View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5700-Insertion-3 (Length: 1011)
Name: NF5700-Insertion-3
Description: NF5700
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5700-Insertion-3 |
 | |
|
| [»] chr6 (19 HSPs) |
| |
|
Alignment Details
Target: chr6 (Bit Score: 483; Significance: 0; HSPs: 19)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 483; E-Value: 0
Query Start/End: Original strand, 450 - 1011
Target Start/End: Original strand, 2909848 - 2910410
Alignment:
| Q |
450 |
ctcatcattatgacctttctccttgttcttcattgtttggccagtgaaatctagggaacaatcaatatcgtcaataactataatcgatttacctgatgtc |
549 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
2909848 |
ctcatcattatgacctttctcctttttcttcattctttggccagtgaaatctagagaacaatcaatatcgtcaataactataatcgatttactcgatgtc |
2909947 |
T |
|
| Q |
550 |
tcaatcaaaagtcttttcaactcatagttatccttgacaattgttaattcaagatcataaacgtcatagttcatgaaattcgcaatagcagatatcatgg |
649 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2909948 |
tcaatcaaaagtcttttcaactcatagttatccttgacaattgttaattgaagatcataaacgtcatagttcatgaaattcgcaatagcagatatcatgg |
2910047 |
T |
|
| Q |
650 |
tagattttccggttcctggtggaccataaactagataaccacgtttccacgcctttccaactttagcataatacactttcccattcttgaatttaacaag |
749 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
2910048 |
tagattttccggttcctggtggaccataaactagataaccacgtttccacgcctttccaactttagcataatactctttccctttcttgaatttaacaag |
2910147 |
T |
|
| Q |
750 |
atcgtttatgatctattccttcttctccggttccatagcaagtgtttcaaaccttgcagggtgctcaaaagttgtgcgactccactttgatttgt--tac |
847 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |
|
|
| T |
2910148 |
atcgtttatgatctcttccttcttctccggttccatagcaagtgtttcaaaccttgcagggtgctcaaaagttgtgtgactccactttgatttgttatac |
2910247 |
T |
|
| Q |
848 |
atcccagccaatcatcgcttggtttattagtgtaaagctttagctgcctcttcttctttgcaatagttttttcccttgttctaacacatgttggatgtac |
947 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||| |
|
|
| T |
2910248 |
atcccagccaatcatcgcttggtttgttagtgtaaagctttagctgcctcttcttctgtgcaataggtttt--ccttgttctaacacatgttggatgtac |
2910345 |
T |
|
| Q |
948 |
gaggtagtgatgagatcaccatgccttttgtcgaagg-tagggttaggtatcttatcacatccga |
1011 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
2910346 |
gaggtagtgatgagatcaccatgccttttgtcgaaggttagggttaggtatcttatcacatccga |
2910410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 359; E-Value: 0
Query Start/End: Original strand, 8 - 390
Target Start/End: Original strand, 2909391 - 2909772
Alignment:
| Q |
8 |
ttctttgcatcctccttttcctttttctttgaaatctcaagagattgaatcaaattcttcaagcaagtctcaacatcttcaatgatcgtctttggcatca |
107 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2909391 |
ttctttgcatcctccttttcctttttctttgaaatctcaagagattgaatcaaattcttcacgcaagtctcaacatcttcaatgatcgtctttggcatca |
2909490 |
T |
|
| Q |
108 |
aattctcagcaacatcagccggtgtcatattagtctctcccaacaacttttcaataattggaaacaaatcatcatgcgactcaacatctaagtagttctt |
207 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
2909491 |
aattctcagcaacatcagcaggtgtcatattagtctctcccaacaacttttcaataattggaaacaaatcatcatgagactcaacatctaagtagttctt |
2909590 |
T |
|
| Q |
208 |
tgcaagcatcttgaacacttgatagctacaataggacatttcaatgtgcatatccatccttcccctccttataagagcaggatcaagtttgtccacaaaa |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2909591 |
tgcaagcatcttgaacacttgatagctacaataggacatttcaatgtgcatatccatccttcccctccttataagagcaggatcaagtttgtccacaaaa |
2909690 |
T |
|
| Q |
308 |
ttagttgtgaaaattatgatcctttctcctccacatgttgaccaaattccatcaataaaattcaacaaacccgaatgagttac |
390 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
2909691 |
ttagttgtg-aaattatgatcctttctcctccacatgttgaccaaattccatcaataaaattcaacaaacccgaatgtgttac |
2909772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 8 - 390
Target Start/End: Original strand, 2859948 - 2860330
Alignment:
| Q |
8 |
ttctttgcatcctccttttcctttttctttgaaatctcaagagattgaatcaaattcttcaagcaagtctcaacatcttcaatgatcgtctttggcatca |
107 |
Q |
| |
|
|||||||| ||||||| |||||||| ||||| ||| |||||| |||||||||||||||||||||||| |||||||||||| || ||| ||||||||||| |
|
|
| T |
2859948 |
ttctttgcttcctcctcttccttttcctttgcaatttcaagatattgaatcaaattcttcaagcaagcctcaacatcttcggtggtcgactttggcatca |
2860047 |
T |
|
| Q |
108 |
aattctcagcaacatcagccggtgtcatattagtctctcccaacaacttttcaataattggaaacaaatcatcatgcgactcaacatctaagtagttctt |
207 |
Q |
| |
|
||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||| |
|
|
| T |
2860048 |
aattctcggcaacatcagctggtgacatattagtctctcccaacaacttttcaataattggaaacaaatcaccatgagactcaacatccaagtagttctt |
2860147 |
T |
|
| Q |
208 |
tgcaagcatcttgaacacttgatagctacaataggacatttcaatgtgcatatccatccttcccctccttataagagcaggatcaagtttgtccacaaaa |
307 |
Q |
| |
|
||||| | ||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||| || ||||||||||||||||||||||||||| |
|
|
| T |
2860148 |
agcaagaaccttgaacgcttgatagctacaataggacatttctatgtgtttatccatccttcccctcctaattagagcaggatcaagtttgtccacaaaa |
2860247 |
T |
|
| Q |
308 |
ttagttgtgaaaattatgatcctttctcctccacatgttgaccaaattccatcaataaaattcaacaaacccgaatgagttac |
390 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||| |
|
|
| T |
2860248 |
ttagttgtgaaaattatgatccgttctcctccacatgatgaccaaattccatcaatagaattcaacaaacccgaaagagttac |
2860330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 255; E-Value: 1e-141
Query Start/End: Original strand, 8 - 390
Target Start/End: Original strand, 2865333 - 2865715
Alignment:
| Q |
8 |
ttctttgcatcctccttttcctttttctttgaaatctcaagagattgaatcaaattcttcaagcaagtctcaacatcttcaatgatcgtctttggcatca |
107 |
Q |
| |
|
|||||||| ||||||| |||||||| ||||| ||| |||||| |||||||||||||||||||||||| |||||||||||| || ||| ||||||||||| |
|
|
| T |
2865333 |
ttctttgcttcctcctcttccttttcctttgcaatttcaagatattgaatcaaattcttcaagcaagcctcaacatcttcggtggtcgactttggcatca |
2865432 |
T |
|
| Q |
108 |
aattctcagcaacatcagccggtgtcatattagtctctcccaacaacttttcaataattggaaacaaatcatcatgcgactcaacatctaagtagttctt |
207 |
Q |
| |
|
||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||| |
|
|
| T |
2865433 |
aattctcggcaacatcagctggtgacatattagtctctcccaacaacttttcaataattggaaacaaatcaccatgagactcaacatccaagtagttctt |
2865532 |
T |
|
| Q |
208 |
tgcaagcatcttgaacacttgatagctacaataggacatttcaatgtgcatatccatccttcccctccttataagagcaggatcaagtttgtccacaaaa |
307 |
Q |
| |
|
||||| | |||||| ||||||| ||||||||||||||||| ||||| ||||||||||||||||||| || ||||||||||||||||||||||||||| |
|
|
| T |
2865533 |
agcaagaaccttgaatgcttgatatctacaataggacatttctatgtgtttatccatccttcccctcctaattagagcaggatcaagtttgtccacaaaa |
2865632 |
T |
|
| Q |
308 |
ttagttgtgaaaattatgatcctttctcctccacatgttgaccaaattccatcaataaaattcaacaaacccgaatgagttac |
390 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||| |
|
|
| T |
2865633 |
ttagttgtgaaaattatgatccgttctcctccacatgatgaccaaattccatcaatagaattcaacaaacccgaaagagttac |
2865715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 255; E-Value: 1e-141
Query Start/End: Original strand, 8 - 390
Target Start/End: Original strand, 2884523 - 2884905
Alignment:
| Q |
8 |
ttctttgcatcctccttttcctttttctttgaaatctcaagagattgaatcaaattcttcaagcaagtctcaacatcttcaatgatcgtctttggcatca |
107 |
Q |
| |
|
|||||||| ||||||| |||||||| ||||| ||| |||||| |||||||||||||||||||||||| |||| ||||||| || ||| ||||||||||| |
|
|
| T |
2884523 |
ttctttgcttcctcctcttccttttcctttgcaatttcaagatattgaatcaaattcttcaagcaagactcagcatcttcggtggtcgactttggcatca |
2884622 |
T |
|
| Q |
108 |
aattctcagcaacatcagccggtgtcatattagtctctcccaacaacttttcaataattggaaacaaatcatcatgcgactcaacatctaagtagttctt |
207 |
Q |
| |
|
||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||| |
|
|
| T |
2884623 |
aattctcggcaacatcagcaggtgacatattagtctctcccaacaacttttcaataattggaaacaaatcaccatgagactcaacatccaagtagttctt |
2884722 |
T |
|
| Q |
208 |
tgcaagcatcttgaacacttgatagctacaataggacatttcaatgtgcatatccatccttcccctccttataagagcaggatcaagtttgtccacaaaa |
307 |
Q |
| |
|
||||| | ||||||| ||||||| ||||||||||||||||| ||||| ||||||||||||||||||| || ||||||||||||||||||||||||||| |
|
|
| T |
2884723 |
agcaagaaccttgaacgcttgatatctacaataggacatttctatgtgtttatccatccttcccctcctaattagagcaggatcaagtttgtccacaaaa |
2884822 |
T |
|
| Q |
308 |
ttagttgtgaaaattatgatcctttctcctccacatgttgaccaaattccatcaataaaattcaacaaacccgaatgagttac |
390 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||| |
|
|
| T |
2884823 |
ttagttgtgaaaattatgatccgttctcctccacatgatgaccaaattccatcaatagaattcaacaaacccgaaagagttac |
2884905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 8 - 390
Target Start/End: Original strand, 2832684 - 2833066
Alignment:
| Q |
8 |
ttctttgcatcctccttttcctttttctttgaaatctcaagagattgaatcaaattcttcaagcaagtctcaacatcttcaatgatcgtctttggcatca |
107 |
Q |
| |
|
|||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| | |||| ||||||| |||| | ||||||||||| |
|
|
| T |
2832684 |
ttctttgcttcctcctcatcctttttctttgcaatctcaagagattgaatcaaattcttcaagcaactttcaaaatcttcagtgattgactttggcatca |
2832783 |
T |
|
| Q |
108 |
aattctcagcaacatcagccggtgtcatattagtctctcccaacaacttttcaataattggaaacaaatcatcatgcgactcaacatctaagtagttctt |
207 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| | |
|
|
| T |
2832784 |
aattctcagcaacatcagcaggtgtcatattagtctctcccaacaacttttcaataattggaaacaaatcatcatgagtctcaacatctaagtagtttct |
2832883 |
T |
|
| Q |
208 |
tgcaagcatcttgaacacttgatagctacaataggacatttcaatgtgcatatccatccttcccctccttataagagcaggatcaagtttgtccacaaaa |
307 |
Q |
| |
|
|||||| | |||||| |||||||||||||||| |||||||| || ||| ||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2832884 |
tgcaagaaccttgaaagcttgatagctacaataagacatttctatatgcttatccattcttcccctccttataagagcaggatcaagtttgtccacaaaa |
2832983 |
T |
|
| Q |
308 |
ttagttgtgaaaattatgatcctttctcctccacatgttgaccaaattccatcaataaaattcaacaaacccgaatgagttac |
390 |
Q |
| |
|
|| |||||||||||||| ||||| ||| |||||||| |||||||||||||||||| |||||||||||||| ||| ||||||| |
|
|
| T |
2832984 |
tttgttgtgaaaattattatcctctctgatccacatgctgaccaaattccatcaatgaaattcaacaaaccagaaagagttac |
2833066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 8 - 390
Target Start/End: Complemental strand, 2842936 - 2842554
Alignment:
| Q |
8 |
ttctttgcatcctccttttcctttttctttgaaatctcaagagattgaatcaaattcttcaagcaagtctcaacatcttcaatgatcgtctttggcatca |
107 |
Q |
| |
|
|||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| | |||| ||||||| |||| | ||||||||||| |
|
|
| T |
2842936 |
ttctttgcttcctcctcatcctttttctttgcaatctcaagagattgaatcaaattcttcaagcaactttcaaaatcttcagtgattgactttggcatca |
2842837 |
T |
|
| Q |
108 |
aattctcagcaacatcagccggtgtcatattagtctctcccaacaacttttcaataattggaaacaaatcatcatgcgactcaacatctaagtagttctt |
207 |
Q |
| |
|
|||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| | |
|
|
| T |
2842836 |
aattttcagcaacatcagcaggtgtcatattagtctcttccaacaacttttcaataattggaaataaatcatcatgaaactcaacatctaagtagtttct |
2842737 |
T |
|
| Q |
208 |
tgcaagcatcttgaacacttgatagctacaataggacatttcaatgtgcatatccatccttcccctccttataagagcaggatcaagtttgtccacaaaa |
307 |
Q |
| |
|
|||||| | ||| || |||||||||||||||| |||||||| || ||| ||||||| ||||| |||||||||||||||||||||||||| ||||||||| |
|
|
| T |
2842736 |
tgcaagaaccttaaaagcttgatagctacaataagacatttctatatgcttatccattcttcctctccttataagagcaggatcaagtttatccacaaaa |
2842637 |
T |
|
| Q |
308 |
ttagttgtgaaaattatgatcctttctcctccacatgttgaccaaattccatcaataaaattcaacaaacccgaatgagttac |
390 |
Q |
| |
|
||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
2842636 |
ttagttgtgaaaattatgatcctctctgatccacatgctgaccaaattccatcaataaaattcaacaaacccgaaagagttac |
2842554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 464 - 976
Target Start/End: Complemental strand, 2842482 - 2841972
Alignment:
| Q |
464 |
ctttctccttgttcttcattgtttggccagtgaaatctagggaacaatcaatatcgtcaataactataatcgatttacctgatgtctcaatcaaaagtct |
563 |
Q |
| |
|
||||||| || |||||| | |||| || |||| ||| || |||||||||||||| |||||||| ||||||||||||| || ||||||||||||||||| |
|
|
| T |
2842482 |
ctttctcttttttcttcttcctttgcccggtgagatcgagagaacaatcaatatcttcaataacaataatcgatttactcgacgtctcaatcaaaagtct |
2842383 |
T |
|
| Q |
564 |
tttcaactcatagttatccttgacaattgttaattcaagatcataaacgtcatagttcatgaaattcgcaatagcagatatcatggtagattttccggtt |
663 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||| ||||||||||||||||| |||||| |
|
|
| T |
2842382 |
tttcaactcattgttatccttgacaattgttaattcaagatcatacacatcatagttcatgaaattagcaatagccgatatcatggtagatttaccggtt |
2842283 |
T |
|
| Q |
664 |
cctggtggaccataaactagataaccacgtttccacgcctttccaactttagcataatacactttcccattcttgaatttaacaagatcgtttatgatct |
763 |
Q |
| |
|
||||| |||||| ||| |||||||||||||||||| || ||||||||||||||||||||| ||||||| |||||||||||||||||||| |||| |||| |
|
|
| T |
2842282 |
cctggaggaccaaaaagtagataaccacgtttccaagcttttccaactttagcataatactctttccctttcttgaatttaacaagatcatttagaatct |
2842183 |
T |
|
| Q |
764 |
attccttcttctccggttccatagcaagtgtttcaaaccttgcagggtgctcaaaagttgtgcgactccactttgatttgttacatcccagccaatcatc |
863 |
Q |
| |
|
||| ||||| | ||||||| ||||||||||||||| ||||| |||||||||||||||||| |||||||||||| | || | | | |||||||| |
|
|
| T |
2842182 |
cttctttcttttttggttccaaagcaagtgtttcaaaacttgccgggtgctcaaaagttgtgtgactccactttgtgcttctatacctaaaccaatcatt |
2842083 |
T |
|
| Q |
864 |
gcttggtttattagtgtaaagctttagctgcctcttcttctttgcaatagttttttcccttgttctaacacatgttggatgtacgaggtagtgatgagat |
963 |
Q |
| |
|
||||| || |||||||||| ||| | |||||| |||||| ||| |||| ||| |||||||| || |||||||| ||||| |||||||||||||| | |
|
|
| T |
2842082 |
acttggattgttagtgtaaatcttcaactgcctattcttcattgttatagccttt--ccttgttccaaaacatgttgtatgtaagaggtagtgatgagtt |
2841985 |
T |
|
| Q |
964 |
caccatgcctttt |
976 |
Q |
| |
|
||| ||||||||| |
|
|
| T |
2841984 |
cacgatgcctttt |
2841972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 8 - 390
Target Start/End: Complemental strand, 2829530 - 2829148
Alignment:
| Q |
8 |
ttctttgcatcctccttttcctttttctttgaaatctcaagagattgaatcaaattcttcaagcaagtctcaacatcttcaatgatcgtctttggcatca |
107 |
Q |
| |
|
|||||||| ||||||| ||||||||||||| | |||||||||||||||||||| ||||||| ||||| |||| ||||||| || | ||||||||||| |
|
|
| T |
2829530 |
ttctttgcttcctcctcatcctttttctttgcattctcaagagattgaatcaaactcttcaaacaagtttcaaaatcttcatcaattgactttggcatca |
2829431 |
T |
|
| Q |
108 |
aattctcagcaacatcagccggtgtcatattagtctctcccaacaacttttcaataattggaaacaaatcatcatgcgactcaacatctaagtagttctt |
207 |
Q |
| |
|
|||| |||||||||||||| |||||||||||||||| | ||||||| ||||||||||||||||| ||||||||||| ||||||||||| | |||||||| |
|
|
| T |
2829430 |
aattttcagcaacatcagcaggtgtcatattagtcttttccaacaatttttcaataattggaaataaatcatcatgagactcaacatcccaatagttctt |
2829331 |
T |
|
| Q |
208 |
tgcaagcatcttgaacacttgatagctacaataggacatttcaatgtgcatatccatccttcccctccttataagagcaggatcaagtttgtccacaaaa |
307 |
Q |
| |
|
|||||||| |||||| |||||||||||||||| |||||||| || ||| ||||||||||||||||||| || || |||||||||||||||||||||||| |
|
|
| T |
2829330 |
tgcaagcaccttgaaagcttgatagctacaataagacatttctatatgcttatccatccttcccctcctaattagggcaggatcaagtttgtccacaaaa |
2829231 |
T |
|
| Q |
308 |
ttagttgtgaaaattatgatcctttctcctccacatgttgaccaaattccatcaataaaattcaacaaacccgaatgagttac |
390 |
Q |
| |
|
|| |||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||| ||| ||||||| |
|
|
| T |
2829230 |
tttgttgtgaaaattatgatcctctctcctccacatgcagaccaaatcccatcaataaaattcaacaaaccagaaagagttac |
2829148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 505 - 834
Target Start/End: Original strand, 2860488 - 2860817
Alignment:
| Q |
505 |
gaacaatcaatatcgtcaataactataatcgatttacctgatgtctcaatcaaaagtcttttcaactcatagttatccttgacaattgttaattcaagat |
604 |
Q |
| |
|
|||||||||||||| |||||||| |||| ||||| | || |||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||| |
|
|
| T |
2860488 |
gaacaatcaatatcttcaataacgataactgatttgctcgacgtctcaatcaaaagtctttttaactcattgttatccttgacagttgttaattcaagat |
2860587 |
T |
|
| Q |
605 |
cataaacgtcatagttcatgaaattcgcaatagcagatatcatggtagattttccggttcctggtggaccataaactagataaccacgtttccacgcctt |
704 |
Q |
| |
|
|||| ||||| |||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||| | ||||||||| |||||||| ||||| |
|
|
| T |
2860588 |
catacacgtcgtagttcatgaaatttgcaatagcagatatcatggtagatttcccagttcctggtggaccatagagtagataaccccgtttccaagcctt |
2860687 |
T |
|
| Q |
705 |
tccaactttagcataatacactttcccattcttgaatttaacaagatcgtttatgatctattccttcttctccggttccatagcaagtgtttcaaacctt |
804 |
Q |
| |
|
||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
2860688 |
tccaactttagcataatactctttccctttcttgaatttaacaagatcgtttatgatctcttctttcttctccggttccatagcaagtgtttcaaacctt |
2860787 |
T |
|
| Q |
805 |
gcagggtgctcaaaagttgtgcgactccac |
834 |
Q |
| |
|
|||||||| ||||| ||||| |||||||| |
|
|
| T |
2860788 |
gcagggtgtgcaaaatttgtgtgactccac |
2860817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 505 - 834
Target Start/End: Original strand, 2865867 - 2866196
Alignment:
| Q |
505 |
gaacaatcaatatcgtcaataactataatcgatttacctgatgtctcaatcaaaagtcttttcaactcatagttatccttgacaattgttaattcaagat |
604 |
Q |
| |
|
|||||||||||||| |||||||| |||| ||||| | || ||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||| |
|
|
| T |
2865867 |
gaacaatcaatatcttcaataacgataactgatttgctcgacgtctcaatcaaaagtgttttcaactcattgttatccttgacagttgttaattcaagat |
2865966 |
T |
|
| Q |
605 |
cataaacgtcatagttcatgaaattcgcaatagcagatatcatggtagattttccggttcctggtggaccataaactagataaccacgtttccacgcctt |
704 |
Q |
| |
|
|||| || || |||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||| | ||||||||| |||||||| ||||| |
|
|
| T |
2865967 |
catatacatcgtagttcatgaaatttgcaatagcagatatcatggtagatttcccagttcctggtggaccatagagtagataaccgcgtttccaagcctt |
2866066 |
T |
|
| Q |
705 |
tccaactttagcataatacactttcccattcttgaatttaacaagatcgtttatgatctattccttcttctccggttccatagcaagtgtttcaaacctt |
804 |
Q |
| |
|
||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
2866067 |
tccaactttagcataatactctttccctttcttgaatttaacaagatcgtttatgatctcttctttcttctccggttccatagcaagtgtttcaaacctt |
2866166 |
T |
|
| Q |
805 |
gcagggtgctcaaaagttgtgcgactccac |
834 |
Q |
| |
|
||||||||| ||||| ||||| |||||||| |
|
|
| T |
2866167 |
gcagggtgcgcaaaatttgtgtgactccac |
2866196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 453 - 834
Target Start/End: Original strand, 2885005 - 2885386
Alignment:
| Q |
453 |
atcattatgacctttctccttgttcttcattgtttggccagtgaaatctagggaacaatcaatatcgtcaataactataatcgatttacctgatgtctca |
552 |
Q |
| |
|
|||| ||||| |||||||||| |||||| | |||| ||||| | || || |||||||||||||| |||||||| |||| ||||| | ||| |||||| |
|
|
| T |
2885005 |
atcagtatgatctttctcctttttcttcttcctttgaccagtaagctcgagagaacaatcaatatcttcaataacgataactgatttgcttgacgtctca |
2885104 |
T |
|
| Q |
553 |
atcaaaagtcttttcaactcatagttatccttgacaattgttaattcaagatcataaacgtcatagttcatgaaattcgcaatagcagatatcatggtag |
652 |
Q |
| |
|
||||||||| |||||||||||| ||||||||||||| | |||||||| |||||||| || || |||||||||||||| |||||||| ||||||||||||| |
|
|
| T |
2885105 |
atcaaaagtgttttcaactcattgttatccttgacagtggttaattctagatcatatacatcgtagttcatgaaatttgcaatagccgatatcatggtag |
2885204 |
T |
|
| Q |
653 |
attttccggttcctggtggaccataaactagataaccacgtttccacgcctttccaactttagcataatacactttcccattcttgaatttaacaagatc |
752 |
Q |
| |
|
|||| || ||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||| |
|
|
| T |
2885205 |
atttcccagttcctggtggaccataaagtagataaccccgtttccaagcctttccaactttagcataatactctttccctttcttgaatttaacaagatc |
2885304 |
T |
|
| Q |
753 |
gtttatgatctattccttcttctccggttccatagcaagtgtttcaaaccttgcagggtgctcaaaagttgtgcgactccac |
834 |
Q |
| |
|
||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||| |
|
|
| T |
2885305 |
gtttatgatctcttctttcttctccggttccatagcaagtgtttcaaaccttgcagggtgtgcaaaatttgtgtgactccac |
2885386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 27 - 390
Target Start/End: Complemental strand, 14578622 - 14578259
Alignment:
| Q |
27 |
cctttttctttgaaatctcaagagattgaatcaaattcttcaagcaagtctcaacatcttcaatgatcgtctttggcatcaaattctcagcaacatcagc |
126 |
Q |
| |
|
|||||||||||| | |||||||||||||||||||||||||||||||||| |||| ||||||| || | |||||||||||||| ||||||||||| || |
|
|
| T |
14578622 |
cctttttctttgcattctcaagagattgaatcaaattcttcaagcaagtttcaagatcttcagcaattgattttggcatcaaattttcagcaacatctgc |
14578523 |
T |
|
| Q |
127 |
cggtgtcatattagtctctcccaacaacttttcaataattggaaacaaatcatcatgcgactcaacatctaagtagttctttgcaagcatcttgaacact |
226 |
Q |
| |
|
||||| |||||||||||||| | |||||||||||||||||||||||| ||||||| ||||||||||| | || ||||||||||||| ||||| || |
|
|
| T |
14578522 |
aggtgttatattagtctctcctattaacttttcaataattggaaacaaaccatcatgagactcaacatcccaataattctttgcaagcactttgaatgct |
14578423 |
T |
|
| Q |
227 |
tgatagctacaataggacatttcaatgtgcatatccatccttcccctccttataagagcaggatcaagtttgtccacaaaattagttgtgaaaattatga |
326 |
Q |
| |
|
| |||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||| |||||||| || |||||||||||||||| |
|
|
| T |
14578422 |
tcatagctacaatatgacatttcaatatgcatatccatccttcccctcctaataagagcatgatcaagtttatccacaaagttggttgtgaaaattatga |
14578323 |
T |
|
| Q |
327 |
tcctttctcctccacatgttgaccaaattccatcaataaaattcaacaaacccgaatgagttac |
390 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| ||||||||||||||||| ||| ||||||| |
|
|
| T |
14578322 |
tcctttctcctccacatgccgaccaaattccatcgataaaattcaacaaaccagaaagagttac |
14578259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 177; E-Value: 7e-95
Query Start/End: Original strand, 485 - 837
Target Start/End: Original strand, 2833159 - 2833511
Alignment:
| Q |
485 |
tttggccagtgaaatctagggaacaatcaatatcgtcaataactataatcgatttacctgatgtctcaatcaaaagtcttttcaactcatagttatcctt |
584 |
Q |
| |
|
|||| ||||||| ||| || |||||||||||||| || ||||||||||||||||||| ||| || |||||||||||||| |||||||||| ||||||||| |
|
|
| T |
2833159 |
tttgcccagtgagatcgagagaacaatcaatatcttcgataactataatcgatttacttgacgtttcaatcaaaagtctcttcaactcattgttatcctt |
2833258 |
T |
|
| Q |
585 |
gacaattgttaattcaagatcataaacgtcatagttcatgaaattcgcaatagcagatatcatggtagattttccggttcctggtggaccataaactaga |
684 |
Q |
| |
|
||| ||||||||||||||||||| || |||||||||||| |||| || ||||| |||||||| ||||||||||| |||||||| |||||||||| |||| |
|
|
| T |
2833259 |
aacagttgttaattcaagatcatacacatcatagttcatgtaatttgctatagctgatatcatagtagattttccagttcctggaggaccataaagtaga |
2833358 |
T |
|
| Q |
685 |
taaccacgtttccacgcctttccaactttagcataatacactttcccattcttgaatttaacaagatcgtttatgatctattccttcttctccggttcca |
784 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||| |||| || |||||||| |||| |||||| |||| |||| || ||||| || ||||||| |
|
|
| T |
2833359 |
taaccacgtttccaagcctttccaactttagcataatactctttacctttcttgaacttaagaagatcatttaaaatctcttgtttcttttctggttcca |
2833458 |
T |
|
| Q |
785 |
tagcaagtgtttcaaaccttgcagggtgctcaaaagttgtgcgactccacttt |
837 |
Q |
| |
|
|||| || ||| |||| |||||||| ||||||||||||||| || |||||||| |
|
|
| T |
2833459 |
tagctagggttccaaatcttgcaggatgctcaaaagttgtgtgattccacttt |
2833511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 175; E-Value: 1e-93
Query Start/End: Original strand, 505 - 985
Target Start/End: Complemental strand, 14578179 - 14577704
Alignment:
| Q |
505 |
gaacaatcaatatcgtcaataactataatcgatttacctgatgtctcaatcaaaagtcttttcaactcatagttatccttgacaattgttaattcaagat |
604 |
Q |
| |
|
|||||||||||||| ||||| |||||||| ||||| | ||| ||| |||||||||||||||||||||||| ||||||||||| | ||||||||||||||| |
|
|
| T |
14578179 |
gaacaatcaatatcctcaatcactataattgatttgcttgacgtcgcaatcaaaagtcttttcaactcattgttatccttgatagttgttaattcaagat |
14578080 |
T |
|
| Q |
605 |
cataaacgtcatagttcatgaaattcgcaatagcagatatcatggtagattttccggttcctggtggaccataaactagataaccacgtttccacgcctt |
704 |
Q |
| |
|
|||||||||| |||||||| ||||| |||||||| ||||||||||||||||||||||||||||| ||||| ||| || |||||| |||||||| ||||| |
|
|
| T |
14578079 |
cataaacgtcgtagttcataaaatttgcaatagccgatatcatggtagattttccggttcctggaggaccgaaaagtaaataaccgcgtttccaagcctt |
14577980 |
T |
|
| Q |
705 |
tccaactttagcataatacactttcccattcttgaatttaacaagatcgtttatgatctattccttcttctccggttccatagcaagtgtttcaaacctt |
804 |
Q |
| |
|
||||||||||||||| ||| |||| || |||||| ||||||||||||| ||| |||| ||| ||||||| | ||||||||||||||||| |||||| |
|
|
| T |
14577979 |
tccaactttagcatagtactctttacctgccttgaacttaacaagatcgtctattatctcttctttcttctttgcatccatagcaagtgtttcgaacctt |
14577880 |
T |
|
| Q |
805 |
gcagggtgctcaaaagttgtgcgactccactttgatttgttacatcccagccaatcatcgcttggtttattagtgtaaagctttagctgcctcttcttct |
904 |
Q |
| |
|
|||||||| ||||| ||| ||| ||||||||| |||| || |||| |||||| ||||| || || || ||||| || || |||| ||| |||||| |
|
|
| T |
14577879 |
gcagggtgatcaaatgttatgcagctccactttcttttg-tatatcc--tccaatcgtcgctagggttgttcgtgtatagtttaagcttcctgttcttca |
14577783 |
T |
|
| Q |
905 |
ttgcaatagttttttcccttgttctaacacatgttggatgtacgaggtagtgatgagatcaccatgccttttgtcgaaggt |
985 |
Q |
| |
|
||||||||| |||| |||| || ||||||| ||| ||||| ||||||||||||||| ||| | |||||||| |||||| |
|
|
| T |
14577782 |
ttgcaatagctttt--ccttcatccaacacatattgtatgtaagaggtagtgatgagaccacggtaccttttgtggaaggt |
14577704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 130; E-Value: 8e-67
Query Start/End: Original strand, 465 - 758
Target Start/End: Complemental strand, 2829123 - 2828830
Alignment:
| Q |
465 |
tttctccttgttcttcattgtttggccagtgaaatctagggaacaatcaatatcgtcaataactataatcgatttacctgatgtctcaatcaaaagtctt |
564 |
Q |
| |
|
|||||||| |||||| || ||||||| |||| ||| || |||||||||||||| |||||||||||||||||||||| || ||||| |||||||||||| |
|
|
| T |
2829123 |
tttctcctctttcttctttctttggccggtgagatcaagagaacaatcaatatcttcaataactataatcgatttactcgacgtctcgatcaaaagtctt |
2829024 |
T |
|
| Q |
565 |
ttcaactcatagttatccttgacaattgttaattcaagatcataaacgtcatagttcatgaaattcgcaatagcagatatcatggtagattttccggttc |
664 |
Q |
| |
|
|||||||||| ||||| ||||| | ||||||| ||||||||||| || ||||| ||||||||||| |||||||| |||||||| ||||||||||| |||| |
|
|
| T |
2829023 |
ttcaactcattgttattcttgatagttgttaactcaagatcatacacatcataattcatgaaattagcaatagctgatatcatcgtagattttccagttc |
2828924 |
T |
|
| Q |
665 |
ctggtggaccataaactagataaccacgtttccacgcctttccaactttagcataatacactttcccattcttgaatttaacaagatcgtttat |
758 |
Q |
| |
|
| || |||||| ||| |||||||||||||||||| ||||| || ||||||| ||| ||| |||| || | ||||| ||||||||||| ||||| |
|
|
| T |
2828923 |
caggaggaccaaaaagtagataaccacgtttccaagccttcccgactttagtatagtactctttacctgttttgaacttaacaagatcatttat |
2828830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 921 - 1008
Target Start/End: Original strand, 2860890 - 2860978
Alignment:
| Q |
921 |
ccttgttctaacacatgttggatgtacgaggtagtgatgagatcaccatgccttttgtcg-aaggtagggttaggtatcttatcacatc |
1008 |
Q |
| |
|
|||||||| ||||||||||| ||||| |||| ||| |||||||| | ||||||||||| | ||| |||||||| |||||||| |||||| |
|
|
| T |
2860890 |
ccttgttccaacacatgttgtatgtaagaggaagtaatgagatcgcgatgccttttgtggaaagttagggttaagtatcttaccacatc |
2860978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 921 - 1008
Target Start/End: Original strand, 2866269 - 2866357
Alignment:
| Q |
921 |
ccttgttctaacacatgttggatgtacgaggtagtgatgagatcaccatgccttttgtcg-aaggtagggttaggtatcttatcacatc |
1008 |
Q |
| |
|
||||| || ||||||||||| ||||| |||| ||| |||||||| | ||||||||||| | ||| |||||||| |||||||| |||||| |
|
|
| T |
2866269 |
ccttggtccaacacatgttgtatgtaagaggaagtaatgagatcgcgatgccttttgtggaaagttagggttaagtatcttaccacatc |
2866357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 921 - 978
Target Start/End: Original strand, 2885459 - 2885516
Alignment:
| Q |
921 |
ccttgttctaacacatgttggatgtacgaggtagtgatgagatcaccatgccttttgt |
978 |
Q |
| |
|
|||||||| ||||||||||| ||||| |||| ||| |||||||| | ||||||||||| |
|
|
| T |
2885459 |
ccttgttccaacacatgttgtatgtaagaggaagtaatgagatcgcgatgccttttgt |
2885516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 67; Significance: 3e-29; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 592 - 722
Target Start/End: Complemental strand, 1800922 - 1800792
Alignment:
| Q |
592 |
gttaattcaagatcataaacgtcatagttcatgaaattcgcaatagcagatatcatggtagattttccggttcctggtggaccataaactagataaccac |
691 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||| ||||| | |||||| |||||||| || |||||||| |||||||||| || |||||| | |
|
|
| T |
1800922 |
gttaattcaagatcataaacatcatagttcatgaaattcgccatagcggctatcatagtagatttacctgttcctggaggaccataaagtaaataaccgc |
1800823 |
T |
|
| Q |
692 |
gtttccacgcctttccaactttagcataata |
722 |
Q |
| |
|
||||||| ||||| || | ||| |||||||| |
|
|
| T |
1800822 |
gtttccaagccttaccgatttttgcataata |
1800792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 42 - 378
Target Start/End: Complemental strand, 1801485 - 1801152
Alignment:
| Q |
42 |
tctcaagagattgaatcaaattcttcaagcaagtctcaacatcttcaatgatcgtctttggcatcaaattctcagcaacatcagccggtgtcatattagt |
141 |
Q |
| |
|
||||||| | |||||||||||||||||| | |||||| ||||||||| | | | ||| |||||||||||||||||||||||||| |||||||||||| | |
|
|
| T |
1801485 |
tctcaagtgcttgaatcaaattcttcaaactagtctcgacatcttcattcacagacttaggcatcaaattctcagcaacatcagcaggtgtcatattaat |
1801386 |
T |
|
| Q |
142 |
ctctcccaacaacttttcaataattggaaacaaatcatcatgcgactcaacatctaagtagttctttgcaagcatcttgaacacttgatagctacaatag |
241 |
Q |
| |
|
|| ||||||| | |||| |||||||| || | ||||||| ||| || || ||||| |||| | ||| || ||| | | | |||||| |
|
|
| T |
1801385 |
aacttccaacaaatcaccaatttcatcaaacaaataat---gtgactcaatatccaaataattcttaacaagaaccttaaaagcttcaaaacaacaataa |
1801289 |
T |
|
| Q |
242 |
gacatttcaatgtgcatatccatccttcccctccttataagagcaggatcaagtttgtccacaaaattagttgtgaaaattatgatcctttctcctccac |
341 |
Q |
| |
|
|| | |||| ||| ||||||||||||| |||| |||||||| ||||||||||| ||||||||||| || ||||||||||| ||||| || ||||||| |
|
|
| T |
1801288 |
gataactcaacgtgtttatccatccttcctgtcctaataagagctggatcaagtttctccacaaaattcgtcgtgaaaattataatcctctcccctccac |
1801189 |
T |
|
| Q |
342 |
atgttgaccaaattccatcaataaaattcaacaaacc |
378 |
Q |
| |
|
| | |||||||||||||||||||||||||| ||||| |
|
|
| T |
1801188 |
acgcggaccaaattccatcaataaaattcaataaacc |
1801152 |
T |
|
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Target: chr4 (Bit Score: 46; Significance: 1e-16; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 225 - 294
Target Start/End: Complemental strand, 6318586 - 6318517
Alignment:
| Q |
225 |
cttgatagctacaataggacatttcaatgtgcatatccatccttcccctccttataagagcaggatcaag |
294 |
Q |
| |
|
|||||||||||||||| |||||||| |||| | ||||||||||||||||||| || |||||||||||||| |
|
|
| T |
6318586 |
cttgatagctacaataagacatttctatgttcttatccatccttcccctcctgatgagagcaggatcaag |
6318517 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 260 - 372
Target Start/End: Complemental strand, 44396531 - 44396419
Alignment:
| Q |
260 |
tccatccttcccctccttataagagcaggatcaagtttgtccacaaaattagttgtgaaaattatgatcctttctcctccacatgttgaccaaattccat |
359 |
Q |
| |
|
||||| || |||||||||||||| ||||||||||| || |||||| |||| |||||||||| || | |||||| |||||||| | |||||| || |||| |
|
|
| T |
44396531 |
tccattctacccctccttataagtgcaggatcaagcttctccacataatttgttgtgaaaacaattaacctttcacctccacaagctgaccatataccat |
44396432 |
T |
|
| Q |
360 |
caataaaattcaa |
372 |
Q |
| |
|
|||| |||||||| |
|
|
| T |
44396431 |
caatgaaattcaa |
44396419 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 45; Significance: 4e-16; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 2178251 - 2178195
Alignment:
| Q |
97 |
ctttggcatcaaattctcagcaacatcagccggtgtcatattagtctctcccaacaa |
153 |
Q |
| |
|
||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||| |
|
|
| T |
2178251 |
ctttggcatcaaattttcagcaacatcagctggtgtcatattagtctctaccaacaa |
2178195 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 465 - 709
Target Start/End: Complemental strand, 6971379 - 6971135
Alignment:
| Q |
465 |
tttctccttgttcttcattgtttggccagtgaaatctagggaacaatcaatatcgtcaataactataatcgatttacctgatgtctcaatcaaaagtctt |
564 |
Q |
| |
|
||||||||| |||||| | |||| ||||| ||||| || |||||||||||||| ||||| || || || || |||| |||||||||||||||||| | |
|
|
| T |
6971379 |
tttctcctttttcttcctcctttgaccagtcaaatcaagtgaacaatcaatatcttcaatcacaattatagacttacttgatgtctcaatcaaaagcttc |
6971280 |
T |
|
| Q |
565 |
ttcaactcatagttatccttgacaattgttaattcaagatcataaacgtcatagttcatgaaattcgcaatagcagatatcatggtagattttccggttc |
664 |
Q |
| |
|
|||||||| ||||||||| ||| || |||||||||||||||| |||||| | ||||| || || |||| ||||| || || ||||| || | |
|
|
| T |
6971279 |
ctcaactcagtgttatccttaacagcagtcaattcaagatcataaagatcatagcctaacaaatttgccatggcagcaatcattgttgactttccagtcc |
6971180 |
T |
|
| Q |
665 |
ctggtggaccataaactagataaccacgtttccacgcctttccaa |
709 |
Q |
| |
|
|||| |||||||||| || |||||| | |||||| ||| |||||| |
|
|
| T |
6971179 |
ctggaggaccataaagtaaataacctcttttccaagcccttccaa |
6971135 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 6968956 - 6968904
Alignment:
| Q |
101 |
ggcatcaaattctcagcaacatcagccggtgtcatattagtctctcccaacaa |
153 |
Q |
| |
|
|||||||| || ||||||||||||||||| ||||| ||||||||| ||||||| |
|
|
| T |
6968956 |
ggcatcaagttttcagcaacatcagccggagtcatgttagtctcttccaacaa |
6968904 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 153
Target Start/End: Original strand, 51316115 - 51316167
Alignment:
| Q |
101 |
ggcatcaaattctcagcaacatcagccggtgtcatattagtctctcccaacaa |
153 |
Q |
| |
|
|||||||| || | |||||||||||| |||||||||||||||||| ||||||| |
|
|
| T |
51316115 |
ggcatcaagtttttagcaacatcagctggtgtcatattagtctcttccaacaa |
51316167 |
T |
|
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Target: chr5 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 650 - 713
Target Start/End: Complemental strand, 8052267 - 8052204
Alignment:
| Q |
650 |
tagattttccggttcctggtggaccataaactagataaccacgtttccacgcctttccaacttt |
713 |
Q |
| |
|
|||||||||| ||||||||||||||||| | || |||||||||||||| | ||| |||||||| |
|
|
| T |
8052267 |
tagattttcctgttcctggtggaccatacaataagtaaccacgtttccaaggcttaccaacttt |
8052204 |
T |
|
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