View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5700-Insertion-5 (Length: 705)
Name: NF5700-Insertion-5
Description: NF5700
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5700-Insertion-5 |
 | |
|
| [»] chr4 (13 HSPs) |
| |
|
Alignment Details
Target: chr4 (Bit Score: 678; Significance: 0; HSPs: 13)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 678; E-Value: 0
Query Start/End: Original strand, 8 - 705
Target Start/End: Complemental strand, 7616094 - 7615397
Alignment:
| Q |
8 |
gagaatacttgtgttgctgacatcctagaacctacctatgtacctccaattgttgattcatttttcgctttaaccggggttgaaagctacgaaggcacct |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7616094 |
gagaatacttgtgttgctgacatcctagaacctacctatgtacctccaattgttgattcatttttcgctttaaccggggttgaaagctacgaaggcacct |
7615995 |
T |
|
| Q |
108 |
caaaaccgttgttggcagttcaagtaacggagctagttgacggtatttttattggttgctcgttcaaccatgttgtcgttgacggagagtctgtgtggca |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7615994 |
caaaaccgttgttggcagttcaagtaacggagctagttgacggtatttttattggttgctcgttcaaccatgttgtcgttgacggagagtctgtgtggca |
7615895 |
T |
|
| Q |
208 |
tttcatcaattcatgggctgaaatatcacgtagttgttgtcatcatcaaatatctaaacccccaacactagagcgttggtttccaaatggtgttcaacag |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7615894 |
tttcatcaattcatgggctgaaatatcacgtagttgttgtcatcatcaaatatctaaacccccaacactagagcgttggtttccaaatggtgttcaacag |
7615795 |
T |
|
| Q |
308 |
cccatacgatttcctttcgtttacggtgatgaattgagtttttcgtcgtctaatgaggaaaaactttgcttatcaaataggatatttcatttcacaaaag |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
7615794 |
cccatacgatttcctttcgtttacggtgatgaattgagtttttcgtcgtctaatgaggaaaaactttgtttatcaaataggatatttcatttcacaaaag |
7615695 |
T |
|
| Q |
408 |
agaaaattgtacaactaaaatcgaaaatcaatgatgagattggtaccatcaaaatatcttctctacaagcgcttttaactcacctttggtgctctgtgat |
507 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
7615694 |
agaaaattgtacaactaaaatcgaaaatcaatgatgagattggtaccatcaaaatatcttctctacaagtgcttttaactcacctttggtgctctgtgat |
7615595 |
T |
|
| Q |
508 |
gcgttccataaaatttgacccacaagaagaagtatttaatatagttgtgataggagttcgaccaaggttagttccaccgttaccagaagattattttgga |
607 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |
|
|
| T |
7615594 |
gcgttccataaaatttgacccacaagaagaagtatttaatatagttgtgataggagttcgaccaaggttagttccaccattaccagaatattattttgga |
7615495 |
T |
|
| Q |
608 |
aatgcacttataagttgtatggttaaaatgaaagttggggagttgttggaagaaggtggactttgtaaaggtgcttgtgagatgaacaagttaattgt |
705 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7615494 |
aatgcacttataagttgtatggttaaaatgaaagttggggagttggtggaagaaggtggactttgtaaaggtgcttgtgagatgaacaagttaattgt |
7615397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 366; E-Value: 0
Query Start/End: Original strand, 6 - 704
Target Start/End: Complemental strand, 7607100 - 7606384
Alignment:
| Q |
6 |
cagagaatacttgtgttgctgacatcctagaacctacctatgtacctccaattgttgattcatttttcgctttaaccggggttgaaagctacgaaggcac |
105 |
Q |
| |
|
||||||||| | |||||||||||||||| ||||| ||| ||||||| |||||| ||||||||||| || || | ||| | | ||| ||| |||||||| |
|
|
| T |
7607100 |
cagagaatattcgtgttgctgacatcctggaaccggtctacgtacctctaattgtcgattcattttttgccttcatcggagataaaaactatgaaggcac |
7607001 |
T |
|
| Q |
106 |
ctcaaaaccgttgttggcagttcaagtaacggagctagttgacggtatttttattggttgctcgttcaaccatgttgtcgttgacggagagtctgtgtgg |
205 |
Q |
| |
|
|||||||| |||||||| |||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||| |||||| |
|
|
| T |
7607000 |
gtcaaaaccattgttggctgttcaaataacggagctagttgacggtattttcattggttgctccttcaaccatgttgtcgttgacggaaagtccgtgtgg |
7606901 |
T |
|
| Q |
206 |
catttcatcaattcatgggctgaaatatcacgtagttgttgtcatcatcaaatatctaaacccccaacactagagcgttggtttccaaatggtgttcaac |
305 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||| | |||||||||| |||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
7606900 |
catttcatcaattcatgggctgaaatatcacgcggttgttgtggtgatcaaatatccaaacccccaacactagagcgttggtttccaaatggtattcaac |
7606801 |
T |
|
| Q |
306 |
agcccatacgatttcctttcgttt------------------acggtgatgaattgagtttttcgtcgtctaatgaggaaaaactttgcttatcaaatag |
387 |
Q |
| |
|
|||||||||||||||||| | || ||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||| |
|
|
| T |
7606800 |
ttcccatacgatttcctttcactacggagcaacaaaataatcactgtgatgagttgagtttttcatcgtctaatgaggaaaaactttgtttatcaaatag |
7606701 |
T |
|
| Q |
388 |
gatatttcatttcacaaaagagaaaattgtacaactaaaatcgaaaatcaatgatgagattggtaccatcaaaatatcttctctacaagcgcttttaact |
487 |
Q |
| |
|
| |||||||||||||||| |||||||| ||||||| ||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
7606700 |
gttatttcatttcacaaaggagaaaatcatacaactgaaatcgaaaatcaatgaagaggttggtaccatcaaaataacttctctacaagcgcttttaact |
7606601 |
T |
|
| Q |
488 |
cacctttggtgctctgtgatgcgttccataaaatttgacccacaagaagaagtatttaatatagttgtgataggagttcgaccaaggttagttccaccgt |
587 |
Q |
| |
|
||||||||||||||||| | ||||||| | ||||||||| |||||||||||||| |||| |||| |||||||||||| |||||||||| |||||||| | |
|
|
| T |
7606600 |
cacctttggtgctctgtcgtccgttccaaacaatttgacctacaagaagaagtatataatctagtcgtgataggagttggaccaaggtttgttccaccat |
7606501 |
T |
|
| Q |
588 |
taccagaagattattttggaaatgcacttataagttgtatggttaaaatgaaagttggggagttgttggaagaaggtggactttgtaaaggtgcttgtga |
687 |
Q |
| |
|
|||||||||||||||||||||| | ||||||||||||| || |||||||||||||| ||||||||||| ||||||||||| | ||||||||||||||| |
|
|
| T |
7606500 |
taccagaagattattttggaaactcgattataagttgtatagtcaaaatgaaagttggtgagttgttggacgaaggtggactatataaaggtgcttgtga |
7606401 |
T |
|
| Q |
688 |
gatgaacaagttaattg |
704 |
Q |
| |
|
||||||||| ||||||| |
|
|
| T |
7606400 |
gatgaacaaattaattg |
7606384 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 341 - 704
Target Start/End: Complemental strand, 7637578 - 7637215
Alignment:
| Q |
341 |
ttgagtttttcgtcgtctaatgaggaaaaactttgcttatcaaataggatatttcatttcacaaaagagaaaattgtacaactaaaatcgaaaatcaatg |
440 |
Q |
| |
|
||||||||||| |||| ||||||||||||| ||| |||||||||||| |||||||||||||||| |||||||| ||||| | |||||||||||||| | |
|
|
| T |
7637578 |
ttgagtttttcatcgtttaatgaggaaaaatattgtttatcaaataggttatttcatttcacaaaggagaaaatcctacaattgaaatcgaaaatcaacg |
7637479 |
T |
|
| Q |
441 |
atgagattggtaccatcaaaatatcttctctacaagcgcttttaactcacctttggtgctctgtgatgcgttccataaaatttgacccacaagaagaagt |
540 |
Q |
| |
|
| ||||| || |||| ||||||||||||||||||||| |||||||||||| ||||||||| ||||| |||| || | |||||||||||||||||||||| |
|
|
| T |
7637478 |
aagagatcggcaccaccaaaatatcttctctacaagcacttttaactcacgtttggtgctatgtgacccgtttcaaacaatttgacccacaagaagaagt |
7637379 |
T |
|
| Q |
541 |
atttaatatagttgtgataggagttcgaccaaggttagttccaccgttaccagaagattattttggaaatgcacttataagttgtatggttaaaatgaaa |
640 |
Q |
| |
|
|||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7637378 |
atttaatagagtcgtgataggagttcgaccaaggttagttccaccgttaccagaagattattttggaaatgcacttataagttgtatggttaaaatgaaa |
7637279 |
T |
|
| Q |
641 |
gttggggagttgttggaagaaggtggactttgtaaaggtgcttgtgagatgaacaagttaattg |
704 |
Q |
| |
|
| |||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
7637278 |
gctggggaattgttggaggaaggtggactttgtaaaggtgctttggagatgaacaagttaattg |
7637215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 6 - 325
Target Start/End: Complemental strand, 7637931 - 7637612
Alignment:
| Q |
6 |
cagagaatacttgtgttgctgacatcctagaacctacctatgtacctccaattgttgattcatttttcgctttaaccggggttgaaagctacgaaggcac |
105 |
Q |
| |
|
||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||| || |||||| ||| || |||||| |||||||| |
|
|
| T |
7637931 |
cagagaatacttgtgttgcagacatcctagaacccacctacgtacctccaattgttgatttattatttgctttatccgaagtaagaagctatgaaggcac |
7637832 |
T |
|
| Q |
106 |
ctcaaaaccgttgttggcagttcaagtaacggagctagttgacggtatttttattggttgctcgttcaaccatgttgtcgttgacggagagtctgtgtgg |
205 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||| |||| |||||| |
|
|
| T |
7637831 |
atcaaaaccattgttggcagttcaagtaacggagctagttgacggtattttcattggttgctcatttaaccatgttgtcgttgacggaaagtccgtgtgg |
7637732 |
T |
|
| Q |
206 |
catttcatcaattcatgggctgaaatatcacgtagttgttgtcatcatcaaatatctaaacccccaacactagagcgttggtttccaaatggtgttcaac |
305 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7637731 |
catttcatcaattcctgggctgaaatctcacgtagttgttgtcatcatcaaatatctaaacccccaacactagagcgttggtttccaaatggtgttcaac |
7637632 |
T |
|
| Q |
306 |
agcccatacgatttcctttc |
325 |
Q |
| |
|
||| ||||||||||||||| |
|
|
| T |
7637631 |
ggcctatacgatttcctttc |
7637612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 349 - 704
Target Start/End: Complemental strand, 7629124 - 7628769
Alignment:
| Q |
349 |
ttcgtcgtctaatgaggaaaaactttgcttatcaaataggatatttcatttcacaaaagagaaaattgtacaactaaaatcgaaaatcaatgatgagatt |
448 |
Q |
| |
|
|||||| |||||||| ||||||||||| ||||||||||| |||| || || ||||| |||||||| || ||||| ||||| |||||||| | |||||| |
|
|
| T |
7629124 |
ttcgtcatctaatgatgaaaaactttgtttatcaaatagattattccactttacaaaggagaaaatcgtgcaactgaaatcaaaaatcaacaaagagatt |
7629025 |
T |
|
| Q |
449 |
ggtaccatcaaaatatcttctctacaagcgcttttaactcacctttggtgctctgtgatgcgttccataaaatttgacccacaagaagaagtatttaata |
548 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| ||||||| ||||||||| ||||| |||| || | |||||||||||||||||||||||||||||| |
|
|
| T |
7629024 |
ggtaacatcaaaatatcttctctacaagcgcttctaactcatgtttggtgctatgtgacccgtttcaaacaatttgacccacaagaagaagtatttaata |
7628925 |
T |
|
| Q |
549 |
tagttgtgataggagttcgaccaaggttagttccaccgttaccagaagattattttggaaatgcacttataagttgtatggttaaaatgaaagttgggga |
648 |
Q |
| |
|
||| | |||||||||| |||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |
|
|
| T |
7628924 |
gagtcgcgataggagttagaccaaggcttattccaccattaccagaagattattttggaaatgcacttataagttgtatggttaaaatgaaagctgagga |
7628825 |
T |
|
| Q |
649 |
gttgttggaagaaggtggactttgtaaaggtgcttgtgagatgaacaagttaattg |
704 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7628824 |
attgttggaggaaggtggactttgtaaaggtgcttgtgagatgaacaagttaattg |
7628769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 8 - 325
Target Start/End: Complemental strand, 7629483 - 7629166
Alignment:
| Q |
8 |
gagaatacttgtgttgctgacatcctagaacctacctatgtacctccaattgttgattcatttttcgctttaaccggggttgaaagctacgaaggcacct |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| ||||||| |||||| |||||| | || || || | || | | |||||||||||||||| | |
|
|
| T |
7629483 |
gagaatacttgtgttgctgacatcctagaaccggtctacgtacctcaaattgtcgattcactatttgcctttataggagataaaagctacgaaggcacgt |
7629384 |
T |
|
| Q |
108 |
caaaaccgttgttggcagttcaagtaacggagctagttgacggtatttttattggttgctcgttcaaccatgttgtcgttgacggagagtctgtgtggca |
207 |
Q |
| |
|
||||||| |||||||| ||||||||||||||||||||||||||| | |||||||||||| | |||||||||||||| ||||||||| |||| |||||||| |
|
|
| T |
7629383 |
caaaaccattgttggctgttcaagtaacggagctagttgacggtgtctttattggttgcacattcaaccatgttgttgttgacggaaagtccgtgtggca |
7629284 |
T |
|
| Q |
208 |
tttcatcaattcatgggctgaaatatcacgtagttgttgtcatcatcaaatatctaaacccccaacactagagcgttggtttccaaatggtgttcaacag |
307 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||| |||||| |
|
|
| T |
7629283 |
tttcatcaattcatgggctgaaatctcacgtagttgttgtcatcatcaaatatctaaacctccaacatctgaacgttggtttccaaatggtattcaactt |
7629184 |
T |
|
| Q |
308 |
cccatacgatttcctttc |
325 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
7629183 |
cccatacgatttcctttc |
7629166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 344 - 704
Target Start/End: Original strand, 7655748 - 7656108
Alignment:
| Q |
344 |
agtttttcgtcgtctaatgaggaaaaactttgcttatcaaataggatatttcatttcacaaaagagaaaattgtacaactaaaatcgaaaatcaatgatg |
443 |
Q |
| |
|
||||||||||| ||| |||| |||||||| | ||||| | ||||||||||| || ||||| ||||||| | ||||| ||||||||| |||||| | |
|
|
| T |
7655748 |
agtttttcgtcttctgatgacgaaaaactctttctatcagagaggatatttcactttacaaagaagaaaatcatgcaactgaaatcgaaagtcaatgcag |
7655847 |
T |
|
| Q |
444 |
agattggtaccatcaaaatatcttctctacaagcgcttttaactcacctttggtgctctgtgatgcgttccataaaatttgacccacaagaagaagtatt |
543 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||||||||||||||| |||||||| || ||||| ||||||| | | |||| ||||||||||| | | |
|
|
| T |
7655848 |
agattgataccaaaaaaatatcttctctacaagcgcttttaactcatctttggtgttcagtgattcgttccaaacatcttgatccacaagaagatgcgct |
7655947 |
T |
|
| Q |
544 |
taatatagttgtgataggagttcgaccaaggttagttccaccgttaccagaagattattttggaaatgcacttataagttgtatggttaaaatgaaagtt |
643 |
Q |
| |
|
||||| | | ||||||||| ||||||| | |||||||| || || ||||||||||||||||| || ||||| |||| | |||||||||||||| |
|
|
| T |
7655948 |
taatacgttcataataggagttagaccaagacttgttccaccattgccggaagattattttggaaacgcgattataggttgcgggtttaaaatgaaagtt |
7656047 |
T |
|
| Q |
644 |
ggggagttgttggaagaaggtggactttgtaaaggtgcttgtgagatgaacaagttaattg |
704 |
Q |
| |
|
|||||||||||||| |||||||| || |||||||||||| |||||| |||||||||| |
|
|
| T |
7656048 |
ggggagttgttggaggaaggtgggattggtaaaggtgctttgttgatgaataagttaattg |
7656108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 12 - 324
Target Start/End: Original strand, 7655401 - 7655710
Alignment:
| Q |
12 |
atacttgtgttgctgacatcctagaacctacctatgtacctccaattgttgattcatttttcgctttaaccggggttgaaagctacgaaggcacctcaaa |
111 |
Q |
| |
|
||||||||||||||||||||||| |||| || ||||| ||| | ||||| ||||||||| |||| | | ||| || |||||||||||| ||||| |
|
|
| T |
7655401 |
atacttgtgttgctgacatcctaaaacccacatatgttccttcggttgttcgttcattttttcctttcaatgacgttagaaactacgaaggcacatcaaa |
7655500 |
T |
|
| Q |
112 |
accgttgttggcagttcaagtaacggagctagttgacggtatttttattggttgctcgttcaaccatgttgtcgttgacggagagtctgtgtggcatttc |
211 |
Q |
| |
|
||| |||||||| |||||||| ||||||||||||||||| || || ||||| | ||||||||||| || | ||||||| |||| |||||||||| |
|
|
| T |
7655501 |
accattgttggctgttcaagtcacggagctagttgacggcatcttcattggctttaatttcaaccatgtcgtagctgacggacagtccacgtggcatttc |
7655600 |
T |
|
| Q |
212 |
atcaattcatgggctgaaatatcacgtagttgttgtcatcatcaaatatctaaacccccaacactagagcgttggtttccaaatggtgttcaacagccca |
311 |
Q |
| |
|
|||||||| ||||||||||| |||||| |||| |||||||||||||||||| ||||||| || |||||||||||||||||||| |||||| || | |
|
|
| T |
7655601 |
atcaattcgtgggctgaaatgtcacgtggttg---tcatcatcaaatatctaactccccaacgctggagcgttggtttccaaatggaattcaacgaccta |
7655697 |
T |
|
| Q |
312 |
tacgatttccttt |
324 |
Q |
| |
|
||||||||||||| |
|
|
| T |
7655698 |
tacgatttccttt |
7655710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 593 - 704
Target Start/End: Complemental strand, 7633650 - 7633538
Alignment:
| Q |
593 |
gaagattattttggaaatgcacttataagttgtatggttaaaatgaaagttggggagttgttggaagaaggtggactttg-taaaggtgcttgtgagatg |
691 |
Q |
| |
|
||||||| ||||||||||||| ||||| |||||| ||||||||| |||||||||||||| ||||| || ||||| | ||| |||||||| | |||||| |
|
|
| T |
7633650 |
gaagattgttttggaaatgcagttatatgttgtaaggttaaaattaaagttggggagttattggaggagggtgggcattgcaaaaggtgcatcggagatg |
7633551 |
T |
|
| Q |
692 |
aacaagttaattg |
704 |
Q |
| |
|
||||||||||||| |
|
|
| T |
7633550 |
aacaagttaattg |
7633538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 94 - 231
Target Start/End: Complemental strand, 39098443 - 39098306
Alignment:
| Q |
94 |
ctacgaaggcacctcaaaaccgttgttggcagttcaagtaacggagctagttgacggtatttttattggttgctcgttcaaccatgttgtcgttgacgga |
193 |
Q |
| |
|
|||||||||||| |||||||| ||| | ||||||||||| || ||||| ||||| |||||||| ||||| | ||| |||| |||||||| || || || |
|
|
| T |
39098443 |
ctacgaaggcacatcaaaaccattgcttgcagttcaagttactgagcttgttgatggtattttcattggcttctcaatcaatcatgttgttgtcgatggt |
39098344 |
T |
|
| Q |
194 |
gagtctgtgtggcatttcatcaattcatgggctgaaat |
231 |
Q |
| |
|
|||| | ||||||||||||||||||||| ||||||| |
|
|
| T |
39098343 |
aagtcgttttggcatttcatcaattcatggtctgaaat |
39098306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 443 - 538
Target Start/End: Complemental strand, 7633759 - 7633664
Alignment:
| Q |
443 |
gagattggtaccatcaaaatatcttctctacaagcgcttttaactcacctttggtgctctgtgatgcgttccataaaatttgacccacaagaagaa |
538 |
Q |
| |
|
|||||||||||| ||||||||| || ||| | ||||||||| |||||||||||||| ||||| ||||||| | || ||||| ||||||||||| |
|
|
| T |
7633759 |
gagattggtaccgtcaaaatatatttcctatatgcgcttttagctcacctttggtgccatgtgacccgttccaaacaacttgacgcacaagaagaa |
7633664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 457 - 540
Target Start/End: Complemental strand, 8999337 - 8999255
Alignment:
| Q |
457 |
caaaatatcttctctacaagcgcttttaactcacctttggtgctctgtgatgcgttccataaaatttgacccacaagaagaagt |
540 |
Q |
| |
|
|||||||||||| || ||||||||| | ||||||||||| |||||||||| ||||| | | || |||||| |||||||||||| |
|
|
| T |
8999337 |
caaaatatcttccctgcaagcgcttaca-ctcacctttggcgctctgtgatccgttcaaaacaacttgacctacaagaagaagt |
8999255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 457 - 496
Target Start/End: Complemental strand, 39098086 - 39098047
Alignment:
| Q |
457 |
caaaatatcttctctacaagcgcttttaactcacctttgg |
496 |
Q |
| |
|
||||||||||||| ||||||| |||||||||||||||||| |
|
|
| T |
39098086 |
caaaatatcttctttacaagcacttttaactcacctttgg |
39098047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 390; Significance: 0; HSPs: 8)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 390; E-Value: 0
Query Start/End: Original strand, 6 - 704
Target Start/End: Original strand, 8935356 - 8936072
Alignment:
| Q |
6 |
cagagaatacttgtgttgctgacatcctagaacctacctatgtacctccaattgttgattcatttttcgctttaaccggggttgaaagctacgaaggcac |
105 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| ||||| ||||| |||||||||||||||||||| |||||||||| ||| ||||||||||||||| |
|
|
| T |
8935356 |
cagagaatacttgtgttgctgacattctagaacccacctacgtaccaccaattgttgattcattttttgctttaaccgatgttagaagctacgaaggcac |
8935455 |
T |
|
| Q |
106 |
ctcaaaaccgttgttggcagttcaagtaacggagctagttgacggtatttttattggttgctcgttcaaccatgttgtcgttgacggagagtctgtgtgg |
205 |
Q |
| |
|
|||||||| |||||||||||||||||||| ||| || ||||||||||||| ||||||||||| || ||||| | |||| |||||||| ||||||||||| |
|
|
| T |
8935456 |
atcaaaaccattgttggcagttcaagtaactgagttaattgacggtattttcattggttgctcatttaaccacgctgtcattgacggaaagtctgtgtgg |
8935555 |
T |
|
| Q |
206 |
catttcatcaattcatgggctgaaatatcacgtagttgttgtcatcatcaaatatctaaacccccaacactagagcgttggtttccaaatggtgttcaac |
305 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
8935556 |
catttcatcaattcttgggctgaaatctcacgtagttgttgtcatcatcaaatatctaaacctccaacactagaacgttggtttccggatggtgttcaac |
8935655 |
T |
|
| Q |
306 |
agcccatacgatttcctttcgttt------------------acggtgatgaattgagtttttcgtcgtctaatgaggaaaaactttgcttatcaaatag |
387 |
Q |
| |
|
||| ||||||||||||||| || || ||||| |||||||||| ||||| |||| ||||||||||| || |||||||| |
|
|
| T |
8935656 |
ggccaatacgatttcctttcactttggagcaacaaaagaatcactctgatgggttgagttttttgtcgttagatgatgaaaaactttgtttctcaaatag |
8935755 |
T |
|
| Q |
388 |
gatatttcatttcacaaaagagaaaattgtacaactaaaatcgaaaatcaatgatgagattggtaccatcaaaatatcttctctacaagcgcttttaact |
487 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| || |||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
8935756 |
aatatttcatttcacaaaagagaaaatcgtacagctgaaattaaaaatcaatgaagagattggtaccatcaaaatatcttctctacaagcgcctttaact |
8935855 |
T |
|
| Q |
488 |
cacctttggtgctctgtgatgcgttccataaaatttgacccacaagaagaagtatttaatatagttgtgataggagttcgaccaaggttagttccaccgt |
587 |
Q |
| |
|
||||||||||||| ||||||| |||||| |||| ||||||||||||||||||| |||||| | | |||||||||||| ||||||||||||||||||| | |
|
|
| T |
8935856 |
cacctttggtgctgtgtgatgtgttccaaaaaaattgacccacaagaagaagtggttaatagaatcgtgataggagttggaccaaggttagttccaccat |
8935955 |
T |
|
| Q |
588 |
taccagaagattattttggaaatgcacttataagttgtatggttaaaatgaaagttggggagttgttggaagaaggtggactttgtaaaggtgcttgtga |
687 |
Q |
| |
|
|||||||| ||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||| | ||||||||||||||||||||||||||||| |
|
|
| T |
8935956 |
taccagaatattattttggaaatgcagttataagttgtatggttaaaatgacagctggggagttgttgaaggaaggtggactttgtaaaggtgcttgtga |
8936055 |
T |
|
| Q |
688 |
gatgaacaagttaattg |
704 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
8936056 |
gatgaacaagttaattg |
8936072 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 110 - 669
Target Start/End: Original strand, 8910525 - 8911098
Alignment:
| Q |
110 |
aaaccgttgttggcagttcaagtaacggagctagttgacggtatttttattggttgctcgttcaaccatgttgtcgttgacggagagtctgtgtggcatt |
209 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||| |||| |||||||||| |
|
|
| T |
8910525 |
aaaccattgttggcagttcaagtaacggagctagttgacggtattttcattggttgctcatttaaccatgttgtcgttgacggaaagtccgtgtggcatt |
8910624 |
T |
|
| Q |
210 |
tcatcaattcatgggctgaaatatcacgtagttgttgtcatcatcaaatatctaaacccccaacactagagcgttggtttccaaatggtgttcaacagcc |
309 |
Q |
| |
|
|||| ||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |
|
|
| T |
8910625 |
tcattaattcctgggctgaaatctcacgtagttgttgtcattatcaaatatctaaacccccaacactagagcgttggtttccaaa----gttcaacggcc |
8910720 |
T |
|
| Q |
310 |
catacgatttcctttcgttt------------------acggtgatgaattgagtttttcgtcgtctaatgaggaaaaactttgcttatcaaataggata |
391 |
Q |
| |
|
||||||||||||||| || || ||||| ||||||||||| ||| |||||||||||||| ||| |||||||||||| || |
|
|
| T |
8910721 |
tatacgatttcctttcactttggagcaacaaaaggatcactctgatgggttgagtttttcatcgcttaatgaggaaaaacattgtttatcaaataggtta |
8910820 |
T |
|
| Q |
392 |
tttcatttcacaaaagagaaaattgtacaactaaaatcgaaaatcaatgatgagattggtaccatcaaaatatcttctctacaagcgcttttaactcacc |
491 |
Q |
| |
|
|||||||||||||| |||||||| ||||| | |||||||||||||| || ||||| || |||| ||||||||||||||||||||| |||||||||||| |
|
|
| T |
8910821 |
tttcatttcacaaaggagaaaatcctacaattgaaatcgaaaatcaacgaagagatcggcaccaccaaaatatcttctctacaagcacttttaactcaca |
8910920 |
T |
|
| Q |
492 |
tttggtgctctgtgatgcgttccataaaatttgacccacaagaagaagtatttaatatagttgtgataggagttcgaccaaggttagttccaccgttacc |
591 |
Q |
| |
|
| |||| || |||||| ||| || | ||||||| |||||||| ||||||||||||| ||| ||||||||||| ||||||||||||||||||| ||||| |
|
|
| T |
8910921 |
tctggtcctatgtgatatgtttcaaacaatttgatccacaagatgaagtatttaatagagtcatgataggagttggaccaaggttagttccaccattacc |
8911020 |
T |
|
| Q |
592 |
agaagattattttggaaatgcacttataagttgtatggttaaaatgaaagttggggagttgttggaagaaggtggact |
669 |
Q |
| |
|
|||| ||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||| ||||||||||| |
|
|
| T |
8911021 |
agaatattattttggaaatgcaattgtaagttgtatggttaaaatgaaagttggggagctgttggaggaaggtggact |
8911098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 6 - 266
Target Start/End: Original strand, 8934415 - 8934675
Alignment:
| Q |
6 |
cagagaatacttgtgttgctgacatcctagaacctacctatgtacctccaattgttgattcatttttcgctttaaccggggttgaaagctacgaaggcac |
105 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||| |
|
|
| T |
8934415 |
cagagaatacttgtgttgctgacattctagaacccacctacgtacctccaattgttgattcattttttgctttaaccggtgttagaagctacgaaggcac |
8934514 |
T |
|
| Q |
106 |
ctcaaaaccgttgttggcagttcaagtaacggagctagttgacggtatttttattggttgctcgttcaaccatgttgtcgttgacggagagtctgtgtgg |
205 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| || ||||||||||||| ||||||||||| || ||||| | |||| |||||||| ||||||||||| |
|
|
| T |
8934515 |
atcaaaaccattgttggcagttcaagtaacggagttaattgacggtattttcattggttgctcatttaaccacgctgtcattgacggaaagtctgtgtgg |
8934614 |
T |
|
| Q |
206 |
catttcatcaattcatgggctgaaatatcacgtagttgttgtcatcatcaaatatctaaac |
266 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |
|
|
| T |
8934615 |
catttcatcaattcatgggctgaaatctcacgtagttgttgtcatcatcaaatatttaaac |
8934675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 6 - 257
Target Start/End: Original strand, 8929960 - 8930211
Alignment:
| Q |
6 |
cagagaatacttgtgttgctgacatcctagaacctacctatgtacctccaattgttgattcatttttcgctttaaccggggttgaaagctacgaaggcac |
105 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| ||||||||||| ||| ||||||||||| ||| |
|
|
| T |
8929960 |
cagagaatacttgtgttgctgacattctagaacccacctacgtacctccaattgttgattcattttttgctttaaccggtgttagaagctacgaagtcac |
8930059 |
T |
|
| Q |
106 |
ctcaaaaccgttgttggcagttcaagtaacggagctagttgacggtatttttattggttgctcgttcaaccatgttgtcgttgacggagagtctgtgtgg |
205 |
Q |
| |
|
|||||||| ||||||||| |||||||||| ||| || ||||||||||||| ||||||||||| || ||||| | |||| |||| ||| |||||||||| |
|
|
| T |
8930060 |
atcaaaaccattgttggcatttcaagtaactgagttaattgacggtattttcattggttgctcatttaaccacgctgtcattgatggaaagtctgtgtga |
8930159 |
T |
|
| Q |
206 |
catttcatcaattcatgggctgaaatatcacgtagttgttgtcatcatcaaa |
257 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
8930160 |
catttcatcaattcatgggctgaaatctcacgtagttgttgtcatcatcaaa |
8930211 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 570 - 704
Target Start/End: Original strand, 8938714 - 8938848
Alignment:
| Q |
570 |
caaggttagttccaccgttaccagaagattattttggaaatgcacttataagttgtatggttaaaatgaaagttggggagttgttggaagaaggtggact |
669 |
Q |
| |
|
||||||| |||||||| ||||||||||||||||||||||| | ||||||||||||| || |||||||||||||| ||||||||||| ||||||||||| |
|
|
| T |
8938714 |
caaggtttgttccaccattaccagaagattattttggaaactcgattataagttgtatagtcaaaatgaaagttggtgagttgttggacgaaggtggact |
8938813 |
T |
|
| Q |
670 |
ttgtaaaggtgcttgtgagatgaacaagttaattg |
704 |
Q |
| |
|
| |||||||||||||||||||||||||||||||| |
|
|
| T |
8938814 |
atataaaggtgcttgtgagatgaacaagttaattg |
8938848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 593 - 704
Target Start/End: Original strand, 8918977 - 8919089
Alignment:
| Q |
593 |
gaagattattttggaaatgcacttataagttgtatggttaaaatgaaagttggggagttgttggaagaaggtggactttg-taaaggtgcttgtgagatg |
691 |
Q |
| |
|
||||||| ||||||||||||| ||||| ||||| ||||||||| |||||||||||||| ||||| || ||||| | ||| |||||||| | |||||| |
|
|
| T |
8918977 |
gaagattgttttggaaatgcagttatatgttgtgaggttaaaattaaagttggggagttattggaggagggtgggcattgcaaaaggtgcatcggagatg |
8919076 |
T |
|
| Q |
692 |
aacaagttaattg |
704 |
Q |
| |
|
||||| ||||||| |
|
|
| T |
8919077 |
aacaaattaattg |
8919089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 401 - 538
Target Start/End: Original strand, 8918826 - 8918963
Alignment:
| Q |
401 |
acaaaagagaaaattgtacaactaaaatcgaaaatcaatgatgagattggtaccatcaaaatatcttctctacaagcgcttttaactcacctttggtgct |
500 |
Q |
| |
|
||||| |||||||| ||||||| ||||| ||| |||| |||||||||||| ||||||||| || ||| | ||||||||| |||||||||||||| |
|
|
| T |
8918826 |
acaaaggagaaaatcttacaactgaaatcaaaagtcaacacagagattggtaccgtcaaaatatatttcctatatgcgcttttagctcacctttggtgcc |
8918925 |
T |
|
| Q |
501 |
ctgtgatgcgttccataaaatttgacccacaagaagaa |
538 |
Q |
| |
|
||||| ||||||| | || ||||| || |||||||| |
|
|
| T |
8918926 |
atgtgacccgttccaaacaacttgacgcataagaagaa |
8918963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 664 - 704
Target Start/End: Original strand, 8913524 - 8913564
Alignment:
| Q |
664 |
tggactttgtaaaggtgcttgtgagatgaacaagttaattg |
704 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
8913524 |
tggactttgtaaaggtgctttggagatgaacaagttaattg |
8913564 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 79; Significance: 1e-36; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 390 - 684
Target Start/End: Original strand, 40147022 - 40147316
Alignment:
| Q |
390 |
tatttcatttcacaaaagagaaaattgtacaactaaaatcgaaaatcaatgatgagattggtaccatcaaaatatcttctctacaagcgcttttaactca |
489 |
Q |
| |
|
|||| ||||||||||| |||||||| | ||||| |||| |||| ||| ||||||||||||| ||||||||| || || ||| | ||||| || || |
|
|
| T |
40147022 |
tattccatttcacaaaggagaaaatcgctcaactgaaattgaaagccaacatggagattggtaccaacaaaatatcatccctccaatcactttttacaca |
40147121 |
T |
|
| Q |
490 |
cctttggtgctctgtgatgcgttccataaaatttgacccacaagaagaagtatttaatatagttgtgataggagttcgaccaaggttagttccaccgtta |
589 |
Q |
| |
|
|||||| |||||||||| ||||||| | ||||||||||||| |||||||| | | |||| || | |||||||| | || ||||||| |||||||| || |
|
|
| T |
40147122 |
tctttggcgctctgtgatccgttccaaacaatttgacccacacgaagaagtttattatatggtcgcgataggagctagatcaaggtttgttccaccattg |
40147221 |
T |
|
| Q |
590 |
ccagaagattattttggaaatgcacttataagttgtatggttaaaatgaaagttggggagttgttggaagaaggtggactttgtaaaggtgcttg |
684 |
Q |
| |
|
|| |||||||||||||||||||| || | ||||| ||||| |||||||| || |||||||||||||| ||||| ||| ||||||||||||| |
|
|
| T |
40147222 |
cctgaagattattttggaaatgctgttgaagtttgtagggttacaatgaaagcgggagagttgttggaagatggtgggcttggtaaaggtgcttg |
40147316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 457 - 684
Target Start/End: Complemental strand, 8102856 - 8102629
Alignment:
| Q |
457 |
caaaatatcttctctacaagcgcttttaactcacctttggtgctctgtgatgcgttccataaaatttgacccacaagaagaagtatttaatatagttgtg |
556 |
Q |
| |
|
|||||||||||| || ||||| ||||| | |||||||||||||| ||||| |||||| |||| ||||||||||| | | || | ||| || | | |
|
|
| T |
8102856 |
caaaatatcttcccttcaagcactttttgcacacctttggtgctcagtgatccgttccgaccaattagacccacaagagaacgcatattttatggtcggg |
8102757 |
T |
|
| Q |
557 |
ataggagttcgaccaaggttagttccaccgttaccagaagattattttggaaatgcacttataagttgtatggttaaaatgaaagttggggagttgttgg |
656 |
Q |
| |
|
||||||||| ||| |||||| |||||||| || || |||||||||||||||||||| || || || ||||||| ||||||||||||||||||||||| |
|
|
| T |
8102756 |
ataggagttagacaaaggtttgttccaccattgccggaagattattttggaaatgctgttgtagcttctatggttgcaatgaaagttggggagttgttgg |
8102657 |
T |
|
| Q |
657 |
aagaaggtggactttgtaaaggtgcttg |
684 |
Q |
| |
|
||||||| || || ||||| ||||||| |
|
|
| T |
8102656 |
aagaaggcgggtttggtaaatgtgcttg |
8102629 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 41 - 324
Target Start/End: Original strand, 40146679 - 40146959
Alignment:
| Q |
41 |
acctatgtacctccaattgttgattcatttttcgctttaaccggggttgaaagctacgaaggcacctcaaaaccgttgttggcagttcaagtaacggagc |
140 |
Q |
| |
|
||||| || ||||| || || ||||||||||| | |||||| | ||| ||| ||||||||||| ||| |||| ||||| || || ||||| || ||| |
|
|
| T |
40146679 |
acctacgttcctcccatcgtcgattcattttttccattaaccagagttaaaaattacgaaggcacatcacaaccattgttagctgtgcaagtgacagagt |
40146778 |
T |
|
| Q |
141 |
tagttgacggtatttttattggttgctcgttcaaccatgttgtcgttgacggagagtctgtgtggcatttcatcaattcatgggctgaaatatcacgtag |
240 |
Q |
| |
|
|||||||||| | || ||||||| | || ||||||| || |||||||||||||| |||| |||||| ||||||||||| |||| || ||| | |
|
|
| T |
40146779 |
tagttgacggcttcttcattggttttacatttaaccatgcggttgttgacggagagtccacatggcttttcattaattcatgggcgaaaatctcgcgtgg |
40146878 |
T |
|
| Q |
241 |
ttgttgtcatcatcaaatatctaaacccccaacactagagcgttggtttccaaatggtgttcaacagcccatacgatttccttt |
324 |
Q |
| |
|
|||||| || ||||| |||| |||| | ||| ||||| ||||||||||||| |||| ||||||| ||||||||||||||||| |
|
|
| T |
40146879 |
ttgttg-ca--atcaagtatccaaactcataacgctagaacgttggtttccaagtggtattcaacatcccatacgatttccttt |
40146959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 321
Target Start/End: Complemental strand, 8103252 - 8103025
Alignment:
| Q |
94 |
ctacgaaggcacctcaaaaccgttgttggcagttcaagtaacggagctagttgacggtatttttattggttgctcgttcaaccatgttgtcgttgacgga |
193 |
Q |
| |
|
|||||||||||| ||| |||| ||||| || || ||||| || ||| |||||||||| || |||||||||| | || |||||||| || ||||| ||| |
|
|
| T |
8103252 |
ctacgaaggcacatcacaaccattgtttgccgtgcaagtgacagagttagttgacggcatctttattggttttacttttaaccatgtggttgttgatgga |
8103153 |
T |
|
| Q |
194 |
gagtctgtgtggcatttcatcaattcatgggctgaaatatcacgtagttgttgtcatcatcaaatatctaaacccccaacactagagcgttggtttccaa |
293 |
Q |
| |
|
|| | ||| ||||||| ||||| ||||||||||| |||||| || ||||| |||||| ||| |||| | ||||||| || |||||||||||| |
|
|
| T |
8103152 |
acttcggcatggtatttcattaattcgtgggctgaaatctcacgtggtggttgttgcaatcaaacatccaaactctcaacacttgaacgttggtttccag |
8103053 |
T |
|
| Q |
294 |
atggtgttcaacagcccatacgatttcc |
321 |
Q |
| |
|
||||| ||||| |||||||||||||| |
|
|
| T |
8103052 |
atggtattcaatgtcccatacgatttcc |
8103025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 67; Significance: 2e-29; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 457 - 694
Target Start/End: Complemental strand, 6500882 - 6500644
Alignment:
| Q |
457 |
caaaatatcttctctacaagcgcttttaactcacctttggtgctctgtgatgcgttccataaaatttgacccac-aagaagaagtatttaatatagttgt |
555 |
Q |
| |
|
||||||||| || ||||||| |||||||||||| ||||| | |||||||| | ||||| |||| ||||||||| |||||||||| | ||||| | | |
|
|
| T |
6500882 |
caaaatatcatccttacaagctcttttaactcacatttggcgttctgtgatccattccaaaaaacttgacccaccaagaagaagtttacaatatgttcct |
6500783 |
T |
|
| Q |
556 |
gataggagttcgaccaaggttagttccaccgttaccagaagattattttggaaatgcacttataagttgtatggttaaaatgaaagttggggagttgttg |
655 |
Q |
| |
|
||||| ||| |||||||| | ||||||| |||||| ||||||||||||||||||| | ||| ||||| ||||| ||||||| ||| ||||||||| |
|
|
| T |
6500782 |
aataggcgttagaccaaggcttgttccactattaccacaagattattttggaaatgctgtgatagattgtagggttagcatgaaagctggtgagttgttg |
6500683 |
T |
|
| Q |
656 |
gaagaaggtggactttgtaaaggtgcttgtgagatgaac |
694 |
Q |
| |
|
|||||||| || || ||||||||||||| ||||||||| |
|
|
| T |
6500682 |
gaagaaggcgggattggtaaaggtgcttgggagatgaac |
6500644 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 323
Target Start/End: Complemental strand, 6501283 - 6501058
Alignment:
| Q |
94 |
ctacgaaggcacctcaaaaccgttgttggcagttcaagtaacggagctagttgacggtatttttattggttgctcgttcaaccatgttgtcgttgacgga |
193 |
Q |
| |
|
||||||||||| |||||||| ||| | ||||| ||||| || ||| |||||| |||| | |||||||| | ||||||||||| ||| || ||| |
|
|
| T |
6501283 |
ctacgaaggcatatcaaaaccattgcttgcagtgcaagtgacagagttagttggcggtgtctttattgggtttagattcaaccatgtggtcactggtgga |
6501184 |
T |
|
| Q |
194 |
gagtctgtgtggcatttcatcaattcatgggctgaaatatcacgtagttgttgtcatcatcaaatatctaaacccccaacactagagcgttggtttccaa |
293 |
Q |
| |
|
|||| |||||||||| |||| ||| ||||||||||| |||||| ||||||| | |||||||||| |||| |||| ||||||| |||| |||||||| |
|
|
| T |
6501183 |
aagtccatgtggcattttatcagttcctgggctgaaatttcacgtggttgttg---taatcaaatatccaaactcccatcactagaacgtt-gtttccaa |
6501088 |
T |
|
| Q |
294 |
atggtgttcaacagcccatacgatttcctt |
323 |
Q |
| |
|
||| | |||| | ||||||||||||||| |
|
|
| T |
6501087 |
atgatattcagcgttccatacgatttcctt |
6501058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 461 - 540
Target Start/End: Complemental strand, 11969323 - 11969244
Alignment:
| Q |
461 |
atatcttctctacaagcgcttttaactcacctttggtgctctgtgatgcgttccataaaatttgacccacaagaagaagt |
540 |
Q |
| |
|
|||||||| ||||||||||||| |||||||| ||| |||||||| | || || | |||||||||||||||||||||| |
|
|
| T |
11969323 |
atatcttccttacaagcgcttttcactcacctctggcgctctgtggtccgctcaaatcaatttgacccacaagaagaagt |
11969244 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 203 - 231
Target Start/End: Complemental strand, 11969575 - 11969547
Alignment:
| Q |
203 |
tggcatttcatcaattcatgggctgaaat |
231 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
11969575 |
tggcatttcatcaattcatgggctgaaat |
11969547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 206 - 324
Target Start/End: Original strand, 15190642 - 15190757
Alignment:
| Q |
206 |
catttcatcaattcatgggctgaaatatcacgtagttgttgtcatcatcaaatatctaaacccccaacactagagcgttggtttccaaatggtgttcaac |
305 |
Q |
| |
|
||||||||||||||| ||||||||| |||||| ||| ||| |||| |||||||| ||| |||||||| || |||| ||||||||||| |||||| |
|
|
| T |
15190642 |
catttcatcaattcactggctgaaatctcacgtggttcttgccatc---aaatatctgtacctccaacacttgaacgtttatttccaaatggaattcaac |
15190738 |
T |
|
| Q |
306 |
agcccatacgatttccttt |
324 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
15190739 |
gtcccatacgatttccttt |
15190757 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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