
Target Start/End: Original strand, 7218061 - 7218152
Alignment:
Q  666 tgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatg-aaactatttatagcttatat 756  Q
    ||||||| |||||||||| ||||  |||||||||||||||| |||  ||||| |||| ||||||| ||||| |||| | |||||||||||||    
T  7218061 tgaaaacgacttatgacacgttcacaagctgttttcaacttattttcataagttctccaggataggttatgaaaacaacttatagcttatat 7218152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 766 - 825
Target Start/End: Original strand, 7274026 - 7274085
Alignment:
Q  766 tttgactttattttatcttctgttataaaaataaccagtacataaacatttatatgataa 825  Q
    ||||||||||||| ||||| |||||||||||||||   ||||||| ||||||||||||||    
T  7274026 tttgactttatttcatcttttgttataaaaataacatatacataagcatttatatgataa 7274085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 669 - 798
Target Start/End: Original strand, 30259476 - 30259606
Alignment:
Q  669 aaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatag-tttatg-aaactatttatagcttatataaaagtagtt 766  Q
    |||||||||| |||||||   |||  |||||||||||| |||| |||||||||| | ||||| |||||| ||||   ||||||||||||| |||| ||||    
T  30259476 aaacaacttacgacatgtcaataaattgttttcaacttatttccataagctctccatgatagctttatgcaaacagcttatagcttatatcaaagcagtt 30259575  T
Q  767 ttgactttattttatcttctgttataaaaata 798  Q
    | ||||||||||||| || ||||||| |||||    
T  30259576 t-gactttattttatattttgttatagaaata 30259606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 637 - 719
Target Start/End: Complemental strand, 4868511 - 4868430
Alignment:
Q  637 gcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagct 719  Q
    |||||||| ||||| ||||||| ||||||||||| |||||||||||||||   |||| |||||||||||| |||  |||||||    
T  4868511 gcacttgtgagactgtttgagagagtttatgaaa-caacttatgacatgtcaataagttgttttcaacttatttacataagct 4868430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 640 - 738
Target Start/End: Complemental strand, 10439795 - 10439697
Alignment:
Q  640 cttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaa 738  Q
    ||||| |||||||||| || || ||||||||||||  |||||||||| | ||| ||| ||||| ||| |||| |||| ||||| |||||||||| ||||    
T  10439795 cttgtgagactatttgggagagcttatgaaaacaaactatgacatgtccataatctgctttcagcttatttccataaactctccaggatagtttttgaa 10439697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 662 - 739
Target Start/End: Original strand, 15942730 - 15942808
Alignment:
Q  662 tttatgaaaacaacttatgacatgttcgtaagc-tgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    ||||||||||||||||||||||||||| ||||| |||||||| ||| |||| ||||| |||| | ||||  ||||||||    
T  15942730 tttatgaaaacaacttatgacatgttcataagcatgttttcagcttatttcaataagttctccaagataaattatgaaa 15942808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 744 - 813
Target Start/End: Complemental strand, 15360898 - 15360830
Alignment:
Q  744 ttatagcttatataaaagtagttttgactttattttatcttctgttataaaaataaccagtacataaaca 813  Q
    ||||||||||||| |||  ||||| |||||||||||||||| ||||||| ||||||| | ||||||||||    
T  15360898 ttatagcttatatgaaaacagttt-gactttattttatcttttgttatagaaataactaatacataaaca 15360830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 669 - 738
Target Start/End: Complemental strand, 26184828 - 26184759
Alignment:
Q  669 aaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaa 738  Q
    ||||| |||||||||||| | |||||||||||||  || |||| |||||||||| |||||| ||||||||    
T  26184828 aaacagcttatgacatgtccataagctgttttcagattatttccataagctctccaggataatttatgaa 26184759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 663 - 724
Target Start/End: Original strand, 43722312 - 43722373
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaa 724  Q
    ||||||||| |||||||||||||||| || | |||||||| ||| ||| |||||||||||||    
T  43722312 ttatgaaaaaaacttatgacatgttcttatgttgttttcagcttatttttataagctctcaa 43722373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 634 - 706
Target Start/End: Complemental strand, 4445823 - 4445751
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaactt 706  Q
    ||||||||||| ||||| |||| || | ||||||||| || ||||| ||||||||  ||||||||||||||||    
T  4445823 taagcacttgtgagactgtttgggagaatttatgaaagcagcttataacatgttcagaagctgttttcaactt 4445751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 663 - 739
Target Start/End: Original strand, 7262502 - 7262578
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    |||| |||||| ||| |||||||||| ||||||||||||| ||| |||| | |||||||  ||||||| ||||||||    
T  7262502 ttataaaaacagcttttgacatgttcataagctgttttcaccttatttccacaagctcttcaggatagcttatgaaa 7262578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 636 - 784
Target Start/End: Complemental strand, 15489071 - 15488919
Alignment:
Q  636 agcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgtt----cgtaagctgttttcaacttgtttctataagctctcaaggatagt 731  Q
    ||||||||||||| | ||||||| || ||||| ||||| | |||||||||||    | ||| ||||||||| ||| |||||| ||| |||| ||||||      
T  15489071 agcacttgtaagaatgtttgagagagcttatgtaaacagcgtatgacatgttattccataatctgttttcagcttatttctacaagttctctaggataac 15488972  T
Q  732 ttatgaa-actatttatagcttatataaaagtagttttgactttattttatctt 784  Q
    ||||||| || |  |||| ||||||||||| ||| ||||||||||| |||||||    
T  15488971 ttatgaagacaacgtatatcttatataaaaatag-tttgactttatgttatctt 15488919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 665 - 721
Target Start/End: Original strand, 37593670 - 37593726
Alignment:
Q  665 atgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctct 721  Q
    ||||| |||||||||||||||||| ||||||||||||| ||| |||  |||||||||    
T  37593670 atgaacacaacttatgacatgttcataagctgttttcagcttattttcataagctct 37593726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 638 - 710
Target Start/End: Original strand, 38170649 - 38170721
Alignment:
Q  638 cacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgttt 710  Q
    ||||||| |||||  ||| || || ||||||||||| |||||||||||||| |||| |||||||| |||||||    
T  38170649 cacttgtgagactgcttgggagagcttatgaaaacagcttatgacatgttcataagttgttttcagcttgttt 38170721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 634 - 686
Target Start/End: Complemental strand, 42336730 - 42336678
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgt 686  Q
    |||||||||||  |||| |||||||||  ||||||||||||||||||||||||    
T  42336730 taagcacttgtgcgactgtttgagataacttatgaaaacaacttatgacatgt 42336678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 668 - 739
Target Start/End: Complemental strand, 6292574 - 6292503
Alignment:
Q  668 aaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    |||||| |||||||||||||| ||||||||||||| ||| |||  |||||||||| |  |||||||| ||||    
T  6292574 aaaacagcttatgacatgttcataagctgttttcagcttattttcataagctctccaaaatagtttacgaaa 6292503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 669 - 724
Target Start/End: Complemental strand, 6977004 - 6976950
Alignment:
Q  669 aaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaa 724  Q
    |||||||||||||||||||| ||||||||||| ||||| |||| |||| |||||||    
T  6977004 aaacaacttatgacatgttcataagctgtttt-aacttatttccataaactctcaa 6976950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 634 - 800
Target Start/End: Original strand, 10199363 - 10199529
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagttt 733  Q
    ||||||||||| | |||||||| || |  | ||||||| | |||||||||||||| |||| |||||||| ||| |||  |||||||||| |  |||| ||    
T  10199363 taagcacttgtgacactatttgggagaactcatgaaaatagcttatgacatgttcataagttgttttcagcttattttcataagctctctaaaatagctt 10199462  T
Q  734 atgaaacta-tttatagcttatataaaagtagttttgactttattttatcttctgttataaaaataac 800  Q
    ||||||  |  |||| | |||||  ||| ||| |||||||||||||||||||  |||||| |||||||    
T  10199463 atgaaaaaagcttatcgattatacgaaaatag-tttgactttattttatcttgggttatagaaataac 10199529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 668 - 739
Target Start/End: Complemental strand, 23445415 - 23445344
Alignment:
Q  668 aaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    ||||||||||||||||||||| |||||| |||||||| |||||  | | |||||| | ||||| ||||||||    
T  23445415 aaaacaacttatgacatgttcataagctattttcaacatgttttaagacgctctccaagatagcttatgaaa 23445344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 767 - 825
Target Start/End: Complemental strand, 4200211 - 4200153
Alignment:
Q  767 ttgactttattttatcttctgttataaaaataaccagtacataaacatttatatgataa 825  Q
    |||||||||||||||||| |||||||||||||||   || ||||||| ||| |||||||    
T  4200211 ttgactttattttatcttttgttataaaaataacttatatataaacacttagatgataa 4200153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 746 - 800
Target Start/End: Original strand, 19092431 - 19092485
Alignment:
Q  746 atagcttatataaaagtagttttgactttattttatcttctgttataaaaataac 800  Q
    |||||||||||||||||||||||||| |||||||   || |||||| ||||||||    
T  19092431 atagcttatataaaagtagttttgacattatttttcattttgttatgaaaataac 19092485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 669 - 735
Target Start/End: Complemental strand, 23895409 - 23895343
Alignment:
Q  669 aaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttat 735  Q
    |||||| ||||| |||||||||||||| |||| ||||| |||| | |||||||| | ||||||||||    
T  23895409 aaacaatttatggcatgttcgtaagctatttttaacttatttccacaagctctccaagatagtttat 23895343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 641 - 735
Target Start/End: Complemental strand, 27140586 - 27140492
Alignment:
Q  641 ttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttat 735  Q
    ||||||| || ||||||| |||||| | ||||| |||||||||||| | |||| |||||||| ||| |||  |||||||||| | ||||| ||||    
T  27140586 ttgtaagtctctttgagagagtttaaggaaacagcttatgacatgtccataagttgttttcagcttatttgcataagctctccatgatagcttat 27140492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 652 - 706
Target Start/End: Original strand, 33185931 - 33185985
Alignment:
Q  652 tttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaactt 706  Q
    ||||||| ||||||||||||||| ||||||||| | | ||| |||||||||||||    
T  33185931 tttgagagagtttatgaaaacaaattatgacatttccataacctgttttcaactt 33185985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 766 - 827
Target Start/End: Complemental strand, 49517053 - 49516991
Alignment:
Q  766 tttgactttattttatcttctgttataaaaataaccagtacataaac-atttatatgataaac 827  Q
    ||||||||||||||||||| ||||||| |||||||   |||| |||| |||||||||||||||    
T  49517053 tttgactttattttatcttttgttatagaaataacttatacacaaacaatttatatgataaac 49516991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 669 - 702
Target Start/End: Original strand, 3070080 - 3070113
Alignment:
Q  669 aaacaacttatgacatgttcgtaagctgttttca 702  Q
    |||||||||||||||||||| |||||||||||||    
T  3070080 aaacaacttatgacatgttcataagctgttttca 3070113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 663 - 700
Target Start/End: Complemental strand, 4482016 - 4481979
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgtttt 700  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  4482016 ttatgaaaacaacttattacatgttcataagctgtttt 4481979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 666 - 739
Target Start/End: Complemental strand, 10744384 - 10744311
Alignment:
Q  666 tgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    |||||||| |||||| ||||||| ||||||||||||| ||| ||| |||||| |||| | || || ||||||||    
T  10744384 tgaaaacagcttatggcatgttcataagctgttttcatcttatttttataagttctctaagacagcttatgaaa 10744311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 655 - 755
Target Start/End: Complemental strand, 15515635 - 15515534
Alignment:
Q  655 gagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatg-aaactatttatagctta 753  Q
    |||| |||||||||||||||||||||||||||   || ||| ||||||| || |||| ||||||| || | ||||  ||||| |||| | ||||||||||    
T  15515635 gagagagtttatgaaaacaacttatgacatgtcaatacgctattttcaatttatttccataagctatccatgataacttatgaaaacaacttatagctta 15515536  T
Q  754 ta 755  Q
    ||    
T  15515535 ta 15515534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 646 - 739
Target Start/End: Complemental strand, 25479684 - 25479591
Alignment:
Q  646 agactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    |||||||||| |  || ||||||||| |  ||||||||||||| | || |||||||| ||| |||  |||||||||| ||||||| ||||||||    
T  25479684 agactatttgtgtgagcttatgaaaatagattatgacatgttcattagttgttttcagcttattttcataagctctctaggatagcttatgaaa 25479591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 670 - 739
Target Start/End: Original strand, 35080060 - 35080129
Alignment:
Q  670 aacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    ||||||||||||||||||| ||||||||||| | ||| |||| | |||||||| | ||||| | ||||||    
T  35080060 aacaacttatgacatgttcataagctgttttgagcttatttcgacaagctctccatgatagctcatgaaa 35080129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 712 - 800
Target Start/End: Original strand, 42556664 - 42556752
Alignment:
Q  712 tataagctctcaaggatagtttatgaaa-ctatttatagcttatataaaagtagttttgactttattttatcttctgttataaaaataac 800  Q
    ||||| ||||| | ||||| |||||||| | | ||||||||||||||||||||| ||||| ||||||| ||||| ||| ||| |||||||    
T  42556664 tataaactctccatgatagcttatgaaaacaacttatagcttatataaaagtag-tttgattttatttcatcttttgtcatagaaataac 42556752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 1e-19; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 634 - 791
Target Start/End: Complemental strand, 2996688 - 2996531
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagttt 733  Q
    ||||||||| | ||||| ||||||| || |||||||||||||||||||||||| | |||||| |||||||||| |||  ||| |||||| | ||||| ||    
T  2996688 taagcacttttgagactgtttgagagagcttatgaaaacaacttatgacatgtccataagcttttttcaacttattttcatacgctctccaagatagctt 2996589  T
Q  734 atg-aaactatttatagcttatataaaagtagttttgactttattttatcttctgttat 791  Q
    ||| |||| | ||||| |||||||||||  |  ||||||| ||||||||||| ||||||    
T  2996588 atgaaaacaacttataacttatataaaaaca-atttgactgtattttatcttatgttat 2996531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 634 - 855
Target Start/End: Complemental strand, 14011349 - 14011128
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagttt 733  Q
    ||||||| ||||| |||||||| || || ||||| ||| |  |||| ||||||   ||||||||||||| ||| |||| |||||||||| | ||||| ||    
T  14011349 taagcacatgtaaaactatttgggagagcttatgcaaagagtttatcacatgtctttaagctgttttcagcttatttccataagctctccaagatagctt 14011250  T
Q  734 atg-aaactatttatagcttatataaaagtagttttgactttattttatcttctgttataaaaataaccagtacataaacatttatatgataaacaatga 832  Q
    ||| ||||  ||| ||||||||||| ||  | |||   |||||||||||||| |||||||||| || |   |||| || ||||||||||||||||| | |    
T  14011249 atgtaaacattttgtagcttatatataaccaatttac-ctttattttatcttttgttataaaactagcttatacacaatcatttatatgataaacactta 14011151  T
Q  833 attaaaatgcttatccaaacagg 855  Q
    |||||  || |||||||||||||    
T  14011150 attaagttgtttatccaaacagg 14011128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 663 - 739
Target Start/End: Complemental strand, 1137798 - 1137722
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    ||||||||||| |||||||||||||| |||| ||||||||  || |||| ||||||||||  |||||||||||||||    
T  1137798 ttatgaaaacatcttatgacatgttcataagttgttttcagtttatttccataagctctcttggatagtttatgaaa 1137722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 663 - 739
Target Start/End: Original strand, 20936213 - 20936289
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    ||||||||||||||||||| |||||| ||||||||||||| ||| |||| |||| ||||| |||||||  |||||||    
T  20936213 ttatgaaaacaacttatgatatgttcataagctgttttcaccttatttccataatctctccaggatagaatatgaaa 20936289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 634 - 722
Target Start/End: Original strand, 27123307 - 27123395
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctc 722  Q
    |||| |||||| ||||| ||||||| || ||||| ||||||||||||||||||   |||| |||||||||||| |||| ||||||||||    
T  27123307 taagtacttgtgagactgtttgagagagcttatggaaacaacttatgacatgtctttaagttgttttcaacttatttccataagctctc 27123395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 634 - 798
Target Start/End: Complemental strand, 4071993 - 4071833
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagttt 733  Q
    ||||||||||| ||||| ||||||| || ||||||||||| |||||||  |||| ||||| |||||||| ||| | || ||||||||||    |||| ||    
T  4071993 taagcacttgtgagactgtttgagagagcttatgaaaacagcttatgatttgttggtaagttgttttcagctt-tgtccataagctctc---tatagctt 4071898  T
Q  734 atga-aactatttatagcttatataaaagtagttttgactttattttatcttctgttataaaaata 798  Q
    || | ||| | ||||||||||||| ||| ||  ||||||||||||||||||| ||||||| |||||    
T  4071897 atcataacaacttatagcttatatgaaaata-atttgactttattttatcttttgttatagaaata 4071833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 662 - 798
Target Start/End: Complemental strand, 24929580 - 24929444
Alignment:
Q  662 tttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatg-aaactatttatagcttatataaaa 760  Q
    |||||| ||||| |||||| ||||||| |||  |||||||| ||| |||| |||||||||| || | |||||||| |||| | ||||||||| ||| |||    
T  24929580 tttatggaaacagcttatggcatgttcataaattgttttcagcttatttccataagctctctagtagagtttatgaaaacaacttatagcttttatgaaa 24929481  T
Q  761 gtagttttgactttattttatcttctgttataaaaata 798  Q
      || || |||||||||||||||| ||||||| |||||    
T  24929480 acag-ttagactttattttatcttttgttatagaaata 24929444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 634 - 739
Target Start/End: Original strand, 50742791 - 50742896
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagttt 733  Q
    ||||||||||| ||||| ||||||| |  |||||||||||  | ||||||||||| ||  ||||||||||||  |||  |||||||||| ||||||| ||    
T  50742791 taagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttcaactcattttcataagctctccaggatagctt 50742890  T
Q  734 atgaaa 739  Q
    ||||||    
T  50742891 atgaaa 50742896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 663 - 711
Target Start/End: Complemental strand, 1966027 - 1965979
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttc 711  Q
    |||||||||||||||||||||||||| ||||||||||| ||||| ||||    
T  1966027 ttatgaaaacaacttatgacatgttcataagctgtttttaacttatttc 1965979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 653 - 760
Target Start/End: Original strand, 28300273 - 28300381
Alignment:
Q  653 ttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaacta-tttatagct 751  Q
    |||||| | |||||||||||| | |||||||||||| |||| |||||||||||| |||  |||||||||  | |||||  ||||||| || |||||||||    
T  28300273 ttgagagaatttatgaaaacagcctatgacatgttcttaagttgttttcaacttattttcataagctcttcaagatagcctatgaaaatagtttatagct 28300372  T
Q  752 tatataaaa 760  Q
    |||| ||||    
T  28300373 tatacaaaa 28300381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 663 - 739
Target Start/End: Complemental strand, 46110289 - 46110213
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    ||||||||||||||||||| ||  || |||| |||||||| ||| |||||||||||||||||  |||| ||||||||    
T  46110289 ttatgaaaacaacttatgatatactcataagttgttttcagcttatttctataagctctcaatcatagcttatgaaa 46110213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 672 - 739
Target Start/End: Complemental strand, 11264378 - 11264311
Alignment:
Q  672 caacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    ||||||||||||||| | ||| ||||||||||||| |||| |||||||||| ||||| | ||||||||    
T  11264378 caacttatgacatgtccataaactgttttcaacttatttccataagctctctaggatggcttatgaaa 11264311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 660 - 739
Target Start/End: Complemental strand, 23819178 - 23819099
Alignment:
Q  660 agtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    |||||| ||||||| |||||||||||| | |||| |||||||| ||| ||||||||||||||  | ||||| ||||||||    
T  23819178 agtttaagaaaacagcttatgacatgtccataagttgttttcatcttatttctataagctcttcaagatagcttatgaaa 23819099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 639 - 721
Target Start/End: Complemental strand, 10173631 - 10173550
Alignment:
Q  639 acttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctct 721  Q
    |||||| ||||| ||||| || | || ||||||||||| ||||||||||||||||||||||| |  || ||||||||||||||    
T  10173631 acttgtgagactgtttgatattgcttgtgaaaacaactcatgacatgttcgtaagctgtttt-agtttatttctataagctct 10173550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 634 - 767
Target Start/End: Complemental strand, 53315441 - 53315307
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagttt 733  Q
    ||||||| | |||||||||||| || || ||||||||||||| ||| |||||| | |||||| |||| ||||| |||  |||||||||| ||| | ||||    
T  53315441 taagcacatataagactatttgtgagagcttatgaaaacaacatatcacatgtccataagctatttttaacttattttcataagctctctaggtttgttt 53315342  T
Q  734 atga-aactatttatagcttatataaaagtagttt 767  Q
     ||| |||   ||||||||||||| ||| ||||||    
T  53315341 ttgagaacagcttatagcttatatgaaaatagttt 53315307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 668 - 784
Target Start/End: Original strand, 4684094 - 4684211
Alignment:
Q  668 aaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatg-aaactatttatagcttatataaaagtagtt 766  Q
    |||| |||||| ||||||| ||||||||||||| | ||| |||||| ||||||||  |||||| ||||| ||||  ||||||  || |||||||  |  |    
T  4684094 aaaataacttaagacatgtccgtaagctgtttttagcttatttctagaagctctcctggatagattatgtaaacagtttataaattgtataaaaaaaagt 4684193  T
Q  767 ttgactttattttatctt 784  Q
    ||||||||||||||||||    
T  4684194 ttgactttattttatctt 4684211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 668 - 760
Target Start/End: Original strand, 6466035 - 6466128
Alignment:
Q  668 aaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttat-gaaactatttatagcttatataaaa 760  Q
    |||||||||||||| |||||| |||||| |||||||||| |||| |||| ||||| || |||| |||| ||||| | |||||| ||||| ||||    
T  6466035 aaaacaacttatgagatgttcataagctattttcaacttatttccataatctctctagaatagcttatggaaacaacttatagattatacaaaa 6466128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 641 - 730
Target Start/End: Original strand, 6987703 - 6987792
Alignment:
Q  641 ttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatag 730  Q
    |||| ||||| |||| || || ||||| | |||||||||||||||| | ||| || |||||||||| |||| |||||||||| |||||||    
T  6987703 ttgtgagactgtttgggagagcttatggatacaacttatgacatgtccataaactattttcaacttatttccataagctctccaggatag 6987792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 664 - 737
Target Start/End: Original strand, 30066751 - 30066824
Alignment:
Q  664 tatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatga 737  Q
    |||||||||| ||||| | |||||| ||| ||||||||| ||||||| ||||||||||| | ||||| ||||||    
T  30066751 tatgaaaacagcttataatatgttcataatctgttttcagcttgtttttataagctctccaagatagcttatga 30066824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 695 - 798
Target Start/End: Original strand, 43371987 - 43372088
Alignment:
Q  695 tgttttcaacttgtttctataagctctcaaggatagtttatgaaacta-tttatagcttatataaaagtagttttgactttattttatcttctgttataa 793  Q
    |||||||||| | |||| |||||||||   |||||| ||||||||  | ||||||||||||||||||  ||||| |||| ||||||||||| ||||||||    
T  43371987 tgttttcaacatatttccataagctctt--ggatagcttatgaaatcagtttatagcttatataaaaacagttt-gactgtattttatcttttgttataa 43372083  T
Q  794 aaata 798  Q
    |||||    
T  43372084 aaata 43372088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 634 - 686
Target Start/End: Complemental strand, 6428133 - 6428081
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgt 686  Q
    ||||||||||| ||||  ||||||| || ||||||||||||||||||||||||    
T  6428133 taagcacttgtgagacagtttgagagagattatgaaaacaacttatgacatgt 6428081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 675 - 735
Target Start/End: Complemental strand, 19422472 - 19422412
Alignment:
Q  675 cttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttat 735  Q
    |||||||||||| | || ||| |||||||||| |||| |||||||||| ||||||||||||    
T  19422472 cttatgacatgtgcatacgcttttttcaacttatttccataagctctccaggatagtttat 19422412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 629 - 693
Target Start/End: Complemental strand, 50746095 - 50746031
Alignment:
Q  629 ttgcgtaagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaag 693  Q
    |||| ||||||||||| |||||||||| |  ||||||||||||||| |||||||| |||| ||||    
T  50746095 ttgcataagcacttgtgagactatttgtgtgagtttatgaaaacaatttatgacacgttcataag 50746031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 652 - 711
Target Start/End: Original strand, 17223009 - 17223068
Alignment:
Q  652 tttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttc 711  Q
    |||| |||| |||||||||| |  ||||||||||||| ||||||||||||||||| ||||    
T  17223009 tttgggataatttatgaaaatagtttatgacatgttcataagctgttttcaacttatttc 17223068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 766 - 853
Target Start/End: Complemental strand, 19422401 - 19422314
Alignment:
Q  766 tttgactttattttatcttctgttataaaaataaccagtacataaacatttatatgataaacaatgaattaaaatgcttatccaaaca 853  Q
    |||||||||||| |||||| ||||||| |||||||   ||||||| |||||||||||||| |  | ||||||  || |||||||||||    
T  19422401 tttgactttattatatcttttgttatagaaataacttatacataagcatttatatgataagcgcttaattaagctgtttatccaaaca 19422314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 652 - 798
Target Start/End: Original strand, 45128283 - 45128429
Alignment:
Q  652 tttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatg-aaactatttatagc 750  Q
    ||||||| || ||||| |||||||| ||  ||||| | | ||||||||||| ||| |||| ||||||| |  |||| |||||||| |||| |||||||||    
T  45128283 tttgagagagcttatggaaacaactgatatcatgtccatgagctgttttcagcttatttccataagctttataggacagtttatgaaaacaatttatagc 45128382  T
Q  751 ttatataaaagtagttttgactttattttatcttctgttataaaaata 798  Q
    |||||| | | ||  ||||| || |||||||||| ||||||| |||||    
T  45128383 ttatatgagaata-atttgatttgattttatcttttgttatagaaata 45128429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 690 - 800
Target Start/End: Complemental strand, 49219198 - 49219088
Alignment:
Q  690 taagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa-ctatttatagcttatataaaagtagttttgactttattttatcttctgt 788  Q
    |||| |||||||| ||| |||| |||| ||||  | |||||||||||||| | | ||||||||||||| ||| || ||| ||||||||||||| || |||    
T  49219198 taagttgttttcagcttatttccataatctctttaagatagtttatgaaaacaacttatagcttatatgaaaataattt-gactttattttatattttgt 49219100  T
Q  789 tataaaaataac 800  Q
    |||| |||||||    
T  49219099 tatagaaataac 49219088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 692 - 735
Target Start/End: Original strand, 51808886 - 51808929
Alignment:
Q  692 agctgttttcaacttgtttctataagctctcaaggatagtttat 735  Q
    ||||||||||||||| ||||||||||||||| ||||||| ||||    
T  51808886 agctgttttcaacttatttctataagctctccaggatagcttat 51808929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 767 - 837
Target Start/End: Original strand, 9319283 - 9319353
Alignment:
Q  767 ttgactttattttatcttctgttataaaaataaccagtacataaacatttatatgataaacaatgaattaa 837  Q
    ||||||||||| |||||| ||||||| |||| ||   |||| ||||||||||||||||||| || ||||||    
T  9319283 ttgactttattctatcttttgttatagaaattacttatacagaaacatttatatgataaacgattaattaa 9319353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 649 - 695
Target Start/End: Complemental strand, 25952917 - 25952871
Alignment:
Q  649 ctatttgagatagtttatgaaaacaacttatgacatgttcgtaagct 695  Q
    |||||||||| ||||||||||||||||||| ||| ||||| ||||||    
T  25952917 ctatttgagagagtttatgaaaacaacttaagacttgttcataagct 25952871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 744 - 798
Target Start/End: Complemental strand, 27623639 - 27623586
Alignment:
Q  744 ttatagcttatataaaagtagttttgactttattttatcttctgttataaaaata 798  Q
    ||||||||||||| ||| |||||| |||||||||||||||| ||||||| |||||    
T  27623639 ttatagcttatattaaaatagttt-gactttattttatcttttgttatacaaata 27623586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 660 - 702
Target Start/End: Complemental strand, 27970147 - 27970105
Alignment:
Q  660 agtttatgaaaacaacttatgacatgttcgtaagctgttttca 702  Q
    |||||||||||||||||||||||||||   |||||||||||||    
T  27970147 agtttatgaaaacaacttatgacatgtctataagctgttttca 27970105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 634 - 724
Target Start/End: Original strand, 33534124 - 33534214
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaa 724  Q
    |||| |||||| ||| ||||||||| || |||||||||||| || |||||| | | |||| |||||||| ||| |||  ||||||||||||    
T  33534124 taagtacttgtgagagtatttgagagagcttatgaaaacaaattgtgacatatccataagttgttttcagcttattttcataagctctcaa 33534214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 634 - 695
Target Start/End: Original strand, 1554963 - 1555024
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagct 695  Q
    |||| ||||| |||||| ||||||| | |||||||||| | |||||||||||||| ||||||    
T  1554963 taagaacttgcaagactgtttgagagaatttatgaaaatagcttatgacatgttcataagct 1555024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 682 - 798
Target Start/End: Complemental strand, 10192350 - 10192235
Alignment:
Q  682 catgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatg-aaactatttatagcttatataaaagtagttttgactttatttta 780  Q
    |||||||||||| |||||||||||| |||  || ||||||| ||||||| || || |||| | ||||| ||||||| |||  |  |||||||||||| ||    
T  10192350 catgttcgtaagttgttttcaacttattttcat-agctctccaggatagcttttgaaaacaacttataacttatatgaaaaca-atttgactttattcta 10192253  T
Q  781 tcttctgttataaaaata 798  Q
    |||| |||||||||||||    
T  10192252 tcttttgttataaaaata 10192235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 675 - 736
Target Start/End: Original strand, 29467620 - 29467681
Alignment:
Q  675 cttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatg 736  Q
    |||||||||||| | ||||||||||||| ||| |||| |||| ||||| |||||||| ||||    
T  29467620 cttatgacatgtccataagctgttttcagcttatttccataaactctctaggatagtgtatg 29467681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 677 - 825
Target Start/End: Original strand, 30207569 - 30207716
Alignment:
Q  677 tatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatg-aaactatttatagcttatataaaagtagttttgacttta 775  Q
    ||||||||||  |||||||||||||| ||| |||| |||| ||||| | | ||| ||||| |||| | ||||||||||||| |||  || ||||| ||||    
T  30207569 tatgacatgtctgtaagctgttttcagcttatttccataatctctctaaggtagcttatgaaaacaacttatagcttatatgaaaacag-tttga-ttta 30207666  T
Q  776 ttttatcttctgttataaaaataaccagtacataaacatttatatgataa 825  Q
    |||||| || ||||||| || ||||   ||||||| || |||||||||||    
T  30207667 ttttattttttgttatagaactaacatatacataagcacttatatgataa 30207716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 641 - 702
Target Start/End: Original strand, 46090776 - 46090837
Alignment:
Q  641 ttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttca 702  Q
    |||| ||||| | |||||||| ||||||||||| |||| ||||||||||| || ||||||||    
T  46090776 ttgtgagactgtatgagatagcttatgaaaacagcttaagacatgttcgttagttgttttca 46090837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 7e-18; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 634 - 792
Target Start/End: Complemental strand, 28165206 - 28165048
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagttt 733  Q
    ||||||||| | ||||| |||||||||| ||||| ||||| || | ||| ||||| ||||||||||||||||| |||| |||||||||| | ||||| ||    
T  28165206 taagcacttatgagactctttgagatagcttatggaaacagctcaagacctgttcataagctgttttcaacttatttccataagctctccatgatagctt 28165107  T
Q  734 atgaa-actatttatagcttatataaaagtagttttgactttattttatcttctgttata 792  Q
    || || ||  |||||||||||||| |||  |  |||||||| |||||||||| |||||||    
T  28165106 ataaagacagtttatagcttatattaaaaca-atttgacttcattttatcttttgttata 28165048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 646 - 784
Target Start/End: Complemental strand, 31338611 - 31338473
Alignment:
Q  646 agactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttat-gaaactatt 744  Q
    ||||| ||||||| |||||||| ||| ||||| |||||| ||| | ||| ||||||| ||| |||  ||||||||   |||||||||||| ||||| | |    
T  31338611 agactctttgagagagtttatggaaataacttttgacatattcatcagccgttttcaccttattttcataagctccataggatagtttatggaaacaact 31338512  T
Q  745 tatagcttatataaaagtagttttgactttattttatctt 784  Q
    |||| |||||||||||  || |||||||||||||||||||    
T  31338511 tataacttatataaaaacag-tttgactttattttatctt 31338473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 634 - 687
Target Start/End: Complemental strand, 8094421 - 8094368
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgtt 687  Q
    ||||||||||| ||||||||||||| | |||||||||||| |||||||||||||    
T  8094421 taagcacttgtgagactatttgagagattttatgaaaacagcttatgacatgtt 8094368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 690 - 798
Target Start/End: Original strand, 15075096 - 15075205
Alignment:
Q  690 taagctgttttcaacttgtttctataagctctcaaggatagtttatgaaactat-ttatagcttatataaaagtagttttgactttattttatcttctgt 788  Q
    ||||||||||| | ||| |||| |||||||||| | | |||||||||||| ||  ||||| ||||||||||| ||||||||| |  |||||||||| |||    
T  15075096 taagctgtttttagcttatttccataagctctctaaggtagtttatgaaaataacttataacttatataaaaatagttttgattaaattttatcttttgt 15075195  T
Q  789 tataaaaata 798  Q
    |||| |||||    
T  15075196 tatagaaata 15075205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 652 - 854
Target Start/End: Original strand, 27626096 - 27626299
Alignment:
Q  652 tttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaactatttatagc- 750  Q
    ||||||| || ||||| ||||| |||||||||||| | ||| ||||||| ||||| |||| |||||||||  | ||||| ||| |||||   |||| ||     
T  27626096 tttgagaaagcttatggaaacagcttatgacatgtccataaactgttttaaacttatttccataagctcttcatgatagcttaggaaacagcttattgca 27626195  T
Q  751 -ttatataaaagtagttttgactttattttatcttctgttataaaaataaccagtacataaacatttatatgataaacaatgaattaaaatgcttatcca 849  Q
     |||||||| | ||| ||||||||||||||| ||| || |||| ||||| |   |||||||||| |||||  ||||||| | ||||||  || |||||||    
T  27626196 tttatataataatag-tttgactttattttagcttttgatatagaaatagcttatacataaacaattatagcataaacacttaattaaggtgtttatcca 27626294  T
Q  850 aacag 854  Q
    |||||    
T  27626295 aacag 27626299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 663 - 706
Target Start/End: Original strand, 15740395 - 15740438
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaactt 706  Q
    |||||||||||||||||||||||||| ||||||||||| |||||    
T  15740395 ttatgaaaacaacttatgacatgttcataagctgtttttaactt 15740438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 663 - 702
Target Start/End: Complemental strand, 30535649 - 30535610
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttca 702  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  30535649 ttatgaaaacaacttatgatatgttcgtaagctgttttca 30535610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 661 - 735
Target Start/End: Original strand, 9423576 - 9423650
Alignment:
Q  661 gtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttat 735  Q
    ||||||| |||||| ||||||||||||| |||| |||||||| ||| |||| | |||||||| ||||||| ||||    
T  9423576 gtttatggaaacaatttatgacatgttcataagttgttttcagcttatttcaagaagctctccaggatagcttat 9423650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 662 - 799
Target Start/End: Complemental strand, 38010801 - 38010664
Alignment:
Q  662 tttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatg-aaactatttatagcttatataaaa 760  Q
    ||||||||||||||  || |||||||| ||||||||||| | ||| |||| ||||| |||| ||||||| ||||| ||||   ||||||||||||| |||    
T  38010801 tttatgaaaacaacaaataacatgttcataagctgtttttagcttatttccataagttctctaggatagattatgaaaacagcttatagcttatatgaaa 38010702  T
Q  761 gtagttttgactttattttatcttctgttataaaaataa 799  Q
      |  |||| |||| ||||||||| |||| |||||||||    
T  38010701 aca-atttggctttgttttatcttttgttttaaaaataa 38010664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 663 - 755
Target Start/End: Original strand, 3610724 - 3610817
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatg-aaactatttatagcttata 755  Q
    ||||| ||||| || ||||||||| | |||||  |||||| ||| ||||||||||||||| ||||||||||| | |||| | ||||||||||||    
T  3610724 ttatggaaacagctaatgacatgtccataagcctttttcagcttatttctataagctctctaggatagtttacgaaaacaacttatagcttata 3610817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 690 - 735
Target Start/End: Original strand, 27121604 - 27121649
Alignment:
Q  690 taagctgttttcaacttgtttctataagctctcaaggatagtttat 735  Q
    |||||||||||||||||||||| ||||||||||||| |||| ||||    
T  27121604 taagctgttttcaacttgtttccataagctctcaagtatagcttat 27121649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 634 - 711
Target Start/End: Original strand, 36598311 - 36598388
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttc 711  Q
    |||||| |||| ||| | ||||||| || ||||| ||||| |||||||||||||| ||||||||||||| ||| ||||    
T  36598311 taagcaattgtgagattgtttgagagagcttatggaaacatcttatgacatgttcataagctgttttcagcttatttc 36598388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 634 - 791
Target Start/End: Original strand, 44151431 - 44151592
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaa----cttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggata 729  Q
    |||| |||||| ||| ||||||||| || ||||||||||||     ||||||||||| | |||| |||||||| ||| |||| ||||||| |  | ||||    
T  44151431 taagtacttgtgagattatttgagagagcttatgaaaacaatttttttatgacatgtccataagatgttttcagcttatttccataagcttttcaagata 44151530  T
Q  730 gtttatg-aaactatttatagcttatataaaagtagttttgactttattttatcttctgttat 791  Q
    ||||||| |||| | |||||||||||||  ||  |||||| |||||||| |||||| ||||||    
T  44151531 gtttatgaaaacaacttatagcttatatggaaacagtttt-actttattctatcttttgttat 44151592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 646 - 722
Target Start/End: Original strand, 22387863 - 22387939
Alignment:
Q  646 agactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctc 722  Q
    ||||| |||| || || |||||||||||||||||| ||||||  ||| ||||||| ||||| |||| ||||||||||    
T  22387863 agactgtttgggagagcttatgaaaacaacttatggcatgtttataaactgtttttaacttatttccataagctctc 22387939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 634 - 730
Target Start/End: Complemental strand, 33894742 - 33894646
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatag 730  Q
    ||||||||||| ||||| |||| || || ||||||||||| | |||||||||| | |||| |||||||| ||| |||| |||| || || |||||||    
T  33894742 taagcacttgtgagactgtttgtgagagcttatgaaaacagcatatgacatgtccataagttgttttcagcttatttcaataaactttccaggatag 33894646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 634 - 702
Target Start/End: Original strand, 36887316 - 36887384
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttca 702  Q
    ||||||||| ||| ||| ||||||| || |||||||| || || ||||||||||| |||||||||||||    
T  36887316 taagcacttataaaactgtttgagagaggttatgaaaccatctcatgacatgttcataagctgttttca 36887384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 663 - 739
Target Start/End: Original strand, 44615088 - 44615164
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    |||||||||||||||||||||||| |  ||||||||||||  || |||| |||| ||||||||| ||  ||||||||    
T  44615088 ttatgaaaacaacttatgacatgtccacaagctgttttcacgttatttccataaactctcaaggctaacttatgaaa 44615164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 663 - 722
Target Start/End: Complemental strand, 941626 - 941567
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctc 722  Q
    ||||| |||||||||||||||||| | ||||| ||||| || || |||||||||||||||    
T  941626 ttatggaaacaacttatgacatgtccataagcagttttaaatttatttctataagctctc 941567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 680 - 808
Target Start/End: Complemental strand, 10190864 - 10190737
Alignment:
Q  680 gacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatg-aaactatttatagcttatataaaagtagttttgactttattt 778  Q
    ||||||||| ||||| ||||||||| | |||| ||||||| | ||| |||||||||| |||| ||||| || |||||| |||  || |||||||||||||    
T  10190864 gacatgttcataagcggttttcaacgtatttccataagcttttaagaatagtttatgaaaacaatttacagtttatatgaaaacag-tttgactttattt 10190766  T
Q  779 -tatcttctgttataaaaataaccagtacat 808  Q
     |||||  ||||||| ||||||| |||||||    
T  10190765 ctatct--tgttatagaaataactagtacat 10190737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 663 - 702
Target Start/End: Complemental strand, 11048113 - 11048074
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttca 702  Q
    |||| ||||||||||||||||||||| |||||||||||||    
T  11048113 ttatcaaaacaacttatgacatgttcataagctgttttca 11048074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 663 - 702
Target Start/End: Complemental strand, 19719092 - 19719053
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttca 702  Q
    |||||||||||||||||||||||||| ||| |||||||||    
T  19719092 ttatgaaaacaacttatgacatgttcataaactgttttca 19719053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 646 - 717
Target Start/End: Original strand, 28727730 - 28727801
Alignment:
Q  646 agactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataag 717  Q
    ||||| ||||||| || ||||| ||||  ||||||||||||||||| | |||||||| ||| ||||||||||    
T  28727730 agactgtttgagagagcttatggaaacggcttatgacatgttcgtatgttgttttcagcttatttctataag 28727801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 663 - 702
Target Start/End: Original strand, 43250683 - 43250722
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttca 702  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  43250683 ttatgaaaacagcttatgacatgttcgtaagttgttttca 43250722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 663 - 798
Target Start/End: Complemental strand, 46082122 - 46081984
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggata--gtttatg-aaactatttatagcttatataaa 759  Q
    |||||||||||||||||||||||  | |||| |||||||| ||| |||  |||||||||| || |||  || |||| |||| | ||||| ||||||| ||    
T  46082122 ttatgaaaacaacttatgacatgaccataagttgttttcagcttattttcataagctctccagaatagcgtctatgaaaacaacttataacttatatgaa 46082023  T
Q  760 agtagttttgactttattttatcttctgttataaaaata 798  Q
    |  |||||||||||| ||||| |||  |||||| |||||    
T  46082022 aacagttttgactttgttttaactttcgttatagaaata 46081984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 673 - 739
Target Start/End: Complemental strand, 529451 - 529385
Alignment:
Q  673 aacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    ||||||||||| |||| ||||||||||||||| | |||  |||||||||| | ||||| ||||||||    
T  529451 aacttatgacaagttcataagctgttttcaacatattttcataagctctccaagatagcttatgaaa 529385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 669 - 727
Target Start/End: Original strand, 12234879 - 12234937
Alignment:
Q  669 aaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaagga 727  Q
    ||||||||||||||||||   ||||||||||||| ||| |||| |||||||||| ||||    
T  12234879 aaacaacttatgacatgtctataagctgttttcagcttatttccataagctctctagga 12234937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 663 - 700
Target Start/End: Complemental strand, 11047953 - 11047916
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgtttt 700  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  11047953 ttataaaaacaacttatgacatgttcataagctgtttt 11047916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 634 - 687
Target Start/End: Original strand, 25670541 - 25670594
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgtt 687  Q
    ||||| ||||| ||||| ||||||| |  |||||||||||||||||||||||||    
T  25670541 taagctcttgtgagactgtttgagaaaacttatgaaaacaacttatgacatgtt 25670594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 663 - 704
Target Start/End: Complemental strand, 29290419 - 29290378
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaac 704  Q
    ||||| |||||||||||||||||| | |||||||||||||||    
T  29290419 ttatggaaacaacttatgacatgtccataagctgttttcaac 29290378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 646 - 739
Target Start/End: Complemental strand, 39360126 - 39360033
Alignment:
Q  646 agactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    ||||| ||||| | |||||||| |||||||||||||||| | | |||| || ||||| ||| |||| |||||||| | ||||||| || |||||    
T  39360126 agactgtttgatagagtttatggaaacaacttatgacatatccataagttgctttcagcttatttcaataagctcgccaggatagcttttgaaa 39360033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 663 - 700
Target Start/End: Original strand, 43219788 - 43219825
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgtttt 700  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  43219788 ttatgaaaacagcttatgacatgttcataagctgtttt 43219825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 744 - 825
Target Start/End: Complemental strand, 49060544 - 49060464
Alignment:
Q  744 ttatagcttatataaaagtagttttgactttattttatcttctgttataaaaataaccagtacataaacatttatatgataa 825  Q
    ||||||||||||||||| || ||| ||||||||||||| || ||||||| ||||| |   |||||||| | |||||||||||    
T  49060544 ttatagcttatataaaaataattt-gactttattttattttttgttatagaaatagcttatacataaatacttatatgataa 49060464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 4e-16; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 639 - 739
Target Start/End: Original strand, 37611175 - 37611275
Alignment:
Q  639 acttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaa 738  Q
    |||||| ||| | ||||||| || ||||||||||||||| |||||||||| |||||||||||||  || |||| |||||||||| | ||||| |||||||    
T  37611175 acttgtgagattgtttgagagagcttatgaaaacaacttgtgacatgttcataagctgttttcaggttatttccataagctctccaagatagcttatgaa 37611274  T
Q  739 a 739  Q
    |    
T  37611275 a 37611275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 639 - 739
Target Start/End: Original strand, 37787905 - 37788005
Alignment:
Q  639 acttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaa 738  Q
    |||||| ||| | ||||||| || ||||||||||||||| |||||||||| |||||||||||||  || |||| |||||||||| | ||||| |||||||    
T  37787905 acttgtgagattgtttgagagagcttatgaaaacaacttgtgacatgttcataagctgttttcaggttatttccataagctctccaagatagcttatgaa 37788004  T
Q  739 a 739  Q
    |    
T  37788005 a 37788005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 654 - 798
Target Start/End: Complemental strand, 14295601 - 14295457
Alignment:
Q  654 tgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatg-aaactatttatagctt 752  Q
    ||||| || ||||||||||| ||||||| ||||   ||||||||||||| |||  ||||| |||||||| ||||||| ||| | ||||   |||||||||    
T  14295601 tgagagagcttatgaaaacagcttatgatatgtcgataagctgttttcagcttacttctaaaagctctccaggatagcttacgaaaacagcttatagctt 14295502  T
Q  753 atataaaagtagttttgactttattttatcttctgttataaaaata 798  Q
    |||| |||  || ||||||||||||||||||| ||||||| |||||    
T  14295501 atatgaaaacag-tttgactttattttatcttttgttatagaaata 14295457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 634 - 738
Target Start/End: Complemental strand, 4619822 - 4619718
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagttt 733  Q
    |||||||||| || ||| |||| || || |||||||||||||| ||||||||||| ||||||| ||||| ||| |||| ||||| |||| | ||||| ||    
T  4619822 taagcacttgcaacactgtttgggagagcttatgaaaacaactaatgacatgttcataagctggtttcaccttatttccataagttctccatgatagctt 4619723  T
Q  734 atgaa 738  Q
    |||||    
T  4619722 atgaa 4619718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 646 - 721
Target Start/End: Complemental strand, 8090039 - 8089964
Alignment:
Q  646 agactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctct 721  Q
    ||||||||||||| || ||||||||||||||||||| || ||| ||||||||||||| ||| |||  |||||||||    
T  8090039 agactatttgagagagcttatgaaaacaacttatgatatattcctaagctgttttcagcttattttcataagctct 8089964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 669 - 791
Target Start/End: Original strand, 15003504 - 15003626
Alignment:
Q  669 aaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatg-aaactatttatagcttatataaaagtagttt 767  Q
    |||||||||| |||||||||||||| ||||||| | || |||| ||||||||||  |||||| ||||| |||| | ||||||||||||| ||   || ||    
T  15003504 aaacaacttacgacatgttcgtaagttgttttcgatttatttccataagctctcttggatagcttatgaaaaccacttatagcttatatgaagagag-tt 15003602  T
Q  768 tgactttattttatcttctgttat 791  Q
    ||| ||||||||||||| ||||||    
T  15003603 tgattttattttatcttttgttat 15003626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 664 - 739
Target Start/End: Original strand, 17258868 - 17258943
Alignment:
Q  664 tatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    |||||||| | |||||||||||||| ||||||||||||| ||| |||  |||||||||  ||||||||||||||||    
T  17258868 tatgaaaatagcttatgacatgttcataagctgttttcagcttattttcataagctcttcaggatagtttatgaaa 17258943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 641 - 800
Target Start/End: Original strand, 37526161 - 37526320
Alignment:
Q  641 ttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatg-aaa 739  Q
    |||| ||||| ||||||| || ||||||| ||||| |||||||||||  ||||||||||||| ||| |||| |||||||||| || | |  ||||| |||    
T  37526161 ttgtgagactgtttgagagagcttatgaatacaacctatgacatgttaataagctgttttcagcttatttccataagctctccagaacaacttatgaaaa 37526260  T
Q  740 ctatttatagcttatat-aaaagtagttttgactttattttatcttctgttataaaaataac 800  Q
    | | ||||||||||||| |||| |  |||||| || |||||||||| | ||||| |||||||    
T  37526261 caacttatagcttatatgaaaact--ttttgatttgattttatcttttattatagaaataac 37526320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 641 - 800
Target Start/End: Original strand, 37588322 - 37588481
Alignment:
Q  641 ttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatg-aaa 739  Q
    |||| ||||| ||||||| || ||||||| ||||| ||||| |||||  ||||||||||||| ||| |||| |||||||||| || |||  ||||| |||    
T  37588322 ttgtgagactgtttgagagagcttatgaatacaacctatgaaatgttaataagctgttttcagcttatttccataagctctccagaataacttatgaaaa 37588421  T
Q  740 ctatttatagcttatat-aaaagtagttttgactttattttatcttctgttataaaaataac 800  Q
    | | ||||||||||||| |||| |  |||||| || |||||||||| | ||||| |||||||    
T  37588422 caacttatagcttatatgaaaact--ttttgatttgattttatcttttattatagaaataac 37588481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 646 - 798
Target Start/End: Complemental strand, 35960516 - 35960365
Alignment:
Q  646 agactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa-ctatt 744  Q
    ||||||||||||| || ||||| || ||||||| ||||||| | |||| |||||| | ||| ||||| || ||| || ||||||| |||||||| | | |    
T  35960516 agactatttgagagagcttatggaagcaacttacgacatgtccataagatgtttttagcttatttctttacgctttccaggatagcttatgaaatcaact 35960417  T
Q  745 tatagcttatataaaagtagttttgactttattttatcttctgttataaaaata 798  Q
    ||||| |||||| ||| ||| ||||||||||||||||||| | ||||| |||||    
T  35960416 tatagtttatatgaaa-tag-tttgactttattttatcttttattatagaaata 35960365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 641 - 722
Target Start/End: Original strand, 37690598 - 37690679
Alignment:
Q  641 ttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctc 722  Q
    |||| ||||| ||||||| || ||||||| ||||| |||||||||||  ||||||||||||| ||| |||| ||||||||||    
T  37690598 ttgtgagactgtttgagagagcttatgaatacaacctatgacatgttaataagctgttttcagcttatttccataagctctc 37690679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 634 - 702
Target Start/End: Original strand, 11700333 - 11700401
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttca 702  Q
    ||||||||||| ||||||||   || |||||||| |||||||||||||||||| | |||||||||||||    
T  11700333 taagcacttgtgagactattgaggagagtttatggaaacaacttatgacatgtccataagctgttttca 11700401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 663 - 739
Target Start/End: Complemental strand, 17368762 - 17368686
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    |||||||||||||||||||||||||| || || ||||||| ||| |||| |||| ||||| | ||||| ||||||||    
T  17368762 ttatgaaaacaacttatgacatgttcatatgcagttttcagcttatttccataacctctccaagatagcttatgaaa 17368686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 660 - 739
Target Start/End: Original strand, 40205055 - 40205134
Alignment:
Q  660 agtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    |||||||  ||||| ||||| |||||| | ||| ||||||||| ||| ||||||||||||||| ||||||| ||||||||    
T  40205055 agtttatataaacagcttataacatgtccataatctgttttcagcttatttctataagctctccaggatagcttatgaaa 40205134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 637 - 719
Target Start/End: Original strand, 12595674 - 12595756
Alignment:
Q  637 gcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagct 719  Q
    |||||||| ||||||||||||| || ||| | ||||| |||||  ||||||| ||||| ||||||| ||| ||||||||||||    
T  12595674 gcacttgtgagactatttgagagagcttaaggaaacagcttattgcatgttcataagccgttttcagcttatttctataagct 12595756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 678 - 740
Target Start/End: Complemental strand, 19369384 - 19369322
Alignment:
Q  678 atgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaac 740  Q
    |||||||||  ||||||||||||||| || |||||||||||||||  ||| ||||||||||||    
T  19369384 atgacatgtctgtaagctgttttcaatttatttctataagctctctgggaaagtttatgaaac 19369322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 744 - 821
Target Start/End: Original strand, 35135728 - 35135804
Alignment:
Q  744 ttatagcttatataaaagtagttttgactttattttatcttctgttataaaaataaccagtacataaacatttatatg 821  Q
    ||||||||||||| ||| |||||| |||||||||||||||| ||||||| ||||| |   |||||||||| |||||||    
T  35135728 ttatagcttatatgaaaatagttt-gactttattttatcttttgttatagaaatatcttatacataaacacttatatg 35135804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 663 - 700
Target Start/End: Original strand, 37794682 - 37794719
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgtttt 700  Q
    |||||||||||||||||||||||||| |||||||||||    
T  37794682 ttatgaaaacaacttatgacatgttcataagctgtttt 37794719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 678 - 739
Target Start/End: Original strand, 40864428 - 40864489
Alignment:
Q  678 atgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    |||||||||| ||||| | |||| ||||| |||||||||| |||||||||||| ||||||||    
T  40864428 atgacatgtttgtaagttttttttaacttatttctataaggtctcaaggatagattatgaaa 40864489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 634 - 730
Target Start/End: Original strand, 28586721 - 28586817
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatag 730  Q
    |||||| |||| | ||| |||| || || ||||| ||| | |||||||||| | ||||||||||||||| ||| |||| |||||||||| |||||||    
T  28586721 taagcatttgtgaaactgtttgggagagcttatggaaatagcttatgacatatccgtaagctgttttcagcttatttcgataagctctctaggatag 28586817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 663 - 798
Target Start/End: Complemental strand, 34690959 - 34690825
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatga-aactatttatagcttatataaaag 761  Q
    |||| ||||||| || |||||||| | |||| |||| || |||| |||| |||||||||| | ||| | |||||| ||| | |||||||| |||| ||||    
T  34690959 ttataaaaacaaattgtgacatgtccataagttgttatcgacttatttccataagctctccaagatggcttatgagaacaacttatagct-atatgaaag 34690861  T
Q  762 tagttttgactttattttatcttctgttataaaaata 798  Q
    || || ||||||||||||||||| ||||||| |||||    
T  34690860 ta-ttgtgactttattttatcttttgttatagaaata 34690825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 747 - 799
Target Start/End: Original strand, 39823190 - 39823241
Alignment:
Q  747 tagcttatataaaagtagttttgactttattttatcttctgttataaaaataa 799  Q
    |||||||||| |||||||||| |||||||||||||||| ||||||| ||||||    
T  39823190 tagcttatatgaaagtagttt-gactttattttatcttttgttatataaataa 39823241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 744 - 795
Target Start/End: Original strand, 583839 - 583889
Alignment:
Q  744 ttatagcttatataaaagtagttttgactttattttatcttctgttataaaa 795  Q
    ||||||||||||| |||  ||||| |||||||||||||||||||||||||||    
T  583839 ttatagcttatatgaaaacagttt-gactttattttatcttctgttataaaa 583889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 672 - 739
Target Start/End: Complemental strand, 4855775 - 4855708
Alignment:
Q  672 caacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    |||||||||||||||||  |||||||||||  ||| ||||| ||||||||   |||||||||||||||    
T  4855775 caacttatgacatgttcagaagctgttttcggcttatttctgtaagctctttgggatagtttatgaaa 4855708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 653 - 736
Target Start/End: Original strand, 36542256 - 36542339
Alignment:
Q  653 ttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatg 736  Q
    |||||| | |||||| ||||| |||||||||||| |  |||||||||| ||||| |||| | |||||||| ||||||| |||||    
T  36542256 ttgagagattttatggaaacatcttatgacatgtccagaagctgtttttaacttatttccacaagctctctaggatagcttatg 36542339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 660 - 739
Target Start/End: Complemental strand, 36638836 - 36638757
Alignment:
Q  660 agtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    |||||||||||||    |||||||||||| |||||| |||||| ||| |||| |||||||||| ||||||  ||||||||    
T  36638836 agtttatgaaaactgtgtatgacatgttcataagcttttttcagcttatttccataagctctctaggataacttatgaaa 36638757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 766 - 828
Target Start/End: Original strand, 17756816 - 17756878
Alignment:
Q  766 tttgactttattttatcttctgttataaaaataaccagtacataaacatttatatgataaaca 828  Q
    ||||||||||||||||||||||||| | ||| |||   ||||||| || ||||||||||||||    
T  17756816 tttgactttattttatcttctgttaaagaaacaactcatacataagcacttatatgataaaca 17756878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 675 - 756
Target Start/End: Original strand, 32408588 - 32408670
Alignment:
Q  675 cttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaacta-tttatagcttatat 756  Q
    |||||||||||| |||||| || ||||  ||| |||| |||||||||  ||||||| |||||||| || ||||||||||||||    
T  32408588 cttatgacatgtccgtaagttggtttctgcttatttccataagctcttcaggatagcttatgaaaatagtttatagcttatat 32408670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 669 - 739
Target Start/End: Original strand, 41957441 - 41957511
Alignment:
Q  669 aaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    ||||| |||||||||||| | |||| |||||||| ||| |||  ||||| |||||||||||| ||||||||    
T  41957441 aaacagcttatgacatgtccataagttgttttcatcttattttcataagttctcaaggatagcttatgaaa 41957511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 663 - 700
Target Start/End: Original strand, 37489066 - 37489103
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgtttt 700  Q
    |||||||||||||||||||||||||  |||||||||||    
T  37489066 ttatgaaaacaacttatgacatgttgataagctgtttt 37489103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 676 - 721
Target Start/End: Original strand, 42375302 - 42375347
Alignment:
Q  676 ttatgacatgttcgtaagctgttttcaacttgtttctataagctct 721  Q
    ||||| |||||| |||||||||||| ||||| ||||||||||||||    
T  42375302 ttatggcatgtttgtaagctgtttttaacttatttctataagctct 42375347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 646 - 739
Target Start/End: Original strand, 7918413 - 7918506
Alignment:
Q  646 agactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    ||||| |||| || || |||||||||||||||| ||||||||| |||||||||| |||||| |||| |||||||||| | ||||| ||| ||||    
T  7918413 agactgtttgggagagcttatgaaaacaacttaagacatgttcataagctgtttccaacttatttcaataagctctccaagatagcttacgaaa 7918506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 765 - 826
Target Start/End: Complemental strand, 29699238 - 29699177
Alignment:
Q  765 ttttgactttattttatcttctgttataaaaataaccagtacataaacatttatatgataaa 826  Q
    |||||||||||||||||||| ||||||| |||||||  |||||||| |||||||||||||||    
T  29699238 ttttgactttattttatcttttgttatagaaataacttgtacataagcatttatatgataaa 29699177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 663 - 739
Target Start/End: Complemental strand, 14949952 - 14949876
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    ||||||||| |||||||||||||| | ||||||||||||| ||| ||||||||| ||||  ||||||| ||||||||    
T  14949952 ttatgaaaataacttatgacatgtccataagctgttttcagcttatttctataatctctttaggatagcttatgaaa 14949876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 665 - 783
Target Start/End: Original strand, 42215292 - 42215410
Alignment:
Q  665 atgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaacta-tttatagcttatataaaagta 763  Q
    ||||||||| |||||||| ||||| ||||||||||||| ||| |||  |||||||||| |||||||  ||||||| ||  |||||| ||||| ||||  |    
T  42215292 atgaaaacagcttatgacttgttcataagctgttttcagcttatttacataagctctccaggatagcatatgaaaataggttatagattatacaaaaaca 42215391  T
Q  764 gttttgactttattttatct 783  Q
    | ||||||||||||||||||    
T  42215392 g-tttgactttattttatct 42215410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 663 - 760
Target Start/End: Complemental strand, 8629542 - 8629445
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaactatttatagcttatataaaa 760  Q
    ||||||||||||||||||||||| || |||| |||||||||||| | | ||||||||||   | |||| | ||||||| | ||||||||| |||||||    
T  8629542 ttatgaaaacaacttatgacatgatcataagttgttttcaacttctatttataagctctacggtatagctaatgaaacaacttatagcttttataaaa 8629445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 662 - 739
Target Start/End: Original strand, 39551192 - 39551269
Alignment:
Q  662 tttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    |||||| |||||||||||||||||| |  |||||||||| ||||| ||| ||||||||||| |||| || ||||||||    
T  39551192 tttatggaaacaacttatgacatgtccaaaagctgtttttaacttatttttataagctctccaggaaagcttatgaaa 39551269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 638 - 722
Target Start/End: Complemental strand, 9700112 - 9700028
Alignment:
Q  638 cacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctc 722  Q
    ||||||| ||||||||||||| || || ||||| ||| ||||||||||| | ||||||||||||| ||| |||  ||||||||||    
T  9700112 cacttgtgagactatttgagagagcttgtgaaatcaatttatgacatgtccataagctgttttcaccttattttcataagctctc 9700028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 635 - 722
Target Start/End: Complemental strand, 27646018 - 27645931
Alignment:
Q  635 aagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctc 722  Q
    ||||| |||||||||  ||||||| || ||||| | |||||||||||||| |   |||||| |||||||||| |||||||||||||||    
T  27646018 aagcatttgtaagaccgtttgagagagcttatgcatacaacttatgacatatctataagctattttcaacttatttctataagctctc 27645931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 657 - 790
Target Start/End: Complemental strand, 29973174 - 29973040
Alignment:
Q  657 gatagtttatgaaaacaacttatgacatgttcgtaagctg-ttttcaacttgtttctataagctctcaaggatagtttatg-aaactatttatagcttat 754  Q
    ||||| || ||||||||||||| ||||||| |  |||||| ||||||  || |||| |||| ||||||||||||| ||||| |||| | |||||||||||    
T  29973174 gatagcttgtgaaaacaacttacgacatgtccaaaagctggttttcagtttatttccataaactctcaaggatagcttatgaaaacaacttatagcttat 29973075  T
Q  755 ataaaagtagttttgactttattttatcttctgtta 790  Q
     | ||| ||| ||||||||||||||| ||| |||||    
T  29973074 gtgaaaatag-tttgactttattttaccttgtgtta 29973040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 668 - 753
Target Start/End: Original strand, 5499037 - 5499122
Alignment:
Q  668 aaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaactat-ttatagctta 753  Q
    ||||||||||||||| ||||| |||||  |||| | ||| ||| ||||||||||| || ||||||||||||||||| ||||||||||    
T  5499037 aaaacaacttatgac-tgttcataagccatttttagcttatttttataagctctctagaatagtttatgaaactatcttatagctta 5499122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 708 - 797
Target Start/End: Complemental strand, 10437925 - 10437837
Alignment:
Q  708 tttctataagctctcaaggatagtttatgaaac-tatttatagcttatataaaagtagttttgactttattttatcttctgttataaaaat 797  Q
    ||||||||||||||| | ||||| ||||||||| || ||| |||||||||||||  ||||| |||||||||||||||| ||||||| ||||    
T  10437925 tttctataagctctcgaagatagcttatgaaacctacttaaagcttatataaaac-agttt-gactttattttatcttttgttatagaaat 10437837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 663 - 736
Target Start/End: Original strand, 2458550 - 2458623
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatg 736  Q
    ||||||| ||| |||||| ||||||| |||||||||||||  || |||| |||||||||| ||||||| |||||    
T  2458550 ttatgaagacagcttatggcatgttcataagctgttttcagtttatttccataagctctctaggatagcttatg 2458623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 667 - 740
Target Start/End: Complemental strand, 3254307 - 3254234
Alignment:
Q  667 gaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaac 740  Q
    ||||||| |||||||||||||| ||||||||||||| ||| ||||||||  ||||  ||||||| |||| ||||    
T  3254307 gaaaacagcttatgacatgttcataagctgttttcagcttatttctatacactctataggatagcttataaaac 3254234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 634 - 739
Target Start/End: Original strand, 13000379 - 13000484
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagttt 733  Q
    ||||||||||| ||||||||||  | ||||||||  ||||||||||||||||| |  ||| |||||||| ||| |||| ||||||| |  | || |||||    
T  13000379 taagcacttgtgagactatttgcaagagtttatggtaacaacttatgacatgtccacaagttgttttcagcttatttccataagctttgcatgacagttt 13000478  T
Q  734 atgaaa 739  Q
    ||||||    
T  13000479 atgaaa 13000484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 641 - 722
Target Start/End: Complemental strand, 30918220 - 30918140
Alignment:
Q  641 ttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctc 722  Q
    |||| ||||| ||||||| || ||||||||||||||| |||||| ||| |||| |||||||| ||| |||| ||||||||||    
T  30918220 ttgtgagactgtttgagagagcttatgaaaacaacttgtgacat-ttcataagttgttttcagcttatttccataagctctc 30918140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 663 - 739
Target Start/End: Complemental strand, 10383971 - 10383895
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    ||||||||||| |||||||||| ||| |||||||||| || ||| |||| |||||||||  | ||||||||| ||||    
T  10383971 ttatgaaaacagcttatgacattttcataagctgtttacagcttatttccataagctctatatgatagtttacgaaa 10383895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 663 - 739
Target Start/End: Complemental strand, 12851262 - 12851186
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 739  Q
    ||||||||||| ||||| |||||||| |||| |||||||  ||| |||  ||||||||||||||| || ||||||||    
T  12851262 ttatgaaaacagcttataacatgttcataagatgttttcggcttattttcataagctctcaaggaaagcttatgaaa 12851186  T

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Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 675 - 735
Target Start/End: Complemental strand, 20672824 - 20672764
Alignment:
Q  675 cttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttat 735  Q
    |||||||||||||| ||||||||||||| ||| |||  |||||||||| ||||||| ||||    
T  20672824 cttatgacatgttcataagctgttttcagcttattttcataagctctccaggatagcttat 20672764  T

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Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 663 - 710
Target Start/End: Complemental strand, 3090232 - 3090185
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgttt 710  Q
    |||||||||||||||||| |||||  |||||||||||||| |||||||    
T  3090232 ttatgaaaacaacttatggcatgtcagtaagctgttttcagcttgttt 3090185  T

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Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 638 - 800
Target Start/End: Complemental strand, 31862603 - 31862442
Alignment:
Q  638 cacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatga 737  Q
    ||||||| ||||| ||||||| |||| | | || ||||||||||| | | | ||||||||||||| ||| |||  |||||||||| ||||||  ||||||    
T  31862603 cacttgttagactgtttgagagagtt-acggaagcaacttatgacctatgcataagctgttttcagcttattttcataagctctctaggataacttatga 31862505  T
Q  738 aactat-ttatagcttatataaaagtagttttgactttattttatcttctgttataaaaataac 800  Q
    ||  || ||||||||||||  | | ||| ||||||||||| ||||||| ||||||  |||||||    
T  31862504 aaacatcttatagcttatacgagaatag-tttgactttatattatcttttgttattgaaataac 31862442  T

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Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 663 - 710
Target Start/End: Complemental strand, 39049358 - 39049311
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgttt 710  Q
    ||||||||||||||||| ||||||   |||||||||||||||||||||    
T  39049358 ttatgaaaacaacttataacatgtcaataagctgttttcaacttgttt 39049311  T

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Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 663 - 706
Target Start/End: Original strand, 43368684 - 43368727
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaactt 706  Q
    |||||||||||||||||||||||||| | |||| ||||||||||    
T  43368684 ttatgaaaacaacttatgacatgttcattagctattttcaactt 43368727  T

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Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 766 - 828
Target Start/End: Original strand, 2364560 - 2364622
Alignment:
Q  766 tttgactttattttatcttctgttataaaaataaccagtacataaacatttatatgataaaca 828  Q
    ||||||||||||||||||| || |||||||||| |   |||||||| | ||||||||||||||    
T  2364560 tttgactttattttatcttttgctataaaaatagcgtatacataaatagttatatgataaaca 2364622  T

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Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 663 - 717
Target Start/End: Original strand, 9835884 - 9835938
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataag 717  Q
    ||||| ||||| |||||||||||||| ||||||||||||| ||| |||| |||||    
T  9835884 ttatgtaaacagcttatgacatgttcataagctgttttcatcttatttccataag 9835938  T

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Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 634 - 688
Target Start/End: Original strand, 30191096 - 30191150
Alignment:
Q  634 taagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgttc 688  Q
    ||||||||||| ||||| |||| || || ||||| ||||||||||||||||||||    
T  30191096 taagcacttgttagactgtttgggagagcttatggaaacaacttatgacatgttc 30191150  T

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Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 652 - 734
Target Start/End: Original strand, 31875568 - 31875650
Alignment:
Q  652 tttgagatagtttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagttta 734  Q
    ||||||| || ||||| |||||||||||||||||| | |||||  |||||||||| |||  |||||||||  | |||||||||    
T  31875568 tttgagaaagcttatggaaacaacttatgacatgtccataagccattttcaacttattttcataagctcttgaagatagttta 31875650  T

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Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 679 - 792
Target Start/End: Original strand, 33714236 - 33714348
Alignment:
Q  679 tgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaacta-tttatagcttatataaaagtagttttgactttatt 777  Q
    |||| ||||| ||||||||||||| ||| ||| |||||||||||   ||||| |||||||| ||  |||||| || || |||| ||| ||||||||||||    
T  33714236 tgacttgttcataagctgttttcagcttatttttataagctctcccagatagcttatgaaaatagcttatagattgtacaaaa-tag-tttgactttatt 33714333  T
Q  778 ttatcttctgttata 792  Q
    ||||||| |||||||    
T  33714334 ttatcttgtgttata 33714348  T

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Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 667 - 729
Target Start/End: Original strand, 41606891 - 41606953
Alignment:
Q  667 gaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggata 729  Q
    ||||||| ||||||||||||||  ||| |||||||| ||| |||| |||||||||| ||||||    
T  41606891 gaaaacagcttatgacatgttcaaaagttgttttcagcttatttccataagctctctaggata 41606953  T

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Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 662 - 711
Target Start/End: Complemental strand, 926562 - 926513
Alignment:
Q  662 tttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttc 711  Q
    ||||| ||||||||||||||||||||| ||||| ||||||| ||| ||||    
T  926562 tttatcaaaacaacttatgacatgttcataagccgttttcagcttatttc 926513  T

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Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 663 - 728
Target Start/End: Complemental strand, 5088938 - 5088873
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggat 728  Q
    ||||| |||||  |||| |||||| | ||||||||||||||||| |||| |||||||||| |||||    
T  5088938 ttatggaaacagtttataacatgtccataagctgttttcaacttatttcaataagctctccaggat 5088873  T

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Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 662 - 703
Target Start/End: Original strand, 29262857 - 29262898
Alignment:
Q  662 tttatgaaaacaacttatgacatgttcgtaagctgttttcaa 703  Q
    |||||| |||||||||||||||||||| |||||| |||||||    
T  29262857 tttatggaaacaacttatgacatgttcataagctattttcaa 29262898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 657 - 702
Target Start/End: Original strand, 36626435 - 36626480
Alignment:
Q  657 gatagtttatgaaaacaacttatgacatgttcgtaagctgttttca 702  Q
    |||||||||| ||||||||||||||||| ||  |||||||||||||    
T  36626435 gatagtttataaaaacaacttatgacatatttataagctgttttca 36626480  T

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Target: scaffold0254 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 679 - 738
Target Start/End: Original strand, 2612 - 2671
Alignment:
Q  679 tgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaa 738  Q
    |||||||||| |||||| ||||  ||||||||  |||||||||| |||||||||||||||    
T  2612 tgacatgttcctaagctatttttcacttgttttcataagctctccaggatagtttatgaa 2671  T

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Target: scaffold0024 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 766 - 825
Target Start/End: Complemental strand, 27559 - 27500
Alignment:
Q  766 tttgactttattttatcttctgttataaaaataaccagtacataaacatttatatgataa 825  Q
    ||||||||||||||||||||||||||| |||||||   ||||||| || ||| |||||||    
T  27559 tttgactttattttatcttctgttatagaaataacttatacataagcacttacatgataa 27500  T

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Target: scaffold0004 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 662 - 716
Target Start/End: Original strand, 98623 - 98677
Alignment:
Q  662 tttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataa 716  Q
    |||| ||||| | |||||||||||||| ||||||||||||||||| |||| ||||    
T  98623 tttacgaaaatagcttatgacatgttcataagctgttttcaacttatttcaataa 98677  T

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Target: scaffold0608 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 663 - 700
Target Start/End: Original strand, 9621 - 9658
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgtttt 700  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  9621 ttatgaaaacaacttattacatgttcataagctgtttt 9658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 663 - 736
Target Start/End: Complemental strand, 5045 - 4972
Alignment:
Q  663 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatg 736  Q
    ||||||||||| |||||||||||| | ||||||| ||| | ||| |||||||||||| |  | |||||||||||    
T  5045 ttatgaaaacagcttatgacatgtccataagctgattttagcttatttctataagctatacatgatagtttatg 4972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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