View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5694-Insertion-1 (Length: 80)
Name: NF5694-Insertion-1
Description: NF5694
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5694-Insertion-1 |
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Alignment Details
Target: chr2 (Bit Score: 60; Significance: 3e-26; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 60; E-Value: 3e-26
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 14190886 - 14190827
Alignment:
| Q |
10 |
aagatgacaatgccactccagaaacacatcccctcaacttcaggcctcctaaagacatcc |
69 |
Q |
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| T |
14190886 |
aagatgacaatgccactccagaaacacatcccctcaacttcaggcctcctaaagacatcc |
14190827 |
T |
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Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 6337064 - 6337013
Alignment:
| Q |
10 |
aagatgacaatgccactccagaaacacatcccctcaacttcaggcctcctaa |
61 |
Q |
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||||||||| ||||||||||||||||||||| || ||||||| |||||||| |
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| T |
6337064 |
aagatgacactgccactccagaaacacatccacttaacttcatacctcctaa |
6337013 |
T |
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