View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5698_high_7 (Length: 251)
Name: NF5698_high_7
Description: NF5698
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5698_high_7 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 43144275 - 43144525
Alignment:
| Q |
1 |
agtaaaattatgaatagttggactcaaataattaataatagctttttatttgagtatgggttgtaattaaggatacgttaattagtgattaaatgaagtt |
100 |
Q |
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| T |
43144275 |
agtaaaattatgaatagttggactcaaataattaataatagctttttatttgagtatgggttgtaattaaggatacgttaattagtgattaaatgaagtt |
43144374 |
T |
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| Q |
101 |
ttgggtaatttataatagtagacgtgattaatttggcagaaacaaagttggatgatgacagaacaacacgatgcgtgcgacatgaagtatgtgtttcatg |
200 |
Q |
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| T |
43144375 |
ttgggtaatttataatagtagacgtgattaatttggcaggaaaaacgttggatgatgacagaacaacacgatgcgtgcgacatgaagtatgtgtttcatg |
43144474 |
T |
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| Q |
201 |
tcacactttagtatattctggaaagagtgtggcatagactaagttatcagt |
251 |
Q |
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| T |
43144475 |
tcacactttagtatattctgaaaagagtgtggcatagactaagttatcagt |
43144525 |
T |
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