View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5698_high_8 (Length: 240)
Name: NF5698_high_8
Description: NF5698
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5698_high_8 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 36423311 - 36423550
Alignment:
| Q |
1 |
tgaaaccgatataaggtgtaactgtgttggttgatatggataagagagatgttgtgtccattacagataatggactaaacattcctgtcgcaaatggtat |
100 |
Q |
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| T |
36423311 |
tgaaaccgatagaaggtttaactgtgttggttgatatggataagagagaggttgtgtccattacagataatggactaaacattcctgtcgcaaatggtat |
36423410 |
T |
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| Q |
101 |
cgacactgattaccgttactcagttcagaaactcaacggagagttgaacttgataaatccaatttccttggaacaaccaaaaggtccaagctttacagtt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36423411 |
cgacactgattaccgttactcagttcagaaactcaacggagagttgaacttgataaatccaatttccttggaacaaccaaaaggtccaagctttacagtt |
36423510 |
T |
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| Q |
201 |
gatggacatttggtgaaatgggctaattgggaatttcatc |
240 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
36423511 |
gatggacatttggtgaaatgggctaattgggaatttcatc |
36423550 |
T |
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