View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5705_low_12 (Length: 238)

Name: NF5705_low_12
Description: NF5705
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5705_low_12
NF5705_low_12
[»] chr6 (58 HSPs)
chr6 (1-146)||(15881103-15881248)
chr6 (1-150)||(26475994-26476144)
chr6 (2-147)||(21544362-21544508)
chr6 (3-147)||(18591119-18591262)
chr6 (2-146)||(1227908-1228054)
chr6 (2-146)||(34414269-34414414)
chr6 (3-75)||(9235075-9235147)
chr6 (5-120)||(9676246-9676362)
chr6 (2-145)||(32603486-32603629)
chr6 (2-75)||(7321831-7321904)
chr6 (16-148)||(16119906-16120040)
chr6 (2-74)||(2270716-2270788)
chr6 (16-148)||(33708550-33708683)
chr6 (14-146)||(34077343-34077478)
chr6 (2-146)||(17158114-17158258)
chr6 (5-75)||(22495771-22495841)
chr6 (2-75)||(22362850-22362923)
chr6 (26-146)||(7322017-7322137)
chr6 (3-75)||(10343716-10343788)
chr6 (2-144)||(20504321-20504466)
chr6 (1-75)||(12293092-12293166)
chr6 (14-75)||(686363-686424)
chr6 (2-146)||(10545830-10545974)
chr6 (2-151)||(14291302-14291453)
chr6 (1-64)||(13729018-13729080)
chr6 (26-151)||(21544124-21544249)
chr6 (20-64)||(9222410-9222454)
chr6 (84-148)||(10366603-10366667)
chr6 (5-146)||(13552607-13552747)
chr6 (19-146)||(26882301-26882429)
chr6 (34-120)||(25515993-25516079)
chr6 (26-150)||(2270447-2270571)
chr6 (84-151)||(21226954-21227022)
chr6 (88-151)||(29942444-29942506)
chr6 (1-64)||(29942725-29942788)
chr6 (88-145)||(2270805-2270863)
chr6 (85-147)||(8237637-8237699)
chr6 (84-146)||(25562153-25562214)
chr6 (84-146)||(25567701-25567762)
chr6 (84-146)||(26101667-26101728)
chr6 (2-64)||(31174053-31174115)
chr6 (84-146)||(33552544-33552606)
chr6 (2-147)||(8237890-8238035)
chr6 (20-49)||(10671975-10672004)
chr6 (84-148)||(24602427-24602491)
chr6 (2-75)||(32216814-32216887)
chr6 (84-145)||(33352612-33352672)
chr6 (84-144)||(5832340-5832399)
chr6 (84-147)||(11336652-11336716)
chr6 (14-50)||(18592253-18592289)
chr6 (84-128)||(19325629-19325673)
chr6 (93-149)||(21604360-21604416)
chr6 (85-149)||(24062393-24062455)
chr6 (20-52)||(25070623-25070655)
chr6 (84-146)||(31733281-31733345)
chr6 (84-144)||(31851989-31852049)
chr6 (84-148)||(34348761-34348825)
chr6 (88-144)||(34715905-34715960)
[»] chr8 (68 HSPs)
chr8 (1-146)||(5642938-5643083)
chr8 (1-146)||(5644879-5645024)
chr8 (1-145)||(38711622-38711766)
chr8 (2-145)||(12478805-12478949)
chr8 (2-151)||(34845278-34845427)
chr8 (2-146)||(11830407-11830552)
chr8 (2-146)||(38703599-38703742)
chr8 (2-146)||(13558773-13558918)
chr8 (1-146)||(36637224-36637368)
chr8 (2-145)||(32684561-32684705)
chr8 (2-75)||(11312450-11312523)
chr8 (2-157)||(34227559-34227716)
chr8 (2-148)||(2873681-2873825)
chr8 (1-74)||(9305478-9305551)
chr8 (2-75)||(9662264-9662337)
chr8 (2-75)||(23389252-23389325)
chr8 (2-75)||(41509450-41509523)
chr8 (2-74)||(35839585-35839657)
chr8 (1-146)||(13572771-13572917)
chr8 (2-146)||(25653703-25653848)
chr8 (1-64)||(5566564-5566627)
chr8 (20-147)||(30222020-30222146)
chr8 (1-74)||(35990649-35990723)
chr8 (26-147)||(11830173-11830294)
chr8 (2-75)||(15935456-15935529)
chr8 (2-75)||(31974728-31974801)
chr8 (2-75)||(32393511-32393584)
chr8 (26-146)||(32684819-32684939)
chr8 (3-74)||(10761655-10761725)
chr8 (26-156)||(41509638-41509768)
chr8 (20-64)||(18029830-18029874)
chr8 (1-64)||(27637150-27637213)
chr8 (86-151)||(27637384-27637450)
chr8 (2-48)||(33958778-33958824)
chr8 (1-74)||(8626744-8626816)
chr8 (84-145)||(11105770-11105831)
chr8 (26-150)||(25653960-25654085)
chr8 (26-146)||(12478572-12478692)
chr8 (2-61)||(12936251-12936310)
chr8 (13-64)||(13175102-13175153)
chr8 (3-74)||(29346239-29346309)
chr8 (84-151)||(21692390-21692459)
chr8 (84-150)||(34985319-34985384)
chr8 (2-75)||(24768738-24768811)
chr8 (26-75)||(37545148-37545196)
chr8 (84-148)||(11105946-11106010)
chr8 (95-147)||(11424110-11424162)
chr8 (84-151)||(18367256-18367324)
chr8 (8-64)||(29212106-29212162)
chr8 (84-142)||(4352540-4352599)
chr8 (85-147)||(11272854-11272917)
chr8 (87-146)||(21692605-21692663)
chr8 (26-73)||(29346077-29346123)
chr8 (85-150)||(1552731-1552797)
chr8 (83-149)||(1989487-1989553)
chr8 (84-150)||(3912251-3912317)
chr8 (85-146)||(5566798-5566860)
chr8 (84-146)||(27543410-27543472)
chr8 (84-145)||(5160292-5160353)
chr8 (84-148)||(5160495-5160560)
chr8 (86-147)||(5873685-5873745)
chr8 (105-150)||(17818092-17818137)
chr8 (85-146)||(30221770-30221831)
chr8 (87-136)||(35839672-35839721)
chr8 (84-147)||(22686741-22686804)
chr8 (86-149)||(27637064-27637128)
chr8 (84-128)||(33640944-33640988)
chr8 (85-149)||(36343142-36343204)
[»] chr5 (64 HSPs)
chr5 (1-142)||(21040094-21040235)
chr5 (1-146)||(16920571-16920714)
chr5 (2-145)||(26243332-26243476)
chr5 (2-146)||(11721498-11721642)
chr5 (2-145)||(12147908-12148052)
chr5 (1-145)||(4561603-4561747)
chr5 (2-146)||(37217307-37217449)
chr5 (1-75)||(28796546-28796620)
chr5 (2-75)||(41123214-41123287)
chr5 (2-74)||(30916714-30916786)
chr5 (2-146)||(6117815-6117959)
chr5 (2-74)||(8861277-8861349)
chr5 (2-74)||(23159666-23159738)
chr5 (2-139)||(31312492-31312629)
chr5 (1-64)||(17885783-17885846)
chr5 (3-74)||(29691192-29691262)
chr5 (2-144)||(38874339-38874481)
chr5 (2-75)||(10819454-10819527)
chr5 (2-75)||(22756134-22756207)
chr5 (2-75)||(23188699-23188772)
chr5 (1-146)||(25233626-25233771)
chr5 (1-146)||(25297786-25297931)
chr5 (2-75)||(42097730-42097802)
chr5 (2-146)||(25963034-25963179)
chr5 (26-148)||(29690959-29691079)
chr5 (26-150)||(8855392-8855516)
chr5 (1-64)||(25088629-25088692)
chr5 (1-64)||(25146598-25146661)
chr5 (2-145)||(41254123-41254266)
chr5 (1-64)||(41959064-41959127)
chr5 (2-75)||(7577825-7577899)
chr5 (20-146)||(8855614-8855740)
chr5 (1-146)||(31920258-31920404)
chr5 (86-151)||(33052811-33052875)
chr5 (3-64)||(34048318-34048379)
chr5 (26-146)||(4413926-4414045)
chr5 (2-50)||(4414126-4414174)
chr5 (2-54)||(6896875-6896927)
chr5 (2-74)||(42368636-42368708)
chr5 (84-147)||(711235-711298)
chr5 (83-149)||(9673124-9673191)
chr5 (84-147)||(33659102-33659165)
chr5 (93-147)||(27433730-27433784)
chr5 (84-150)||(28593521-28593586)
chr5 (8-61)||(21125319-21125372)
chr5 (84-149)||(41184938-41185002)
chr5 (84-144)||(4633761-4633820)
chr5 (8-64)||(23108714-23108770)
chr5 (28-64)||(25919815-25919851)
chr5 (24-64)||(27331126-27331166)
chr5 (27-63)||(31567846-31567882)
chr5 (106-150)||(41959170-41959214)
chr5 (84-147)||(10976744-10976806)
chr5 (84-146)||(24197499-24197562)
chr5 (26-73)||(26243173-26243219)
chr5 (96-143)||(30907615-30907662)
chr5 (20-75)||(41185045-41185099)
chr5 (84-146)||(39153415-39153477)
chr5 (86-146)||(25233942-25234003)
chr5 (86-146)||(25298102-25298163)
chr5 (92-145)||(31861731-31861784)
chr5 (84-160)||(2724469-2724544)
chr5 (84-128)||(4414213-4414257)
chr5 (85-145)||(28277459-28277519)
[»] chr2 (76 HSPs)
chr2 (1-145)||(18049048-18049193)
chr2 (1-145)||(1975483-1975628)
chr2 (1-147)||(42794241-42794388)
chr2 (13-146)||(43830502-43830636)
chr2 (2-146)||(33218323-33218468)
chr2 (2-145)||(15543714-15543858)
chr2 (2-146)||(16139031-16139174)
chr2 (2-145)||(19272894-19273037)
chr2 (2-147)||(38950087-38950233)
chr2 (2-146)||(9419500-9419643)
chr2 (2-144)||(776276-776418)
chr2 (2-75)||(38127993-38128066)
chr2 (1-147)||(41100923-41101069)
chr2 (2-75)||(18756421-18756494)
chr2 (1-61)||(7318298-7318358)
chr2 (1-145)||(39751860-39752005)
chr2 (2-146)||(25103730-25103877)
chr2 (17-146)||(29949251-29949379)
chr2 (3-146)||(36795155-36795296)
chr2 (14-64)||(874535-874585)
chr2 (84-166)||(24951883-24951964)
chr2 (14-64)||(30497393-30497443)
chr2 (26-147)||(38949854-38949975)
chr2 (2-71)||(39373194-39373262)
chr2 (2-74)||(16303694-16303766)
chr2 (18-74)||(22846084-22846140)
chr2 (2-69)||(2526581-2526648)
chr2 (1-56)||(4157916-4157971)
chr2 (1-64)||(10071212-10071275)
chr2 (17-64)||(16204390-16204437)
chr2 (2-122)||(29949785-29949905)
chr2 (2-75)||(34831723-34831797)
chr2 (17-74)||(16260760-16260817)
chr2 (21-74)||(19253638-19253691)
chr2 (1-69)||(7007851-7007919)
chr2 (2-74)||(25293408-25293478)
chr2 (2-49)||(18755122-18755169)
chr2 (26-148)||(19253396-19253518)
chr2 (84-147)||(34635939-34636002)
chr2 (2-64)||(11673725-11673787)
chr2 (84-150)||(29640758-29640823)
chr2 (2-64)||(36525507-36525569)
chr2 (88-149)||(14793456-14793516)
chr2 (26-75)||(26498767-26498815)
chr2 (85-150)||(38625133-38625197)
chr2 (4-64)||(28781734-28781794)
chr2 (23-75)||(29096998-29097050)
chr2 (88-147)||(24952056-24952114)
chr2 (26-73)||(25103992-25104038)
chr2 (2-61)||(26498595-26498653)
chr2 (85-147)||(26502589-26502652)
chr2 (85-128)||(29098035-29098078)
chr2 (84-146)||(493726-493788)
chr2 (84-150)||(5558449-5558514)
chr2 (84-146)||(7327767-7327828)
chr2 (27-61)||(11915234-11915268)
chr2 (26-64)||(15580624-15580662)
chr2 (84-149)||(25227819-25227885)
chr2 (26-148)||(34831488-34831610)
chr2 (83-141)||(35337131-35337189)
chr2 (87-152)||(85432-85497)
chr2 (93-146)||(758751-758803)
chr2 (26-63)||(16590530-16590567)
chr2 (85-122)||(22535681-22535718)
chr2 (84-156)||(34635695-34635767)
chr2 (86-145)||(11839027-11839087)
chr2 (27-63)||(16590662-16590698)
chr2 (28-64)||(17188733-17188769)
chr2 (99-147)||(18701798-18701846)
chr2 (85-145)||(28149664-28149723)
chr2 (28-64)||(31377765-31377801)
chr2 (27-63)||(31397474-31397510)
chr2 (28-64)||(31989569-31989605)
chr2 (84-148)||(33441502-33441565)
chr2 (106-146)||(39752197-39752237)
chr2 (95-151)||(45464458-45464514)
[»] chr7 (78 HSPs)
chr7 (1-145)||(14187624-14187769)
chr7 (1-145)||(20164103-20164248)
chr7 (2-150)||(17052047-17052194)
chr7 (2-146)||(21443864-21444009)
chr7 (2-75)||(35158414-35158487)
chr7 (2-74)||(26254629-26254701)
chr7 (2-146)||(2624404-2624547)
chr7 (2-145)||(5864444-5864588)
chr7 (2-75)||(442766-442839)
chr7 (2-147)||(47370384-47370530)
chr7 (2-146)||(12005263-12005407)
chr7 (2-147)||(36374409-36374557)
chr7 (1-72)||(21022463-21022534)
chr7 (3-145)||(34436848-34436991)
chr7 (17-144)||(49094193-49094319)
chr7 (1-146)||(3402033-3402179)
chr7 (2-75)||(15721161-15721234)
chr7 (2-75)||(21521886-21521959)
chr7 (93-151)||(1492754-1492812)
chr7 (26-149)||(13263865-13263987)
chr7 (2-72)||(40938340-40938410)
chr7 (2-75)||(11576640-11576713)
chr7 (26-148)||(31863967-31864088)
chr7 (2-50)||(24478104-24478152)
chr7 (3-128)||(32946486-32946611)
chr7 (3-75)||(41380620-41380691)
chr7 (2-151)||(17167700-17167849)
chr7 (2-61)||(31749518-31749577)
chr7 (1-64)||(44448551-44448614)
chr7 (85-150)||(13286862-13286928)
chr7 (2-75)||(31750920-31750994)
chr7 (6-149)||(38192592-38192734)
chr7 (26-147)||(15720927-15721048)
chr7 (84-145)||(22335515-22335576)
chr7 (84-145)||(43596316-43596377)
chr7 (17-74)||(43706998-43707055)
chr7 (1-61)||(34258189-34258249)
chr7 (1-64)||(1572964-1573027)
chr7 (2-128)||(13253581-13253711)
chr7 (2-73)||(13592940-13593011)
chr7 (2-49)||(30632227-30632274)
chr7 (84-151)||(45639721-45639787)
chr7 (2-56)||(2240480-2240534)
chr7 (26-144)||(2241112-2241230)
chr7 (84-142)||(2301137-2301194)
chr7 (84-146)||(24374266-24374328)
chr7 (86-147)||(44448318-44448380)
chr7 (2-75)||(2624645-2624716)
chr7 (85-146)||(38192961-38193022)
chr7 (84-149)||(44412293-44412358)
chr7 (26-74)||(17051887-17051935)
chr7 (87-147)||(19336282-19336342)
chr7 (26-146)||(21522026-21522146)
chr7 (84-151)||(24374497-24374565)
chr7 (3-74)||(31308083-31308155)
chr7 (8-64)||(33440946-33441002)
chr7 (14-61)||(8391204-8391251)
chr7 (2-64)||(10067984-10068047)
chr7 (84-147)||(15108321-15108384)
chr7 (84-147)||(24478022-24478084)
chr7 (84-146)||(1492963-1493025)
chr7 (84-150)||(27999983-28000048)
chr7 (84-146)||(28000115-28000176)
chr7 (84-146)||(30335179-30335241)
chr7 (85-151)||(45163907-45163972)
chr7 (84-146)||(45633696-45633757)
chr7 (84-149)||(47370148-47370214)
chr7 (97-151)||(48741820-48741874)
chr7 (31-64)||(2513997-2514030)
chr7 (26-71)||(11576827-11576871)
chr7 (84-145)||(15037257-15037317)
chr7 (86-151)||(23784578-23784642)
chr7 (84-147)||(1263940-1264004)
chr7 (28-64)||(1853345-1853381)
chr7 (93-149)||(15037411-15037467)
chr7 (87-147)||(24555901-24555960)
chr7 (86-146)||(30335381-30335440)
chr7 (106-146)||(34436608-34436648)
[»] chr4 (64 HSPs)
chr4 (1-145)||(22854195-22854340)
chr4 (1-151)||(21508055-21508203)
chr4 (1-150)||(41325208-41325358)
chr4 (2-146)||(49166876-49167021)
chr4 (2-146)||(3652503-3652647)
chr4 (1-146)||(7913118-7913258)
chr4 (5-151)||(50719826-50719972)
chr4 (2-75)||(5514426-5514499)
chr4 (1-74)||(23184954-23185027)
chr4 (2-75)||(18510214-18510287)
chr4 (2-75)||(29104393-29104466)
chr4 (2-75)||(39133315-39133388)
chr4 (1-146)||(49296001-49296147)
chr4 (2-74)||(31226254-31226326)
chr4 (2-128)||(14946188-14946315)
chr4 (1-75)||(24675478-24675552)
chr4 (2-73)||(30919147-30919218)
chr4 (1-75)||(4102987-4103061)
chr4 (3-150)||(32681693-32681844)
chr4 (3-75)||(27626901-27626972)
chr4 (1-157)||(32682163-32682317)
chr4 (20-75)||(36395405-36395460)
chr4 (2-56)||(12388314-12388368)
chr4 (26-147)||(3652269-3652389)
chr4 (26-146)||(49166644-49166764)
chr4 (84-146)||(13910622-13910684)
chr4 (2-75)||(5114278-5114351)
chr4 (84-145)||(5401994-5402055)
chr4 (84-152)||(13910847-13910916)
chr4 (2-50)||(15786094-15786142)
chr4 (2-74)||(17696138-17696210)
chr4 (84-148)||(24670722-24670786)
chr4 (26-150)||(31226438-31226561)
chr4 (84-151)||(34853350-34853418)
chr4 (2-73)||(25244464-25244535)
chr4 (2-64)||(14121329-14121391)
chr4 (84-146)||(28292280-28292341)
chr4 (19-64)||(16589227-16589272)
chr4 (20-73)||(17251495-17251548)
chr4 (85-146)||(18165204-18165265)
chr4 (85-146)||(18320693-18320754)
chr4 (84-149)||(31110248-31110313)
chr4 (2-75)||(31857122-31857195)
chr4 (2-75)||(50603942-50604015)
chr4 (2-75)||(50773520-50773593)
chr4 (26-73)||(5114129-5114176)
chr4 (2-145)||(14574840-14574984)
chr4 (26-73)||(26040763-26040810)
chr4 (26-73)||(29104232-29104279)
chr4 (84-151)||(46360890-46360956)
chr4 (84-146)||(20514654-20514716)
chr4 (85-146)||(22853961-22854023)
chr4 (86-148)||(34025911-34025973)
chr4 (85-147)||(36405657-36405718)
chr4 (84-146)||(36405850-36405911)
chr4 (2-64)||(49300967-49301029)
chr4 (26-63)||(9780544-9780581)
chr4 (84-144)||(13334823-13334884)
chr4 (83-128)||(13780409-13780454)
chr4 (84-148)||(15782259-15782323)
chr4 (84-147)||(5401759-5401823)
chr4 (89-148)||(21798329-21798389)
chr4 (83-146)||(50084821-50084885)
chr4 (93-145)||(51353439-51353490)
[»] chr1 (49 HSPs)
chr1 (1-142)||(6284180-6284322)
chr1 (1-144)||(9209806-9209950)
chr1 (1-146)||(26398856-26399000)
chr1 (1-145)||(5457311-5457454)
chr1 (1-144)||(20158653-20158796)
chr1 (1-147)||(21770954-21771099)
chr1 (2-142)||(31883692-31883830)
chr1 (2-147)||(5932194-5932339)
chr1 (2-75)||(19967794-19967867)
chr1 (2-75)||(44961236-44961309)
chr1 (2-75)||(27666148-27666221)
chr1 (88-146)||(27815225-27815283)
chr1 (14-128)||(22387161-22387275)
chr1 (2-75)||(26190962-26191035)
chr1 (2-75)||(46528830-46528903)
chr1 (2-150)||(21853555-21853703)
chr1 (26-146)||(26190729-26190849)
chr1 (85-146)||(37356265-37356326)
chr1 (2-73)||(14909833-14909904)
chr1 (2-147)||(16421113-16421258)
chr1 (1-43)||(50344995-50345037)
chr1 (26-151)||(21770748-21770873)
chr1 (84-149)||(23889673-23889737)
chr1 (83-151)||(31883447-31883515)
chr1 (1-64)||(15336570-15336634)
chr1 (84-151)||(42736608-42736678)
chr1 (2-50)||(47979891-47979939)
chr1 (84-148)||(50721718-50721781)
chr1 (87-146)||(8620192-8620251)
chr1 (84-150)||(24004514-24004581)
chr1 (84-150)||(24730051-24730118)
chr1 (84-149)||(15961580-15961646)
chr1 (88-146)||(26486770-26486827)
chr1 (84-146)||(39160433-39160494)
chr1 (84-146)||(52413120-52413181)
chr1 (84-128)||(2059422-2059467)
chr1 (97-150)||(2472385-2472437)
chr1 (85-146)||(15790470-15790531)
chr1 (85-146)||(16699102-16699163)
chr1 (88-148)||(40091467-40091528)
chr1 (149-190)||(48526868-48526909)
chr1 (84-145)||(50879822-50879883)
chr1 (84-128)||(21853432-21853476)
chr1 (27-63)||(22151971-22152007)
chr1 (84-159)||(22604658-22604733)
chr1 (85-149)||(27794591-27794655)
chr1 (106-146)||(30147064-30147104)
chr1 (85-145)||(42736819-42736878)
chr1 (84-147)||(46208197-46208261)
[»] scaffold0121 (1 HSPs)
scaffold0121 (2-142)||(12699-12839)
[»] scaffold0022 (1 HSPs)
scaffold0022 (2-147)||(63029-63175)
[»] chr3 (59 HSPs)
chr3 (2-150)||(300399-300548)
chr3 (14-149)||(14004227-14004362)
chr3 (2-147)||(19110940-19111085)
chr3 (2-145)||(52839298-52839442)
chr3 (2-147)||(3505000-3505144)
chr3 (1-75)||(14220440-14220514)
chr3 (1-75)||(14224667-14224741)
chr3 (2-122)||(14869954-14870075)
chr3 (2-145)||(5571952-5572096)
chr3 (2-73)||(14154850-14154921)
chr3 (2-132)||(13041375-13041506)
chr3 (2-132)||(13049452-13049583)
chr3 (1-75)||(28735673-28735747)
chr3 (2-75)||(48689304-48689377)
chr3 (1-64)||(26770002-26770065)
chr3 (2-75)||(16896004-16896077)
chr3 (2-75)||(22818114-22818187)
chr3 (2-71)||(31073764-31073833)
chr3 (2-75)||(38703055-38703128)
chr3 (26-145)||(300167-300286)
chr3 (1-61)||(23293494-23293554)
chr3 (26-150)||(52839556-52839680)
chr3 (84-151)||(8355563-8355630)
chr3 (2-64)||(7226270-7226332)
chr3 (26-148)||(22817878-22818000)
chr3 (2-72)||(32721582-32721652)
chr3 (2-144)||(7272728-7272869)
chr3 (26-147)||(19111197-19111317)
chr3 (85-128)||(12767164-12767207)
chr3 (84-150)||(15096519-15096586)
chr3 (1-64)||(39218732-39218795)
chr3 (84-151)||(39846577-39846643)
chr3 (26-147)||(5572210-5572331)
chr3 (23-64)||(54571206-54571247)
chr3 (87-146)||(39846374-39846434)
chr3 (87-147)||(41747304-41747364)
chr3 (84-148)||(48418651-48418714)
chr3 (5-73)||(52962402-52962469)
chr3 (84-151)||(1351464-1351530)
chr3 (84-147)||(3820707-3820770)
chr3 (84-147)||(15096702-15096765)
chr3 (84-146)||(23626120-23626183)
chr3 (87-146)||(29013405-29013464)
chr3 (83-146)||(48489006-48489068)
chr3 (84-146)||(51252280-51252343)
chr3 (84-145)||(14824750-14824812)
chr3 (84-146)||(19301178-19301239)
chr3 (88-150)||(28208145-28208207)
chr3 (27-69)||(30226315-30226357)
chr3 (2-52)||(45151852-45151902)
chr3 (87-149)||(49872949-49873010)
chr3 (84-146)||(53806793-53806854)
chr3 (106-147)||(7226066-7226107)
chr3 (5-62)||(25024622-25024679)
chr3 (1-50)||(44963250-44963299)
chr3 (93-150)||(48489246-48489303)
chr3 (85-145)||(20956943-20957003)
chr3 (106-146)||(26770257-26770297)
chr3 (2-50)||(36727726-36727774)
[»] scaffold0002 (2 HSPs)
scaffold0002 (1-145)||(332295-332440)
scaffold0002 (2-75)||(432466-432539)
[»] scaffold0430 (1 HSPs)
scaffold0430 (2-142)||(12487-12628)
[»] scaffold0154 (2 HSPs)
scaffold0154 (2-75)||(9421-9494)
scaffold0154 (26-75)||(9291-9339)
[»] scaffold0258 (1 HSPs)
scaffold0258 (17-146)||(18642-18770)
[»] scaffold1462 (1 HSPs)
scaffold1462 (1-64)||(310-373)
[»] scaffold0004 (1 HSPs)
scaffold0004 (2-141)||(212712-212852)
[»] scaffold0289 (2 HSPs)
scaffold0289 (3-65)||(6956-7018)
scaffold0289 (26-148)||(6723-6843)
[»] scaffold0009 (1 HSPs)
scaffold0009 (84-146)||(149985-150047)
[»] scaffold0769 (2 HSPs)
scaffold0769 (84-147)||(3912-3975)
scaffold0769 (84-156)||(4147-4219)
[»] scaffold0142 (1 HSPs)
scaffold0142 (84-146)||(34568-34630)
[»] scaffold1797 (1 HSPs)
scaffold1797 (83-151)||(673-742)
[»] scaffold0450 (1 HSPs)
scaffold0450 (85-150)||(7854-7918)
[»] scaffold0079 (1 HSPs)
scaffold0079 (85-146)||(6809-6870)
[»] scaffold0192 (1 HSPs)
scaffold0192 (84-146)||(14443-14505)
[»] scaffold0148 (1 HSPs)
scaffold0148 (84-151)||(34978-35045)
[»] scaffold0111 (1 HSPs)
scaffold0111 (84-150)||(29455-29522)
[»] scaffold0010 (1 HSPs)
scaffold0010 (84-146)||(145327-145390)
[»] scaffold0005 (1 HSPs)
scaffold0005 (2-145)||(242391-242535)
[»] scaffold0511 (1 HSPs)
scaffold0511 (88-146)||(5427-5484)
[»] scaffold0013 (1 HSPs)
scaffold0013 (84-145)||(149615-149677)
[»] scaffold0041 (1 HSPs)
scaffold0041 (85-122)||(38072-38109)
[»] scaffold0031 (1 HSPs)
scaffold0031 (86-146)||(2057-2118)
[»] scaffold0019 (1 HSPs)
scaffold0019 (84-121)||(174600-174637)
[»] scaffold0577 (1 HSPs)
scaffold0577 (105-145)||(1846-1886)
[»] scaffold0085 (1 HSPs)
scaffold0085 (106-146)||(25027-25067)
[»] scaffold0003 (1 HSPs)
scaffold0003 (28-64)||(306724-306760)


Alignment Details
Target: chr6 (Bit Score: 109; Significance: 6e-55; HSPs: 58)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 15881248 - 15881103
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaa 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||    
T  15881248 tctcaaattacagggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcaaaaaaattattttacagggggaaa 15881149  T
Q  101 atcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    | || ||||||||||||||||| |||||||||||||||||||||||    
T  15881148 accataaatgacctaaattacagggggttaaagcactattaaccct 15881103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 26475994 - 26476144
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttaca-gggggaa 99  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||       |||||||||| |||||||    
T  26475994 tctcaaattacagggggtgaaatttttcatgaaggtctaaaaccaaaaaatcttcatattacaaggatgaaattcaaaaaaattattttacaggggggaa 26476093  T
Q  100 aatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaa 150  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  26476094 aatcagaaatgacctaaattacagggggttgaagcactattaaccctaaaa 26476144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 147
Target Start/End: Original strand, 21544362 - 21544508
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttaca-gggggaaa 100  Q
    ||||||||||| || |||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||        ||||||||| ||||||||    
T  21544362 ctcaaattacagggagtgaaattttccatgaaggtccaaaaccaaaaaatcttcaaattacaaggatgaaattcaaaaaaaatattttacaggggggaaa 21544461  T
Q  101 atcagaaatgacctaaattacaaggggttaaagcactattaacccta 147  Q
    | | ||||||||||| |||||| |||| |||||||||||||||||||    
T  21544462 accggaaatgacctatattacaggggggtaaagcactattaacccta 21544508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 3 - 147
Target Start/End: Complemental strand, 18591262 - 18591119
Alignment:
Q  3 tcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaaat 102  Q
    |||||||||| ||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||        ||||||||||||||||||     
T  18591262 tcaaattacagggggtgaaattttccgtgaaggtccaaaaccaaaaaatcttcaaattacaatgatgaaattcaaaacaaatattttacagggggaaaac 18591163  T
Q  103 cagaaatgacctaaattacaaggggttaaagcactattaacccta 147  Q
    | ||||||||||| ||||  ||||| |||| ||||||||||||||    
T  18591162 cggaaatgacctatatta-taggggataaaacactattaacccta 18591119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 146
Target Start/End: Original strand, 1227908 - 1228054
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttaca-gggggaaa 100  Q
    ||||||||||| || |||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||        ||||||||| ||||||||    
T  1227908 ctcaaattacagggagtgaaattttccatgaaggtccaaaaccaaaaaatcttcaaattacaaggatgaaattcaaaaaaaatattttacaggggggaaa 1228007  T
Q  101 atcagaaatgacctaaattaca-aggggttaaagcactattaaccct 146  Q
    | | ||||||||||| ||||||  |||| ||||||||||||||||||    
T  1228008 accggaaatgacctatattacagggggggtaaagcactattaaccct 1228054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 146
Target Start/End: Complemental strand, 34414414 - 34414269
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttac-agggggaaa 100  Q
    ||||||||||| |||||||||||||   |||||||||||||||||||||| |||| ||||||| ||||||||||        |||||||| |||||||||    
T  34414414 ctcaaattacagggggtgaaattttcattgaaggtccaaaaccaaaaaatattcaaattacaaggatgaaattcaaaaaaaatattttacaagggggaaa 34414315  T
Q  101 atcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    |   ||||||||||| |||||| |||| |||| |||||||||||||    
T  34414314 actggaaatgacctatattacacgggggtaaaacactattaaccct 34414269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 9235075 - 9235147
Alignment:
Q  3 tcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    |||||||||| ||||||||||||| ||||| ||||||||||||||||||||||| ||||||| ||||||||||    
T  9235075 tcaaattacagggggtgaaattttccatgatggtccaaaaccaaaaaatcttcaaattacaaggatgaaattc 9235147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 9676362 - 9676246
Alignment:
Q  5 aaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttaca-gggggaaaatc 103  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||        ||||||||| ||||||||| |    
T  9676362 aaattagagggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcaaattataaggatgaaattcaaaaaaagtattttacaggggggaaaacc 9676263  T
Q  104 agaaatgacctaaatta 120  Q
     ||||||||||| ||||    
T  9676262 ggaaatgacctatatta 9676246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 145
Target Start/End: Complemental strand, 32603629 - 32603486
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaa-aaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaa 100  Q
    ||||||||||| || |||||||||||||||||||||||||||||| ||||  |||| ||||||| |||||||||         |||||||||||||||||    
T  32603629 ctcaaattacagggagtgaaatttttcatgaaggtccaaaaccaaaaaaaaattcaaattacaaggatgaaatt-aaaaaaaatattttacagggggaaa 32603531  T
Q  101 atcagaaatgacctaaattacaaggggttaaagcactattaaccc 145  Q
    ||| ||||||||||| |||| | | || ||||||||| |||||||    
T  32603530 atcggaaatgacctatattatatgagggtaaagcactgttaaccc 32603486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 7321904 - 7321831
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    ||||||||||| || |||||||||| | ||||||||||||||||||||||||||| ||||||| ||||||||||    
T  7321904 ctcaaattacagggagtgaaattttccgtgaaggtccaaaaccaaaaaatcttcaaattacaaggatgaaattc 7321831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 16119906 - 16120040
Alignment:
Q  16 ggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttaca-gggggaaaatc-agaaatgacc 113  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||  |||||||||        ||||||||| ||||||||||| | ||||||||    
T  16119906 ggtgaaattttccatgaaggtccaaaaccaaaaaatcttcaaattacaagaatgaaattcaaagaaaatattttacatgggggaaaatcgaaaaatgacc 16120005  T
Q  114 taaattacaaggggttaaagcactattaaccctaa 148  Q
     | |||| | |||| |||| |||||||||||||||    
T  16120006 catattatagggggataaaacactattaaccctaa 16120040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 2270716 - 2270788
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaatt 74  Q
    ||||||||| | || |||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||    
T  2270716 ctcaaattatagggagtgaaattttccatgaaggtccaaaaccaaaaaatcttcaaattacaaggatgaaatt 2270788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 33708683 - 33708550
Alignment:
Q  16 ggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc-nnnnnnnttattttacagggggaaaatcagaaatgacct 114  Q
    ||||||||||| |||||||||||||||||||||| ||||| |||||||| ||| ||||||        ||||||||||||||  ||| || |||| ||||    
T  33708683 ggtgaaattttccatgaaggtccaaaaccaaaaactcttcgtattacaaggataaaattcaaaaaaaattattttacaggggagaaaccataaataacct 33708584  T
Q  115 aaattacaaggggttaaagcactattaaccctaa 148  Q
    |||||||| |  | ||||||||||||||||||||    
T  33708583 aaattacaggaaggtaaagcactattaaccctaa 33708550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 34077478 - 34077343
Alignment:
Q  14 ggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc---nnnnnnnttattttacagggggaaaatcagaaatg 110  Q
    |||||||||||||||||||||||||||||||| |||||||| | ||||||| ||||||||||            ||||||||||||||||| | ||||||    
T  34077478 ggggtgaaatttttcatgaaggtccaaaaccataaaatctttaaattacaaggatgaaattcaaaaaaaaaaagattttacagggggaaaaccggaaatg 34077379  T
Q  111 acctaaattacaaggggttaaagcactattaaccct 146  Q
    |  || |||||| ||||||||| |||||||||||||    
T  34077378 atttatattacagggggttaaaacactattaaccct 34077343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 146
Target Start/End: Complemental strand, 17158258 - 17158114
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaaa 101  Q
    ||||||||| | || |||||||||| ||||||||| ||||||||||||||||||| ||||||| |||||||||          ||||||||||||| |||    
T  17158258 ctcaaattatagggagtgaaattttccatgaaggtacaaaaccaaaaaatcttcaaattacaaggatgaaatttaaaaaaaaaattttacaggggggaaa 17158159  T
Q  102 tcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    ||  ||||||| || |||||| |||  |||| |||||||||||||    
T  17158158 tcgaaaatgacatatattacaggggtataaaacactattaaccct 17158114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 22495841 - 22495771
Alignment:
Q  5 aaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    |||||||| || ||||||||||  |||||||||||||||||||||||||||| ||||||| ||||||||||    
T  22495841 aaattacagggagtgaaattttctatgaaggtccaaaaccaaaaaatcttcaaattacaaggatgaaattc 22495771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 22362850 - 22362923
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    ||||||||||| |||||||||||||  ||||||||| ||||||||||||| |||| ||||||| ||||||||||    
T  22362850 ctcaaattacagggggtgaaattttctatgaaggtcaaaaaccaaaaaatattcaaattacaaggatgaaattc 22362923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 26 - 146
Target Start/End: Original strand, 7322017 - 7322137
Alignment:
Q  26 ttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacaggggg-aaaatcagaaatgacctaaattacaag 124  Q
    |||||||||||||||||||||||| |||||| |||||||  | ||||| |        ||||||||| |||| |||||||||||||||||| |||||| |    
T  7322017 ttcatgaaggtccaaaaccaaaaa-tcttcaaattacaagaacgaaatccaaaagaaatattttacaaggggtaaaatcagaaatgacctatattacagg 7322115  T
Q  125 gggttaaagcactattaaccct 146  Q
    |||||||| |||||||||||||    
T  7322116 gggttaaaacactattaaccct 7322137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 10343716 - 10343788
Alignment:
Q  3 tcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    ||||| |||| || |||||||||| || |||||||||||||||||||||||||| ||||||| ||||||||||    
T  10343716 tcaaactacagggagtgaaattttccacgaaggtccaaaaccaaaaaatcttcaaattacaaggatgaaattc 10343788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 144
Target Start/End: Original strand, 20504321 - 20504466
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaa----atcttcatattacaatgatgaaattcnnnnnnnttattttacaggggg 97  Q
    ||||||||||||||||||||||||||| ||||||| |||||| |||||    ||||||| ||||||| |||||||||         ||||||||| | |     
T  20504321 ctcaaattacaaggggtgaaatttttcgtgaaggttcaaaacaaaaaaaaatatcttcaaattacaaggatgaaattgaaaaaaaatattttacaagaga 20504420  T
Q  98 aaaatcagaaatgacctaaattacaaggggttaaagcactattaacc 144  Q
    |||| ||||||||||||| |||||| |||| |||| |||||||||||    
T  20504421 aaaaccagaaatgacctatattacatgggg-taaaacactattaacc 20504466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 12293092 - 12293166
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    |||||||||| | ||| ||||||||| ||||||||| ||||||||||||||||||| |||| || ||||||||||    
T  12293092 tctcaaattataggggatgaaattttccatgaaggttcaaaaccaaaaaatcttcaaattataaggatgaaattc 12293166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 75
Target Start/End: Complemental strand, 686424 - 686363
Alignment:
Q  14 ggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    |||||||||||||||||||||||||||||||||||||   ||| ||||||| ||||||||||    
T  686424 ggggtgaaatttttcatgaaggtccaaaaccaaaaaaaaatcaaattacaaggatgaaattc 686363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 146
Target Start/End: Complemental strand, 10545974 - 10545830
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacaggggg-aaa 100  Q
    ||||||||| | ||||  |||||||||||||||||| |||||||||||||||| | ||||||| || | ||| |        |||||||||||||| |||    
T  10545974 ctcaaattatagggggcaaaatttttcatgaaggtctaaaaccaaaaaatcttaaaattacaaggacggaatcccaaaaaaatattttacagggggaaaa 10545875  T
Q  101 atcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    |||  |||||||||| ||||| ||||| |||| |||||||||||||    
T  10545874 atcgaaaatgacctatattac-agggggtaaaacactattaaccct 10545830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 151
Target Start/End: Original strand, 14291302 - 14291453
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaa-ggtccaaaaccaaaaaatcttcatattacaatgatgaaattc--nnnnnnnttattttacaggggga 98  Q
    ||||||||||| ||| ||||||||| |||||| ||| ||||||||||||||||||  ||||||| ||||||||||          ||||||||| | ||     
T  14291302 ctcaaattacaggggatgaaattttccatgaaaggttcaaaaccaaaaaatcttcgaattacaaggatgaaattcaaaaaaaaaatattttacaagaggg 14291401  T
Q  99 aaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaat 151  Q
    |||||||||||| |||| ||||| ||||  |||| ||||||||||||||||||    
T  14291402 aaatcagaaatggcctatattac-agggagtaaaacactattaaccctaaaat 14291453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 13729080 - 13729018
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaa 64  Q
    ||||||||||||||||| ||| |||| |||||||||| |||||||||||||||||| |||||||    
T  13729080 tctcaaattacaaggggcgaa-ttttccatgaaggtctaaaaccaaaaaatcttcaaattacaa 13729018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 21544249 - 21544124
Alignment:
Q  26 ttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacaggggg-aaaatcagaaatgacctaaattacaag 124  Q
    |||||||||||||||||||||||| || ||| ||||||| || ||||| |        |||||||||||||| |||| | ||||||||||| |||||| |    
T  21544249 ttcatgaaggtccaaaaccaaaaa-tcatcaaattacaaggacgaaatccaaaaaaaatattttacagggggtaaaaccggaaatgacctatattacagg 21544151  T
Q  125 gggttaaagcactattaaccctaaaat 151  Q
    ||| |||| ||||||||||||| ||||    
T  21544150 ggggtaaaacactattaacccttaaat 21544124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 9222454 - 9222410
Alignment:
Q  20 aaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaa 64  Q
    |||||||||||||||||| |||||||||||||||||| |||||||    
T  9222454 aaatttttcatgaaggtctaaaaccaaaaaatcttcaaattacaa 9222410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 148
Target Start/End: Original strand, 10366603 - 10366667
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaa 148  Q
    ||||||| |||||||||| || |||||||||| ||||||||||| |||| ||| |||||||||||    
T  10366603 tattttatagggggaaaaccaaaaatgacctatattacaagggggtaaaacacaattaaccctaa 10366667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 146
Target Start/End: Complemental strand, 13552747 - 13552607
Alignment:
Q  5 aaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaaatca 104  Q
    |||||||| ||||| ||| |||||||||||||  |||||||||||||| | | ||||||| || | ||| |        |||||||||||||| ||| |     
T  13552747 aaattacagggggtaaaaattttcatgaaggtataaaaccaaaaaatcgtaaaattacaaggacggaatcccaaaaaaatattttacaggggggaaaccg 13552648  T
Q  105 gaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    ||||||||||| ||||||| ||| |||| |||||||||||||    
T  13552647 gaaatgacctatattacaaaggg-taaaacactattaaccct 13552607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 146
Target Start/End: Original strand, 26882301 - 26882429
Alignment:
Q  19 gaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagg-gggaaaatcagaaatgacctaaa 117  Q
    |||||||| |||||||||||||||||||||||| |||| ||||||| || ||||            ||||||||||  |||||| | ||||||||||| |    
T  26882301 gaaattttccatgaaggtccaaaaccaaaaaatattcaaattacaaggacgaaaactaaacaaaaaattttacaggatggaaaaccggaaatgacctata 26882400  T
Q  118 ttacaaggggttaaagcactattaaccct 146  Q
    ||||| |||| ||||||||||||||||||    
T  26882401 ttacaggggggtaaagcactattaaccct 26882429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 120
Target Start/End: Complemental strand, 25516079 - 25515993
Alignment:
Q  34 ggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaaatcagaaatgacctaaatta 120  Q
    ||||||||||||||||||||||| |||| || ||||||||||        ||||||||| |||| ||| ||||||||||||| ||||    
T  25516079 ggtccaaaaccaaaaaatcttcaaattataaggatgaaattcaaaaaaaatattttacatgggggaaaccagaaatgacctatatta 25515993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 150
Target Start/End: Complemental strand, 2270571 - 2270447
Alignment:
Q  26 ttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaaatcag-aaatgacctaaattacaag 124  Q
    |||||||||||||||||||||||| ||||   ||||||| || ||||| |        |||||||||||||| ||| | | |||||||||| |||||| |    
T  2270571 ttcatgaaggtccaaaaccaaaaa-tctttgaattacaaggacgaaatccaaaaaaaatattttacagggggtaaaactggaaatgacctatattacagg 2270473  T
Q  125 gggttaaagcactattaaccctaaaa 150  Q
    ||| |||| |||||||||||||||||    
T  2270472 ggggtaaaacactattaaccctaaaa 2270447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 151
Target Start/End: Original strand, 21226954 - 21227022
Alignment:
Q  84 tattttacaggggg-aaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaat 151  Q
    |||||||||||||| |||| || |||||||||| |||||| |||| |||| ||| ||||||||||||||    
T  21226954 tattttacaggggggaaaaccaaaaatgacctatattacaggggggtaaaacaccattaaccctaaaat 21227022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 151
Target Start/End: Original strand, 29942444 - 29942506
Alignment:
Q  88 ttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaat 151  Q
    |||||||||||||| ||||||||||||| ||||| ||||| |||||  ||||||||||| ||||    
T  29942444 ttacagggggaaaaccagaaatgacctatattac-agggggtaaagacctattaacccttaaat 29942506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 29942725 - 29942788
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaa 64  Q
    |||||||||||| || || ||||||  |||||| ||| |||||||||||||||||| |||||||    
T  29942725 tctcaaattacagggagtaaaatttgccatgaaagtctaaaaccaaaaaatcttcaaattacaa 29942788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 145
Target Start/End: Original strand, 2270805 - 2270863
Alignment:
Q  88 ttacaggggg-aaaatcagaaatgacctaaattacaaggggttaaagcactattaaccc 145  Q
    |||||||||| |||| ||||||||||||| |||||| |||| |||||||| ||||||||    
T  2270805 ttacaggggggaaaaccagaaatgacctatattacaggggggtaaagcaccattaaccc 2270863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 147
Target Start/End: Complemental strand, 8237699 - 8237637
Alignment:
Q  85 attttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaacccta 147  Q
    |||||||||||| |||| |  |||||||||| |||||| |||| ||||||| |||||||||||    
T  8237699 attttacaggggaaaaaccgaaaatgacctatattacaggggggtaaagcattattaacccta 8237637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 146
Target Start/End: Complemental strand, 25562214 - 25562153
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    ||||| ||||||||||||| | |||||||||| ||||| ||||| |||||||| |||||||||    
T  25562214 tatttgacagggggaaaataaaaaatgacctatattac-agggggtaaagcaccattaaccct 25562153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 146
Target Start/End: Complemental strand, 25567762 - 25567701
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    |||||||||||||||||| || |||||||||| ||||||  ||| |||||||| |||||||||    
T  25567762 tattttacagggggaaaaccaaaaatgacctatattacataggg-taaagcaccattaaccct 25567701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 146
Target Start/End: Complemental strand, 26101728 - 26101667
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    ||||| ||||||||||||| | |||||||||| ||||| ||||| |||||||| |||||||||    
T  26101728 tatttgacagggggaaaataaaaaatgacctatattac-agggggtaaagcaccattaaccct 26101667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 31174115 - 31174053
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaa 64  Q
    ||||||||| | ||||  ||| |||||||||||||| |||| ||||||||||||| |||||||    
T  31174115 ctcaaattatagggggcaaaaattttcatgaaggtctaaaatcaaaaaatcttcaaattacaa 31174053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 146
Target Start/End: Complemental strand, 33552606 - 33552544
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    |||||||||||||||||| || |||||||||| ||||| ||||| ||||| ||  ||||||||    
T  33552606 tattttacagggggaaaaccaaaaatgacctatattactagggggtaaagtacccttaaccct 33552544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 147
Target Start/End: Original strand, 8237890 - 8238035
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacaggg-ggaaa 100  Q
    ||||||||||| ||||  ||| |||||||||||||| ||||||||||| || | | ||||||  || | ||| |        |||||||||||| |||||    
T  8237890 ctcaaattacagggggcaaaaattttcatgaaggtctaaaaccaaaaattcgtaaaattacacggacggaatcccaaaaaaatattttacagggtggaaa 8237989  T
Q  101 atcagaaatgacctaaattacaaggggttaaagcactattaacccta 147  Q
    | | ||||||||||| ||||| ||||| |||| ||||||||||||||    
T  8237990 accggaaatgacctatattac-agggggtaaaacactattaacccta 8238035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 49
Target Start/End: Original strand, 10671975 - 10672004
Alignment:
Q  20 aaatttttcatgaaggtccaaaaccaaaaa 49  Q
    ||||||||||||||||||||||||||||||    
T  10671975 aaatttttcatgaaggtccaaaaccaaaaa 10672004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 24602491 - 24602427
Alignment:
Q  84 tattttacagggggaaaatcagaaa-tgacctaaattacaaggggttaaagcactattaaccctaa 148  Q
    |||||||||||||| ||| || ||| ||||||| ||||||||||| |||||||| |||||||||||    
T  24602491 tattttacaggggggaaaacaaaaaatgacctatattacaagggg-taaagcaccattaaccctaa 24602427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 32216887 - 32216814
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    |||||||||||  || ||||||||| ||| ||  || ||||| |||||||||||| ||||||| ||||||||||    
T  32216887 ctcaaattacagaggatgaaattttccataaatatcaaaaacaaaaaaatcttcaaattacaaggatgaaattc 32216814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 145
Target Start/End: Original strand, 33352612 - 33352672
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccc 145  Q
    ||||||||||||||||||  | |||||||||| ||||| ||||| |||||||| ||||||||    
T  33352612 tattttacagggggaaaacaaaaaatgacctatattac-agggggtaaagcaccattaaccc 33352672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 144
Target Start/End: Complemental strand, 5832399 - 5832340
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaacc 144  Q
    |||||||||||  |||||| |||||| ||||| ||||| ||||| ||||||||||||||||    
T  5832399 tattttacaggaagaaaattagaaataacctatattac-aggggataaagcactattaacc 5832340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 147
Target Start/End: Complemental strand, 11336716 - 11336652
Alignment:
Q  84 tattttacagggggaaaatcagaaa-tgacctaaattacaaggggttaaagcactattaacccta 147  Q
    |||||||||||| ||||| || ||| ||||||| ||||||||||| |||| ||| ||||||||||    
T  11336716 tattttacagggagaaaaacaaaaaatgacctatattacaagggggtaaaacaccattaacccta 11336652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 50
Target Start/End: Original strand, 18592253 - 18592289
Alignment:
Q  14 ggggtgaaatttttcatgaaggtccaaaaccaaaaaa 50  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  18592253 ggggtgaaattttccatgaaggtccaaaacaaaaaaa 18592289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 19325673 - 19325629
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggt 128  Q
    |||||||||||||||||| | ||||||| |||||||||| |||||    
T  19325673 tattttacagggggaaaaccggaaatgatctaaattacagggggt 19325629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 21604360 - 21604416
Alignment:
Q  93 gggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaa 149  Q
    |||||||||  | |||||||||| |||||| |||| |||||||| ||||||||||||    
T  21604360 gggggaaaacaaaaaatgacctatattacaggggggtaaagcaccattaaccctaaa 21604416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 149
Target Start/End: Original strand, 24062393 - 24062455
Alignment:
Q  85 attttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaa 149  Q
    |||||||||||| |||||||||||||||||| ||||| | ||| |||||  ||||||||||||||    
T  24062393 attttacagggg-aaaatcagaaatgacctatattac-atgggataaagacctattaaccctaaa 24062455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 52
Target Start/End: Original strand, 25070623 - 25070655
Alignment:
Q  20 aaatttttcatgaaggtccaaaaccaaaaaatc 52  Q
    |||||| ||||||||||||||||||||||||||    
T  25070623 aaatttatcatgaaggtccaaaaccaaaaaatc 25070655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 146
Target Start/End: Original strand, 31733281 - 31733345
Alignment:
Q  84 tattttacaggggg-aaaatcagaaatgacctaaattacaa-ggggttaaagcactattaaccct 146  Q
    |||||||||||||| |||| || |||||||||| ||||||| |||| |||||||| |||||||||    
T  31733281 tattttacaggggggaaaaccaaaaatgacctatattacaaggggggtaaagcaccattaaccct 31733345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 144
Target Start/End: Original strand, 31851989 - 31852049
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaacc 144  Q
    |||||||||||||||||| |  |||||||||| |||||| |||| |||||  |||||||||    
T  31851989 tattttacagggggaaaaccgaaaatgacctatattacaggggggtaaagacctattaacc 31852049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 34348825 - 34348761
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaa 148  Q
    ||||||||||| ||||||| | |||||||||| |||||| || | |||||||  |||||||||||    
T  34348825 tattttacaggaggaaaataaaaaatgacctatattacagggaggtaaagcatcattaaccctaa 34348761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 144
Target Start/End: Original strand, 34715905 - 34715960
Alignment:
Q  88 ttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaacc 144  Q
    |||||||||||||||| ||||| ||||| ||||| ||||| ||||| ||||||||||    
T  34715905 ttacagggggaaaatcggaaataacctatattac-agggggtaaagaactattaacc 34715960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 105; Significance: 1e-52; HSPs: 68)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 5642938 - 5643083
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||        ||||||||||||||||||    
T  5642938 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaatatcttcatattacaaggatgaaatttgaaaaaattattttacagggggaaa 5643037  T
Q  101 atcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    | |||||||||||||||||||| |||||||||||||||||||||||    
T  5643038 accagaaatgacctaaattacagggggttaaagcactattaaccct 5643083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 5644879 - 5645024
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||        ||||||||||||||||||    
T  5644879 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaatatcttcatattacaaggatgaaatttgaaaaaattattttacagggggaaa 5644978  T
Q  101 atcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    | |||||||||||||||||||| |||||||||||||||||||||||    
T  5644979 accagaaatgacctaaattacagggggttaaagcactattaaccct 5645024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 38711766 - 38711622
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacaggg-ggaa 99  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||       ||||||||||||  ||||    
T  38711766 tctcaaattacagggggtgaaattttt-atgaaggtccaaaaccaaaaaatcttcatattacaaggatgaaattcaaaaaaattattttacaggaaggaa 38711668  T
Q  100 aatcagaaatgacctaaattacaaggggttaaagcactattaaccc 145  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  38711667 aatcagaaatgacctaaattacagggggttaaagcactattaaccc 38711622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 2 - 145
Target Start/End: Original strand, 12478805 - 12478949
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttaca-gggggaaa 100  Q
    ||||||||||| || |||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||        ||||||||| ||||||||    
T  12478805 ctcaaattacagggagtgaaattttccatgaaggtccaaaaccaaaaaatcttcaaattacaaggatgaaattcaaaaaaaatattttacaggggggaaa 12478904  T
Q  101 atcagaaatgacctaaattacaaggggttaaagcactattaaccc 145  Q
    | | ||||||||||| |||||| |||| |||||||||||||||||    
T  12478905 accggaaatgacctatattacaggggggtaaagcactattaaccc 12478949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 151
Target Start/End: Complemental strand, 34845427 - 34845278
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagg-gggaaa 100  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||        ||||||||||| ||||||    
T  34845427 ctcaaattacagggggtgaaattttccatgaaggtccaaaaccaaaaaatcttcaaattacaaggatgaaattcaaaaaaaatattttacaggagggaaa 34845328  T
Q  101 atcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaat 151  Q
    | | |||||| |||| ||||| ||||| ||||||||||||||||| |||||    
T  34845327 accggaaatggcctatattac-aggggctaaagcactattaacccaaaaat 34845278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 146
Target Start/End: Original strand, 11830407 - 11830552
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttaca-gggggaaa 100  Q
    ||||||||||| || |||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||        ||||||||| ||||||||    
T  11830407 ctcaaattacagggagtgaaattttccatgaaggtccaaaaccaaaaaatcttcaaattacaaggatgaaattcaaaaaaaatattttacaggggggaaa 11830506  T
Q  101 atcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    | | ||||||||||| |||||| |||| |||| |||||||||||||    
T  11830507 accggaaatgacctatattacaggggggtaaaacactattaaccct 11830552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 146
Target Start/End: Complemental strand, 38703742 - 38703599
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaaa 101  Q
    ||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||  ||| || ||||||||||        ||||||||||||||||||    
T  38703742 ctcaaattaca-ggggtgaaattttccatgaaggtctaaaaccaaaaaatcttcaagttaaaaggatgaaattcaaaaaaagtattttacagggggaaaa 38703644  T
Q  102 tcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
     | ||||||||||| | |||| |||||||||||||||||||||||    
T  38703643 ccggaaatgacctataatacagggggttaaagcactattaaccct 38703599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 146
Target Start/End: Original strand, 13558773 - 13558918
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacaggggg-aaa 100  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||        |||||||||||||| |||    
T  13558773 ctcaaattacagggggtaaaattttccatgaaggtccaaaaccaaaaaatcttcaaattacaaggatgaaattcagaaaaactattttacagggggaaaa 13558872  T
Q  101 atcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    | |||||||||| || |||||| ||| |||||  ||||||||||||    
T  13558873 accagaaatgacttatattacaggggattaaaagactattaaccct 13558918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 36637224 - 36637368
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaa 100  Q
    |||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||  | |||||||        ||||||||| ||| |||    
T  36637224 tctcaaattataagggatgaaatttttcatgaaggtccaaaatcaaaaaatcttcatattacaagaaagaaattcaaaaaaaatattttaca-gggaaaa 36637322  T
Q  101 atcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    ||  ||||||| |||||||||| |||| |||| |||||||||||||    
T  36637323 atgggaaatgatctaaattacagggggataaaacactattaaccct 36637368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 145
Target Start/End: Complemental strand, 32684705 - 32684561
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttaca-gggggaaa 100  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||        ||||||||| ||||||||    
T  32684705 ctcaaattacagggggtaaaattttccatgaaggtccaaaaccaaaaaatcttcaaattacaaggatgaaattcaaaaaaactattttacaggggggaaa 32684606  T
Q  101 atcagaaatgacctaaattacaaggggttaaagcactattaaccc 145  Q
    | | |||||||| || |||||| |||| ||||  |||||||||||    
T  32684605 accggaaatgacttatattacaggggggtaaaagactattaaccc 32684561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 11312523 - 11312450
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    ||||||| ||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  11312523 ctcaaataacatggggtgaaatttttcatgaaggtccaaaactaaaaaatcttcaaattacaatgatgaaattc 11312450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 157
Target Start/End: Original strand, 34227559 - 34227716
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc-nnnnnnnttattttacagg-gggaa 99  Q
    ||||||||||| || |||||||||||  ||||||||||||||||||||||||||| ||||||| ||||||||||         |||||||||||  | ||    
T  34227559 ctcaaattacagggagtgaaattttttctgaaggtccaaaaccaaaaaatcttcaaattacaaggatgaaattcaaaaaaaaatattttacaggatgcaa 34227658  T
Q  100 aatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaatgtatat 157  Q
    || ||||||||||||| ||||||||||  ||||||||| ||||||||| ||| |||||    
T  34227659 aaccagaaatgacctatattacaagggaataaagcactcttaaccctataatttatat 34227716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 148
Target Start/End: Original strand, 2873681 - 2873825
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaaa 101  Q
    ||||||||||| ||| | ||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||        ||||||||||| ||||||    
T  2873681 ctcaaattaca-gggataaaatttttcttgaaggtccaaaaccaaaaaatcttcaaattacaaggatgaaattcaaaaaatatattttacaggaggaaaa 2873779  T
Q  102 tcagaaatgacctaaattacaaggggttaaagcactattaaccctaa 148  Q
     |  ||||||| || ||||| ||||| |||| |||||||||||||||    
T  2873780 ccgaaaatgacttatattac-agggggtaaaacactattaaccctaa 2873825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 9305551 - 9305478
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaatt 74  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||| ||||||| |||||||||    
T  9305551 tctcaaattacagggggtgaaattttccatgaaggtccaaaaccaaaaaatcatcaaattacaaggatgaaatt 9305478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 9662337 - 9662264
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    ||||||||||||||   |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  9662337 ctcaaattacaaggaacgaaatttttcatgaaggtccaaaaccaaaaaatcttcaaattacaaggatgaaattc 9662264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 23389252 - 23389325
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||    
T  23389252 ctcaaattacagcgggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcaaattataaggatgaaattc 23389325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 41509523 - 41509450
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  41509523 ctcaaattacagggggtaaaattttccatgaaggtccaaaaccaaaaaatcttcaaattacaaggatgaaattc 41509450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 35839585 - 35839657
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaatt 74  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||| ||| |||||||||    
T  35839585 ctcaaattacagggggtgaaattttccatgaaggtccaaaaccaaaaaatcttcaaatttcaaggatgaaatt 35839657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 13572771 - 13572917
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaa 100  Q
    ||||||||||||||||| |||||||| |||||||||| |||||||||||||||||| ||||||| || |||| |          ||||||||||| ||||    
T  13572771 tctcaaattacaaggggcgaaattttccatgaaggtctaaaaccaaaaaatcttcaaattacaaggacgaaaattaaacaaaaaattttacagggtgaaa 13572870  T
Q  101 atcag-aaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    | | | ||||||| || |||||| |||| ||||||||||||||||||    
T  13572871 aaccgaaaatgacatatattacaggggggtaaagcactattaaccct 13572917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 2 - 146
Target Start/End: Complemental strand, 25653848 - 25653703
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc-nnnnnnnttattttaca-gggggaa 99  Q
    ||||||||||| || | |||||||| ||||||||||||||| ||||||||||||| ||||||| ||||||||||         ||||||||| |||||||    
T  25653848 ctcaaattacagggagcgaaattttccatgaaggtccaaaatcaaaaaatcttcaaattacaaggatgaaattcaaaaaaaactattttacaggggggaa 25653749  T
Q  100 aatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    || || |||||||||| ||||| ||||| |||| |||||||||||||    
T  25653748 aaccaaaaatgacctatattac-agggggtaaaacactattaaccct 25653703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 5566627 - 5566564
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaa 64  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||||| |||| |||||||    
T  5566627 tctcaaattacaaggggcgaaattttccatgaaggtccaaaaccaaaaaatattcaaattacaa 5566564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 30222020 - 30222146
Alignment:
Q  20 aaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaaatcagaaatgacctaaatt 119  Q
    |||||||||||||||| | |||||||||||||||||| ||||||| || | ||| |        |||||||||||||||||| |  |||||||||| |||    
T  30222020 aaatttttcatgaaggcctaaaaccaaaaaatcttcaaattacaaggacggaatccaaaaaaaatattttacagggggaaaaccgaaaatgacctatatt 30222119  T
Q  120 acaaggggttaaagcactattaacccta 147  Q
    || ||||| |||||||||||||||||||    
T  30222120 ac-agggggtaaagcactattaacccta 30222146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 35990723 - 35990649
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatc-ttcatattacaatgatgaaatt 74  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||| |||||||  ||||||||    
T  35990723 tctcaaattacaaggagtgaaattttccatgaaggtccaaaaccaaaaaatctttcaaattacaagcatgaaatt 35990649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 147
Target Start/End: Complemental strand, 11830294 - 11830173
Alignment:
Q  26 ttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacaggggg-aaaatcagaaatgacctaaattacaag 124  Q
    |||||||||||||||||||||||| || ||| ||||||| || |||||||        |||||||||||||| |||||| ||||||||||| |||||| |    
T  11830294 ttcatgaaggtccaaaaccaaaaa-tcatcaaattacaaggacgaaattcaaaaaatatattttacagggggtaaaatcggaaatgacctatattacagg 11830196  T
Q  125 gggttaaagcactattaacccta 147  Q
    ||| |||| ||||||||||||||    
T  11830195 ggggtaaaacactattaacccta 11830173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 15935529 - 15935456
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    ||||||||||| ||| |||||||||  |||||||||||||||||||||||||||| || |||| ||||||||||    
T  15935529 ctcaaattacaggggatgaaattttctatgaaggtccaaaaccaaaaaatcttcaaatgacaaggatgaaattc 15935456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 31974801 - 31974728
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    ||||||||| | || |||||||||| ||||||||||||||||||||||||||| | ||||||| ||||||||||    
T  31974801 ctcaaattatagggagtgaaattttccatgaaggtccaaaaccaaaaaatctttaaattacaaggatgaaattc 31974728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 32393511 - 32393584
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    |||||||||||  | |||||||||||||||||| ||||||||||||||||||||| ||||||| ||| ||||||    
T  32393511 ctcaaattacagtgcgtgaaatttttcatgaagatccaaaaccaaaaaatcttcaaattacaaggataaaattc 32393584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 26 - 146
Target Start/End: Original strand, 32684819 - 32684939
Alignment:
Q  26 ttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacaggggg-aaaatcagaaatgacctaaattacaag 124  Q
    |||||||||||||||||||||||| |||||| ||||||| || ||||| |        |||||||||||||| |||| | |||||||||||||||||| |    
T  32684819 ttcatgaaggtccaaaaccaaaaa-tcttcaaattacaaggacgaaatccaaaaaatatattttacagggggtaaaaccggaaatgacctaaattacagg 32684917  T
Q  125 gggttaaagcactattaaccct 146  Q
    ||| |||| |||||||||||||    
T  32684918 ggggtaaaacactattaaccct 32684939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 10761655 - 10761725
Alignment:
Q  3 tcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaatt 74  Q
    |||||||||| || |||||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  10761655 tcaaattacagggagtgaaatttt-catgaaggtccaaaatcaaaaaatcttcaaattacaaggatgaaatt 10761725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 156
Target Start/End: Original strand, 41509638 - 41509768
Alignment:
Q  26 ttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacaggggg-aaaatcagaaatgacctaaattacaag 124  Q
    |||||||||||||||||||||||| |||||| ||||||| || ||||| |        |||||||||||||| |||| | ||||||||||| |||||| |    
T  41509638 ttcatgaaggtccaaaaccaaaaa-tcttcaaattacaaggacgaaatccaaaaaatatattttacagggggtaaaaccggaaatgacctatattacagg 41509736  T
Q  125 gggttaaagcactattaaccctaaaatgtata 156  Q
    ||| |||| ||||||||| ||||| |||||||    
T  41509737 ggggtaaaacactattaatcctaacatgtata 41509768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 18029830 - 18029874
Alignment:
Q  20 aaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaa 64  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  18029830 aaatttttcatgaaggtctaaaaccaaaaaatcttcatattacaa 18029874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 27637213 - 27637150
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaa 64  Q
    ||||||||||||||||| ||||||||  ||||||||||||||||||||||| || | |||||||    
T  27637213 tctcaaattacaaggggcgaaattttcgatgaaggtccaaaaccaaaaaatattaaaattacaa 27637150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 27637384 - 27637450
Alignment:
Q  86 ttttacaggg-ggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaat 151  Q
    |||||||||| |||||| |  |||||||||| |||||| ||||||||||||||||||||||||||||    
T  27637384 ttttacagggtggaaaaccgaaaatgacctatattacagggggttaaagcactattaaccctaaaat 27637450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 33958778 - 33958824
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaa 48  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||    
T  33958778 ctcaaattacaagcggtgaaatttttcatgaagatccaaaaccaaaa 33958824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 8626744 - 8626816
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaatt 74  Q
    |||||||||||| || | |||||||| ||||||| |||||||||||||||| |||| ||||||| |||||||||    
T  8626744 tctcaaattacagggagcgaaattttccatgaagatccaaaaccaaaaaat-ttcaaattacaaggatgaaatt 8626816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 11105831 - 11105770
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccc 145  Q
    |||||||||||||||||| || |||||||||| |||||| |||| |||||||| ||||||||    
T  11105831 tattttacagggggaaaaccaaaaatgacctatattacagggggataaagcaccattaaccc 11105770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 150
Target Start/End: Original strand, 25653960 - 25654085
Alignment:
Q  26 ttcatgaagg-tccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacaggggg-aaaatcagaaatgacctaaattacaa 123  Q
    |||||||||| |||||||||||||| || ||| ||||||| || |||||||        |||||||||||||| |||| | ||||||||||| ||||||     
T  25653960 ttcatgaagggtccaaaaccaaaaa-tcatcaaattacaaggacgaaattcaaaaaatatattttacagggggtaaaaccggaaatgacctatattacat 25654058  T
Q  124 ggggttaaagcactattaaccctaaaa 150  Q
    ||||||||| |||||||||||| ||||    
T  25654059 ggggttaaaacactattaacccaaaaa 25654085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 146
Target Start/End: Complemental strand, 12478692 - 12478572
Alignment:
Q  26 ttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacaggggg-aaaatcagaaatgacctaaattacaag 124  Q
    |||||||||||||||||||||||| || ||| ||||||| || ||||| |        |||||||||||||| |||| | ||||||||||| |||||| |    
T  12478692 ttcatgaaggtccaaaaccaaaaa-tcatcaaattacaaggacgaaatccaaaaaaaatattttacagggggtaaaaccggaaatgacctatattacagg 12478594  T
Q  125 gggttaaagcactattaaccct 146  Q
    ||| |||| |||||||||||||    
T  12478593 ggggtaaaacactattaaccct 12478572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 12936310 - 12936251
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatatta 61  Q
    ||||||||||| ||||  |||||||| ||||||||| |||||||||||||||||| ||||    
T  12936310 ctcaaattacagggggcaaaatttttgatgaaggtctaaaaccaaaaaatcttcaaatta 12936251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 13175102 - 13175153
Alignment:
Q  13 aggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaa 64  Q
    ||||| ||||||| ||||||||||||||||| |||||||||||| |||||||    
T  13175102 aggggcgaaatttgtcatgaaggtccaaaacaaaaaaatcttcaaattacaa 13175153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 29346239 - 29346309
Alignment:
Q  3 tcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaatt 74  Q
    |||||||||| ||| ||||||||| ||||||||||||||| ||||| ||||||| |||| || |||||||||    
T  29346239 tcaaattacaggggttgaaattttccatgaaggtccaaaa-caaaatatcttcaaattataaggatgaaatt 29346309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 151
Target Start/End: Complemental strand, 21692459 - 21692390
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattaca--aggggttaaagcactattaaccctaaaat 151  Q
    |||||||||||||||||| || |||||||||| ||||||   |||| |||||||| ||||||||||||||    
T  21692459 tattttacagggggaaaaccaaaaatgacctatattacaggggggggtaaagcaccattaaccctaaaat 21692390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 150
Target Start/End: Original strand, 34985319 - 34985384
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaa 150  Q
    |||||||||||| ||||| ||||||||||||| ||||| ||||| |||||  |||||||||||||||    
T  34985319 tattttacagggcgaaaaccagaaatgacctatattac-agggggtaaagacctattaaccctaaaa 34985384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 24768738 - 24768811
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    ||||||||||| || |||||||||| | | ||||||||||||  ||||| ||||| ||||||| ||||||||||    
T  24768738 ctcaaattacagggcgtgaaattttccgtaaaggtccaaaacacaaaaaacttcaaattacaaggatgaaattc 24768811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 37545148 - 37545196
Alignment:
Q  26 ttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    ||||||||||||||||||| ||||||||||| |||||||||| |||||||    
T  37545148 ttcatgaaggtccaaaacc-aaaaatcttcaaattacaatgacgaaattc 37545196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 148
Target Start/End: Original strand, 11105946 - 11106010
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaa 148  Q
    ||||||||||||| ||||  | |||||||||| |||||| |||| |||||||| |||||||||||    
T  11105946 tattttacaggggaaaaacaaaaaatgacctatattacaggggggtaaagcaccattaaccctaa 11106010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 147
Target Start/End: Complemental strand, 11424162 - 11424110
Alignment:
Q  95 gggaaaatcagaaatgacctaaattacaaggggttaaagcactattaacccta 147  Q
    |||||||| | |||||||||| ||||||||||| |||||||| ||||||||||    
T  11424162 gggaaaataaaaaatgacctatattacaagggggtaaagcaccattaacccta 11424110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 151
Target Start/End: Original strand, 18367256 - 18367324
Alignment:
Q  84 tattttacagggg-gaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaat 151  Q
    ||||||||||||| ||||| | ||||||||||| |||||| |||| ||||||||  |||||||||||||    
T  18367256 tattttacaggggagaaaaccggaaatgacctatattacaggggggtaaagcacctttaaccctaaaat 18367324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 29212106 - 29212162
Alignment:
Q  8 ttacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaa 64  Q
    ||||| |||| ||||||| |||||| | ||||||||||||||||||||| |||||||    
T  29212106 ttacagggggcgaaatttgtcatgaggatccaaaaccaaaaaatcttcaaattacaa 29212162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 142
Target Start/End: Original strand, 4352540 - 4352599
Alignment:
Q  84 tattttacagg-gggaaaatcagaaatgacctaaattacaaggggttaaagcactattaa 142  Q
    ||||||||||| |||||||  | |||||||||| |||||||||||||||||||| |||||    
T  4352540 tattttacaggagggaaaactaaaaatgacctatattacaaggggttaaagcaccattaa 4352599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 147
Target Start/End: Original strand, 11272854 - 11272917
Alignment:
Q  85 attttacaggggg-aaaatcagaaatgacctaaattacaaggggttaaagcactattaacccta 147  Q
    ||||||||||||| |||| | ||||| ||||| ||||||||| | |||||||||||||||||||    
T  11272854 attttacaggggggaaaaccggaaataacctatattacaaggaggtaaagcactattaacccta 11272917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 146
Target Start/End: Original strand, 21692605 - 21692663
Alignment:
Q  87 tttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    ||||||||||||||| || |||||||||| ||||| ||||| |||||||| |||||||||    
T  21692605 tttacagggggaaaaccaaaaatgacctatattac-agggggtaaagcaccattaaccct 21692663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 29346123 - 29346077
Alignment:
Q  26 ttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaat 73  Q
    |||||||||||||||||||| |||||||||| |||||||||| |||||    
T  29346123 ttcatgaaggtccaaaacca-aaaatcttcaaattacaatgacgaaat 29346077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 1552797 - 1552731
Alignment:
Q  85 attttacagggg-gaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaa 150  Q
    |||||| ||||| ||||||||||||||||||| |||||| |||   ||| |||||||||||||||||    
T  1552797 attttataggggcgaaaatcagaaatgacctatattacaggggtgaaaaacactattaaccctaaaa 1552731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 149
Target Start/End: Complemental strand, 1989553 - 1989487
Alignment:
Q  83 ttattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaa 149  Q
    |||||||| | |||| |||||  |||||||||| |||| |||||| |||| ||||||||||||||||    
T  1989553 ttattttataagggggaaatcgaaaatgacctatattataagggggtaaaacactattaaccctaaa 1989487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 150
Target Start/End: Complemental strand, 3912317 - 3912251
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaa 150  Q
    |||||||||||||||||| | ||||||||||| |||||| |||| |||||  || ||||||| ||||    
T  3912317 tattttacagggggaaaaccggaaatgacctatattacaggggggtaaagacctgttaacccaaaaa 3912251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 146
Target Start/End: Original strand, 5566798 - 5566860
Alignment:
Q  85 attttacaggg-ggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    ||||||||||| |||||| |  |||||||||| ||||||  ||||||||||||||||||||||    
T  5566798 attttacagggtggaaaaccgaaaatgacctatattacagagggttaaagcactattaaccct 5566860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 146
Target Start/End: Complemental strand, 27543472 - 27543410
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    |||||||||||||||||| |  |||||||||| |||||| |||| |||||  |||||||||||    
T  27543472 tattttacagggggaaaaccgaaaatgacctatattacaggggggtaaagacctattaaccct 27543410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 5160353 - 5160292
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccc 145  Q
    |||||||||||||| ||| || |||||||||| |||||| |||| |||| ||| ||||||||    
T  5160353 tattttacaggggggaaaccaaaaatgacctatattacaggggggtaaaacaccattaaccc 5160292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 148
Target Start/End: Original strand, 5160495 - 5160560
Alignment:
Q  84 tattttacagggggaaaatcagaaa-tgacctaaattacaaggggttaaagcactattaaccctaa 148  Q
    |||||||||||||| ||| || ||| ||||||| |||||| |||| |||||||| |||||||||||    
T  5160495 tattttacaggggggaaaacaaaaaatgacctatattacaggggggtaaagcaccattaaccctaa 5160560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 5873745 - 5873685
Alignment:
Q  86 ttttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaacccta 147  Q
    |||||||||||||||| || || ||||||| ||| || ||||||||||| ||||||||||||    
T  5873745 ttttacagggggaaaaccaaaagtgacctatattgca-ggggttaaagccctattaacccta 5873685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 150
Target Start/End: Original strand, 17818092 - 17818137
Alignment:
Q  105 gaaatgacctaaattacaaggggttaaagcactattaaccctaaaa 150  Q
    ||||||||||| |||||| |||| |||| |||||||||||||||||    
T  17818092 gaaatgacctatattacagggggataaaacactattaaccctaaaa 17818137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 146
Target Start/End: Complemental strand, 30221831 - 30221770
Alignment:
Q  85 attttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    ||||||||||||| ||| | |||||| |||| |||||| |||  ||||||||||||||||||    
T  30221831 attttacaggggggaaagcggaaatgtcctatattacaggggagtaaagcactattaaccct 30221770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 136
Target Start/End: Original strand, 35839672 - 35839721
Alignment:
Q  87 tttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcac 136  Q
    ||||||||||||||||  ||||||||||| ||||||||||  ||||||||    
T  35839672 tttacagggggaaaattggaaatgacctatattacaagggagtaaagcac 35839721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 147
Target Start/End: Complemental strand, 22686804 - 22686741
Alignment:
Q  84 tattttacagggggaaaatc-agaaatgacctaaattacaaggggttaaagcactattaacccta 147  Q
    |||||||||||||||||| | | |||||||||| ||||| ||||| |||||||| ||||||||||    
T  22686804 tattttacagggggaaaaacaaaaaatgacctatattac-agggggtaaagcaccattaacccta 22686741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 149
Target Start/End: Complemental strand, 27637128 - 27637064
Alignment:
Q  86 ttttacaggg-ggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaa 149  Q
    |||||||||| |||||||| |||||||| || |||||| | || |||| ||||||||||||||||    
T  27637128 ttttacagggtggaaaatcggaaatgacatatattacaggcggataaaacactattaaccctaaa 27637064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 33640988 - 33640944
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggt 128  Q
    ||||||||| ||||||||||||||||||| || |||||| |||||    
T  33640988 tattttacatggggaaaatcagaaatgacatatattacagggggt 33640944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 149
Target Start/End: Complemental strand, 36343204 - 36343142
Alignment:
Q  85 attttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaa 149  Q
    |||||||||||||||| || ||||||| ||| |||||| ||||| ||| ||||||||||||||||    
T  36343204 attttacagggggaaa-tcggaaatgatctatattacagggggtaaaa-cactattaaccctaaa 36343142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 101; Significance: 3e-50; HSPs: 64)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 21040094 - 21040235
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaa 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||| |||    
T  21040094 tctcaaattacatggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcaaaaaaattattttacaggggaaaa 21040193  T
Q  101 atcagaaatgacctaaattacaaggggttaaagcactattaa 142  Q
    | || ||||||||||||||||| |||||||||||||||||||    
T  21040194 accaaaaatgacctaaattacagggggttaaagcactattaa 21040235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 16920571 - 16920714
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaa 100  Q
    |||||||||||| ||||||||||||| |||||||||| |||||||||||||||||| ||||||| ||||||||||        |||||||||||||||||    
T  16920571 tctcaaattaca-ggggtgaaattttccatgaaggtctaaaaccaaaaaatcttcaaattacaaagatgaaattcaaaaaaaatattttacagggggaaa 16920669  T
Q  101 atcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    | ||||||||| ||| ||||| ||||| ||||||||||||||||||    
T  16920670 accagaaatgatctatattac-agggggtaaagcactattaaccct 16920714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 2 - 145
Target Start/End: Original strand, 26243332 - 26243476
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggg-gaaa 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||| |||||||||         ||||||||||||| ||||    
T  26243332 ctcaaattacaaggggtgaaattttccatgaaggtccaaaaccaaaaaatcttcaaatttcaaggatgaaattaaaaaaaaatattttacaggggcgaaa 26243431  T
Q  101 atcagaaatgacctaaattacaaggggttaaagcactattaaccc 145  Q
    | | ||||||||||| |||||| |||| |||||||||||||||||    
T  26243432 accggaaatgacctatattacagggggataaagcactattaaccc 26243476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 146
Target Start/End: Original strand, 11721498 - 11721642
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttaca-gggggaaa 100  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||        ||||||||| ||||||||    
T  11721498 ctcaaattacagggggtaaaattttccatgaaggtccaaaaccaaaaaatcttcaaattacaaggatgaaattcaaaaaaactattttacaggggggaaa 11721597  T
Q  101 atcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    |   |||||||| || |||||||||||| |||| ||||||||||||    
T  11721598 actggaaatgacttatattacaaggggtaaaag-actattaaccct 11721642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 145
Target Start/End: Complemental strand, 12148052 - 12147908
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttac-agggggaaa 100  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||  ||||||||         |||||||| ||||| |||    
T  12148052 ctcaaattacaaggggtgaaattttctatgaaggtccaaaaccaaaaaatcttcaaattacaagaatgaaattaaaaaaaaatattttacaaggggtaaa 12147953  T
Q  101 atcagaaatgacctaaattacaaggggttaaagcactattaaccc 145  Q
    | ||||||||||||| |||||| || | |||| ||||||||||||    
T  12147952 accagaaatgacctatattacagggtggtaaaacactattaaccc 12147908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 4561747 - 4561603
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacaggggga-a 99  Q
    |||||||||||| ||||||||||||| || |||||||||||| ||||||||||||| ||||||| ||||||| ||        ||||||||||||||| |    
T  4561747 tctcaaattacagggggtgaaattttccaagaaggtccaaaatcaaaaaatcttcaaattacaaggatgaaagtcaaaagaaatattttacagggggata 4561648  T
Q  100 aatcagaaatgacctaaattacaaggggttaaagcactattaaccc 145  Q
    || | ||||||||||| ||||| ||| | |||||||||||||||||    
T  4561647 aaccggaaatgacctatattac-aggaggtaaagcactattaaccc 4561603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 146
Target Start/End: Complemental strand, 37217449 - 37217307
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaaa 101  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||| ||| |||||||||          |  ||||||||||||||    
T  37217449 ctcaaattacagggggtgaaattttccatgaaggtccaaaaccaaaaaatcttcaaatttcaaggatgaaattaaaaaaaa--aaattacagggggaaaa 37217352  T
Q  102 tcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    |||||||| || || |||||| || | ||||||||||||||||||    
T  37217351 tcagaaataacttatattacagggtggtaaagcactattaaccct 37217307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 28796546 - 28796620
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||| ||||||| ||||||||||    
T  28796546 tctcaaattacaaggtgtgaaattttccatgaaggtccaaaaccaaaatatcttcaaattacaaagatgaaattc 28796620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 41123287 - 41123214
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  41123287 ctcaaattacagggggtaaaattttccatgaaggtccaaaaccaaaaaatcttcaaattacaaggatgaaattc 41123214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 30916714 - 30916786
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaatt 74  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||||||||||| ||||||| |||||||||    
T  30916714 ctcaaattacagggggtgaaattttccacgaaggtccaaaaccaaaaaatcttcaaattacaaggatgaaatt 30916786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 146
Target Start/End: Original strand, 6117815 - 6117959
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaaa 101  Q
    ||||||||||| || |||||||||| |||||||||||||| | |||||||||| | ||||||| ||||||||||         | |||||||||||||||    
T  6117815 ctcaaattacagggagtgaaattttccatgaaggtccaaatctaaaaaatcttaaaattacaaggatgaaattcaaaaaaaaaaatttacagggggaaaa 6117914  T
Q  102 tcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
     | ||||||||||| |||||| || | |||| |||||||||||||    
T  6117915 ccggaaatgacctatattacatggaggtaaaacactattaaccct 6117959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 8861349 - 8861277
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaatt 74  Q
    ||||||||||| |||||||||||||  || ||||||||||||||||||||||||| ||||||| |||||||||    
T  8861349 ctcaaattacagggggtgaaattttctattaaggtccaaaaccaaaaaatcttcaaattacaaggatgaaatt 8861277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 23159666 - 23159738
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaatt 74  Q
    ||||| ||||| ||| ||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||    
T  23159666 ctcaatttacaggggatgaaattttccatgaaggtccaaaaccaaaaaatcttcaaattacaaggatgaaatt 23159738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 31312629 - 31312492
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaaa 101  Q
    ||||||||||| ||||||||||||| | ||||||||||||||||||||| ||||| ||||||| ||||||| ||        ||||||| ||||| ||||    
T  31312629 ctcaaattacagggggtgaaattttccgtgaaggtccaaaaccaaaaaaccttcaaattacaaggatgaaagtcaaaacaaatattttataggggaaaaa 31312530  T
Q  102 tcagaaatgacctaaattacaaggggttaaagcactat 139  Q
     || |||||||||| |||||| |||  || ||||||||    
T  31312529 ccaaaaatgacctatattacaggggcgtatagcactat 31312492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 17885846 - 17885783
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaa 64  Q
    ||||||||||||||||| |||||||| |||||||||| |||||||||||||||||| |||||||    
T  17885846 tctcaaattacaaggggcgaaattttccatgaaggtctaaaaccaaaaaatcttcaaattacaa 17885783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 29691192 - 29691262
Alignment:
Q  3 tcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaatt 74  Q
    |||||||||| || |||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||    
T  29691192 tcaaattacagggagtgaaatttt-catgaaggtccaaaaccaaaaaatcttcaaattacaaggatgaaatt 29691262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 144
Target Start/End: Complemental strand, 38874481 - 38874339
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacag-ggggaaa 100  Q
    ||||||||||| |  |||||||||| ||||||||||||||||||||||||||||| ||||||| ||| ||||||        |||||||||| || ||||    
T  38874481 ctcaaattacaggaagtgaaattttccatgaaggtccaaaaccaaaaaatcttcaaattacaaggataaaattcaaaaaaaatattttacagaggtgaaa 38874382  T
Q  101 atcagaaatgacctaaattacaaggggttaaagcactattaacc 144  Q
    | |  |||| ||||||||||| ||||| |||| |||||||||||    
T  38874381 accgaaaataacctaaattac-agggggtaaaacactattaacc 38874339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 10819527 - 10819454
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    |||||| |||| ||||||||||||| |||||||||| |||| ||||||||||||| ||||||| ||||||||||    
T  10819527 ctcaaaatacagggggtgaaattttccatgaaggtctaaaatcaaaaaatcttcaaattacaaagatgaaattc 10819454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 22756207 - 22756134
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    ||||||||||| ||||| |||| || |||||||||||||||| |||||||||||| ||||||| ||||||||||    
T  22756207 ctcaaattacagggggtaaaatgttccatgaaggtccaaaacaaaaaaatcttcaaattacaaggatgaaattc 22756134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 23188772 - 23188699
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    ||||||||||||||||||||||||| ||||||||||  |||| |||||||||||| ||| ||| ||||||||||    
T  23188772 ctcaaattacaaggggtgaaattttccatgaaggtcagaaacaaaaaaatcttcaaattccaaggatgaaattc 23188699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 25233771 - 25233626
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacaggg-ggaa 99  Q
    ||||||||||||||||| |||||||| |||||||||||||||||| |||||||||| ||||||| || ||||  |          |||||||||| ||||    
T  25233771 tctcaaattacaaggggcgaaattttccatgaaggtccaaaacca-aaaatcttcaaattacaaggacgaaaaccaaattaaaatttttacagggtggaa 25233673  T
Q  100 aatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    || |  |||||||||| |||||  |||||||||||||||||||||||    
T  25233672 aaccgaaaatgacctatattacggggggttaaagcactattaaccct 25233626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 25297931 - 25297786
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacaggg-ggaa 99  Q
    ||||||||||||||||| |||||||| |||||||||||||||||| |||||||||| ||||||| || ||||  |          |||||||||| ||||    
T  25297931 tctcaaattacaaggggcgaaattttccatgaaggtccaaaacca-aaaatcttcaaattacaaggacgaaaaccaaattaaaatttttacagggtggaa 25297833  T
Q  100 aatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    || |  |||||||||| |||||  |||||||||||||||||||||||    
T  25297832 aaccgaaaatgacctatattacggggggttaaagcactattaaccct 25297786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 42097802 - 42097730
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    |||||||||||||  |||||||||| |||||||||||||||||| |||||||||| ||||||| ||||||||||    
T  42097802 ctcaaattacaagaagtgaaattttccatgaaggtccaaaacca-aaaatcttcaaattacaaggatgaaattc 42097730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 146
Target Start/End: Original strand, 25963034 - 25963179
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaacc-aaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacaggggg-aa 99  Q
    ||||||| ||| ||| ||||||||| ||||||||||||||||| |||||||||| | ||| ||| ||| ||||||        |||||||||||||| ||    
T  25963034 ctcaaatcacaggggatgaaattttccatgaaggtccaaaaccaaaaaaatctttaaatttcaaggataaaattcaaaaaaaatattttacagggggtaa 25963133  T
Q  100 aatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    |  | ||||||||||| ||||| ||||| ||||||||||||||||||    
T  25963134 acccggaaatgacctatattac-aggggataaagcactattaaccct 25963179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 148
Target Start/End: Complemental strand, 29691079 - 29690959
Alignment:
Q  26 ttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaaatcagaaatgacctaaattacaagg 125  Q
    |||||||||||||||||| ||||||||||||  ||||||||| ||||| |        ||||||||||||| |||| |  |||||||||| |||||||||    
T  29691079 ttcatgaaggtccaaaac-aaaaaatcttcaacttacaatgacgaaatccaaaaaatatattttacaggggtaaaaccgaaaatgacctatattacaagg 29690981  T
Q  126 ggttaaagcactattaaccctaa 148  Q
    ||| ||| |||||||||||||||    
T  29690980 ggtgaaa-cactattaaccctaa 29690959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 150
Target Start/End: Complemental strand, 8855516 - 8855392
Alignment:
Q  26 ttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaaatcagaaatgacctaaattacaagg 125  Q
    ||||||||||||||||||||||||| ||||| ||||||| |||| ||| |         ||||||| ||||||||| |||||||| |||| |||||| ||    
T  8855516 ttcatgaaggtccaaaaccaaaaaa-cttcaaattacaaggatggaatccaaaaagaaaattttactgggggaaaaccagaaatggcctatattacaggg 8855418  T
Q  126 ggt-taaagcactattaaccctaaaa 150  Q
    ||  ||||||||||||||||||||||    
T  8855417 ggggtaaagcactattaaccctaaaa 8855392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 25088692 - 25088629
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaa 64  Q
    |||||||| |||||||| |||||||  ||||||||||||||||||||||||||| | |||||||    
T  25088692 tctcaaatgacaaggggcgaaatttgccatgaaggtccaaaaccaaaaaatcttaaaattacaa 25088629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 25146661 - 25146598
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaa 64  Q
    |||||||| |||||||| |||||||  ||||||||||||||||||||||||||| | |||||||    
T  25146661 tctcaaatgacaaggggcgaaatttgccatgaaggtccaaaaccaaaaaatcttaaaattacaa 25146598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 145
Target Start/End: Complemental strand, 41254266 - 41254123
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnt-tattttacagggggaaa 100  Q
    ||||||||| | ||||  ||||||||| |||||||| |||||||||||||||||| ||||||| |||| ||| |       | ||||||||||| |||||    
T  41254266 ctcaaattatagggggcaaaatttttcgtgaaggtctaaaaccaaaaaatcttcaaattacaaggatggaatccaaaaaaatatattttacaggaggaaa 41254167  T
Q  101 atcagaaatgacctaaattacaaggggttaaagcactattaaccc 145  Q
    |  | ||||||| || ||||||||| | |||||||||||||||||    
T  41254166 actaaaaatgacttacattacaaggag-taaagcactattaaccc 41254123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 41959064 - 41959127
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaa 64  Q
    |||||||| |||||||| |||||||  |||||||||||||||||||||| |||||| |||||||    
T  41959064 tctcaaatgacaaggggcgaaatttgccatgaaggtccaaaaccaaaaattcttcaaattacaa 41959127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 7577899 - 7577825
Alignment:
Q  2 ctcaaatta-caaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    ||||||||| || ||||||||||||| ||||||| ||||||||||||||||||||| |||| ||  |||||||||    
T  7577899 ctcaaattaacagggggtgaaattttccatgaagatccaaaaccaaaaaatcttcaaattataagaatgaaattc 7577825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 146
Target Start/End: Original strand, 8855614 - 8855740
Alignment:
Q  20 aaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttac-agggggaaaatcagaaatgacctaaat 118  Q
    |||||||||||||||||  |||||||||||||||||| ||||||| || ||||| |        |||||||| |||||||||||| |||||||| || ||    
T  8855614 aaatttttcatgaaggtgtaaaaccaaaaaatcttcaaattacaaggacgaaatccaaaaaaaatattttacaagggggaaaatcggaaatgacttatat 8855713  T
Q  119 tacaaggggttaaagcactattaaccct 146  Q
    ||| ||| | |||| |||||||||||||    
T  8855714 tac-aggaggtaaaacactattaaccct 8855740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 31920258 - 31920404
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaat-cttcatattacaatgatgaaattcnnnnnnnttattttacagggggaa 99  Q
    |||||||||||| ||||  |||||||||| ||||||| |||   ||||||| ||||| |||| || || |||||||        ||||||||||||||||    
T  31920258 tctcaaattacagggggcaaaatttttcaagaaggtctaaagtaaaaaaattcttcaaattataaggacgaaattcaaaataaatattttacagggggaa 31920357  T
Q  100 aatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    || | ||||||||||| |||||| || | |||| |||||||||||||    
T  31920358 aaccggaaatgacctatattacagggaggtaaatcactattaaccct 31920404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 33052875 - 33052811
Alignment:
Q  86 ttttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaat 151  Q
    ||||||||||||||||| | |||||||||| ||||||||||| |||||  ||||||||||||||||    
T  33052875 ttttacagggggaaaataaaaaatgacctatattacaagggg-taaagacctattaaccctaaaat 33052811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 34048379 - 34048318
Alignment:
Q  3 tcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaa 64  Q
    |||||||||||||||| ||||||  |||||||||||||||| ||||| |||||| |||||||    
T  34048379 tcaaattacaaggggtaaaatttgccatgaaggtccaaaactaaaaactcttcaaattacaa 34048318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 146
Target Start/End: Complemental strand, 4414045 - 4413926
Alignment:
Q  26 ttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagg-gggaaaatcagaaatgacctaaattacaag 124  Q
    |||||||||||||||||||| |||||||||| ||||||| || |||||||        ||||||||||| || |||| | ||||||||||| ||||| ||    
T  4414045 ttcatgaaggtccaaaacca-aaaatcttcaaattacaaggacgaaattcaaaaaaaatattttacaggaggtaaaaccggaaatgacctatattac-ag 4413948  T
Q  125 gggttaaagcactattaaccct 146  Q
    ||| |||| |||||||||||||    
T  4413947 ggggtaaaacactattaaccct 4413926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 4414126 - 4414174
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaa 50  Q
    ||||||||||| || ||||||| ||||||||||||||||||||||||||    
T  4414126 ctcaaattacagggagtgaaatatttcatgaaggtccaaaaccaaaaaa 4414174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 6896927 - 6896875
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatctt 54  Q
    ||||||||||| | ||||||||||| ||||||||||||||| |||||||||||    
T  6896927 ctcaaattacaggtggtgaaattttccatgaaggtccaaaatcaaaaaatctt 6896875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 42368636 - 42368708
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaatt 74  Q
    ||||||||||| || ||| ||||||  || ||| ||||||||||||||||||||| ||||||| |||||||||    
T  42368636 ctcaaattacagggagtggaattttctataaagatccaaaaccaaaaaatcttcaaattacaaggatgaaatt 42368708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 147
Target Start/End: Complemental strand, 711298 - 711235
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaacccta 147  Q
    |||||||||||||||||| || |||||||||| |||||| |||| |||||  ||||||||||||    
T  711298 tattttacagggggaaaaccataaatgacctatattacaggggggtaaagacctattaacccta 711235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 149
Target Start/End: Original strand, 9673124 - 9673191
Alignment:
Q  83 ttattttacaggggg-aaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaa 149  Q
    ||||||||||||||| |||| || |||||||||| |||||| |||| |||||||| ||||||||||||    
T  9673124 ttattttacaggggggaaaaccaaaaatgacctatattacaggggggtaaagcacgattaaccctaaa 9673191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 147
Target Start/End: Original strand, 33659102 - 33659165
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaacccta 147  Q
    |||||||||||||||||| | ||||||||||| ||||||||||| ||||   ||||||||||||    
T  33659102 tattttacagggggaaaaccggaaatgacctatattacaagggggtaaatacctattaacccta 33659165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 147
Target Start/End: Original strand, 27433730 - 27433784
Alignment:
Q  93 gggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaacccta 147  Q
    ||||||||| || |||||||||| ||||||||||| |||||||| ||||||||||    
T  27433730 gggggaaaaccaaaaatgacctatattacaagggggtaaagcaccattaacccta 27433784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 150
Target Start/End: Original strand, 28593521 - 28593586
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaa 150  Q
    ||||||||||||| ||||  | |||||||||| |||||| ||||||||||||| |||||||||||||    
T  28593521 tattttacaggggaaaaacaaaaaatgacctatattaca-ggggttaaagcaccattaaccctaaaa 28593586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 21125319 - 21125372
Alignment:
Q  8 ttacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatatta 61  Q
    ||||| |||| ||||||| ||||||||||||||||| |||||||||||| ||||    
T  21125319 ttacagggggcgaaatttgtcatgaaggtccaaaactaaaaaatcttcaaatta 21125372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 41185002 - 41184938
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaa 149  Q
    ||||||||||||||||||||  |||||||||| |||||| |||| |||| |||||||| |||||||    
T  41185002 tattttacagggggaaaatcgaaaatgacctatattacatgggg-taaaacactattatccctaaa 41184938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 144
Target Start/End: Complemental strand, 4633820 - 4633761
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaacc 144  Q
    ||||||||||||||||||| | |||||||||| |||||| |||| |||||||| |||||||    
T  4633820 tattttacagggggaaaataaaaaatgacctatattacatgggg-taaagcaccattaacc 4633761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 23108770 - 23108714
Alignment:
Q  8 ttacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaa 64  Q
    ||||| |||||||||||| ||||||||||| ||||||||||||  |||| |||||||    
T  23108770 ttacagggggtgaaatttgtcatgaaggtcaaaaaccaaaaaaaattcaaattacaa 23108714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 25919815 - 25919851
Alignment:
Q  28 catgaaggtccaaaaccaaaaaatcttcatattacaa 64  Q
    ||||||||||||||||||||||||||||| |||||||    
T  25919815 catgaaggtccaaaaccaaaaaatcttcaaattacaa 25919851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 27331126 - 27331166
Alignment:
Q  24 ttttcatgaaggtccaaaaccaaaaaatcttcatattacaa 64  Q
    |||||||||||||| |||||||||||||||||| |||||||    
T  27331126 ttttcatgaaggtctaaaaccaaaaaatcttcaaattacaa 27331166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 31567846 - 31567882
Alignment:
Q  27 tcatgaaggtccaaaaccaaaaaatcttcatattaca 63  Q
    |||||||||||||||||||||||||||||| ||||||    
T  31567846 tcatgaaggtccaaaaccaaaaaatcttcaaattaca 31567882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 150
Target Start/End: Original strand, 41959170 - 41959214
Alignment:
Q  106 aaatgacctaaattacaaggggttaaagcactattaaccctaaaa 150  Q
    |||||||||| ||||||||||| ||||||||||||||||| ||||    
T  41959170 aaatgacctatattacaagggggtaaagcactattaacccgaaaa 41959214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 147
Target Start/End: Original strand, 10976744 - 10976806
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaacccta 147  Q
    |||||||||||||||||| | ||||||||||| ||||| ||||| |||||  ||||||||||||    
T  10976744 tattttacagggggaaaaccggaaatgacctatattac-agggggtaaagacctattaacccta 10976806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 146
Target Start/End: Original strand, 24197499 - 24197562
Alignment:
Q  84 tattttaca-gggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    ||||||||| ||||||||| | ||||||| ||| ||||||||||| |||||||| |||||||||    
T  24197499 tattttacaagggggaaaaccggaaatgaactatattacaagggggtaaagcaccattaaccct 24197562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 26243219 - 26243173
Alignment:
Q  26 ttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaat 73  Q
    |||||||||||||||||||| |||||||||| |||||||||| |||||    
T  26243219 ttcatgaaggtccaaaacca-aaaatcttcaaattacaatgacgaaat 26243173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 143
Target Start/End: Original strand, 30907615 - 30907662
Alignment:
Q  96 ggaaaatcagaaatgacctaaattacaaggggttaaagcactattaac 143  Q
    ||||||||| | |||||||||||||||||||| |||| ||||||||||    
T  30907615 ggaaaatcaaatatgacctaaattacaagggggtaaaacactattaac 30907662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 41185099 - 41185045
Alignment:
Q  20 aaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    ||||||| ||||||||||||||| ||||||||| ||| ||||||| ||||||||||    
T  41185099 aaattttccatgaaggtccaaaatcaaaaaatc-tcaaattacaaggatgaaattc 41185045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 146
Target Start/End: Complemental strand, 39153477 - 39153415
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    ||||||||| |||||||| | ||||||||||| |||||| |||| |||||  |||||||||||    
T  39153477 tattttacatggggaaaaccggaaatgacctatattacaggggggtaaagacctattaaccct 39153415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 25233942 - 25234003
Alignment:
Q  86 ttttacaggg-ggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    |||||||||| |||||| |  |||||||||| |||||  |||||||||||||||||||||||    
T  25233942 ttttacagggtggaaaaccgaaaatgacctatattacggggggttaaagcactattaaccct 25234003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 25298102 - 25298163
Alignment:
Q  86 ttttacaggg-ggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    |||||||||| |||||| |  |||||||||| |||||  |||||||||||||||||||||||    
T  25298102 ttttacagggtggaaaaccgaaaatgacctatattacggggggttaaagcactattaaccct 25298163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 145
Target Start/End: Original strand, 31861731 - 31861784
Alignment:
Q  92 agggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccc 145  Q
    |||| |||||||||||||||| || ||||||||||| |||||  ||||||||||    
T  31861731 agggtgaaaatcagaaatgacatatattacaagggggtaaagacctattaaccc 31861784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 2724544 - 2724469
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaatgtatattat 160  Q
    |||||||||||| ||||| | || |||||||| ||||| ||||| |||||||| ||||||||| | || ||||||||    
T  2724544 tattttacagggagaaaaccggatatgacctatattac-agggggtaaagcaccattaacccttatatttatattat 2724469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 4414213 - 4414257
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggt 128  Q
    |||||||||||||||||| ||||||||||||| | |||| |||||    
T  4414213 tattttacagggggaaaaccagaaatgacctataatacagggggt 4414257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 145
Target Start/End: Original strand, 28277459 - 28277519
Alignment:
Q  85 attttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccc 145  Q
    |||||||||||||||||  | |||||||||| |||||| |||| |||| ||| ||||||||    
T  28277459 attttacagggggaaaacaaaaaatgacctatattacaggggggtaaaacaccattaaccc 28277519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 97; Significance: 8e-48; HSPs: 76)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 18049048 - 18049193
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttaca-gggggaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       |||||||||| |||||||    
T  18049048 tctcaaattacagggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaaggatgaaattcaaaaaaattattttacaggggggaa 18049147  T
Q  100 aatcagaaatgacctaaattacaaggggttaaagcactattaaccc 145  Q
    || |||||||||||||||||||| ||| ||||||||||||||||||    
T  18049148 aaccagaaatgacctaaattacatgggcttaaagcactattaaccc 18049193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 1975628 - 1975483
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggg-gaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       |||||||| ||||| |||    
T  1975628 tctcaaattacagggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaaggatgaaattcaaaaaaattattttataggggagaa 1975529  T
Q  100 aatcagaaatgacctaaattacaaggggttaaagcactattaaccc 145  Q
    ||||||||||||||||||||||| || ||||||||||| |||||||    
T  1975528 aatcagaaatgacctaaattacagggagttaaagcactgttaaccc 1975483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 42794241 - 42794388
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacag-ggggaa 99  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||       ||||||||||| ||| ||    
T  42794241 tctcaaactacagggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcgtattacaaggatgaaattcaaaaaaattattttacagagggaaa 42794340  T
Q  100 aatcagaaatgacctaaattacaaggggttaaagcactattaacccta 147  Q
    || |||||||||||||||||||| ||| ||||||||||||||||||||    
T  42794341 aaccagaaatgacctaaattacaggggattaaagcactattaacccta 42794388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 13 - 146
Target Start/End: Complemental strand, 43830636 - 43830502
Alignment:
Q  13 aggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttac-agggggaaaatcagaaatga 111  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||       ||||||||| |||||||||| ||||||| |    
T  43830636 aggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcgtattacaaggatgaaattcaaaaaaattattttacaagggggaaaaccagaaataa 43830537  T
Q  112 cctaaattacaaggggttaaagcactattaaccct 146  Q
    ||||||||||| || ||||||||||||||||||||    
T  43830536 cctaaattacagggagttaaagcactattaaccct 43830502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 146
Target Start/End: Complemental strand, 33218468 - 33218323
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggg-gaaa 100  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||| ||| ||||||||||        ||||||||||||| ||||    
T  33218468 ctcaaattacagggggtgaaattttccatgaaggtccaaaaccaaaaaatcttcaaatttcaaggatgaaattcaaaaaaaatattttacaggggcgaaa 33218369  T
Q  101 atcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    | | ||||||||||| |||||  |||| ||||||||||||||||||    
T  33218368 accggaaatgacctatattactgggggataaagcactattaaccct 33218323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 145
Target Start/End: Complemental strand, 15543858 - 15543714
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttaca-gggggaaa 100  Q
    ||||||||||| || |||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||        ||||||||| ||||||||    
T  15543858 ctcaaattacagggagtgaaattttccatgaaggtccaaaaccaaaaaatcttcaaattacaaggatgaaattcaaaaaaaatattttacaggggggaaa 15543759  T
Q  101 atcagaaatgacctaaattacaaggggttaaagcactattaaccc 145  Q
    | | ||||||||||| |||||| |||| |||| ||||||||||||    
T  15543758 accggaaatgacctatattacaggggggtaaaacactattaaccc 15543714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 146
Target Start/End: Original strand, 16139031 - 16139174
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaaa 101  Q
    |||||| |||| || |||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||| ||        ||||||||||||||||||    
T  16139031 ctcaaaatacagggagtgaaattttccatgaaggtccaaaaccaaaaaatcttcaaattacaaggatgaaagtcaaaaaaaatattttacagggggaaaa 16139130  T
Q  102 tcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
      | |||||||||| ||||| ||||| ||||||||||||||||||    
T  16139131 caaaaaatgacctatattac-aggggataaagcactattaaccct 16139174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 145
Target Start/End: Original strand, 19272894 - 19273037
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaaa 101  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||        ||||||||||||||||||    
T  19272894 ctcaaattacagggggtaaaattttccatgaaggtccaaaaccaaaaaatcttcaaattacaaggatgaaattcaaaaaaactattttacagggggaaaa 19272993  T
Q  102 tcagaaatgacctaaattacaaggggttaaagcactattaaccc 145  Q
     |  ||||||| || |||| | |||| ||||  |||||||||||    
T  19272994 ccgaaaatgacttatattataggggggtaaaagactattaaccc 19273037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 147
Target Start/End: Original strand, 38950087 - 38950233
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagg-gggaaa 100  Q
    ||||||||||| || |||||||||| |||||||||||||||| |||||||||||| |||| || ||||||||||        ||||||||||| ||||||    
T  38950087 ctcaaattacagggagtgaaattttccatgaaggtccaaaacaaaaaaatcttcaaattataaggatgaaattcaaaaaaaatattttacaggtgggaaa 38950186  T
Q  101 atcagaaatgacctaaattacaaggggttaaagcactattaacccta 147  Q
    | | |||||| |||| |||||| |||| |||| ||||||||||||||    
T  38950187 accggaaatggcctatattacaggggggtaaaacactattaacccta 38950233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 2 - 146
Target Start/End: Complemental strand, 9419643 - 9419500
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaaa 101  Q
    ||||||||||| |||||||||||||   ||||||||||||||||||||||||||| ||||||| ||||||||||        ||||||||||||||||||    
T  9419643 ctcaaattacagggggtgaaattttcattgaaggtccaaaaccaaaaaatcttcaaattacaaggatgaaattcaaaaaaaatattttacagggggaaaa 9419544  T
Q  102 tcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
        |||||||||| ||||| ||||| |||| || ||||||||||    
T  9419543 ctgaaaatgacctatattac-agggggtaaaacattattaaccct 9419500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 144
Target Start/End: Complemental strand, 776418 - 776276
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaaa 101  Q
    ||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||| ||| ||| ||| | ||||         |||||||||||||||||    
T  776418 ctcaaattacagggggtgaaaatttccatgaaggtccaaaaccaaaaaatcttcaaatttcaaggataagattcaaaaaaaaaattttacagggggaaaa 776319  T
Q  102 tcagaaatgacctaaattacaaggggttaaagcactattaacc 144  Q
       ||||||||||| |||||||| || |||| |||||||||||    
T  776318 ctggaaatgacctatattacaagagggtaaaacactattaacc 776276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 38127993 - 38128066
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  38127993 ctcaaattacagggggtaaaattttccatgaaggtccaaaaccaaaaaatcttcaaattacaaggatgaaattc 38128066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 41100923 - 41101069
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacaggg-ggaa 99  Q
    |||||||||||| |||| |||||||||||||||| ||||||||||||||||||||| ||||||| || ||||            ||||||||||| ||||    
T  41100923 tctcaaattacagggggcgaaatttttcatgaagatccaaaaccaaaaaatcttcaaattacaaggacgaaaactaaacaaaaaattttacagggtggaa 41101022  T
Q  100 aatcagaaatgacctaaattacaaggggttaaagcactattaacccta 147  Q
    || | ||||||||||| ||||| ||||| |||||||||||||||||||    
T  41101023 aaccggaaatgacctatattac-agggggtaaagcactattaacccta 41101069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 18756494 - 18756421
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    ||||||||||| || |||||||||| ||||||||||||||||||||||||||||| ||||||| || |||||||    
T  18756494 ctcaaattacagggagtgaaattttccatgaaggtccaaaaccaaaaaatcttcaaattacaaagacgaaattc 18756421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 7318298 - 7318358
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatatta 61  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  7318298 tctcaaattacagggggtgaaattttccatgaaggtccaaaaccaaaaaatcttcaaatta 7318358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 39752005 - 39751860
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttac-agggggaa 99  Q
    |||||||| |||||||| |||||||  ||||||||||||||||||||||||||||| ||||||  || ||||  |         ||||||| ||| ||||    
T  39752005 tctcaaatgacaaggggcgaaatttgccatgaaggtccaaaaccaaaaaatcttcaaattacatagacgaaaaccaaacaaaaaattttacaaggtggaa 39751906  T
Q  100 aatcagaaatgacctaaattacaaggggttaaagcactattaaccc 145  Q
    || | ||||||||||| ||||||||||||||||| |||||||||||    
T  39751905 aaccggaaatgacctatattacaaggggttaaagtactattaaccc 39751860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 146
Target Start/End: Complemental strand, 25103877 - 25103730
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc--nnnnnnnttattttacaggg-gga 98  Q
    ||||||||||| |||||| |||||| ||| |||||||||||||||||||| |||| ||| ||| ||||||||||          ||||||||||||  ||    
T  25103877 ctcaaattacagggggtgcaattttccataaaggtccaaaaccaaaaaatgttcaaatttcaaggatgaaattcaaaaaaaatatattttacagggacga 25103778  T
Q  99 aaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    ||| | ||||||||||| |||||| |||| ||||||||||||||||||    
T  25103777 aaaccggaaatgacctatattacagggggataaagcactattaaccct 25103730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 146
Target Start/End: Complemental strand, 29949379 - 29949251
Alignment:
Q  17 gtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaaatcagaaatgacctaa 116  Q
    |||||||||||||||||| |||| |||||||||||||||| ||| ||| ||||||||||        ||||||||||| | |||||| |||||||| ||     
T  29949379 gtgaaatttttcatgaagatccagaaccaaaaaatcttcaaatttcaaggatgaaattcaaaaaaaatattttacaggagaaaaatcggaaatgacatat 29949280  T
Q  117 attacaaggggttaaagcactattaaccct 146  Q
    |||| |||| | |||| |||||||||||||    
T  29949279 atta-aaggaggtaaaacactattaaccct 29949251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 146
Target Start/End: Complemental strand, 36795296 - 36795155
Alignment:
Q  3 tcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaaat 102  Q
    |||||||||| ||||| |||||||||||||||||| |||||||||||||||| | ||||||| |||| ||| |        ||||||| ||| ||||||     
T  36795296 tcaaattacagggggtaaaatttttcatgaaggtctaaaaccaaaaaatctttaaattacaaagatggaatccaaaaaaaatattttagaggaggaaaac 36795197  T
Q  103 cagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    |  |||||||||| ||||||  ||| |||| |||||||||||||    
T  36795196 cgaaaatgacctatattaca--ggggtaaaacactattaaccct 36795155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 874535 - 874585
Alignment:
Q  14 ggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaa 64  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  874535 ggggtgaaatttttcatgaaggtctaaaaccaaaaaatctacatattacaa 874585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 166
Target Start/End: Complemental strand, 24951964 - 24951883
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaatgtatattatacacat 166  Q
    |||||||||||||||||| || |||||||||| ||||| |||||||||||||| |||||||||| ||  ||||||||| ||||    
T  24951964 tattttacagggggaaaaccaaaaatgacctatattac-aggggttaaagcaccattaaccctataaactatattatatacat 24951883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 30497393 - 30497443
Alignment:
Q  14 ggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaa 64  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  30497393 ggggcgaaatttttcatgaaggtccaaaaccaaaaaatcttcaaattacaa 30497443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 147
Target Start/End: Complemental strand, 38949975 - 38949854
Alignment:
Q  26 ttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacaggggg-aaaatcagaaatgacctaaattacaag 124  Q
    |||||||||||||||||||||||| || ||| ||||||| || ||||| |        |||||||||||||| |||| | ||||||||||| |||||| |    
T  38949975 ttcatgaaggtccaaaaccaaaaa-tcatcaaattacaaggacgaaatccaaaaaatatattttacagggggtaaaaccggaaatgacctatattacagg 38949877  T
Q  125 gggttaaagcactattaacccta 147  Q
    |||||||| ||||||||||||||    
T  38949876 gggttaaaacactattaacccta 38949854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 39373194 - 39373262
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaa 71  Q
    ||||||||||| ||||||||||||| ||||||||| ||||| ||||||||||||| ||||||| ||||||    
T  39373194 ctcaaattaca-ggggtgaaattttccatgaaggttcaaaatcaaaaaatcttcaaattacaaagatgaa 39373262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 16303766 - 16303694
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaatt 74  Q
    ||||||||| | |||||||||||||  ||||||||||||||| |||||||||||| ||| ||| |||||||||    
T  16303766 ctcaaattagagggggtgaaattttctatgaaggtccaaaacaaaaaaatcttcaaatttcaaggatgaaatt 16303694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 22846140 - 22846084
Alignment:
Q  18 tgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaatt 74  Q
    ||||||||| |||||||||||||||||||||||| |||| ||||||| |||||||||    
T  22846140 tgaaattttccatgaaggtccaaaaccaaaaaatattcaaattacaaggatgaaatt 22846084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 2526581 - 2526648
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatg 69  Q
    ||||||||| | ||||||||| |||||||||||||| |||||||||||||||| | ||||||| ||||    
T  2526581 ctcaaattagagggggtgaaaattttcatgaaggtctaaaaccaaaaaatctttaaattacaaggatg 2526648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 4157971 - 4157916
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttca 56  Q
    |||||||||||| |||||||||||||| |||||| | |||||||||||||||||||    
T  4157971 tctcaaattacagggggtgaaattttttatgaagattcaaaaccaaaaaatcttca 4157916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 10071275 - 10071212
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaa 64  Q
    |||||||| |||||||| |||||||  ||||||||||||||||||||||||||| | |||||||    
T  10071275 tctcaaatgacaaggggcgaaatttgccatgaaggtccaaaaccaaaaaatcttaaaattacaa 10071212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 16204437 - 16204390
Alignment:
Q  17 gtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaa 64  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||    
T  16204437 gtgaaattttccatgaaggtccaaaaccaaaaaatcttcaaattacaa 16204390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 122
Target Start/End: Original strand, 29949785 - 29949905
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaaa 101  Q
    ||||||||| | ||||  |||||||||||||||||| ||||||||||||| |||| ||||||| ||  |||| |        ||||||||||||||||||    
T  29949785 ctcaaattatagggggcaaaatttttcatgaaggtctaaaaccaaaaaattttcaaattacaaggacaaaatccaaagaaaatattttacagggggaaaa 29949884  T
Q  102 tcagaaatgacctaaattaca 122  Q
     | ||||||||||| ||||||    
T  29949885 ccggaaatgacctatattaca 29949905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 34831723 - 34831797
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaacc-aaaaaatcttcatattacaatgatgaaattc 75  Q
    ||||||||| | || |||||||||| |||||| |||||||||| |||||||||||| ||||||| ||||||||||    
T  34831723 ctcaaattaaatggagtgaaattttccatgaaagtccaaaaccaaaaaaatcttcaaattacaaggatgaaattc 34831797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 16260760 - 16260817
Alignment:
Q  17 gtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaatt 74  Q
    |||||||||| |||||||||||||||| |||||||||||| |||| || |||||||||    
T  16260760 gtgaaattttccatgaaggtccaaaactaaaaaatcttcaaattataaggatgaaatt 16260817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 19253638 - 19253691
Alignment:
Q  21 aatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaatt 74  Q
    |||||| ||||||||||||||||||||||||||| | ||||||| |||||||||    
T  19253638 aattttccatgaaggtccaaaaccaaaaaatctttaaattacaaggatgaaatt 19253691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 7007919 - 7007851
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatg 69  Q
    |||||||||||| ||||  ||||||| |||||||||| |||| ||||||||||||| ||||||| ||||    
T  7007919 tctcaaattacagggggcaaaattttccatgaaggtctaaaagcaaaaaatcttcaaattacaaggatg 7007851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 25293478 - 25293408
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaatt 74  Q
    ||||||||||| ||||| ||||||| ||||||||||||||| | ||||||||||| ||||||| |||||||||    
T  25293478 ctcaaattaca-ggggtaaaattttccatgaaggtccaaaatc-aaaaatcttcaaattacaaggatgaaatt 25293408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 18755169 - 18755122
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaa 49  Q
    ||||||||||| || |||||||||| ||||||||||||||||||||||    
T  18755169 ctcaaattacagggagtgaaattttccatgaaggtccaaaaccaaaaa 18755122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 148
Target Start/End: Complemental strand, 19253518 - 19253396
Alignment:
Q  26 ttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnt-tattttacaggggg-aaaatcagaaatgacctaaattacaa 123  Q
    |||||||||||||||||||||||| ||||||  |||||| || ||||| |       | |||||||||||| | |||||| ||||||||||| |||||||    
T  19253518 ttcatgaaggtccaaaaccaaaaa-tcttcaacttacaaggacgaaatccaaaaaaatatattttacagggagtaaaatcggaaatgacctatattacaa 19253420  T
Q  124 ggggttaaagcactattaaccctaa 148  Q
    ||||| ||| |||||||||||||||    
T  19253419 ggggtgaaa-cactattaaccctaa 19253396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 147
Target Start/End: Original strand, 34635939 - 34636002
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaacccta 147  Q
    |||||||||||||||||| | ||||||||||| |||||| |||| |||||  ||||||||||||    
T  34635939 tattttacagggggaaaaccggaaatgacctatattacaggggggtaaagacctattaacccta 34636002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 11673787 - 11673725
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaa 64  Q
    ||||||||||| |||   |||||||||||||||||| ||||| |||||||||||| |||||||    
T  11673787 ctcaaattacaggggacaaaatttttcatgaaggtctaaaacaaaaaaatcttcaaattacaa 11673725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 150
Target Start/End: Complemental strand, 29640823 - 29640758
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaa 150  Q
    |||||||||||||||||| || |||||||||| ||||| ||||| |||||||| |||||||| ||||    
T  29640823 tattttacagggggaaaaccaaaaatgacctatattac-agggggtaaagcaccattaacccaaaaa 29640758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 36525507 - 36525569
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaa 64  Q
    ||||||||||| ||||  |  ||||||||||||||| |||||||||||||||||| |||||||    
T  36525507 ctcaaattacagggggaaatttttttcatgaaggtctaaaaccaaaaaatcttcaaattacaa 36525569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 149
Target Start/End: Original strand, 14793456 - 14793516
Alignment:
Q  88 ttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaa 149  Q
    |||||||||||||| || |||||||||| ||||| ||||| |||||||| ||||||||||||    
T  14793456 ttacagggggaaaaccaaaaatgacctatattac-agggggtaaagcaccattaaccctaaa 14793516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 26498767 - 26498815
Alignment:
Q  26 ttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    ||||||||||||||||||||||||| ||||| ||||||| ||||||||||    
T  26498767 ttcatgaaggtccaaaaccaaaaaa-cttcaaattacaaggatgaaattc 26498815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 150
Target Start/End: Original strand, 38625133 - 38625197
Alignment:
Q  85 attttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaa 150  Q
    ||||||||||| |||||||||||||||| || ||||| ||||| |||||  |||||||||||||||    
T  38625133 attttacagggagaaaatcagaaatgacatatattac-agggggtaaagatctattaaccctaaaa 38625197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 28781794 - 28781734
Alignment:
Q  4 caaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaa 64  Q
    ||||||||| ||||  |||||||| ||||||||| |||||||||||||||| | |||||||    
T  28781794 caaattacagggggcaaaattttttatgaaggtctaaaaccaaaaaatctttaaattacaa 28781734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 29096998 - 29097050
Alignment:
Q  23 tttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    ||||||||||||||| |||||||||||||||| | ||||||| |||| |||||    
T  29096998 tttttcatgaaggtctaaaaccaaaaaatctttaaattacaaggatggaattc 29097050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 147
Target Start/End: Original strand, 24952056 - 24952114
Alignment:
Q  88 ttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaacccta 147  Q
    |||||||||||||| || |||||||||| ||||| ||||| |||||||| ||||||||||    
T  24952056 ttacagggggaaaaccaaaaatgacctatattac-agggggtaaagcaccattaacccta 24952114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 25103992 - 25104038
Alignment:
Q  26 ttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaat 73  Q
    ||||||||||||||||||| ||||||||||| ||||||| ||||||||    
T  25103992 ttcatgaaggtccaaaacc-aaaaatcttcaaattacaaggatgaaat 25104038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 26498653 - 26498595
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatatta 61  Q
    ||||||||||| ||||  ||| |||||||||||||| |||||||||||||||||| ||||    
T  26498653 ctcaaattaca-ggggcaaaaattttcatgaaggtctaaaaccaaaaaatcttcaaatta 26498595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 147
Target Start/End: Original strand, 26502589 - 26502652
Alignment:
Q  85 attttacagggg-gaaaatcagaaatgacctaaattacaaggggttaaagcactattaacccta 147  Q
    |||||| ||||| |||||||||||||||| || ||||||||||   ||||||||||||||||||    
T  26502589 attttataggggcgaaaatcagaaatgacatatattacaagggtgaaaagcactattaacccta 26502652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 128
Target Start/End: Complemental strand, 29098078 - 29098035
Alignment:
Q  85 attttacagggggaaaatcagaaatgacctaaattacaaggggt 128  Q
    ||||||||||||||||| |||||||||| || ||||||||||||    
T  29098078 attttacagggggaaaaccagaaatgacttatattacaaggggt 29098035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 146
Target Start/End: Complemental strand, 493788 - 493726
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    |||||||||||||| |||  | |||||||||| |||||| |||| |||||||| |||||||||    
T  493788 tattttacaggggggaaacaaaaaatgacctatattacaggggggtaaagcaccattaaccct 493726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 150
Target Start/End: Original strand, 5558449 - 5558514
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaa 150  Q
    ||||||||||||||||||  | |||||||||| ||||| ||||| |||||||| |||||||| ||||    
T  5558449 tattttacagggggaaaacaaaaaatgacctatattac-aggggataaagcaccattaacccaaaaa 5558514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 146
Target Start/End: Complemental strand, 7327828 - 7327767
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    ||||||||||||||||||  | |||||||||| ||||| ||||| |||||||| |||||||||    
T  7327828 tattttacagggggaaaacaaaaaatgacctatattac-agggggtaaagcaccattaaccct 7327767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 61
Target Start/End: Original strand, 11915234 - 11915268
Alignment:
Q  27 tcatgaaggtccaaaaccaaaaaatcttcatatta 61  Q
    |||||||||||||||||||||||||||||| ||||    
T  11915234 tcatgaaggtccaaaaccaaaaaatcttcaaatta 11915268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 64
Target Start/End: Original strand, 15580624 - 15580662
Alignment:
Q  26 ttcatgaaggtccaaaaccaaaaaatcttcatattacaa 64  Q
    ||||||||||||||||| ||||||||||||| |||||||    
T  15580624 ttcatgaaggtccaaaatcaaaaaatcttcaaattacaa 15580662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 25227885 - 25227819
Alignment:
Q  84 tattttacaggggg-aaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaa 149  Q
    |||||||||||||| |||| ||||||||||||| |||||| | || |||||  ||||||||||||||    
T  25227885 tattttacaggggggaaaaccagaaatgacctatattacaggagggtaaagacctattaaccctaaa 25227819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 148
Target Start/End: Complemental strand, 34831610 - 34831488
Alignment:
Q  26 ttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacaggggg-aaaatcagaaatgacctaaattacaag 124  Q
    |||||||||| ||||||||||||| |||||| ||||||| ||  |||| |        |||||||||||||| |||| || ||||||| || |||||| |    
T  34831610 ttcatgaagggccaaaaccaaaaa-tcttcaaattacaaggacaaaatccaaaaaatatattttacagggggcaaaaccaaaaatgacatatattacagg 34831512  T
Q  125 gggttaaagcactattaaccctaa 148  Q
    ||| |||| |||||||||||||||    
T  34831511 gggataaaacactattaaccctaa 34831488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 141
Target Start/End: Original strand, 35337131 - 35337189
Alignment:
Q  83 ttattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactatta 141  Q
    |||||||||||||| |||| || |||||||||| |||||| |||| |||||||| ||||    
T  35337131 ttattttacaggggaaaaaccaaaaatgacctatattacaggggggtaaagcaccatta 35337189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 152
Target Start/End: Complemental strand, 85497 - 85432
Alignment:
Q  87 tttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaatg 152  Q
    |||||||||| |||| |  |||||||||| ||||||||||| |||||  ||||||||||| |||||    
T  85497 tttacaggggaaaaaccgaaaatgacctatattacaagggggtaaagacctattaacccttaaatg 85432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 146
Target Start/End: Original strand, 758751 - 758803
Alignment:
Q  93 gggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    ||||||||| | ||||||||||| ||||| ||||| ||||||||||||||||||    
T  758751 gggggaaaaccggaaatgacctatattac-agggggtaaagcactattaaccct 758803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 16590567 - 16590530
Alignment:
Q  26 ttcatgaaggtccaaaaccaaaaaatcttcatattaca 63  Q
    ||||||||||| ||||||||||||||||||| ||||||    
T  16590567 ttcatgaaggtgcaaaaccaaaaaatcttcaaattaca 16590530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 22535681 - 22535718
Alignment:
Q  85 attttacagggggaaaatcagaaatgacctaaattaca 122  Q
    ||||||||||||||||| ||||||||||||| ||||||    
T  22535681 attttacagggggaaaaccagaaatgacctatattaca 22535718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 156
Target Start/End: Complemental strand, 34635767 - 34635695
Alignment:
Q  84 tattttacaggggg-aaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaatgtata 156  Q
    |||||||||||||| |||| | ||||||||||| ||||| ||||| |||||  |||||||||||||||| ||||    
T  34635767 tattttacaggggggaaaaccggaaatgacctatattac-agggggtaaagacctattaaccctaaaatctata 34635695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 145
Target Start/End: Complemental strand, 11839087 - 11839027
Alignment:
Q  86 ttttacaggg-ggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccc 145  Q
    |||||||||| |||||| | ||||||||||| |||||| |||| |||| ||||||||||||    
T  11839087 ttttacagggtggaaaaccggaaatgacctatattacagggggataaaacactattaaccc 11839027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 16590662 - 16590698
Alignment:
Q  27 tcatgaaggtccaaaaccaaaaaatcttcatattaca 63  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  16590662 tcatgaaggtccaaaaccaaataatcttcaaattaca 16590698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 17188769 - 17188733
Alignment:
Q  28 catgaaggtccaaaaccaaaaaatcttcatattacaa 64  Q
    ||||||||||||||| ||||||||||||| |||||||    
T  17188769 catgaaggtccaaaatcaaaaaatcttcaaattacaa 17188733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 147
Target Start/End: Original strand, 18701798 - 18701846
Alignment:
Q  99 aaatcagaaatgacctaaattacaaggggttaaagcactattaacccta 147  Q
    ||||| ||||||||||| ||||||||||| |||||  ||||||||||||    
T  18701798 aaatcggaaatgacctatattacaagggggtaaagacctattaacccta 18701846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 145
Target Start/End: Original strand, 28149664 - 28149723
Alignment:
Q  85 attttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccc 145  Q
    ||||||||||||||||| | ||||||||||| |||||| ||||| ||| | ||||||||||    
T  28149664 attttacagggggaaaaccggaaatgacctatattacagggggtaaaaac-ctattaaccc 28149723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 31377765 - 31377801
Alignment:
Q  28 catgaaggtccaaaaccaaaaaatcttcatattacaa 64  Q
    |||||||||||||||||||| |||||||| |||||||    
T  31377765 catgaaggtccaaaaccaaataatcttcaaattacaa 31377801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 31397474 - 31397510
Alignment:
Q  27 tcatgaaggtccaaaaccaaaaaatcttcatattaca 63  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  31397474 tcatgaaggtccaaaaccaaataatcttcaaattaca 31397510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 31989569 - 31989605
Alignment:
Q  28 catgaaggtccaaaaccaaaaaatcttcatattacaa 64  Q
    |||||||||||||||||||| |||||||| |||||||    
T  31989569 catgaaggtccaaaaccaaagaatcttcaaattacaa 31989605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 33441565 - 33441502
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaa 148  Q
    |||||||||||||| ||| || |||| ||||| ||||| ||||| |||||||| |||||||||||    
T  33441565 tattttacaggggggaaaccaaaaataacctatattac-agggggtaaagcaccattaaccctaa 33441502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 146
Target Start/End: Original strand, 39752197 - 39752237
Alignment:
Q  106 aaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    |||||||||| ||||||||||| |||| |||||||||||||    
T  39752197 aaatgacctatattacaagggggtaaaacactattaaccct 39752237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 45464514 - 45464458
Alignment:
Q  95 gggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaat 151  Q
    ||||||||||||||||||||| |||||   ||| |||||  ||||||||||||||||    
T  45464514 gggaaaatcagaaatgacctatattacttagggataaagacctattaaccctaaaat 45464458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 2e-45; HSPs: 78)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 14187769 - 14187624
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacaggggg-aa 99  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       ||||||||||||||| ||    
T  14187769 tctctaattacagggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaaggatgaaattcaaaaaaattattttacagggggaaa 14187670  T
Q  100 aatcagaaatgacctaaattacaaggggttaaagcactattaaccc 145  Q
    || |||||||||||||||||||| |||||||||| |||||||||||    
T  14187669 aaccagaaatgacctaaattacagggggttaaagtactattaaccc 14187624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 20164248 - 20164103
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttac-agggggaa 99  Q
    |||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       ||||||||| ||||| ||    
T  20164248 tctcaatttacaggggatgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaaggatgaaattcaaaaaaattattttacaaggggaaa 20164149  T
Q  100 aatcagaaatgacctaaattacaaggggttaaagcactattaaccc 145  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||    
T  20164148 aatcagaaatgacctaaattacaggaggttaaagcactattaaccc 20164103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 150
Target Start/End: Original strand, 17052047 - 17052194
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaaa 101  Q
    ||||||||||| || ||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||         |||||||||||||| |||    
T  17052047 ctcaaattacagggagtgaaatttttcatgaaggtccaaaacaaaaaaatcttcaaattacaaggatgaaattttagaaaaatattttacaggggg-aaa 17052145  T
Q  102 tcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaa 150  Q
    ||  ||||||| || |||||| |||  ||||||||||||||||||||||    
T  17052146 tcgaaaatgacatatattacatgggtgtaaagcactattaaccctaaaa 17052194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 146
Target Start/End: Complemental strand, 21444009 - 21443864
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc-nnnnnnnttattttacagggggaaa 100  Q
    ||||||||||| || |||||||||| ||||||||||||||||||||||||||||| ||| ||| ||||||||||         |||||||||| || |||    
T  21444009 ctcaaattacagggtgtgaaattttccatgaaggtccaaaaccaaaaaatcttcaaatttcaaggatgaaattcaaaaaaaaatattttacagaggaaaa 21443910  T
Q  101 atcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    | |||||||||| || |||||| |||| |||| |||||||||||||    
T  21443909 accagaaatgacttatattacagggggataaaacactattaaccct 21443864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 35158414 - 35158487
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  35158414 ctcaaattacagggggtaaaattttccatgaaggtccaaaaccaaaaaatcttcaaattacaaagatgaaattc 35158487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 26254701 - 26254629
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaatt 74  Q
    ||||||||||||||||||||||||| | |||||||||||| |||||||||||||| ||||||| |||||||||    
T  26254701 ctcaaattacaaggggtgaaattttccgtgaaggtccaaatccaaaaaatcttcaaattacaaggatgaaatt 26254629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 146
Target Start/End: Complemental strand, 2624547 - 2624404
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaaa 101  Q
    |||||||||||  | |||||||||| |||||||| |||||||||||||||||||| ||||||| ||||||||||        ||||||||| | |||||     
T  2624547 ctcaaattacagtgagtgaaattttccatgaaggcccaaaaccaaaaaatcttcaaattacaaggatgaaattcaaaaaaagtattttacaagaggaaac 2624448  T
Q  102 tcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    ||| |||||||||| ||||||  |||| |||| ||||||||||||    
T  2624447 tcaaaaatgacctatattacagagggtaaaag-actattaaccct 2624404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 145
Target Start/End: Complemental strand, 5864588 - 5864444
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaaa 101  Q
    ||||||||||| ||||| ||||||| |||||||  |||||||||||||||||||| ||||||| ||||||||||        ||||||||||||||||||    
T  5864588 ctcaaattacagggggtaaaattttccatgaagaaccaaaaccaaaaaatcttcaaattacaaggatgaaattcaaaaaaactattttacagggggaaaa 5864489  T
Q  102 tc-agaaatgacctaaattacaaggggttaaagcactattaaccc 145  Q
     |  |||||||| || |||||| |||| ||||  |||||||||||    
T  5864488 actggaaatgacttatattacaggggggtaaaagactattaaccc 5864444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 442766 - 442839
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| | ||||||| ||||||||||    
T  442766 ctcaaattacaaggggtgaaattttcattgaaggtccaaaaccaaaaaatctttaaattacaaggatgaaattc 442839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 2 - 147
Target Start/End: Original strand, 47370384 - 47370530
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttac-agggggaaa 100  Q
    |||||||||||||||||||||||||   ||||||||||||| ||||||||||| | ||||||| ||||||||||        |||||||| |||||||||    
T  47370384 ctcaaattacaaggggtgaaattttcattgaaggtccaaaatcaaaaaatctttaaattacaaggatgaaattcaaaagaaatattttacaagggggaaa 47370483  T
Q  101 atcagaaatgacctaaattacaaggggttaaagcactattaacccta 147  Q
    |   |||||| |||| |||||| || | |||| ||||||||||||||    
T  47370484 actggaaatggcctatattacagggaggtaaaacactattaacccta 47370530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 146
Target Start/End: Complemental strand, 12005407 - 12005263
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttac-agggggaaa 100  Q
    ||||||||||||||| |||||||||   ||||||||||||||||||||||||| | ||||||| ||||||||||        |||||||| |||||||||    
T  12005407 ctcaaattacaagggatgaaattttcattgaaggtccaaaaccaaaaaatctttaaattacaaggatgaaattcaaaagaaatattttacaagggggaaa 12005308  T
Q  101 atcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    |   |||||| |||| ||||| ||||| |||| |||||||||||||    
T  12005307 actggaaatggcctatattac-agggggtaaaacactattaaccct 12005263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 147
Target Start/End: Original strand, 36374409 - 36374557
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc--nnnnnnnttattttacagg-ggga 98  Q
    ||||||||||| ||||||||||||| | ||||||||||||||||||||| ||||| ||| ||| ||||||||||          ||||||||||| | ||    
T  36374409 ctcaaattacagggggtgaaattttccgtgaaggtccaaaaccaaaaaagcttcaaatttcaaggatgaaattcaaaaaaaaaatattttacaggagcga 36374508  T
Q  99 aaatcagaaatgacctaaattacaaggggttaaagcactattaacccta 147  Q
    |||| | |||||||||| ||||||  ||| |||||||||||||||||||    
T  36374509 aaataaaaaatgacctatattacagagggataaagcactattaacccta 36374557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 21022534 - 21022463
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaa 72  Q
    |||||||||||| |||| |||||||  ||||||||||||||||||||||||||||| ||||||| |||||||    
T  21022534 tctcaaattacagggggcgaaatttgccatgaaggtccaaaaccaaaaaatcttcaaattacaaggatgaaa 21022463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 145
Target Start/End: Original strand, 34436848 - 34436991
Alignment:
Q  3 tcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacaggg-ggaaaa 101  Q
    ||||||||| ||||| |||||||  ||||||||||||||||||||||||||||| |||| || || ||||  |         |||| |||||| ||||||    
T  34436848 tcaaattactaggggcgaaatttgccatgaaggtccaaaaccaaaaaatcttcaaattataaggacgaaaaccaaacaaaaaatttcacagggtggaaaa 34436947  T
Q  102 tcagaaatgacctaaattacaaggggttaaagcactattaaccc 145  Q
    | | |||||||||||||||||| ||| |||||||||||||||||    
T  34436948 taaaaaatgacctaaattacaaaggggtaaagcactattaaccc 34436991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 49094193 - 49094319
Alignment:
Q  17 gtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaaatcagaaatgacctaa 116  Q
    ||||||||||| ||||| ||| |||||||||||||||||| |||| || ||||||||||        ||||||||||||| | |||| |||||||||||     
T  49094193 gtgaaattttttatgaaagtcaaaaaccaaaaaatcttcaaattataaggatgaaattcaaaaaatatattttacaggggtagaatccgaaatgacctat 49094292  T
Q  117 attacaaggggttaaagcactattaacc 144  Q
    ||||| ||||| |||| |||||||||||    
T  49094293 attac-agggggtaaatcactattaacc 49094319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 3402033 - 3402179
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacaggg-ggaa 99  Q
    ||||||||||||||||| |||||||| ||||||| || |||||||||||||||||| ||||||| || ||||            ||||||||||| ||||    
T  3402033 tctcaaattacaaggggcgaaattttccatgaagttctaaaaccaaaaaatcttcaaattacaaggacgaaaactaaaccaaaaattttacagggtggaa 3402132  T
Q  100 aatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    ||||  |||||||||| ||||||  ||| ||||||||||||||||||    
T  3402133 aatcgaaaatgacctatattacagaggggtaaagcactattaaccct 3402179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 15721161 - 15721234
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    ||||||||||| || |||||||||| |||||||||||||||||||||||  |||| ||||||| ||||||||||    
T  15721161 ctcaaattacagggagtgaaattttccatgaaggtccaaaaccaaaaaaatttcaaattacaaggatgaaattc 15721234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 21521959 - 21521886
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    ||||||||| | |||||||||||||   ||||||||||||||||||||||||||| ||||||| ||||||||||    
T  21521959 ctcaaattatagggggtgaaattttcattgaaggtccaaaaccaaaaaatcttcaaattacaaggatgaaattc 21521886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 93 - 151
Target Start/End: Complemental strand, 1492812 - 1492754
Alignment:
Q  93 gggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaat 151  Q
    ||||||||| || |||||||||| ||||||||||| |||||||||||||||||||||||    
T  1492812 gggggaaaaccaaaaatgacctatattacaagggggtaaagcactattaaccctaaaat 1492754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 149
Target Start/End: Complemental strand, 13263987 - 13263865
Alignment:
Q  26 ttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaaatcagaaatgacctaaattacaagg 125  Q
    |||||||||||||||||||||||| |||||| ||||||| || ||||| |        || |||||||||| |||| | ||||||||||| |||||| ||    
T  13263987 ttcatgaaggtccaaaaccaaaaa-tcttcaaattacaaagacgaaatccaaaaaaaataatttacaggggtaaaaccggaaatgacctatattacaggg 13263889  T
Q  126 ggttaaagcactattaaccctaaa 149  Q
    || |||| ||||||||||||||||    
T  13263888 gggtaaaacactattaaccctaaa 13263865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 40938340 - 40938410
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaa 72  Q
    ||||||||||| ||| ||||||||| | ||||||||||||||||||||||||||| ||| ||| |||||||    
T  40938340 ctcaaattacaggggatgaaattttccgtgaaggtccaaaaccaaaaaatcttcaaatttcaaggatgaaa 40938410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 11576713 - 11576640
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    ||||||||||||||||||||| ||| ||||||||| |||||| |||||||||||| ||||  | ||||||||||    
T  11576713 ctcaaattacaaggggtgaaaatttccatgaaggttcaaaactaaaaaatcttcaaattatgaggatgaaattc 11576640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 148
Target Start/End: Original strand, 31863967 - 31864088
Alignment:
Q  26 ttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaaatcagaaatgacctaaattacaagg 125  Q
    ||||||||||||||||||||||||| ||||| ||||||| || | ||| |         ||||||||||||| ||| | ||||||||||| |||||| ||    
T  31863967 ttcatgaaggtccaaaaccaaaaaa-cttcaaattacaaggagggaatccaaaaagaaaattttacaggggggaaaccggaaatgacctatattacaggg 31864065  T
Q  126 ggttaaagcactattaaccctaa 148  Q
    || ||||||||||||||||||||    
T  31864066 ggataaagcactattaaccctaa 31864088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 24478152 - 24478104
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaa 50  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  24478152 ctcaaattacaagtggtgaaattttccatgaaggtccaaaaccaaaaaa 24478104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 128
Target Start/End: Original strand, 32946486 - 32946611
Alignment:
Q  3 tcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaaat 102  Q
    |||||||||| ||| | |||||||||||||||||| ||||| |||||||||||| ||||||| || | ||| |        ||||||| ||||||||||     
T  32946486 tcaaattacaggggataaaatttttcatgaaggtctaaaacaaaaaaatcttcaaattacaaggacggaatccaaaaaaaatattttatagggggaaaac 32946585  T
Q  103 cagaaatgacctaaattacaaggggt 128  Q
    | ||||||||||| |||||| |||||    
T  32946586 cggaaatgacctatattacagggggt 32946611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 41380620 - 41380691
Alignment:
Q  3 tcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    |||||||||| || |||||||||| ||||||||| ||||| ||||||||||||| ||||||| ||||||||||    
T  41380620 tcaaattacagggagtgaaatttt-catgaaggttcaaaagcaaaaaatcttcaaattacaaggatgaaattc 41380691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 151
Target Start/End: Original strand, 17167700 - 17167849
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacaggggg--aa 99  Q
    ||||||||||| ||||  |||||||||||||||||| ||||||||||||| || | ||||||| || | ||  |        ||||||||||||||  ||    
T  17167700 ctcaaattacagggggaaaaatttttcatgaaggtctaaaaccaaaaaatatttaaattacaaggacggaa-accaaaaaaatattttacaggggggaaa 17167798  T
Q  100 aatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaat 151  Q
    || | ||||||||||| ||||| ||||| |||||||||||||||||||||||    
T  17167799 aaccggaaatgacctatattac-aggggataaagcactattaaccctaaaat 17167849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 31749518 - 31749577
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatatta 61  Q
    ||||||||||| ||||  |||||||||||||||||| |||||||||||||||||| ||||    
T  31749518 ctcaaattacagggggcaaaatttttcatgaaggtctaaaaccaaaaaatcttcaaatta 31749577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 44448551 - 44448614
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaa 64  Q
    ||||||||||||||||| ||||||||  ||||||||||||||||||||||| || | |||||||    
T  44448551 tctcaaattacaaggggcgaaattttcgatgaaggtccaaaaccaaaaaatattaaaattacaa 44448614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 150
Target Start/End: Original strand, 13286862 - 13286928
Alignment:
Q  85 attttacaggggg-aaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaa 150  Q
    ||||||||||||| |||| ||||||||||||| ||||||||||| |||||  |||||||||||||||    
T  13286862 attttacaggggggaaaaccagaaatgacctatattacaagggggtaaagacctattaaccctaaaa 13286928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 31750920 - 31750994
Alignment:
Q  2 ctcaaattacaagggg-tgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    |||||||||||||||| ||||||||| || | ||||| |||||||||||||||||| |||||||  |||||||||    
T  31750920 ctcaaattacaagggggtgaaattttccaggtaggtcaaaaaccaaaaaatcttcaaattacaagaatgaaattc 31750994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 38192734 - 38192592
Alignment:
Q  6 aattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaaatcag 105  Q
    ||||| ||||||  ||||||||||| |||||| ||||| |||||||||||| ||||||| || ||||| |        |||||||||||||||||| |      
T  38192734 aattataaggggcaaaatttttcataaaggtctaaaacaaaaaaatcttcaaattacaaggacgaaatccaaaaaatatattttacagggggaaaaccga 38192635  T
Q  106 aaatgacctaaattacaaggggttaaagcactattaaccctaaa 149  Q
    ||||||| || ||||| ||||  ||||| |||||||||||||||    
T  38192634 aaatgacatatattac-agggtgtaaagtactattaaccctaaa 38192592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 147
Target Start/End: Complemental strand, 15721048 - 15720927
Alignment:
Q  26 ttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacaggggg-aaaatcagaaatgacctaaattacaag 124  Q
    |||||||||||||||||||||||| || ||| ||||||| || |||| ||        |||||||||||||| |||| | ||||||||||| |||||| |    
T  15721048 ttcatgaaggtccaaaaccaaaaa-tcatcaaattacaaggacgaaagtcaaaaaaaatattttacagggggtaaaaccggaaatgacctatattacagg 15720950  T
Q  125 gggttaaagcactattaacccta 147  Q
    ||| |||| ||||||||||||||    
T  15720949 ggggtaaaacactattaacccta 15720927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 145
Target Start/End: Original strand, 22335515 - 22335576
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccc 145  Q
    |||||||||||||||||| || |||||||||| |||||| |||| |||||||| ||||||||    
T  22335515 tattttacagggggaaaaccaaaaatgacctatattacaggggggtaaagcaccattaaccc 22335576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 43596377 - 43596316
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccc 145  Q
    ||||||||||||| ||||| | |||||||||| |||||| ||||| ||||||||||||||||    
T  43596377 tattttacaggggaaaaataaaaaatgacctatattacagggggtaaaagcactattaaccc 43596316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 43707055 - 43706998
Alignment:
Q  17 gtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaatt 74  Q
    ||||||||||||||||||||||||||||||||||  |||| ||||||| ||| |||||    
T  43707055 gtgaaatttttcatgaaggtccaaaaccaaaaaaatttcaaattacaaggattaaatt 43706998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 34258249 - 34258189
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatatta 61  Q
    ||||||||| || |||| | ||||||||||||||||| |||||||||||||||||| ||||    
T  34258249 tctcaaattccagggggcggaatttttcatgaaggtctaaaaccaaaaaatcttcaaatta 34258189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 1572964 - 1573027
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaa 64  Q
    ||||| |||||| | || |||||||| ||| ||||||||||||||||||||||||| |||||||    
T  1572964 tctcagattacatgaggcgaaattttccataaaggtccaaaaccaaaaaatcttcaaattacaa 1573027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 13253581 - 13253711
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc---nnnnnnnttattttaca-ggggg 97  Q
    |||||||||||  | |||||||||| || ||| ||||||||||||||||||||||  ||| || ||||||||||          |||||||||| |||||    
T  13253581 ctcaaattacagagagtgaaattttccacgaacgtccaaaaccaaaaaatcttcaatttataaggatgaaattcaaaaaaaaaattattttacagggggg 13253680  T
Q  98 aaaatcagaaatgacctaaattacaaggggt 128  Q
    ||||  |||||||||||| ||||||||||||    
T  13253681 aaaactagaaatgacctatattacaaggggt 13253711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 13592940 - 13593011
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaat 73  Q
    ||||||||||| ||||  ||||||| |||||||||| ||||| |||||||||||| ||||||| || |||||    
T  13592940 ctcaaattacagggggcaaaattttccatgaaggtctaaaacaaaaaaatcttcaaattacaaggacgaaat 13593011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 30632227 - 30632274
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaa 49  Q
    ||||||||||| |  |||||||||||||||||||||||||||||||||    
T  30632227 ctcaaattacaggaagtgaaatttttcatgaaggtccaaaaccaaaaa 30632274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 151
Target Start/End: Original strand, 45639721 - 45639787
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaat 151  Q
    ||||||||||||||||||  | |||||||||| ||||| ||||| |||||||| ||||||||||||||    
T  45639721 tattttacagggggaaaacaaaaaatgacctatattac-agggggtaaagcaccattaaccctaaaat 45639787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 2240534 - 2240480
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttca 56  Q
    ||||||||| | ||||  |||||||||||||||||| ||||||||||||||||||    
T  2240534 ctcaaattatagggggcaaaatttttcatgaaggtctaaaaccaaaaaatcttca 2240480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 144
Target Start/End: Original strand, 2241112 - 2241230
Alignment:
Q  26 ttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttaca-gggggaaaatcagaaatgacctaaattacaag 124  Q
    ||||||||||||||||||||||||| ||||| ||||||| |||| ||| |         | |||||| ||||||||| | ||||||||||| ||||||||    
T  2241112 ttcatgaaggtccaaaaccaaaaaa-cttcaaattacaaggatggaatccaaaaagaaaaatttacaagggggaaaagcggaaatgacctatattacaag 2241210  T
Q  125 gggttaaagcactattaacc 144  Q
    ||| |||| |||||||||||    
T  2241211 ggggtaaaacactattaacc 2241230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 142
Target Start/End: Original strand, 2301137 - 2301194
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaa 142  Q
    |||||||||||||||||| | ||||||||||| ||||| ||||| ||||||||||||||    
T  2301137 tattttacagggggaaaaccggaaatgacctacattac-agggggtaaagcactattaa 2301194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 146
Target Start/End: Complemental strand, 24374328 - 24374266
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    |||||||||||||||||| |  |||||||||| |||||| |||| |||||||| |||||||||    
T  24374328 tattttacagggggaaaacccaaaatgacctatattacaggggggtaaagcaccattaaccct 24374266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 44448380 - 44448318
Alignment:
Q  86 ttttacaggg-ggaaaatcagaaatgacctaaattacaaggggttaaagcactattaacccta 147  Q
    |||||||||| |||||| |  |||||||||| |||||| ||||||||||||||||||||||||    
T  44448380 ttttacagggtggaaaaccgaaaatgacctatattacagggggttaaagcactattaacccta 44448318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 2624716 - 2624645
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    ||||||||||| ||| ||||||||| |||||||  |||||||||||||||||| | ||||||| ||||||||||    
T  2624716 ctcaaattaca-gggatgaaattttccatgaagc-ccaaaaccaaaaaatctttaaattacaaggatgaaattc 2624645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 146
Target Start/End: Complemental strand, 38193022 - 38192961
Alignment:
Q  85 attttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    ||||||||||| ||||||| ||||||||||| |||||| |||| |||||  |||||||||||    
T  38193022 attttacagggagaaaatcggaaatgacctatattacaggggggtaaagacctattaaccct 38192961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 44412358 - 44412293
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaa 149  Q
    |||||||||||||| ||| || |||||||||| |||||| |||| |||||||| ||||| ||||||    
T  44412358 tattttacaggggggaaaccaaaaatgacctatattacaggggggtaaagcaccattaatcctaaa 44412293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 17051935 - 17051887
Alignment:
Q  26 ttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaatt 74  Q
    ||||||||||||||||| |||||||| |||| ||||||| |||||||||    
T  17051935 ttcatgaaggtccaaaatcaaaaaatattcaaattacaaggatgaaatt 17051887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 147
Target Start/End: Original strand, 19336282 - 19336342
Alignment:
Q  87 tttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaacccta 147  Q
    |||||||||||||||  | |||||||||| |||||| |||| |||||||| ||||||||||    
T  19336282 tttacagggggaaaacaaaaaatgacctatattacaggggggtaaagcaccattaacccta 19336342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 146
Target Start/End: Original strand, 21522026 - 21522146
Alignment:
Q  26 ttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacaggggg-aaaatcagaaatgacctaaattacaag 124  Q
    |||||||||||||||||| ||||||||||||  |||||| || ||||| |        ||||||| |||||  |||||| ||||||||||| |||||| |    
T  21522026 ttcatgaaggtccaaaac-aaaaaatcttcaagttacaaggacgaaatccaaaaaaaatattttataggggataaaatcggaaatgacctatattacagg 21522124  T
Q  125 gggttaaagcactattaaccct 146  Q
    ||| |||| |||||||||||||    
T  21522125 gggataaaacactattaaccct 21522146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 151
Target Start/End: Original strand, 24374497 - 24374565
Alignment:
Q  84 tattttacagggggaaaatcagaaa-tgacctaaattacaaggggttaaagcactattaaccctaaaat 151  Q
    |||||||||||||| ||| || ||| ||||||| |||||| |||| |||||||| ||||||||||||||    
T  24374497 tattttacaggggggaaaacaaaaaatgacctatattacagggggataaagcaccattaaccctaaaat 24374565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 31308083 - 31308155
Alignment:
Q  3 tcaaattacaaggggtgaaatttttcatgaaggtccaaaacc-aaaaaatcttcatattacaatgatgaaatt 74  Q
    |||||||||| || |||||||||||||| ||||| |||| || |||||||||||| ||||||| ||| |||||    
T  31308083 tcaaattacagggagtgaaatttttcattaaggttcaaatccaaaaaaatcttcaaattacaaggataaaatt 31308155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 33441002 - 33440946
Alignment:
Q  8 ttacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaa 64  Q
    ||||| |||| ||||||| ||||||||||||||||||||||||| | || |||||||    
T  33441002 ttacagggggcgaaatttgtcatgaaggtccaaaaccaaaaaatttacaaattacaa 33440946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 8391204 - 8391251
Alignment:
Q  14 ggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatatta 61  Q
    |||| ||||||| |||||||| ||||||||||||||||||||| ||||    
T  8391204 ggggcgaaatttgtcatgaagatccaaaaccaaaaaatcttcaaatta 8391251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 10067984 - 10068047
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaacc-aaaaaatcttcatattacaa 64  Q
    ||||||||||||||||  |  ||||||||||||||| |||||| |||||||||||| |||||||    
T  10067984 ctcaaattacaaggggaaatttttttcatgaaggtctaaaaccaaaaaaatcttcaaattacaa 10068047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 147
Target Start/End: Original strand, 15108321 - 15108384
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaacccta 147  Q
    ||||||||||||||||||  | |||||||||| |||||| | || |||||||| ||||||||||    
T  15108321 tattttacagggggaaaacaaaaaatgacctatattacaggagggtaaagcaccattaacccta 15108384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 147
Target Start/End: Complemental strand, 24478084 - 24478022
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaacccta 147  Q
    ||||||||||||| |||| | ||||||||||| ||||| ||||| |||| ||||||||||||||    
T  24478084 tattttacaggggaaaaaccggaaatgacctatattac-agggggtaaaacactattaacccta 24478022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 146
Target Start/End: Original strand, 1492963 - 1493025
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    ||||||||||||| | || || || ||||||| ||||||||||| |||||||| |||||||||    
T  1492963 tattttacaggggaataaccaaaattgacctatattacaagggggtaaagcaccattaaccct 1493025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 150
Target Start/End: Complemental strand, 28000048 - 27999983
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaa 150  Q
    |||||||||||||| |||| | ||||||||| ||||||| |||  |||||||| |||||||||||||    
T  28000048 tattttacagggggtaaataaaaaatgacct-aattacaggggagtaaagcaccattaaccctaaaa 27999983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 146
Target Start/End: Original strand, 28000115 - 28000176
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    ||||||||||||||||||  | |||||||||| ||||| ||||| |||||||| |||||||||    
T  28000115 tattttacagggggaaaacaaaaaatgacctatattac-agggggtaaagcaccattaaccct 28000176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 146
Target Start/End: Complemental strand, 30335241 - 30335179
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    ||||||||||||||||||  | |||||||||| |||||| |||| |||| ||| |||||||||    
T  30335241 tattttacagggggaaaacaaaaaatgacctatattacaggggggtaaaacaccattaaccct 30335179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 151
Target Start/End: Complemental strand, 45163972 - 45163907
Alignment:
Q  85 attttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaat 151  Q
    ||||||||| |||||||||  |||||||||| ||||||||||| |||||  ||||||||| ||||||    
T  45163972 attttacagtgggaaaatcgaaaatgacctatattacaagggg-taaagacctattaaccttaaaat 45163907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 146
Target Start/End: Original strand, 45633696 - 45633757
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    |||||||||||||| ||| || |||||||||| |||||| |||| |||||||| |||||||||    
T  45633696 tattttacaggggg-aaaccaaaaatgacctatattacatggggataaagcaccattaaccct 45633757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 47370214 - 47370148
Alignment:
Q  84 tattttacaggggg-aaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaa 149  Q
    ||||||| |||||| |||| | ||||||||||| |||||| |||| |||| ||||||||||||||||    
T  47370214 tattttatagggggtaaaaccggaaatgacctatattacagggggctaaaacactattaaccctaaa 47370148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 151
Target Start/End: Original strand, 48741820 - 48741874
Alignment:
Q  97 gaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaat 151  Q
    |||||||||||||||| || |||||| |||   ||||||||||||||||||||||    
T  48741820 gaaaatcagaaatgacatatattacaggggtgaaaagcactattaaccctaaaat 48741874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 64
Target Start/End: Complemental strand, 2514030 - 2513997
Alignment:
Q  31 gaaggtccaaaaccaaaaaatcttcatattacaa 64  Q
    |||||||||||||||||||||||||| |||||||    
T  2514030 gaaggtccaaaaccaaaaaatcttcaaattacaa 2513997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 11576827 - 11576871
Alignment:
Q  26 ttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaa 71  Q
    ||||||||||||||||| ||||||||||||| ||||||| ||||||    
T  11576827 ttcatgaaggtccaaaa-caaaaaatcttcaaattacaaggatgaa 11576871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 15037317 - 15037257
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccc 145  Q
    |||||||||||||||||| | ||||||||| | ||||||||||| |||||  ||||||||||    
T  15037317 tattttacagggggaaaaccggaaatgaccaatattacaagggg-taaagacctattaaccc 15037257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 23784642 - 23784578
Alignment:
Q  86 ttttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaat 151  Q
    |||||||||||||||| ||| ||||||||| ||||| ||||| |||||  ||||||||||| ||||    
T  23784642 ttttacagggggaaaaccagtaatgacctatattac-agggggtaaagacctattaacccttaaat 23784578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 147
Target Start/End: Original strand, 1263940 - 1264004
Alignment:
Q  84 tattttaca-gggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaacccta 147  Q
    ||||||||| |||||||||  | |||||||||| ||||||||||| |||| ||| ||||||||||    
T  1263940 tattttacatgggggaaaacaaaaaatgacctatattacaagggggtaaaacaccattaacccta 1264004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 1853345 - 1853381
Alignment:
Q  28 catgaaggtccaaaaccaaaaaatcttcatattacaa 64  Q
    ||||||||||||||| ||||||||||||| |||||||    
T  1853345 catgaaggtccaaaatcaaaaaatcttcaaattacaa 1853381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 15037411 - 15037467
Alignment:
Q  93 gggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaa 149  Q
    ||||| ||| ||||||||||||| |||||| |||| |||||  ||||||||||||||    
T  15037411 ggggggaaaccagaaatgacctatattacaggggggtaaagacctattaaccctaaa 15037467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 147
Target Start/End: Original strand, 24555901 - 24555960
Alignment:
Q  87 tttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaacccta 147  Q
    |||||||||| |||| ||||||||||||| |||||| ||||| ||| | ||||||||||||    
T  24555901 tttacaggggaaaaaccagaaatgacctatattacagggggtaaaaac-ctattaacccta 24555960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 30335381 - 30335440
Alignment:
Q  86 ttttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    |||||||||||||||| || |||||||||| ||||| ||||| |||||||| || ||||||    
T  30335381 ttttacagggggaaaaccaaaaatgacctatattac-agggggtaaagcaccatcaaccct 30335440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 34436648 - 34436608
Alignment:
Q  106 aaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    ||||||||||||||| | ||||||||| |||||||||||||    
T  34436648 aaatgacctaaattatagggggttaaaacactattaaccct 34436608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 93; Significance: 2e-45; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 22854195 - 22854340
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaa-tcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaa 99  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||       |||||||||||||||||    
T  22854195 tctcaaactacagggggtgaaatttttcatgaaggtccaaaaccaaaaaaatcttcgtattacaaggatgaaattcaaaaaaattattttacagggggaa 22854294  T
Q  100 aatcagaaatgacctaaattacaaggggttaaagcactattaaccc 145  Q
    || |||||||||||||||||||| ||||||||||||||||||||||    
T  22854295 aaccagaaatgacctaaattacagggggttaaagcactattaaccc 22854340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 21508055 - 21508203
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaa 100  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||       |||||||||||||||  |    
T  21508055 tctcaaattacagggggtgaaatttttcatggaggtccaaaaccaaaaaatcttcatattacaaggatgaaattcaaaaaaattattttacaggggg--a 21508152  T
Q  101 atcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaat 151  Q
    | || ||||||||||||||||| ||||||||||||||||||||||| ||||    
T  21508153 accaaaaatgacctaaattacagggggttaaagcactattaacccttaaat 21508203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 41325358 - 41325208
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacag-ggggaa 99  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       |||||||| || ||||||    
T  41325358 tctcaaattacaggaggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaaggatgaaattcaaaaaaattattttatagaggggaa 41325259  T
Q  100 aatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaa 150  Q
    || ||| |||||||||||||||| |||||| ||||||||||||||| ||||    
T  41325258 aaccagtaatgacctaaattacagggggttgaagcactattaacccaaaaa 41325208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 146
Target Start/End: Original strand, 49166876 - 49167021
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttaca-gggggaaa 100  Q
    ||||||||||| || |||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||        ||||||||| ||||||||    
T  49166876 ctcaaattacagggagtgaaattttccatgaaggtccaaaaccaaaaaatcttcaaattacaaggatgaaattcaaaaaaaatattttacaggggggaaa 49166975  T
Q  101 atcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    | | ||||||||||| |||||| |||| |||| |||||||||||||    
T  49166976 accggaaatgacctatattacaggggggtaaaacactattaaccct 49167021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 146
Target Start/End: Original strand, 3652503 - 3652647
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaaa 101  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||        ||||||||||||||||||    
T  3652503 ctcaaattacagggggtaaaattttccatgaaggtccaaaaccaaaaaatcttcaaattacaaggatgaaattcaaaaaaactattttacagggggaaaa 3652602  T
Q  102 tcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
     | |||||||| || |||||| | || ||||  ||||||||||||    
T  3652603 ccggaaatgacttatattacaggagggtaaaagactattaaccct 3652647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 7913258 - 7913118
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttaca-gggggaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||      ||||||||| ||||||||||        ||||||| | |||||||    
T  7913258 tctcaaattacagggggtgaaatttttcatgaaggtccaaaaccaaaaa------atattacaaggatgaaattcaaaaaaaatattttataggggggaa 7913165  T
Q  100 aatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    || || ||||||||||||||||| ||||||||| |||||||||||||    
T  7913164 aaccataaatgacctaaattacagggggttaaaacactattaaccct 7913118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 151
Target Start/End: Original strand, 50719826 - 50719972
Alignment:
Q  5 aaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagg-gggaaaatc 103  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||| || |||| ||||||||||        ||||||||||| ||||||| |    
T  50719826 aaattacagggggtgaaattttccatgaaggtccaaaaccaaaaaatcttcaaataacaaggatgaaattcaaaaaaaatattttacaggagggaaaacc 50719925  T
Q  104 agaaatgacctaaattacaaggggttaaagcactattaaccctaaaat 151  Q
      |||||||||| ||||  ||||| ||||||||||||||||| |||||    
T  50719926 gaaaatgacctatatta-tagggggtaaagcactattaacccaaaaat 50719972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 5514499 - 5514426
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| || ||||||||||    
T  5514499 ctcaaattacaaggggtgaaattttccatgaaggtccaaaaccaaaaaatcttcaaattaaaaggatgaaattc 5514426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 23184954 - 23185027
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaatt 74  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||| |||||||||    
T  23184954 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaaatttcaaattacaaggatgaaatt 23185027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 18510214 - 18510287
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||| ||||||||||    
T  18510214 ctcaaattacaaggggtgaaattttcattgaaggtccaaaaccaaaaaatcttcaaattacaaggatgaaattc 18510287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 29104393 - 29104466
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  29104393 ctcaaattacagggggtaaaattttccatgaaggtccaaaaccaaaaaatcttcaaattacaaggatgaaattc 29104466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 39133315 - 39133388
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||| ||| ||||||||||    
T  39133315 ctcaaattacaaggtgtgaaatttttcatgaaggtctaaaaccaaaaaatcttcaaatttcaaggatgaaattc 39133388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 49296147 - 49296001
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacag-ggggaa 99  Q
    |||||||||||| ||||||||||||| |||||||||| |||||||||||||||||| |||| || || |||||||        |||||||||| ||||||    
T  49296147 tctcaaattacagggggtgaaattttccatgaaggtctaaaaccaaaaaatcttcaaattaaaaggacgaaattcaaaaaaaatattttacagaggggaa 49296048  T
Q  100 aatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    || | ||||||||||| |||||| | |  ||||||||| ||||||||    
T  49296047 aaccggaaatgacctatattacaggagagtaaagcactgttaaccct 49296001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 31226326 - 31226254
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaatt 74  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||| ||| |||||||||    
T  31226326 ctcaaattacagggggtgaaatttttcatgaaagtccaaaaccaaaaaatcttcaaatttcaaggatgaaatt 31226254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 14946188 - 14946315
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaac-caaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaa 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||  |||||||||||| ||| ||| ||||||||||       ||| ||||||||| ||||    
T  14946188 ctcaaattacaaggggtaaaatttttcatgaaggtccaaaacaaaaaaaatcttcaaatttcaaggatgaaattcaaaaaaattagtttacagggagaaa 14946287  T
Q  101 atcagaaatgacctaaattacaaggggt 128  Q
    |||  |||| ||||| |||||| |||||    
T  14946288 atcgaaaataacctatattacagggggt 14946315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 24675478 - 24675552
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    |||||||||||| |||||||||||||||||||| |||||||| ||||||||| ||| ||||||| ||||||||||    
T  24675478 tctcaaattacagggggtgaaatttttcatgaaagtccaaaatcaaaaaatcatcaaattacaaggatgaaattc 24675552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 30919147 - 30919218
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaat 73  Q
    ||||||||||| ||||||||||||| | ||||||||||||||||||||||||||| ||||||| || |||||    
T  30919147 ctcaaattacagggggtgaaattttccgtgaaggtccaaaaccaaaaaatcttcaaattacaaggacgaaat 30919218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 4102987 - 4103061
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    |||||||||| | ||||||||||||| || |||||||||||||||||||||||||| | ||||| ||||||||||    
T  4102987 tctcaaattatagggggtgaaattttccacgaaggtccaaaaccaaaaaatcttcaaaatacaaggatgaaattc 4103061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 150
Target Start/End: Complemental strand, 32681844 - 32681693
Alignment:
Q  3 tcaaattacaagggg-tgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatg-aaattcnnnnnnnttattttacagg-gggaa 99  Q
    ||||||||||||||| ||||||||| |||||||||||||||| |||||||||||| ||| ||| |||| |||||         ||||||||||| |||||    
T  32681844 tcaaattacaagggggtgaaattttccatgaaggtccaaaactaaaaaatcttcaaatttcaaggatgaaaattaaaaaaaaatattttacaggagggaa 32681745  T
Q  100 aatcagaaatgacctaaattacaaggggt-taaagcactattaaccctaaaa 150  Q
    || || ||||| |||| |||||| ||||| |||| |||||||||||||||||    
T  32681744 aaccaaaaatgtcctatattacagggggtgtaaaacactattaaccctaaaa 32681693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 27626901 - 27626972
Alignment:
Q  3 tcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    |||||||||| || |||||||||| ||||||||||||||| ||||||||||||| ||||||| ||||||||||    
T  27626901 tcaaattacagggagtgaaatttt-catgaaggtccaaaagcaaaaaatcttcaaattacaaggatgaaattc 27626972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 32682317 - 32682163
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaa 100  Q
    |||||||||||| ||||  |||||||||||||||||| ||||||||| |||||||| ||||||| || | || ||        ||||||||||| |||||    
T  32682317 tctcaaattaca-ggggcaaaatttttcatgaaggtctaaaaccaaacaatcttcaaattacaaggacggaa-tccaaaaaaatattttacaggaggaaa 32682220  T
Q  101 atcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaatgtatat 157  Q
    | |  |||| ||||| ||||||||||  |||||||||||||||| |||||| |||||    
T  32682219 accgaaaataacctatattacaagggagtaaagcactattaaccataaaatatatat 32682163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 36395460 - 36395405
Alignment:
Q  20 aaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  36395460 aaattttccatgaaggtccaaaaccaaaaaatcttcaaattacaaggatgaaattc 36395405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 12388314 - 12388368
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttca 56  Q
    ||||||||||||||||||||||||| ||||||||||||||||  |||||||||||    
T  12388314 ctcaaattacaaggggtgaaattttccatgaaggtccaaaacttaaaaatcttca 12388368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 147
Target Start/End: Complemental strand, 3652389 - 3652269
Alignment:
Q  26 ttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacaggggg-aaaatcagaaatgacctaaattacaag 124  Q
    |||||||||||||||||||||||| |||||| ||||||| || ||||| |        |||||||||| ||| |||||| ||||||||||||||||| ||    
T  3652389 ttcatgaaggtccaaaaccaaaaa-tcttcaaattacaaggacgaaatccaaaaaatatattttacagagggtaaaatcggaaatgacctaaattac-ag 3652292  T
Q  125 gggttaaagcactattaacccta 147  Q
    ||| |||| ||||||||||||||    
T  3652291 ggggtaaaacactattaacccta 3652269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 146
Target Start/End: Complemental strand, 49166764 - 49166644
Alignment:
Q  26 ttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacaggggg-aaaatcagaaatgacctaaattacaag 124  Q
    |||||||||||||||||||||||| || ||| ||||||| || |||||||        |||||||||||||| |||| | ||||||||||| |||||| |    
T  49166764 ttcatgaaggtccaaaaccaaaaa-tcatcaaattacaaggacgaaattcaaaaaatatattttacagggggtaaaaccggaaatgacctatattacagg 49166666  T
Q  125 gggttaaagcactattaaccct 146  Q
    ||| |||| |||||||||||||    
T  49166665 ggggtaaaacactattaaccct 49166644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 146
Target Start/End: Complemental strand, 13910684 - 13910622
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    |||||||||||||||||| || |||||||||| ||||||||||| |||| ||| |||||||||    
T  13910684 tattttacagggggaaaaccaaaaatgacctatattacaagggggtaaaacaccattaaccct 13910622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 5114278 - 5114351
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    ||||||||||| ||||| ||||||| || |||||| |||||| |||||||||||| |||||||  |||||||||    
T  5114278 ctcaaattacagggggtaaaattttccacgaaggttcaaaactaaaaaatcttcaaattacaagcatgaaattc 5114351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 145
Target Start/End: Original strand, 5401994 - 5402055
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccc 145  Q
    |||||||||||||||||| | ||||||||||| ||||||||||| |||||  ||||||||||    
T  5401994 tattttacagggggaaaaccggaaatgacctatattacaagggggtaaagacctattaaccc 5402055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 13910847 - 13910916
Alignment:
Q  84 tattttacagggg-gaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaatg 152  Q
    ||||||||||||| ||||| || |||||||||| |||||| |||| |||||||| |||||||||||||||    
T  13910847 tattttacaggggagaaaaccaaaaatgacctatattacaggggggtaaagcaccattaaccctaaaatg 13910916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 15786094 - 15786142
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaa 50  Q
    ||||||||||| ||||||||||||| |||||||||||| ||||||||||    
T  15786094 ctcaaattacagggggtgaaattttccatgaaggtccagaaccaaaaaa 15786142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 17696210 - 17696138
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaatt 74  Q
    ||||||||||| || |||||||||| |||||||||| ||||||||||| | |||| ||| ||| |||||||||    
T  17696210 ctcaaattacagggtgtgaaattttccatgaaggtctaaaaccaaaaagttttcaaatttcaaggatgaaatt 17696138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 148
Target Start/End: Original strand, 24670722 - 24670786
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaa 148  Q
    ||||||||||||||||||  | |||||||||| |||||| |||| |||||||| |||||||||||    
T  24670722 tattttacagggggaaaacaaaaaatgacctatattacaggggggtaaagcaccattaaccctaa 24670786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 150
Target Start/End: Original strand, 31226438 - 31226561
Alignment:
Q  26 ttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacaggggg-aaaatcagaaatgacctaaattacaag 124  Q
    |||||||||||||||||||||||| |||||| ||||||  || ||||| |        |||||||||||||| |||| | ||||||||||| |||||| |    
T  31226438 ttcatgaaggtccaaaaccaaaaa-tcttcaaattacagggacgaaatccaaaaaaaatattttacagggggtaaaaccggaaatgacctatattacagg 31226536  T
Q  125 gggttaaagcactattaaccctaaaa 150  Q
    |||| ||| |||||||||||||||||    
T  31226537 gggtaaaa-cactattaaccctaaaa 31226561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 151
Target Start/End: Original strand, 34853350 - 34853418
Alignment:
Q  84 tattttacagg-gggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaat 151  Q
    ||||||||||| ||||||| || |||||||||| ||||||||||| |||||||| |||||||| |||||    
T  34853350 tattttacaggagggaaaaccaaaaatgacctatattacaagggggtaaagcaccattaacccaaaaat 34853418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 25244535 - 25244464
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaat 73  Q
    ||||||||||| ||||  ||| |||||||||||||| ||||| |||||||||||| ||||||| || |||||    
T  25244535 ctcaaattacagggggcaaaaattttcatgaaggtctaaaacaaaaaaatcttcaaattacaaggacgaaat 25244464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 14121391 - 14121329
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaa 64  Q
    ||||||||||| ||||  |||||||||||||||||| |||| ||||||||||| | |||||||    
T  14121391 ctcaaattacagggggcaaaatttttcatgaaggtctaaaatcaaaaaatcttgaaattacaa 14121329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 146
Target Start/End: Original strand, 28292280 - 28292341
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    ||||||||||||||||||| | |||||||||| ||||||||||| ||||||||  ||||||||    
T  28292280 tattttacagggggaaaataaaaaatgacctatattacaagggg-taaagcaccgttaaccct 28292341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 16589227 - 16589272
Alignment:
Q  19 gaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaa 64  Q
    ||||||| |||||||||||||||| ||||||||||||| |||||||    
T  16589227 gaaatttgtcatgaaggtccaaaatcaaaaaatcttcaaattacaa 16589272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 17251495 - 17251548
Alignment:
Q  20 aaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaat 73  Q
    |||| ||||||||||||| |||||||||||||||||| ||||||| || |||||    
T  17251495 aaatatttcatgaaggtctaaaaccaaaaaatcttcaaattacaaggacgaaat 17251548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 146
Target Start/End: Original strand, 18165204 - 18165265
Alignment:
Q  85 attttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    ||||||||||||||| | | ||||||||| | |||||| |||| ||||||||||||||||||    
T  18165204 attttacagggggaataccggaaatgaccaatattacaggggggtaaagcactattaaccct 18165265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 146
Target Start/End: Original strand, 18320693 - 18320754
Alignment:
Q  85 attttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    ||||||||||||||||| | ||||||||||| |||||| |||| |||||  |||||||||||    
T  18320693 attttacagggggaaaaccggaaatgacctatattacaggggggtaaagacctattaaccct 18320754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 31110313 - 31110248
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaa 149  Q
    ||||||||||||||||||  | |||||||||| |||||| |||| |||| ||| ||||||||||||    
T  31110313 tattttacagggggaaaacaaaaaatgacctatattacaggggggtaaaacaccattaaccctaaa 31110248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 31857122 - 31857195
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    ||||||||||| ||| ||||||||| |   |||||||||||||||||| | |||| ||||||| ||||||||||    
T  31857122 ctcaaattacaggggatgaaattttccgctaaggtccaaaaccaaaaatttttcaaattacaaggatgaaattc 31857195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 50604015 - 50603942
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    ||||||||||  || |||||||||| |||||||||  |||||||||||||||| | |||| || ||||||||||    
T  50604015 ctcaaattaccgggagtgaaattttccatgaaggtttaaaaccaaaaaatctttaaattataaggatgaaattc 50603942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 50773520 - 50773593
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    ||||||||| | ||||||||||||| | ||||||||||||| ||||||||| ||| ||| ||| ||| ||||||    
T  50773520 ctcaaattatacggggtgaaattttccgtgaaggtccaaaatcaaaaaatcatcaaatttcaaggattaaattc 50773593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 5114176 - 5114129
Alignment:
Q  26 ttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaat 73  Q
    |||||||| || ||||||||||||||||||| ||||||| ||||||||    
T  5114176 ttcatgaatgttcaaaaccaaaaaatcttcaaattacaaggatgaaat 5114129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 145
Target Start/End: Original strand, 14574840 - 14574984
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacaggg-ggaaa 100  Q
    |||||||||||  | |||||||||| ||||||| || |||| ||||||||||||| || | || ||||||||||        |||||||||||| |||||    
T  14574840 ctcaaattacagagagtgaaattttccatgaagttcgaaaaacaaaaaatcttcaaatcataaggatgaaattcaaaaaaaatattttacagggaggaaa 14574939  T
Q  101 atcagaaatgacctaaattacaaggggttaaagcactattaaccc 145  Q
    | |  |||| ||||| |||||| | || |||| ||||||||||||    
T  14574940 accgaaaataacctatattacaggaggataaaacactattaaccc 14574984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 26040763 - 26040810
Alignment:
Q  26 ttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaat 73  Q
    |||||||||||||||||| |||||||||||| ||||||| || |||||    
T  26040763 ttcatgaaggtccaaaacaaaaaaatcttcaaattacaaggacgaaat 26040810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 29104279 - 29104232
Alignment:
Q  26 ttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaat 73  Q
    |||||||||||| |||||||||||||||||| ||||||| || |||||    
T  29104279 ttcatgaaggtctaaaaccaaaaaatcttcaaattacaaggacgaaat 29104232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 151
Target Start/End: Original strand, 46360890 - 46360956
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaat 151  Q
    ||||||||||||||||||  | |||||||||| ||||| ||||| |||||||| ||||||||| ||||    
T  46360890 tattttacagggggaaaacaaaaaatgacctatattac-agggggtaaagcaccattaacccttaaat 46360956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 146
Target Start/End: Complemental strand, 20514716 - 20514654
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    |||||||||||||||||| || |||||||||| ||||||  ||| |||| ||| |||||||||    
T  20514716 tattttacagggggaaaaccaaaaatgacctatattacagaggggtaaaacaccattaaccct 20514654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 146
Target Start/End: Complemental strand, 22854023 - 22853961
Alignment:
Q  85 attttacagggggaaaatcagaaa-tgacctaaattacaaggggttaaagcactattaaccct 146  Q
    ||||||||||||| ||| | |||| ||||||| ||||||||||| |||| |||||||||||||    
T  22854023 attttacagggggtaaaaccgaaaatgacctatattacaagggggtaaaacactattaaccct 22853961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 148
Target Start/End: Complemental strand, 34025973 - 34025911
Alignment:
Q  86 ttttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaa 148  Q
    ||||||||||| |||| || || ||||||| ||||||||||| |||||  |||||||||||||    
T  34025973 ttttacaggggcaaaaccaaaagtgacctatattacaagggggtaaaggtctattaaccctaa 34025911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 147
Target Start/End: Complemental strand, 36405718 - 36405657
Alignment:
Q  85 attttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaacccta 147  Q
    |||||||||||||||||  | |||||||||| ||||| ||||| |||||||| ||||||||||    
T  36405718 attttacagggggaaaactaaaaatgacctatattac-agggggtaaagcaccattaacccta 36405657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 146
Target Start/End: Original strand, 36405850 - 36405911
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    ||||||||||||| |||| || |||||||||| ||||| ||||| |||||||| |||||||||    
T  36405850 tattttacaggggaaaaaccaaaaatgacctatattac-agggggtaaagcaccattaaccct 36405911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 49300967 - 49301029
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaa 64  Q
    ||||||||||| ||||  ||||||||| |||||||| ||||  |||||||||||| |||||||    
T  49300967 ctcaaattacagggggccaaatttttcgtgaaggtctaaaataaaaaaatcttcaaattacaa 49301029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 9780544 - 9780581
Alignment:
Q  26 ttcatgaaggtccaaaaccaaaaaatcttcatattaca 63  Q
    |||||||||||||||||||||| |||||||| ||||||    
T  9780544 ttcatgaaggtccaaaaccaaataatcttcaaattaca 9780581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 144
Target Start/End: Complemental strand, 13334884 - 13334823
Alignment:
Q  84 tattttacaggggg-aaaatcagaaatgacctaaattacaaggggttaaagcactattaacc 144  Q
    |||||||||||||| |||| ||||||||||||| |||||| |||| |||||  |||||||||    
T  13334884 tattttacaggggggaaaaccagaaatgacctatattacaggggggtaaagacctattaacc 13334823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 128
Target Start/End: Original strand, 13780409 - 13780454
Alignment:
Q  83 ttattttacagggggaaaatcagaaatgacctaaattacaaggggt 128  Q
    |||||||||||| |||||||| ||||||||||| |||||| |||||    
T  13780409 ttattttacaggaggaaaatcggaaatgacctatattacatggggt 13780454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 15782323 - 15782259
Alignment:
Q  84 tattttacagggggaaaatcagaaa-tgacctaaattacaaggggttaaagcactattaaccctaa 148  Q
    |||||||||||||| ||| || ||| ||||||| ||||||||||| |||||||| |||||||||||    
T  15782323 tattttacaggggggaaaacaaaaaatgacctatattacaagggg-taaagcaccattaaccctaa 15782259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 147
Target Start/End: Complemental strand, 5401823 - 5401759
Alignment:
Q  84 tattttacagg-gggaaaatcagaaatgacctaaattacaaggggttaaagcactattaacccta 147  Q
    ||||||||||| |||||||||  |||||||||| |||||| |||| |||||  ||||||||||||    
T  5401823 tattttacaggagggaaaatcgaaaatgacctatattacaggggggtaaagacctattaacccta 5401759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 148
Target Start/End: Complemental strand, 21798389 - 21798329
Alignment:
Q  89 tacaggggg-aaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaa 148  Q
    ||||||||| |||| ||||||||||||| |||||| |||| |||||  |||||||||||||    
T  21798389 tacagggggtaaaaccagaaatgacctatattacaggggggtaaagacctattaaccctaa 21798329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 146
Target Start/End: Complemental strand, 50084885 - 50084821
Alignment:
Q  83 ttattttacagggggaaaatcagaaatgacctaaattacaag-gggttaaagcactattaaccct 146  Q
    ||||||| |||||||||||| | |||||||||| |||||| | ||| |||||||| |||||||||    
T  50084885 ttattttgcagggggaaaataaaaaatgacctatattacaggaggggtaaagcaccattaaccct 50084821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 51353439 - 51353490
Alignment:
Q  93 gggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccc 145  Q
    ||||||||| ||||||||||||| ||||| ||||| |||| ||||||||||||    
T  51353439 gggggaaaaccagaaatgacctatattac-agggggtaaatcactattaaccc 51353490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 90; Significance: 1e-43; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 6284322 - 6284180
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttaca-gggggaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       |||||||| | |||||||    
T  6284322 tctcaaattacagggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaaggatgaaattcaaaaaaattattttataggggggaa 6284223  T
Q  100 aatcagaaatgacctaaattacaaggggttaaagcactattaa 142  Q
    || |||||||||||||||||||| ||| |||||||||||||||    
T  6284222 aaccagaaatgacctaaattacaggggattaaagcactattaa 6284180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 9209806 - 9209950
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttaca-gggggaa 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||       |||||||||| |||||||    
T  9209806 tctcaaattacagggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattatatggatgaaattcaaaaaaattattttacaggggggaa 9209905  T
Q  100 aatcagaaatgacctaaattacaaggggttaaagcactattaacc 144  Q
    || |||||||||||||||||||| |||||| ||||||||||||||    
T  9209906 aaccagaaatgacctaaattacagggggttgaagcactattaacc 9209950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 26399000 - 26398856
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaa 100  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||        ||||||||||| ||||||    
T  26399000 tctcaaattacagggggtgaaatttttcatgaaggttcaaaaccaaaaaatcttcatattacaaggatgaaatt-gaaaaaattattttacagagggaaa 26398902  T
Q  101 atcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    | || ||||||||||||||||| | |||||||||||||||||||||    
T  26398901 accaaaaatgacctaaattacatgaggttaaagcactattaaccct 26398856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 5457311 - 5457454
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaa 100  Q
    ||||||||||   ||||||||||||||||| |||||| ||||||||||||||||||||||||||  |||||||||       |||||||||| |||| ||    
T  5457311 tctcaaattattgggggtgaaatttttcataaaggtctaaaaccaaaaaatcttcatattacaagaatgaaattcaaaaaaattattttacaagggggaa 5457410  T
Q  101 atcagaaatgacctaaattacaaggggttaaagcactattaaccc 145  Q
    | ||||||||||||||||||| ||| |||||||||||||||||||    
T  5457411 accagaaatgacctaaattac-aggagttaaagcactattaaccc 5457454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 20158796 - 20158653
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttac-agggggaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||       ||||||||| ||||| ||    
T  20158796 tctcaaattacagggggtgaaatttttcatgaaggtccaaaaccaaaaaatcatcatattacaaggatgaaattcaaaaaaattattttacaaggggtaa 20158697  T
Q  100 aatcagaaatgacctaaattacaaggggttaaagcactattaacc 144  Q
    ||  | ||||||| |||||||| |||||||||| |||||||||||    
T  20158696 aacaaaaaatgacataaattac-aggggttaaaacactattaacc 20158653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 21770954 - 21771099
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaa 100  Q
    |||||||||||| || | |||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||        |||||||||||||| ||    
T  21770954 tctcaaattacatggagcgaaattttccatgaaggtccaaaaccaaaaaatcttcaaattacaaggatgaaattcaaaaaaaatattttacaggggggaa 21771053  T
Q  101 atcagaaatgacctaaattacaaggggttaaagcactattaacccta 147  Q
    | | ||||||||||| ||||| ||||| |||||||||||||||||||    
T  21771054 accggaaatgacctatattac-agggggtaaagcactattaacccta 21771099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 142
Target Start/End: Original strand, 31883692 - 31883830
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaaa 101  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| ||||||||||       ||||||||||  |||||||    
T  31883692 ctcaaattacaaggggtgaaattttccatgaaggtccaaaaccaaaaaatctttaaattacaaggatgaaattcaaaataattattttacaaagggaaaa 31883791  T
Q  102 tcagaaatgacctaaattacaaggggttaaagcactattaa 142  Q
     || ||||||| || ||||||  ||| |||| |||||||||    
T  31883792 ccaaaaatgacatatattaca--ggggtaaaacactattaa 31883830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 147
Target Start/End: Original strand, 5932194 - 5932339
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttaca-gggggaaa 100  Q
    ||||||||||||| ||| ||||||| ||||||||||||||||||||||||||| | ||||||| ||||||||||        ||||||||| ||||||||    
T  5932194 ctcaaattacaagaggtaaaattttccatgaaggtccaaaaccaaaaaatctttaaattacaaggatgaaattcaaaaaaactattttacaggggggaaa 5932293  T
Q  101 atcagaaatgacctaaattacaaggggttaaagcactattaacccta 147  Q
    | | |||||||| || |||| | ||||| |||| |||||||||||||    
T  5932294 accggaaatgacttatattatagggggtaaaag-actattaacccta 5932339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 19967794 - 19967867
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    ||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||| ||||||| ||||||||||    
T  19967794 ctcaaattacaagggctgaaattttccatgaaggtccaaaatcaaaaaatcttcaaattacaaggatgaaattc 19967867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 44961236 - 44961309
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    ||||||||||| ||||||||||||| | ||||||||||||||||||||||||||| ||||||| ||||||||||    
T  44961236 ctcaaattacagggggtgaaattttccgtgaaggtccaaaaccaaaaaatcttcaaattacaaggatgaaattc 44961309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 27666148 - 27666221
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||| ||||||| | ||||||||    
T  27666148 ctcaaattacagggggtaaaattttccatgaaggtccaaaaccaaaaaatcttcaaattacaagggtgaaattc 27666221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 146
Target Start/End: Original strand, 27815225 - 27815283
Alignment:
Q  88 ttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    |||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||    
T  27815225 ttacagggggaaaaccagaaatgacctaaattacagggagttaaagcactattaaccct 27815283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 22387275 - 22387161
Alignment:
Q  14 ggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaaatcagaaatgacc 113  Q
    ||||| ||||||| ||||||||||||||||||||||||||||| |||||||  |||||||||        ||||||||| |||||||| |  ||||||||    
T  22387275 ggggtaaaattttccatgaaggtccaaaaccaaaaaatcttcaaattacaagaatgaaattcaaaaaaaatattttacaaggggaaaaccgaaaatgacc 22387176  T
Q  114 taaattacaaggggt 128  Q
    || |||||| |||||    
T  22387175 tatattacagggggt 22387161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 26190962 - 26191035
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    ||||||||||| ||||| ||||||| ||||||||||||||| ||||||||||||| |||| || ||||||||||    
T  26190962 ctcaaattacagggggtaaaattttccatgaaggtccaaaatcaaaaaatcttcaaattataaggatgaaattc 26191035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 46528903 - 46528830
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    ||||||||||| |||||||||||||  ||||||||| ||||| |||||||||||| ||||||| ||||||||||    
T  46528903 ctcaaattacagggggtgaaattttctatgaaggtctaaaacaaaaaaatcttcaaattacaaggatgaaattc 46528830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 150
Target Start/End: Complemental strand, 21853703 - 21853555
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttaca-gggggaaa 100  Q
    ||||||||||| ||||  | |||||||||||||||| |||||||||||||||||| ||||||| || | ||| |        ||||||||| ||||||||    
T  21853703 ctcaaattacagggggcaacatttttcatgaaggtctaaaaccaaaaaatcttcaaattacaaggacggaatccaaaaaaaatattttacatgggggaaa 21853604  T
Q  101 atcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaa 150  Q
    | | ||||||||||| ||||  ||||| |||| |||||||||||| ||||    
T  21853603 accggaaatgacctatatta-tagggggtaaaacactattaacccaaaaa 21853555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 146
Target Start/End: Complemental strand, 26190849 - 26190729
Alignment:
Q  26 ttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaaatcagaaa-tgacctaaattacaag 124  Q
    |||||||||||||||||||||||| |||||| ||||||| ||  |||| |       ||||||||||||||| ||| | |||| ||||||| ||||||||    
T  26190849 ttcatgaaggtccaaaaccaaaaa-tcttcaaattacaaggacaaaatccaaaaaatttattttacagggggtaaaaccgaaaatgacctatattacaag 26190751  T
Q  125 gggttaaagcactattaaccct 146  Q
    ||| |||| |||||||||||||    
T  26190750 ggggtaaaacactattaaccct 26190729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 146
Target Start/End: Original strand, 37356265 - 37356326
Alignment:
Q  85 attttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    ||||||||||||||||| || |||||||||| |||||||| || |||||||| |||||||||    
T  37356265 attttacagggggaaaaccataaatgacctatattacaagagggtaaagcaccattaaccct 37356326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 14909904 - 14909833
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaat 73  Q
    ||||||||||| ||||  |||||||||||||||||| ||||||||| |||||||| | ||||| || |||||    
T  14909904 ctcaaattacagggggcaaaatttttcatgaaggtctaaaaccaaataatcttcaaactacaaggacgaaat 14909833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 147
Target Start/End: Original strand, 16421113 - 16421258
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttatttt-acaggg-ggaa 99  Q
    ||||||| ||||||||  ||||||  ||||||||| ||||||||||||||||||| ||||||| || ||||  |         ||||| |||||| ||||    
T  16421113 ctcaaatgacaagggggaaaatttgccatgaaggttcaaaaccaaaaaatcttcaaattacaaggacgaaaaccaaacaaaaaattttaacagggtggaa 16421212  T
Q  100 aatcagaaatgacctaaattacaaggggttaaagcactattaacccta 147  Q
    || ||||||||||||| ||||||||||||  || ||||||||||||||    
T  16421213 aaccagaaatgacctatattacaaggggt--aaacactattaacccta 16421258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 50345037 - 50344995
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaac 43  Q
    |||||||||||| |||||||||||| |||||||||||||||||    
T  50345037 tctcaaattacagggggtgaaatttgtcatgaaggtccaaaac 50344995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 21770873 - 21770748
Alignment:
Q  26 ttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaaatcagaaat-gacctaaattacaag 124  Q
    ||||||||||  |||||||||||| |||||| ||||||| || ||||| |       ||||||||||||||| ||| | | ||| |||||| |||||| |    
T  21770873 ttcatgaaggcacaaaaccaaaaa-tcttcaaattacaaggacgaaatccaaaaaaattattttacagggggtaaaaccggaatcgacctatattacagg 21770775  T
Q  125 gggttaaagcactattaaccctaaaat 151  Q
    ||| |||| ||||||||||||||||||    
T  21770774 ggggtaaaacactattaaccctaaaat 21770748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 23889737 - 23889673
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaa 149  Q
    |||||||||||||||||| | ||||||||||| ||||| ||||| ||||||||  |||||||||||    
T  23889737 tattttacagggggaaaaccggaaatgacctatattac-agggggtaaagcacctttaaccctaaa 23889673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 151
Target Start/End: Complemental strand, 31883515 - 31883447
Alignment:
Q  83 ttattttacaggggg-aaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaat 151  Q
    ||||||||||| ||| ||||||||||||||| || |||||| ||||| ||| ||||||||||||||||||    
T  31883515 ttattttacagtgggtaaaatcagaaatgacatatattacagggggtaaaa-cactattaaccctaaaat 31883447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 15336634 - 15336570
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaac-caaaaaatcttcatattacaa 64  Q
    |||||||||||| |||| |||||||  ||||||||||||||||  |||||||||||| |||||||    
T  15336634 tctcaaattacagggggcgaaatttgccatgaaggtccaaaacaaaaaaaatcttcaaattacaa 15336570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 151
Target Start/End: Complemental strand, 42736678 - 42736608
Alignment:
Q  84 tattttacaggggg---aaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaat 151  Q
    ||||||||||||||   |||||||||||||||||| |||||| |||| |||||   |||||||||||||||    
T  42736678 tattttacagggggtggaaaatcagaaatgacctatattacaggggggtaaagacttattaaccctaaaat 42736608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 47979939 - 47979891
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaa 50  Q
    ||||||||||| ||||||| |||||||||||||||| ||||| ||||||    
T  47979939 ctcaaattacagggggtgagatttttcatgaaggtcaaaaacaaaaaaa 47979891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 50721781 - 50721718
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaa 148  Q
    |||||||||||||||||| || |||||||||| | |||| |||| |||||||| |||||||||||    
T  50721781 tattttacagggggaaaaccaaaaatgacctata-tacaggggggtaaagcaccattaaccctaa 50721718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 146
Target Start/End: Original strand, 8620192 - 8620251
Alignment:
Q  87 tttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    ||||||||||||||| | ||||||||||| |||||| |||| |||||  |||||||||||    
T  8620192 tttacagggggaaaaccggaaatgacctatattacaggggggtaaagatctattaaccct 8620251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 150
Target Start/End: Complemental strand, 24004581 - 24004514
Alignment:
Q  84 tattttacaggg-ggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaa 150  Q
    |||||||||||| ||||||  | |||||||||| |||||| |||||||||| || |||||||||||||    
T  24004581 tattttacagggaggaaaacaaaaaatgacctatattacagggggttaaagaaccattaaccctaaaa 24004514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 150
Target Start/End: Complemental strand, 24730118 - 24730051
Alignment:
Q  84 tattttacagggggaaaatc-agaaatgacctaaattacaaggggttaaagcactattaaccctaaaa 150  Q
    |||||||||||| ||||| | | |||||||||| |||||| |||| |||||||| |||||||||||||    
T  24730118 tattttacagggagaaaaaccaaaaatgacctatattacaggggggtaaagcaccattaaccctaaaa 24730051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 15961646 - 15961580
Alignment:
Q  84 tattttacagggg-gaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaa 149  Q
    ||||||||||||| ||||| || | |||||||| |||||| |||| |||||||| ||||||||||||    
T  15961646 tattttacaggggagaaaaccaaatatgacctatattacaggggggtaaagcaccattaaccctaaa 15961580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 146
Target Start/End: Original strand, 26486770 - 26486827
Alignment:
Q  88 ttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    ||||||||||||||| | |||||||||| ||||| ||||| |||||||| |||||||||    
T  26486770 ttacagggggaaaataaaaaatgacctatattac-agggggtaaagcaccattaaccct 26486827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 146
Target Start/End: Complemental strand, 39160494 - 39160433
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    |||||||||||||||||| || |||||||||| || || ||||| |||||||| |||||||||    
T  39160494 tattttacagggggaaaaccaaaaatgacctatatgac-agggggtaaagcaccattaaccct 39160433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 146
Target Start/End: Complemental strand, 52413181 - 52413120
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    |||||||||||||| ||| || |||||||||| ||||| ||||| |||||||| |||||||||    
T  52413181 tattttacaggggggaaaccaaaaatgacctatattac-agggggtaaagcaccattaaccct 52413120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 2059422 - 2059467
Alignment:
Q  84 tattttacagg-gggaaaatcagaaatgacctaaattacaaggggt 128  Q
    ||||||||||| ||||||||||||||||||||| |||||| |||||    
T  2059422 tattttacaggagggaaaatcagaaatgacctatattacagggggt 2059467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 2472437 - 2472385
Alignment:
Q  97 gaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaa 150  Q
    ||||| ||||||||||||| |||||| ||||||||||  |||||||||||||||    
T  2472437 gaaaaccagaaatgacctatattaca-ggggttaaagacctattaaccctaaaa 2472385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 146
Target Start/End: Original strand, 15790470 - 15790531
Alignment:
Q  85 attttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    ||||||||||| ||||| ||||||||||||| |||||| |||| | |||  |||||||||||    
T  15790470 attttacagggtgaaaaccagaaatgacctatattacaggggggtcaagacctattaaccct 15790531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 146
Target Start/End: Original strand, 16699102 - 16699163
Alignment:
Q  85 attttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    ||||||| |||| |||| ||||||||||||| ||||| ||||| |||||  |||||||||||    
T  16699102 attttaccggggaaaaaccagaaatgacctatattaccagggggtaaagacctattaaccct 16699163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 40091528 - 40091467
Alignment:
Q  88 ttacaggggg-aaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaa 148  Q
    |||||||||| |||| | |||||||| || |||||| |||| ||||||||||||||||||||    
T  40091528 ttacagggggtaaaagcggaaatgacatatattacaggggggtaaagcactattaaccctaa 40091467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 190
Target Start/End: Complemental strand, 48526909 - 48526868
Alignment:
Q  149 aatgtatattatacacatgatttactttgaccatatttttaa 190  Q
    |||||| |||||  ||||||||||||||||||||||||||||    
T  48526909 aatgtacattatttacatgatttactttgaccatatttttaa 48526868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 50879883 - 50879822
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccc 145  Q
    ||||||||||||| ||||| | |||||||||| ||||||  ||| |||||||| ||||||||    
T  50879883 tattttacaggggaaaaataaaaaatgacctatattacagaggggtaaagcaccattaaccc 50879822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 21853476 - 21853432
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggt 128  Q
    ||||||||||| |||||| ||||||||||||| |||||| |||||    
T  21853476 tattttacaggaggaaaaccagaaatgacctatattacagggggt 21853432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 22152007 - 22151971
Alignment:
Q  27 tcatgaaggtccaaaaccaaaaaatcttcatattaca 63  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  22152007 tcatgaaggtccaaaacaaaaaaatcttcaaattaca 22151971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 159
Target Start/End: Original strand, 22604658 - 22604733
Alignment:
Q  84 tattttacagggggaaaatcag-aaatgacctaaattacaaggggttaaagcactattaaccctaaaatgtatatta 159  Q
    ||||||||||||| |||| | | |||||||||| |||||| ||||||||||  |||||||||||||| | |||||||    
T  22604658 tattttacaggggaaaaaaccggaaatgacctatattaca-ggggttaaagacctattaaccctaaattttatatta 22604733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 149
Target Start/End: Original strand, 27794591 - 27794655
Alignment:
Q  85 attttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaa 149  Q
    ||||||||||||||||| |||||||||  || |||||| || | |||||  ||||||||||||||    
T  27794591 attttacagggggaaaaccagaaatgatttatattacagggaggtaaagacctattaaccctaaa 27794655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 30147104 - 30147064
Alignment:
Q  106 aaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    |||||||||| ||||||||||| |||| |||||||||||||    
T  30147104 aaatgacctatattacaagggggtaaaacactattaaccct 30147064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 145
Target Start/End: Original strand, 42736819 - 42736878
Alignment:
Q  85 attttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccc 145  Q
    ||||||||||||||||| | ||||||||||| ||||| ||||| |||||  ||||||||||    
T  42736819 attttacagggggaaaaccggaaatgacctatattac-aggggataaagacctattaaccc 42736878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 147
Target Start/End: Complemental strand, 46208261 - 46208197
Alignment:
Q  84 tattttacagggggaaaatc-agaaatgacctaaattacaaggggttaaagcactattaacccta 147  Q
    |||||||||||||||||| | | |||||||||| |||||| || | |||||||| ||||||||||    
T  46208261 tattttacagggggaaaaacaaaaaatgacctatattacagggaggtaaagcaccattaacccta 46208197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 142
Target Start/End: Original strand, 12699 - 12839
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaaa 101  Q
    ||||||||||| ||||||||||||| | ||||||||||||||||||||||||||| ||||||| ||||||| ||        ||||||||||||||||||    
T  12699 ctcaaattacagggggtgaaattttccgtgaaggtccaaaaccaaaaaatcttcaaattacaaggatgaaactcaacaaaaatattttacagggggaaaa 12798  T
Q  102 tcagaaatgacctaaattacaaggggttaaagcactattaa 142  Q
    || |||||||||||||||||||||||  ||| |||||||||    
T  12799 tcggaaatgacctaaattacaaggggaaaaaacactattaa 12839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 147
Target Start/End: Complemental strand, 63175 - 63029
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttaca-gggggaaa 100  Q
    ||||||||||| || |||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||        ||||||||| ||||||||    
T  63175 ctcaaattacagggagtgaaattttccatgaaggtccaaaaccaaaaaatcttcaaattacaaggatgaaattcaaaaaaaatattttacaggggggaaa 63076  T
Q  101 atcagaaatgacctaaattacaaggggttaaagcactattaacccta 147  Q
    | | ||||||||||| |||||| |||| |||||||||||||||||||    
T  63075 accggaaatgacctatattacaggggggtaaagcactattaacccta 63029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 2e-33; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 150
Target Start/End: Original strand, 300399 - 300548
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacaggggg-aaa 100  Q
    ||||||||||| || |||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||        |||||||||||||| |||    
T  300399 ctcaaattacagggagtgaaattttccatgaaggtccaaaaccaaaaaatcttcaaattacaaggatgaaattcaaaaaaaatattttacagggggaaaa 300498  T
Q  101 atcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaa 150  Q
    | | ||||||||||| |||||| |||| |||| |||||||||||||||||    
T  300499 accggaaatgacctatattacaggggggtaaaacactattaaccctaaaa 300548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 14004362 - 14004227
Alignment:
Q  14 ggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaaatcagaaatgacc 113  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||        ||||||||| |||||||| | ||||||||     
T  14004362 ggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcaaatttcaaggatgaaattccaaaaaaatattttacaaggggaaaaccggaaatgaca 14004263  T
Q  114 taaattacaaggggttaaagcactattaaccctaaa 149  Q
    || ||||||  ||| |||||||||||||||||||||    
T  14004262 tatattacagcggggtaaagcactattaaccctaaa 14004227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 147
Target Start/End: Complemental strand, 19111085 - 19110940
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaaa 101  Q
    ||||||||||| ||||||||||||||| |||||||||||||  |||||||||||| ||||||| ||||||||||        ||||||||||||||||||    
T  19111085 ctcaaattacagggggtgaaatttttcttgaaggtccaaaataaaaaaatcttcaaattacaaggatgaaattcaaaaaacatattttacagggggaaaa 19110986  T
Q  102 tcagaaatgacctaaattacaaggggttaaagcactattaacccta 147  Q
     | |||||||| || |||||| | || |||| ||||||||||||||    
T  19110985 ccggaaatgacttatattacaggagggtaaaacactattaacccta 19110940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 145
Target Start/End: Complemental strand, 52839442 - 52839298
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttaca-gggggaaa 100  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||        ||||||||| ||||||||    
T  52839442 ctcaaattacagggggtaaaattttccatgaaggtccaaaaccaaaaaatcttcaaattacaaggatgaaattcaaaaaaactattttacaggggggaaa 52839343  T
Q  101 atcagaaatgacctaaattacaaggggttaaagcactattaaccc 145  Q
    ||| |||||||| || |||||| |||| ||||  |||||||||||    
T  52839342 atcggaaatgacttatattacaggggggtaaaagactattaaccc 52839298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 147
Target Start/End: Complemental strand, 3505144 - 3505000
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaaa 101  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||| ||||||||||        ||||||||| ||  ||||    
T  3505144 ctcaaattacaaggggtgaaattttccatggaggtccaaaaccaaaaaatcttcaaattacaaggatgaaattcaaaaaaaatattttacaaggaaaaaa 3505045  T
Q  102 tcagaaatgacctaaattacaaggggttaaagcactattaacccta 147  Q
     |  ||||| |||| ||||||||||| |||| ||||||||||||||    
T  3505044 ccgcaaatggcctatattacaagggg-taaaacactattaacccta 3505000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 14220514 - 14220440
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||    
T  14220514 tctcaaattacagggggtgaaatttttcatgaaggtccaaaaccaaaaaaatttcatattacaaggatgaaattc 14220440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 14224741 - 14224667
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||    
T  14224741 tctcaaattacagggggtgaaatttttcatgaaggtccaaaaccaaaaaaatttcatattacaaggatgaaattc 14224667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 122
Target Start/End: Complemental strand, 14870075 - 14869954
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggg-gaaa 100  Q
    ||||||||||| |||||||||||||||| |||||| ||||||||||||||||||| ||||||| ||||||||||        ||||||||||||| ||||    
T  14870075 ctcaaattacagggggtgaaatttttcacgaaggttcaaaaccaaaaaatcttcaaattacaaggatgaaattcaaacaaaatattttacaggggtgaaa 14869976  T
Q  101 atcagaaatgacctaaattaca 122  Q
    || | |||||||||| ||||||    
T  14869975 ataaaaaatgacctatattaca 14869954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 145
Target Start/End: Complemental strand, 5572096 - 5571952
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggg-gaaa 100  Q
    ||||||||||| |||||||||||||  |||||||| ||||||||||||||||||| ||| ||| ||||||||||        ||||||||||||| ||||    
T  5572096 ctcaaattacagggggtgaaattttctatgaaggttcaaaaccaaaaaatcttcaaatttcaaggatgaaattcaaaaaaaatattttacaggggcgaaa 5571997  T
Q  101 atcagaaatgacctaaattacaaggggttaaagcactattaaccc 145  Q
    | |  |||||||||| |||||| |||| |||| || |||||||||    
T  5571996 accgaaaatgacctatattacagggggataaaacattattaaccc 5571952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 14154921 - 14154850
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaat 73  Q
    ||||||||| | |||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||    
T  14154921 ctcaaattatagggggtgaaatttttcatgaaggtctaaaaccaaaaaatcttcaaattacaaggatgaaat 14154850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 132
Target Start/End: Complemental strand, 13041506 - 13041375
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttaca-gggggaaa 100  Q
    ||||||||||| ||||| || |||| ||||||||||||||||||||||||||||| ||||||| ||||||||||        ||||||||| ||||||||    
T  13041506 ctcaaattacagggggtaaagttttccatgaaggtccaaaaccaaaaaatcttcaaattacaaggatgaaattccaaaaaactattttacaggggggaaa 13041407  T
Q  101 atcagaaatgacctaaattacaaggggttaaa 132  Q
    | | |||||||| || |||||| |||| ||||    
T  13041406 accggaaatgacttatattacaggggggtaaa 13041375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 132
Target Start/End: Complemental strand, 13049583 - 13049452
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttaca-gggggaaa 100  Q
    ||||||||||| ||||| || |||| ||||||||||||||||||||||||||||| ||||||| ||||||||||        ||||||||| ||||||||    
T  13049583 ctcaaattacagggggtaaagttttccatgaaggtccaaaaccaaaaaatcttcaaattacaaggatgaaattccaaaaaactattttacaggggggaaa 13049484  T
Q  101 atcagaaatgacctaaattacaaggggttaaa 132  Q
    | | |||||||| || |||||| |||| ||||    
T  13049483 accggaaatgacttatattacaggggggtaaa 13049452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 28735673 - 28735747
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    |||||||||||| ||||||||| ||| || |||||||||||||||||||||||||| ||||||| ||||||||||    
T  28735673 tctcaaattacagggggtgaaaatttccaggaaggtccaaaaccaaaaaatcttcaaattacaaggatgaaattc 28735747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 48689304 - 48689377
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    ||||||||||| || |||||||||| ||||||||||||||| ||||||||||||| ||||||| ||||||||||    
T  48689304 ctcaaattacagggtgtgaaattttccatgaaggtccaaaatcaaaaaatcttcaaattacaaggatgaaattc 48689377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 26770065 - 26770002
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaa 64  Q
    ||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||| |||||||    
T  26770065 tctcaaattacaaggggcgaaattttccatgaaggtccaaaagcaaaaaatcttcaaattacaa 26770002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 16896077 - 16896004
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    ||||||||| | ||||||||||||| |||||| || ||||||||||||||||||| ||||||| ||||||||||    
T  16896077 ctcaaattagagggggtgaaattttccatgaaagttcaaaaccaaaaaatcttcaaattacaaggatgaaattc 16896004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 22818114 - 22818187
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    ||||||||||| ||| | ||||||| |||||||||| |||||||||||||||||| ||||||| ||||||||||    
T  22818114 ctcaaattacaggggataaaattttccatgaaggtctaaaaccaaaaaatcttcaaattacaaggatgaaattc 22818187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 31073833 - 31073764
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaa 71  Q
    |||||||||||  |||||||||||||||||| | ||||||||||||||||||||| ||||||| ||||||    
T  31073833 ctcaaattacagagggtgaaatttttcatgacgctccaaaaccaaaaaatcttcaaattacaaggatgaa 31073764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 38703128 - 38703055
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    |||| |||||| |||||||||||||  |||||||| ||||||||||||||||||| ||||||| ||||||||||    
T  38703128 ctcatattacagggggtgaaattttctatgaaggttcaaaaccaaaaaatcttcaaattacaaggatgaaattc 38703055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 145
Target Start/End: Complemental strand, 300286 - 300167
Alignment:
Q  26 ttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacaggggg-aaaatcagaaatgacctaaattacaag 124  Q
    |||||||||||||||||||||||| || ||| ||||||| || |||||||        |||||||||||||| |||||| ||||||||||| |||||| |    
T  300286 ttcatgaaggtccaaaaccaaaaa-tcatcaaattacaaggacgaaattcaaaaaatatattttacagggggtaaaatcggaaatgacctatattacagg 300188  T
Q  125 gggttaaagcactattaaccc 145  Q
    ||| |||| ||||||||||||    
T  300187 ggggtaaaacactattaaccc 300167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 23293554 - 23293494
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatatta 61  Q
    |||||||||||||||||  |||||||||||||| ||| |||||||||||||||||| ||||    
T  23293554 tctcaaattacaaggggcaaaatttttcatgaaagtctaaaaccaaaaaatcttcaaatta 23293494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 150
Target Start/End: Original strand, 52839556 - 52839680
Alignment:
Q  26 ttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacaggggg-aaaatcagaaatgacctaaattacaag 124  Q
    |||||||||||||||||||||||| |||||| ||||||| || ||||| |        |||||||||||||| |||| | ||||||||||| |||||| |    
T  52839556 ttcatgaaggtccaaaaccaaaaa-tcttcaaattacaaggacgaaatccaaaaaatatattttacagggggtaaaaccggaaatgacctatattacagg 52839654  T
Q  125 gggttaaagcactattaaccctaaaa 150  Q
    ||| |||| |||||||||||| ||||    
T  52839655 ggggtaaaacactattaacccaaaaa 52839680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 84 - 151
Target Start/End: Original strand, 8355563 - 8355630
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaat 151  Q
    |||||||||||||||||| ||||||||||||| |||||| |||| |||||  |||||||||| |||||    
T  8355563 tattttacagggggaaaaccagaaatgacctatattacaggggggtaaagacctattaacccaaaaat 8355630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 7226270 - 7226332
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaa 64  Q
    ||||||||||| ||||  |||||||||||||||||| ||||| |||||||||||| |||||||    
T  7226270 ctcaaattacagggggcaaaatttttcatgaaggtctaaaacaaaaaaatcttcaaattacaa 7226332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 148
Target Start/End: Complemental strand, 22818000 - 22817878
Alignment:
Q  26 ttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacaggggg-aaaatcagaaatgacctaaattacaag 124  Q
    |||||||||||||||||||||||| |||||| ||||||| || ||||| |        |||||||  ||||| |||||| ||||||||||| |||||| |    
T  22818000 ttcatgaaggtccaaaaccaaaaa-tcttcaaattacaaggacgaaatccaaaaaatatattttatcgggggtaaaatcggaaatgacctatattacagg 22817902  T
Q  125 gggttaaagcactattaaccctaa 148  Q
    ||| |||| |||||||||||||||    
T  22817901 ggggtaaaacactattaaccctaa 22817878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 32721652 - 32721582
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaa 72  Q
    ||||||||||| |||||||||||||   | |||||||||||| |||||||||||| ||||||| |||||||    
T  32721652 ctcaaattacagggggtgaaattttcattaaaggtccaaaactaaaaaatcttcaaattacaaggatgaaa 32721582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 144
Target Start/End: Original strand, 7272728 - 7272869
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaaa 101  Q
    ||||||||||| ||||  |||||||||||||| ||| ||||| |||||||||| | |||| || || ||||| |        ||||||||||||||||||    
T  7272728 ctcaaattacagggggcaaaatttttcatgaaagtctaaaacaaaaaaatctttaaattataaggacgaaatccaaaaaaaatattttacagggggaaaa 7272827  T
Q  102 tcagaaatgacctaaattacaaggggttaaagcactattaacc 144  Q
        |||||||||| ||||| ||||| ||||||||||||||||    
T  7272828 ctgaaaatgacctatattac-agggggtaaagcactattaacc 7272869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 147
Target Start/End: Original strand, 19111197 - 19111317
Alignment:
Q  26 ttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaaatcagaaatgacctaaattacaagg 125  Q
    |||||||||||||||||||||||| |||||| ||||||| ||  |||| |        ||||||||||||| |||| || || ||||||| |||||| ||    
T  19111197 ttcatgaaggtccaaaaccaaaaa-tcttcaaattacaaggacaaaatccaaaaaaaatattttacaggggtaaaaccaaaagtgacctatattacaggg 19111295  T
Q  126 ggttaaagcactattaacccta 147  Q
    || |||| ||||||||||||||    
T  19111296 gggtaaaacactattaacccta 19111317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 128
Target Start/End: Original strand, 12767164 - 12767207
Alignment:
Q  85 attttacagggggaaaatcagaaatgacctaaattacaaggggt 128  Q
    |||||||||||| |||||||||||||||||| ||||||||||||    
T  12767164 attttacaggggaaaaatcagaaatgacctatattacaaggggt 12767207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 150
Target Start/End: Complemental strand, 15096586 - 15096519
Alignment:
Q  84 tattttacagggggaaaatcagaaa-tgacctaaattacaaggggttaaagcactattaaccctaaaa 150  Q
    |||||||||||||||||| || ||| ||||||| |||||| |||| |||||||| |||||||||||||    
T  15096586 tattttacagggggaaaaacaaaaaatgacctatattacaggggggtaaagcaccattaaccctaaaa 15096519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 39218795 - 39218732
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaa 64  Q
    |||||||||| | ||||  |||||||||||||||||| ||||| |||||||||||| |||||||    
T  39218795 tctcaaattatagggggcaaaatttttcatgaaggtctaaaacaaaaaaatcttcaaattacaa 39218732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 151
Target Start/End: Original strand, 39846577 - 39846643
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaat 151  Q
    ||||||||||||| |||| || |||||||||| ||||| ||||| |||||||| ||||||||||||||    
T  39846577 tattttacaggggaaaaaccaaaaatgacctatattac-agggggtaaagcaccattaaccctaaaat 39846643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 147
Target Start/End: Original strand, 5572210 - 5572331
Alignment:
Q  26 ttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacaggggg-aaaatcagaaatgacctaaattacaag 124  Q
    ||||||||||||||||| |||||| |||||| ||||||| || ||||| |        |||||||||||||| |||| | ||||||||||| |||||| |    
T  5572210 ttcatgaaggtccaaaatcaaaaa-tcttcaaattacaaggacgaaatccaaaaaatatattttacagggggtaaaaccggaaatgacctatattacagg 5572308  T
Q  125 gggttaaagcactattaacccta 147  Q
    ||  |||| ||||||||||||||    
T  5572309 ggagtaaaacactattaacccta 5572331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 54571247 - 54571206
Alignment:
Q  23 tttttcatgaaggtccaaaaccaaaaaatcttcatattacaa 64  Q
    ||||||||||||||| |||||||||||||||||| |||||||    
T  54571247 tttttcatgaaggtctaaaaccaaaaaatcttcaaattacaa 54571206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 146
Target Start/End: Complemental strand, 39846434 - 39846374
Alignment:
Q  87 tttacagggg-gaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    |||||||||| ||||| || |||||||||| ||||||||||| |||||||| |||||||||    
T  39846434 tttacaggggagaaaaccaaaaatgacctatattacaagggggtaaagcaccattaaccct 39846374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 147
Target Start/End: Complemental strand, 41747364 - 41747304
Alignment:
Q  87 tttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaacccta 147  Q
    |||||||||||||||  | |||||||||| |||||| |||| |||||||| ||||||||||    
T  41747364 tttacagggggaaaacaaaaaatgacctatattacaggggggtaaagcaccattaacccta 41747304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 48418714 - 48418651
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaa 148  Q
    |||||||||| |||||||| | |||||||||| |||||| ||||| ||||||| |||||||||||    
T  48418714 tattttacagagggaaaataaaaaatgacctatattacagggggt-aaagcaccattaaccctaa 48418651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 52962402 - 52962469
Alignment:
Q  5 aaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaat 73  Q
    |||||||||||| ||||||||| |||||| ||||||||||| |||||||||| || | || ||||||||    
T  52962402 aaattacaaggg-tgaaattttccatgaatgtccaaaaccataaaatcttcaaatcagaaggatgaaat 52962469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 151
Target Start/End: Original strand, 1351464 - 1351530
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaat 151  Q
    ||||||||| ||| |||| || |||||||||| |||||| ||||| ||||||| ||||||||||||||    
T  1351464 tattttacaagggaaaaaccaaaaatgacctatattacagggggt-aaagcaccattaaccctaaaat 1351530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 147
Target Start/End: Original strand, 3820707 - 3820770
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaacccta 147  Q
    ||||||||||||| ||||  | |||||||||| |||||| | || |||||||||||||||||||    
T  3820707 tattttacaggggaaaaacaaaaaatgacctatattacaggagggtaaagcactattaacccta 3820770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 147
Target Start/End: Original strand, 15096702 - 15096765
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaacccta 147  Q
    ||||||||||||||||||  | |||||||||| |||||| |||| || ||||| ||||||||||    
T  15096702 tattttacagggggaaaacaaaaaatgacctatattacaggggggtagagcaccattaacccta 15096765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 146
Target Start/End: Complemental strand, 23626183 - 23626120
Alignment:
Q  84 tattttacaggg-ggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    ||||||||| || |||||| | ||||||||||| ||||||||||| ||||||||| ||||||||    
T  23626183 tattttacaaggaggaaaaccggaaatgacctatattacaagggggtaaagcactgttaaccct 23626120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 146
Target Start/End: Complemental strand, 29013464 - 29013405
Alignment:
Q  87 tttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    |||||||||  |||| ||||||||||||| |||||| |||| |||||||| |||||||||    
T  29013464 tttacagggaaaaaaccagaaatgacctatattacagggggataaagcaccattaaccct 29013405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 146
Target Start/End: Complemental strand, 48489068 - 48489006
Alignment:
Q  83 ttattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    |||||||||||||||||||| | ||| |||||| ||||| ||||| |||||||| |||||||||    
T  48489068 ttattttacagggggaaaataaaaaacgacctatattac-agggggtaaagcacaattaaccct 48489006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 146
Target Start/End: Original strand, 51252280 - 51252343
Alignment:
Q  84 tattttacaggggg-aaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    |||||||||||||| |||| ||||||||||||| |||||| |||| |||||  |||||||||||    
T  51252280 tattttacaggggggaaaaccagaaatgacctatattacagggggataaagacctattaaccct 51252343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 14824812 - 14824750
Alignment:
Q  84 tattttacaggggg-aaaatcagaaatgacctaaattacaaggggttaaagcactattaaccc 145  Q
    |||||||||||||| ||||||| || ||||||| |||||| |||  |||||||||||||||||    
T  14824812 tattttacagggggcaaaatcaaaagtgacctatattacaggggcgtaaagcactattaaccc 14824750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 146
Target Start/End: Complemental strand, 19301239 - 19301178
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    ||||||||||||||||||| | |||||||||| ||||| ||||| |||| ||| |||||||||    
T  19301239 tattttacagggggaaaataaaaaatgacctatattac-agggggtaaaacaccattaaccct 19301178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 28208145 - 28208207
Alignment:
Q  88 ttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaa 150  Q
    |||||||||||||| || || || |||| |||||| |||| |||||| |||||||||||||||    
T  28208145 ttacagggggaaaaccaaaagtgccctatattacaggggggtaaagctctattaaccctaaaa 28208207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 30226315 - 30226357
Alignment:
Q  27 tcatgaaggtccaaaaccaaaaaatcttcatattacaatgatg 69  Q
    |||||||||||||||| |||| |||||||| ||||||||||||    
T  30226315 tcatgaaggtccaaaatcaaagaatcttcaaattacaatgatg 30226357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 45151852 - 45151902
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatc 52  Q
    ||||||||||| ||||  ||| |||||||||||||| ||||||||||||||    
T  45151852 ctcaaattacagggggcaaaaattttcatgaaggtctaaaaccaaaaaatc 45151902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 149
Target Start/End: Original strand, 49872949 - 49873010
Alignment:
Q  87 tttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaa 149  Q
    ||||||||||||||| | ||||||||||| ||||| ||||| |||||  ||||||||||||||    
T  49872949 tttacagggggaaaaccggaaatgacctatattac-agggggtaaagacctattaaccctaaa 49873010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 146
Target Start/End: Original strand, 53806793 - 53806854
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    ||||||| ||||||||||||  |||||||||| ||||||||||| |||||  |||||||||||    
T  53806793 tattttatagggggaaaatcgaaaatgacctatattacaagggg-taaagacctattaaccct 53806854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 147
Target Start/End: Complemental strand, 7226107 - 7226066
Alignment:
Q  106 aaatgacctaaattacaaggggttaaagcactattaacccta 147  Q
    |||||||||| |||||| |||| |||||||||||||||||||    
T  7226107 aaatgacctatattacaggggggtaaagcactattaacccta 7226066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 25024679 - 25024622
Alignment:
Q  5 aaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattac 62  Q
    |||||||| | || |||||||  |||||||||||||||| |||||||||||| |||||    
T  25024679 aaattacaggtggcgaaatttgccatgaaggtccaaaacaaaaaaatcttcaaattac 25024622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 44963250 - 44963299
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaa 50  Q
    |||||||||||| || | ||||||||||||||| ||||||||| ||||||    
T  44963250 tctcaaattacagggagcgaaatttttcatgaaagtccaaaacaaaaaaa 44963299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 150
Target Start/End: Original strand, 48489246 - 48489303
Alignment:
Q  93 gggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaa 150  Q
    |||| |||| || |||||| ||| |||||| ||||||||||||| |||||||||||||    
T  48489246 ggggaaaaaccaaaaatgaactatattacagggggttaaagcaccattaaccctaaaa 48489303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 145
Target Start/End: Complemental strand, 20957003 - 20956943
Alignment:
Q  85 attttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccc 145  Q
    |||||||||||||||||||| ||||||| || |||||| |||  |||||  ||||||||||    
T  20957003 attttacagggggaaaatcaaaaatgacatatattacaggggtgtaaagacctattaaccc 20956943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 146
Target Start/End: Original strand, 26770257 - 26770297
Alignment:
Q  106 aaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    |||||||||| |||||| |||| ||||||||||||||||||    
T  26770257 aaatgacctatattacaggggggtaaagcactattaaccct 26770297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 36727774 - 36727726
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaa 50  Q
    ||||||||||| |||| ||| |||  |||||||||||||||||||||||    
T  36727774 ctcaaattacagggggcgaagtttaccatgaaggtccaaaaccaaaaaa 36727726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 62; Significance: 6e-27; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 332295 - 332440
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc-nnnnnnnttattttaca-ggggga 98  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||         ||||||||| ||||||    
T  332295 tctcaaattacagggggtgaaatttttcttgaaggtccaaaaccaaaaaatcttcaaattacaaggatgaaattcaaaaaaaaatattttacagggggga 332394  T
Q  99 aaatcagaaatgacctaaattacaaggggttaaagcactattaaccc 145  Q
    ||| | ||||||||||| |||||  |||| |||||||||||||||||    
T  332395 aaaccggaaatgacctatattac-tgggggtaaagcactattaaccc 332440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 432539 - 432466
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  432539 ctcaaattacaaggggtgaaattttccatgaaggtccaaaaccaaaaaatcttcaaattacaaggatgaaattc 432466  T

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Target: scaffold0430 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0430
Description:

Target: scaffold0430; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 142
Target Start/End: Complemental strand, 12628 - 12487
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaaa 101  Q
    ||||||||||| || | |||||||||||||||||||||||||||||| ||||| | ||||||| ||||||||||        ||||||||||||||||||    
T  12628 ctcaaattacagggagcgaaatttttcatgaaggtccaaaaccaaaatatctttaaattacaaggatgaaattcaaaaaaaatattttacagggggaaaa 12529  T
Q  102 tc-agaaatgacctaaattacaaggggttaaagcactattaa 142  Q
     | | |||||||||| |||||| |||| ||||||||||||||    
T  12528 acaaaaaatgacctatattacaggggggtaaagcactattaa 12487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 9421 - 9494
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    |||||||||||||||||||||||||  ||||||||| |||||||||||||||||| ||||||| ||||||||||    
T  9421 ctcaaattacaaggggtgaaattttcaatgaaggtcaaaaaccaaaaaatcttcaaattacaaggatgaaattc 9494  T

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Target: scaffold0154; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 9339 - 9291
Alignment:
Q  26 ttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc 75  Q
    |||||||||||||||||||||||||| |||| ||||||| || |||||||    
T  9339 ttcatgaaggtccaaaaccaaaaaat-ttcaaattacaaggacgaaattc 9291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 146
Target Start/End: Complemental strand, 18770 - 18642
Alignment:
Q  17 gtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaaatcagaaatgacctaa 116  Q
    |||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||        ||||||| ||||| ||||||  ||||||||||     
T  18770 gtgaaatttttcatgaaattccaaaaccaaaaaatcttcaaattacaatgatgaaattcaaaaaaaatattttataggggaaaaatcgaaaatgacctat 18671  T
Q  117 attacaaggggttaaagcactattaaccct 146  Q
    ||||| ||| | |||| |||||||||||||    
T  18670 attac-aggaggtaaaacactattaaccct 18642  T

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Target: scaffold1462 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold1462
Description:

Target: scaffold1462; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 310 - 373
Alignment:
Q  1 tctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaa 64  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||    
T  310 tctcaaattacaaggggtgaaatttgccatgaaggtccaaaaccaaaaaatcttcaaattacaa 373  T

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Target: scaffold0004 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 212712 - 212852
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattc-nnnnnnnttattttacagggggaaa 100  Q
    ||||||||||| ||||||||||||| ||| |||||| |||||||||||||||||| ||| ||| ||||||||||         ||||||||||||| |||    
T  212712 ctcaaattaca-ggggtgaaattttccataaaggtcaaaaaccaaaaaatcttcaaattgcaaagatgaaattcaaaaaaaaatattttacaggggaaaa 212810  T
Q  101 atcagaaatgacctaaattacaaggggt-taaagcactatta 141  Q
    | ||||||||||||| |||||| ||||| |||| ||||||||    
T  212811 accagaaatgacctatattacagggggtgtaaaacactatta 212852  T

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Target: scaffold0289 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 6956 - 7018
Alignment:
Q  3 tcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaat 65  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||| |||| ||||||||    
T  6956 tcaaattacaaggagtgaaattttccatgaaggtccaaaaccaaaaaattttcaaattacaat 7018  T

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Target: scaffold0289; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 148
Target Start/End: Complemental strand, 6843 - 6723
Alignment:
Q  26 ttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacagggggaaaatcagaaatgacctaaattacaagg 125  Q
    |||||||||||| ||||||||||| || |||  ||||||||| ||||| |        ||||||||| ||| |||| | ||||||||||| |||||||||    
T  6843 ttcatgaaggtcaaaaaccaaaaa-tcatcaacttacaatgacgaaatccaaaaaaaatattttacaagggtaaaaccggaaatgacctatattacaagg 6745  T
Q  126 ggttaaagcactattaaccctaa 148  Q
    ||| ||| |||||||||||||||    
T  6744 ggtgaaa-cactattaaccctaa 6723  T

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Target: scaffold0009 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 146
Target Start/End: Complemental strand, 150047 - 149985
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    |||||||||||||||||| || |||||||||| |||||| |||| |||||||| |||||||||    
T  150047 tattttacagggggaaaaccaaaaatgacctatattacaggggggtaaagcaccattaaccct 149985  T

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Target: scaffold0769 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0769
Description:

Target: scaffold0769; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 147
Target Start/End: Complemental strand, 3975 - 3912
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaacccta 147  Q
    |||||||||||||||||| | ||||||||||| |||||| |||| |||||  ||||||||||||    
T  3975 tattttacagggggaaaaccggaaatgacctatattacaggggggtaaagacctattaacccta 3912  T

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Target: scaffold0769; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 156
Target Start/End: Original strand, 4147 - 4219
Alignment:
Q  84 tattttacaggggg-aaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaatgtata 156  Q
    |||||||||||||| |||| | ||||||||||| ||||| ||||| |||||  |||||||||||||||| ||||    
T  4147 tattttacaggggggaaaaccggaaatgacctatattac-agggggtaaagacctattaaccctaaaatctata 4219  T

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Target: scaffold0142 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 146
Target Start/End: Complemental strand, 34630 - 34568
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    |||||||||||||||||| | ||||||||||| ||||||| ||| |||||  |||||||||||    
T  34630 tattttacagggggaaaaccggaaatgacctatattacaaaggggtaaagacctattaaccct 34568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1797 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1797
Description:

Target: scaffold1797; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 151
Target Start/End: Original strand, 673 - 742
Alignment:
Q  83 ttattttacagggg-gaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaat 151  Q
    |||||||||||||| ||||| || |||||||||| |||||| |||| |||| ||| ||||||||||||||    
T  673 ttattttacaggggagaaaaccaaaaatgacctatattacaggggggtaaaacaccattaaccctaaaat 742  T

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Target: scaffold0450 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 7918 - 7854
Alignment:
Q  85 attttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaa 150  Q
    ||||||||||||||||| |||||||||| || ||||| ||||| |||||  |||||||||||||||    
T  7918 attttacagggggaaaaccagaaatgacatatattac-agggggtaaagacctattaaccctaaaa 7854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 146
Target Start/End: Complemental strand, 6870 - 6809
Alignment:
Q  85 attttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    ||||||||||||||||| || |||||||||| |||||| |||| |||||  |||||||||||    
T  6870 attttacagggggaaaaccataaatgacctatattacagggggataaagacctattaaccct 6809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 146
Target Start/End: Original strand, 14443 - 14505
Alignment:
Q  84 tattttacagggg-gaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    ||||||||||||| |||||||| |||||||||| ||||| ||||| |||||||| |||||||||    
T  14443 tattttacaggggggaaaatcaaaaatgacctatattac-agggggtaaagcaccattaaccct 14505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 151
Target Start/End: Original strand, 34978 - 35045
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaat 151  Q
    ||||||||||||||||||  | |||||||||| |||||| |||| ||||| || ||||||||| ||||    
T  34978 tattttacagggggaaaacaaaaaatgacctatattacaggggggtaaagtaccattaacccttaaat 35045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 150
Target Start/End: Complemental strand, 29522 - 29455
Alignment:
Q  84 tattttacagggg-gaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccctaaaa 150  Q
    ||||||||| ||| |||||| | |||||||||| |||||| ||||  |||||||||||||||||||||    
T  29522 tattttacatgggtgaaaataaaaaatgacctatattacaggggggcaaagcactattaaccctaaaa 29455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 146
Target Start/End: Complemental strand, 145390 - 145327
Alignment:
Q  84 tattttacaggggg-aaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    |||||||||||||| ||||||| |||||||||| |||||| |||| |||| ||| |||||||||    
T  145390 tattttacagggggaaaaatcaaaaatgacctatattacaggggggtaaaacaccattaaccct 145327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 145
Target Start/End: Complemental strand, 242535 - 242391
Alignment:
Q  2 ctcaaattacaaggggtgaaatttttcatgaaggtccaaaaccaaaaaatcttcatattacaatgatgaaattcnnnnnnnttattttacaggg-ggaaa 100  Q
    |||||||||||  | |||||||||| ||||||| || |||| ||||||||||||| || | || ||||||||||        |||||||||||| |||||    
T  242535 ctcaaattacagagagtgaaattttccatgaagttcgaaaaacaaaaaatcttcaaatcataaggatgaaattcaaaaaaaatattttacagggaggaaa 242436  T
Q  101 atcagaaatgacctaaattacaaggggttaaagcactattaaccc 145  Q
    | |  |||| ||||| |||||| | || |||| ||||||||||||    
T  242435 accgaaaataacctatattacaggaggataaaacactattaaccc 242391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0511 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 146
Target Start/End: Original strand, 5427 - 5484
Alignment:
Q  88 ttacagggggaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    |||||||||||| | || |||||||||| ||||||||||| |||||||| |||||||||    
T  5427 ttacagggggaataccaaaaatgacctatattacaagggg-taaagcaccattaaccct 5484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 145
Target Start/End: Original strand, 149615 - 149677
Alignment:
Q  84 tattttacagggggaaaat-cagaaatgacctaaattacaaggggttaaagcactattaaccc 145  Q
    |||||||||||||| |||| || |||||||||| |||||| |||| |||||||| ||||||||    
T  149615 tattttacaggggggaaatccaaaaatgacctatattacaggggggtaaagcaccattaaccc 149677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 38109 - 38072
Alignment:
Q  85 attttacagggggaaaatcagaaatgacctaaattaca 122  Q
    ||||| ||||||||||||||||||||||||| ||||||    
T  38109 attttgcagggggaaaatcagaaatgacctatattaca 38072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 2057 - 2118
Alignment:
Q  86 ttttacagggg-gaaaatcagaaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    ||||||||||| ||||| ||||||||||||| |||||| |||| |||||  |||||||||||    
T  2057 ttttacaggggtgaaaaccagaaatgacctatattacaggggggtaaagacctattaaccct 2118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 121
Target Start/End: Original strand, 174600 - 174637
Alignment:
Q  84 tattttacagggggaaaatcagaaatgacctaaattac 121  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  174600 tattttacagggggaaaatcggaaatgacctatattac 174637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 145
Target Start/End: Complemental strand, 1886 - 1846
Alignment:
Q  105 gaaatgacctaaattacaaggggttaaagcactattaaccc 145  Q
    ||||||||||| ||||||||||| |||| ||||||||||||    
T  1886 gaaatgacctatattacaagggggtaaaacactattaaccc 1846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 25067 - 25027
Alignment:
Q  106 aaatgacctaaattacaaggggttaaagcactattaaccct 146  Q
    |||||||||| ||||||||||| |||||||| |||||||||    
T  25067 aaatgacctatattacaagggggtaaagcaccattaaccct 25027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 306724 - 306760
Alignment:
Q  28 catgaaggtccaaaaccaaaaaatcttcatattacaa 64  Q
    |||||||||||||||||||| |||||||| |||||||    
T  306724 catgaaggtccaaaaccaaagaatcttcaaattacaa 306760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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