View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5698_high_6 (Length: 266)
Name: NF5698_high_6
Description: NF5698
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5698_high_6 |
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Alignment Details
Target: chr5 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 9 - 203
Target Start/End: Original strand, 16853252 - 16853446
Alignment:
| Q |
9 |
catcatcaatgcactaactgaatgtttggattcgcactgactttgacagaatcacagtatgccacgtaattttaataaaagctacacttttaagcttcaa |
108 |
Q |
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| T |
16853252 |
catcatcaatgcactaactgaatgtttggattcgcactgactttgacagaatcacagtatgccaagtaattttaataaaagctacacttttaagcttcaa |
16853351 |
T |
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| Q |
109 |
taaaatgaaagtgctgcttcgtcaaactcagtgcgaatccaaacatgtccgaatactaatcactgcataaattcaattcaataaataagaggaac |
203 |
Q |
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||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
16853352 |
taaaatgaaagtgctacttcctcaaactcagtgcgaatccaaacatgtccgaatactaatcactgcataaattcaattcaacaaataagaggaac |
16853446 |
T |
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