View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5706_low_23 (Length: 380)

Name: NF5706_low_23
Description: NF5706
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5706_low_23
NF5706_low_23
[»] chr2 (22 HSPs)
chr2 (202-380)||(41251645-41251823)
chr2 (204-380)||(6403815-6403991)
chr2 (204-380)||(42439966-42440142)
chr2 (204-380)||(17445052-17445226)
chr2 (203-380)||(18981596-18981772)
chr2 (204-380)||(35962695-35962871)
chr2 (204-380)||(32127152-32127328)
chr2 (204-361)||(2958131-2958287)
chr2 (208-380)||(31581633-31581805)
chr2 (204-380)||(16405580-16405756)
chr2 (225-380)||(45418584-45418739)
chr2 (225-380)||(44084614-44084769)
chr2 (230-380)||(771005-771155)
chr2 (225-380)||(8147352-8147508)
chr2 (207-380)||(2285845-2286018)
chr2 (226-380)||(8059344-8059498)
chr2 (243-380)||(12756848-12756985)
chr2 (225-324)||(26237958-26238056)
chr2 (243-380)||(26162713-26162847)
chr2 (248-350)||(4555250-4555354)
chr2 (233-299)||(7072644-7072710)
chr2 (244-299)||(34905969-34906024)
[»] chr3 (20 HSPs)
chr3 (203-380)||(6269437-6269614)
chr3 (200-380)||(19390122-19390302)
chr3 (204-380)||(22968455-22968631)
chr3 (203-380)||(39771769-39771946)
chr3 (208-379)||(34084134-34084305)
chr3 (225-380)||(45182982-45183137)
chr3 (204-380)||(11018223-11018399)
chr3 (225-380)||(6930905-6931060)
chr3 (207-380)||(40081752-40081922)
chr3 (225-380)||(33040954-33041109)
chr3 (225-375)||(19565517-19565667)
chr3 (228-380)||(27935182-27935334)
chr3 (225-375)||(45335876-45336025)
chr3 (204-379)||(6503581-6503756)
chr3 (225-380)||(35514267-35514418)
chr3 (240-320)||(5135285-5135365)
chr3 (208-281)||(22922141-22922214)
chr3 (225-273)||(5354710-5354758)
chr3 (225-261)||(6890999-6891035)
chr3 (344-380)||(22922215-22922251)
[»] chr7 (22 HSPs)
chr7 (204-380)||(14777118-14777294)
chr7 (208-380)||(8394109-8394281)
chr7 (203-380)||(5555466-5555643)
chr7 (204-380)||(3114107-3114283)
chr7 (208-380)||(36630800-36630972)
chr7 (225-380)||(37002155-37002310)
chr7 (225-380)||(8867742-8867897)
chr7 (225-372)||(34389075-34389222)
chr7 (233-380)||(35090177-35090324)
chr7 (240-380)||(38638247-38638387)
chr7 (240-380)||(40920014-40920154)
chr7 (228-380)||(26624749-26624902)
chr7 (225-380)||(33685565-33685720)
chr7 (231-380)||(43184479-43184628)
chr7 (243-380)||(36658200-36658337)
chr7 (41-183)||(25151928-25152062)
chr7 (225-380)||(7002726-7002881)
chr7 (225-380)||(7048597-7048752)
chr7 (211-299)||(26502797-26502885)
chr7 (211-299)||(26589829-26589917)
chr7 (283-350)||(10868514-10868583)
chr7 (237-269)||(10876829-10876861)
[»] chr5 (21 HSPs)
chr5 (204-377)||(36293635-36293808)
chr5 (203-380)||(39434675-39434852)
chr5 (207-380)||(10033910-10034083)
chr5 (207-380)||(13817960-13818133)
chr5 (204-380)||(26283329-26283505)
chr5 (208-376)||(1776391-1776559)
chr5 (204-380)||(39657517-39657693)
chr5 (243-380)||(16155016-16155153)
chr5 (204-375)||(3155647-3155818)
chr5 (225-380)||(17332562-17332717)
chr5 (225-380)||(37254642-37254797)
chr5 (254-380)||(16333887-16334013)
chr5 (226-380)||(19985941-19986095)
chr5 (225-380)||(12278871-12279026)
chr5 (225-380)||(31680368-31680523)
chr5 (225-379)||(31501728-31501882)
chr5 (238-380)||(33430335-33430477)
chr5 (241-378)||(43068894-43069031)
chr5 (226-380)||(36291373-36291527)
chr5 (237-350)||(28801300-28801415)
chr5 (207-260)||(14316641-14316694)
[»] chr4 (37 HSPs)
chr4 (203-380)||(20129289-20129466)
chr4 (203-380)||(25930687-25930864)
chr4 (204-380)||(13012168-13012344)
chr4 (204-380)||(47500753-47500929)
chr4 (203-380)||(26439290-26439467)
chr4 (204-380)||(34407295-34407471)
chr4 (208-380)||(36382357-36382528)
chr4 (204-380)||(29319716-29319892)
chr4 (204-380)||(43355884-43356060)
chr4 (207-379)||(17511245-17511417)
chr4 (226-379)||(43143596-43143749)
chr4 (207-380)||(40528996-40529171)
chr4 (225-379)||(42333788-42333942)
chr4 (227-380)||(3292907-3293060)
chr4 (225-373)||(10352902-10353050)
chr4 (225-380)||(6690246-6690401)
chr4 (225-380)||(30216753-30216908)
chr4 (225-380)||(50205088-50205243)
chr4 (226-380)||(48989330-48989484)
chr4 (230-380)||(29995994-29996144)
chr4 (279-380)||(6235575-6235676)
chr4 (224-375)||(30077647-30077798)
chr4 (243-380)||(44156670-44156807)
chr4 (225-378)||(26448054-26448206)
chr4 (227-379)||(28877262-28877414)
chr4 (248-379)||(35545977-35546108)
chr4 (259-378)||(1817752-1817871)
chr4 (226-350)||(30109958-30110084)
chr4 (236-321)||(48129978-48130063)
chr4 (226-308)||(45194178-45194260)
chr4 (302-379)||(13392893-13392970)
chr4 (302-379)||(13396032-13396109)
chr4 (207-308)||(27363344-27363445)
chr4 (249-317)||(6254569-6254637)
chr4 (204-265)||(7769308-7769369)
chr4 (225-261)||(49908782-49908818)
chr4 (225-261)||(5517494-5517530)
[»] scaffold0069 (1 HSPs)
scaffold0069 (204-380)||(17822-17998)
[»] scaffold0002 (1 HSPs)
scaffold0002 (204-380)||(480468-480644)
[»] chr6 (11 HSPs)
chr6 (204-380)||(398597-398773)
chr6 (204-380)||(34948769-34948945)
chr6 (203-380)||(13837800-13837977)
chr6 (225-380)||(28996731-28996886)
chr6 (225-380)||(18339107-18339262)
chr6 (230-375)||(29743289-29743434)
chr6 (243-378)||(33229349-33229484)
chr6 (225-308)||(31028447-31028530)
chr6 (225-308)||(24697900-24697983)
chr6 (252-308)||(24695515-24695571)
chr6 (225-260)||(13647018-13647053)
[»] chr1 (13 HSPs)
chr1 (204-380)||(26144235-26144411)
chr1 (204-380)||(7433425-7433601)
chr1 (207-380)||(42310952-42311125)
chr1 (211-380)||(32982067-32982236)
chr1 (232-380)||(321388-321536)
chr1 (228-380)||(3828988-3829139)
chr1 (225-380)||(17445314-17445469)
chr1 (225-380)||(35907553-35907708)
chr1 (204-330)||(23313218-23313345)
chr1 (207-350)||(41972314-41972458)
chr1 (225-350)||(33489688-33489815)
chr1 (239-308)||(35951428-35951497)
chr1 (243-293)||(48901203-48901253)
[»] scaffold2142 (1 HSPs)
scaffold2142 (204-380)||(502-678)
[»] chr8 (15 HSPs)
chr8 (203-380)||(39914494-39914670)
chr8 (208-380)||(15838270-15838441)
chr8 (207-380)||(29728397-29728570)
chr8 (207-380)||(3648805-3648978)
chr8 (228-380)||(16788036-16788188)
chr8 (204-379)||(34136837-34137012)
chr8 (225-379)||(4404009-4404163)
chr8 (225-380)||(23402109-23402264)
chr8 (225-378)||(36408552-36408705)
chr8 (246-378)||(9877242-9877374)
chr8 (225-379)||(2729208-2729362)
chr8 (256-380)||(42230971-42231093)
chr8 (243-350)||(3435288-3435397)
chr8 (247-317)||(40470567-40470637)
chr8 (225-308)||(10397123-10397206)
[»] scaffold0041 (1 HSPs)
scaffold0041 (240-380)||(52941-53081)
[»] scaffold0502 (1 HSPs)
scaffold0502 (225-380)||(5231-5386)
[»] scaffold0154 (1 HSPs)
scaffold0154 (225-380)||(31481-31636)


Alignment Details
Target: chr2 (Bit Score: 155; Significance: 3e-82; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 202 - 380
Target Start/End: Complemental strand, 41251823 - 41251645
Alignment:
Q  202 gtcatgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatt 301  Q
    |||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  41251823 gtcatgggcggttctaccgtgtagtgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatt 41251724  T
Q  302 tacaaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41251723 tacaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 41251645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 204 - 380
Target Start/End: Complemental strand, 6403991 - 6403815
Alignment:
Q  204 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacattta 303  Q
    |||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  6403991 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagttcattaacacattta 6403892  T
Q  304 caaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
     |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  6403891 taaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgac 6403815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 204 - 380
Target Start/End: Original strand, 42439966 - 42440142
Alignment:
Q  204 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacattta 303  Q
    |||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  42439966 catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactaaacccaaaagcccattaacacattta 42440065  T
Q  304 caaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    ||||| |||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  42440066 caaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttgcaattttatttagcacactattgac 42440142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 204 - 380
Target Start/End: Complemental strand, 17445226 - 17445052
Alignment:
Q  204 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacattta 303  Q
    |||||||||||||||||||| |||||| |||||||||| ||| ||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||    
T  17445226 catgggcggttctaccgtgtggcgacctcgggcggtcgcccgagctcgatcgataatttttgcac--tagactcaacccaaaagcccattaacacattta 17445129  T
Q  304 caaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17445128 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 17445052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 203 - 380
Target Start/End: Original strand, 18981596 - 18981772
Alignment:
Q  203 tcatgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacattt 302  Q
    ||||||||||||||||||| | ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18981596 tcatgggcggttctaccgtatggcgaccc-gggcggtcgtccgggctcgattgataatttttgcacattagactcaacccaaaagtccattaaaacattt 18981694  T
Q  303 acaaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    |||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  18981695 acaaaaagaaaaatttgggcaatttaaaaattgtcacacgcaaataggtcttggaattttatttagcacactgttgac 18981772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 204 - 380
Target Start/End: Original strand, 35962695 - 35962871
Alignment:
Q  204 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacattta 303  Q
    |||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||    
T  35962695 catgggcggttctaccgtatggcgaccccaggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcttattaacacattta 35962794  T
Q  304 caaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    ||||| ||||| |||||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  35962795 caaaaagaaaattttgggcaatctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgac 35962871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 204 - 380
Target Start/End: Complemental strand, 32127328 - 32127152
Alignment:
Q  204 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacattta 303  Q
    |||||||||||||| ||| | ||||||||||||||||| |||||||||||| ||||||||||||||||| |||| |||||||||  ||||||||||||||    
T  32127328 catgggcggttctagcgtatggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattaaactcgacccaaaagctcattaacacattta 32127229  T
Q  304 caaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    ||||| ||||||||| |||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  32127228 caaaaagaaaaatttaggcaatctgaaaattgtcacacgcaaatagatcttggaattttatttagcacactattgac 32127152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 204 - 361
Target Start/End: Complemental strand, 2958287 - 2958131
Alignment:
Q  204 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacattta 303  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  2958287 catgggcggttctaccgtatggcgaccccgggcggtcgtccgggctcgatcgataatttt-gcacattagactcaacccaaaagcccattaacacattta 2958189  T
Q  304 caaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattt 361  Q
    ||||  |||||||||||| ||| |||||||||||||||| ||||||||||||||||||    
T  2958188 caaagagaaaaatttgggtaatctgaaaattgtcacacgcaaataggtcttggaattt 2958131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 208 - 380
Target Start/End: Complemental strand, 31581805 - 31581633
Alignment:
Q  208 ggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaa 307  Q
    ||||||||||| || | |||||| |||||||||| || ||||||| ||||| |||||||| |||||||||| |||||||| |||||||||||||||||||    
T  31581805 ggcggttctactgtatggcgaccacgggcggtcgcccaggctcgagcgatactttttgcatattagactcatcccaaaagcccattaacacatttacaaa 31581706  T
Q  308 acgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    | |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  31581705 aagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgac 31581633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 204 - 380
Target Start/End: Original strand, 16405580 - 16405756
Alignment:
Q  204 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacattta 303  Q
    |||||||||||||||| | | | ||||| ||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||  ||||||||||||||    
T  16405580 catgggcggttctaccatatggtgaccctgggcggtcgcccgggctcaatcgataatttttgcacgttagactcaacccaaaagctcattaacacattta 16405679  T
Q  304 caaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
     |||| ||||||||||| |||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  16405680 taaaaagaaaaatttggacaatctgaaaattgtcacacgcaaataagtcttggaattttatttagcacactattgac 16405756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 225 - 380
Target Start/End: Original strand, 45418584 - 45418739
Alignment:
Q  225 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaa 324  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||  ||||||||||| | ||||||||| |||||||| |||||||||||||||    
T  45418584 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagatccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaa 45418683  T
Q  325 tttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    | |||||||| ||||||| ||||||||||  |||||||||||||||||||||||||    
T  45418684 tctgaaaattctcacacgcaaataggtctctgaattttatttagcacactattgac 45418739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 225 - 380
Target Start/End: Complemental strand, 44084769 - 44084614
Alignment:
Q  225 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaa 324  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||| || ||| |||||||| |||||||||| |||||||| |||||||||||||||    
T  44084769 gcgaccccgggcagtcgcccgggctcgatcgataatttttgcacattaaacccaatccaaaagttcattaacacacttacaaaaagaaaaatttgggcaa 44084670  T
Q  325 tttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    | |||||||| ||| ||| ||||||||||  |||||||||||||||||||||||||    
T  44084669 tctgaaaattctcatacgcaaataggtctcagaattttatttagcacactattgac 44084614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 230 - 380
Target Start/End: Original strand, 771005 - 771155
Alignment:
Q  230 cccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaatttga 329  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||| ||||| ||||| ||||||||||| |||||||| |||||||||||||||| |||    
T  771005 cccgggcggtcgcccgggctcgatcgataacttttgcacattagacccaaccaaaaagcccattaacacacttacaaaaagaaaaatttgggcaatctga 771104  T
Q  330 aaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    ||||| ||||||| |||||||||| |||| ||||||||||||| |||||||    
T  771105 aaattctcacacgcaaataggtctcggaactttatttagcacattattgac 771155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 225 - 380
Target Start/End: Original strand, 8147352 - 8147508
Alignment:
Q  225 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaa 324  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||| |||| |||||||| ||||||||| |||||||| |||||||||||||||    
T  8147352 gcgaccccgggcggtcgcccgggctcgatcgataatctttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgggcaa 8147451  T
Q  325 tttg-aaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    | || |||||| ||||||| |||||| ||| ||||||||||||| ||||||||||||    
T  8147452 tctgaaaaattctcacacgcaaatagatctcggaattttatttaacacactattgac 8147508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 207 - 380
Target Start/End: Original strand, 2285845 - 2286018
Alignment:
Q  207 gggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaa 306  Q
    ||||||||||||||  | |||| | ||| ||||| | | || |||||||||||||||||||||||| |  ||||| ||||||| |||||||||||||| |    
T  2285845 gggcggttctaccggatggcgatctcggacggtcattcaggttcgatcgataatttttgcacattaaatccaaccaaaaagtctattaacacatttacga 2285944  T
Q  307 aacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    || |||||||||| ||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  2285945 aaggaaaaatttgagcaatctgaaaattgtcacacgcaaataggttttggaattttatttagcacactattgac 2286018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 226 - 380
Target Start/End: Complemental strand, 8059498 - 8059344
Alignment:
Q  226 cgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaat 325  Q
    ||||||||| || ||| || ||||| ||||||||||||||||||||||| |||||||||||| | ||||||||| |||||||| ||||||||||| ||||    
T  8059498 cgaccccggccgatcgcccaggctcaatcgataatttttgcacattagagtcaacccaaaagccaattaacacacttacaaaaagaaaaatttggccaat 8059399  T
Q  326 ttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    ||||||||| ||||||  |||| ||||| ||||||||||||||||||| ||||||    
T  8059398 ttgaaaattctcacacacaaatcggtctcggaattttatttagcacacaattgac 8059344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 243 - 380
Target Start/End: Complemental strand, 12756985 - 12756848
Alignment:
Q  243 ccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaatttgaaaattgtcacacg 342  Q
    ||||| |||||||||||||||||| |||||||| ||||||||||| | ||||||||| |||||||| |||||||||| ||||| |||||||| |||||||    
T  12756985 ccgggttcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacg 12756886  T
Q  343 taaataggtcttggaattttatttagcacactattgac 380  Q
     ||||| |||| ||||||||||||||||||||||||||    
T  12756885 caaataagtctcggaattttatttagcacactattgac 12756848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 225 - 324
Target Start/End: Original strand, 26237958 - 26238056
Alignment:
Q  225 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaa 324  Q
    ||||||||||||||||| |||||||||||||||| |||||||| ||||||  ||| ||||||||||||||||||| |||||||| |||||||||||||||    
T  26237958 gcgaccccgggcggtcgcccgggctcgatcgata-tttttgcaaattagatgcaaaccaaaagtccattaacacacttacaaaaagaaaaatttgggcaa 26238056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 243 - 380
Target Start/End: Complemental strand, 26162847 - 26162713
Alignment:
Q  243 ccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaatttgaaaattgtcacacg 342  Q
    ||||||||  |||||||||||| ||||||| | |||||||||||  ||||||||||| |||||||| |||||||||||||||| | |||||| ||| ||     
T  26162847 ccgggctccttcgataatttttacacattaaattcaacccaaaaacccattaacacacttacaaaaagaaaaatttgggcaatctaaaaattctcaaaca 26162748  T
Q  343 taaataggtcttggaattttatttagcacactattgac 380  Q
     |||||||||| |||   |||||||||||| |||||||    
T  26162747 caaataggtctcgga---ttatttagcacattattgac 26162713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 248 - 350
Target Start/End: Complemental strand, 4555354 - 4555250
Alignment:
Q  248 ctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggc--aatttgaaaattgtcacacgtaa 345  Q
    ||||||||||||||||||||||| | || |||||||||||  | |||||||| |||||||| ||||| |||||||  ||| |||||||| ||||||||||    
T  4555354 ctcgatcgataatttttgcacatcaaacccaacccaaaagctcgttaacacacttacaaaaagaaaattttgggcaaaatctgaaaattctcacacgtaa 4555255  T
Q  346 atagg 350  Q
    |||||    
T  4555254 atagg 4555250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 233 - 299
Target Start/End: Complemental strand, 7072710 - 7072644
Alignment:
Q  233 gggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacaca 299  Q
    ||||||||| ||||||||||||||||||||||  |||||| |||||||||||||| |||||||||||    
T  7072710 gggcggtcgcccgggctcgatcgataatttttttacattaaactcaacccaaaagcccattaacaca 7072644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 34905969 - 34906024
Alignment:
Q  244 cgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacaca 299  Q
    |||||||||||||||||||||||||||||  |  |||||||||| |||||||||||    
T  34905969 cgggctcgatcgataatttttgcacattaagcctaacccaaaagcccattaacaca 34906024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 154; Significance: 1e-81; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 203 - 380
Target Start/End: Complemental strand, 6269614 - 6269437
Alignment:
Q  203 tcatgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacattt 302  Q
    ||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  6269614 tcatgggcggttctaccgtgtagcgatcccgggcggtcgtccggactcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattt 6269515  T
Q  303 acaaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6269514 acaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 6269437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 200 - 380
Target Start/End: Original strand, 19390122 - 19390302
Alignment:
Q  200 tagtcatgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacaca 299  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  19390122 tagtcatgggaggttctaccgtgtggcgaccccgggcggtcgtccgggttcgatcgataatttttgcacattagactcaacctaaaagtctattaacaca 19390221  T
Q  300 tttacaaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19390222 tttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 19390302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 204 - 380
Target Start/End: Complemental strand, 22968631 - 22968455
Alignment:
Q  204 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacattta 303  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  22968631 catgggcggttctaccgtgtagcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagacttaacccaaaagcccattaacacattta 22968532  T
Q  304 caaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    ||||| |||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22968531 caaaaagaaaaatttgggcaatctaaaaattgtcacacgtaaataggtcttgaaattttatttagcacactattgac 22968455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 203 - 380
Target Start/End: Original strand, 39771769 - 39771946
Alignment:
Q  203 tcatgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacattt 302  Q
    ||||||||||||| ||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  39771769 tcatgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacattt 39771868  T
Q  303 acaaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    | |||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||    
T  39771869 ataaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgac 39771946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 208 - 379
Target Start/End: Complemental strand, 34084305 - 34084134
Alignment:
Q  208 ggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaa 307  Q
    |||||||||||||| | ||||||||||||||||| |||| ||||||||||||||||||||||||| | |||||| |||||||||||||||||||||||||    
T  34084305 ggcggttctaccgtatggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattaaattcaaccaaaaagtccattaacacatttacaaa 34084206  T
Q  308 acgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattga 379  Q
    | |||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  34084205 aagaaaaatttgggcaatatgaaaattatcacacgcaaataggtcttggaattttatttagcacactattga 34084134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 225 - 380
Target Start/End: Original strand, 45182982 - 45183137
Alignment:
Q  225 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaa 324  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||| | ||||||||| |||||||| |||||||||||||||    
T  45182982 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaa 45183081  T
Q  325 tttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    | |||||||| ||||||  |||||||||| ||||||||||||||||||||||||||    
T  45183082 tctgaaaattctcacacacaaataggtctcggaattttatttagcacactattgac 45183137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 204 - 380
Target Start/End: Complemental strand, 11018399 - 11018223
Alignment:
Q  204 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacattta 303  Q
    |||||||||||  |||||   ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||    
T  11018399 catgggcggtttcaccgtccggcgactccgggcggtcgcccaggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 11018300  T
Q  304 caaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    ||||| |||||||||||||||| |||||||| ||||||| ||||||||||  |||||||||||||||||| ||||||    
T  11018299 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcagaattttatttagcacacaattgac 11018223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 225 - 380
Target Start/End: Complemental strand, 6931060 - 6930905
Alignment:
Q  225 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaa 324  Q
    |||||||||| |||||| |||||||||||||||||||||||| |||||||  ||||||||||| | |||||||||||||||||| ||||||||| |||||    
T  6931060 gcgaccccggacggtcgcccgggctcgatcgataatttttgcgcattagatccaacccaaaagccaattaacacatttacaaaaagaaaaatttaggcaa 6930961  T
Q  325 tttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    | |||||||| ||||||| |||||||||| ||||||||||||||||||||||||||    
T  6930960 tctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgac 6930905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 207 - 380
Target Start/End: Complemental strand, 40081922 - 40081752
Alignment:
Q  207 gggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaa 306  Q
    ||||||||||||||| | ||||| | ||  ||||| ||||||||||||||||||||||| ||||||||||||||| |||||  |||||||||||||||||    
T  40081922 gggcggttctaccgtatggcgactctgga-ggtcgcccgggctcgatcgataatttttgaacattagactcaacc-aaaagctcattaacacatttacaa 40081825  T
Q  307 aacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    || ||||||||||||||||||||||||||||||||| |||||| |||||| ||||| |||||||||||||||||    
T  40081824 aaagaaaaatttgggcaatttgaaaattgtcacacgcaaatagatcttgg-attttttttagcacactattgac 40081752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 225 - 380
Target Start/End: Original strand, 33040954 - 33041109
Alignment:
Q  225 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaa 324  Q
    |||||||||||||||||  |||||||||| ||||||||||||| ||||||| |||||||||||   ||||||||| |||||||| ||||||||||  |||    
T  33040954 gcgaccccgggcggtcgctcgggctcgattgataatttttgcatattagacccaacccaaaagctaattaacacacttacaaaaagaaaaatttgaacaa 33041053  T
Q  325 tttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    |||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||    
T  33041054 tttgaaaattttcacacgcaaataggtctcggaattttatttagcacactattgac 33041109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 225 - 375
Target Start/End: Complemental strand, 19565667 - 19565517
Alignment:
Q  225 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaa 324  Q
    |||| |||||||||||| ||||| || |||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||| ||||||||||| |||    
T  19565667 gcgatcccgggcggtcgcccgggttcaatcgataatttttgcacattagacccaaccaaaaaatccattaacacatttacaaaaagaaaaatttggacaa 19565568  T
Q  325 tttgaaaattgtcacacgtaaataggtcttggaattttatttagcacacta 375  Q
    | |||||||| | ||||| |||||||||| |||||||||||||||||||||    
T  19565567 tctgaaaattcttacacgcaaataggtctcggaattttatttagcacacta 19565517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 228 - 380
Target Start/End: Original strand, 27935182 - 27935334
Alignment:
Q  228 accccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaattt 327  Q
    |||| |||| |||| |||||||||||||||||||||||||||||| || |||||||||||  |||||||||| |||||||| |||||||||||||||| |    
T  27935182 accctgggcagtcgcccgggctcgatcgataatttttgcacattaaacccaacccaaaagctcattaacacacttacaaaaagaaaaatttgggcaatct 27935281  T
Q  328 gaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    ||||||| ||| ||| |||||||||| |||||||||||||||| |||||||||    
T  27935282 gaaaattctcatacgaaaataggtctcggaattttatttagcatactattgac 27935334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 225 - 375
Target Start/End: Original strand, 45335876 - 45336025
Alignment:
Q  225 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaa 324  Q
    |||||| |||||||||| |||| ||| ||||||||||||| |||||||||| ||||| ||||||| |||||||||||||||||| ||||||| |||||||    
T  45335876 gcgacctcgggcggtcgcccggactcaatcgataatttttacacattagacccaaccaaaaagtc-attaacacatttacaaaaagaaaaatctgggcaa 45335974  T
Q  325 tttgaaaattgtcacacgtaaataggtcttggaattttatttagcacacta 375  Q
    | |||||||| | ||||| ||||||||||||||||||||||||||||||||    
T  45335975 tctgaaaattcttacacgcaaataggtcttggaattttatttagcacacta 45336025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 204 - 379
Target Start/End: Complemental strand, 6503756 - 6503581
Alignment:
Q  204 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacattta 303  Q
    |||||||||||  |||||   ||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||| | |||| |||| |||    
T  6503756 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgattatttttgcaaattagactcaacccaaaagccaattagcacactta 6503657  T
Q  304 caaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattga 379  Q
    ||||| |||||||||  ||||| |||||||| ||||| | |||||||||| ||| ||||||||||||||| |||||    
T  6503656 caaaaagaaaaatttaagcaatctgaaaattctcacaggcaaataggtctcggatttttatttagcacacaattga 6503581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 225 - 380
Target Start/End: Original strand, 35514267 - 35514418
Alignment:
Q  225 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaa 324  Q
    |||||||||| |||||||||||||||||||||||||||| ||| | ||||  ||||||||||||||||||||||    |||||| ||||||||||| |||    
T  35514267 gcgaccccggacggtcgtccgggctcgatcgataattttcgcatactagatccaacccaaaagtccattaacac----acaaaaagaaaaatttggacaa 35514362  T
Q  325 tttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    | |||||||| |||| || |||||||||| |||||||||||| |||||||||||||    
T  35514363 tatgaaaattctcactcgcaaataggtctaggaattttattttgcacactattgac 35514418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 240 - 320
Target Start/End: Original strand, 5135285 - 5135365
Alignment:
Q  240 cgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgg 320  Q
    ||||| |||||||||||| ||||||| ||||||||| ||||| |||||  |||||||||| |||||||| |||||||||||    
T  5135285 cgtccaggctcgatcgattatttttgtacattagacccaacctaaaagctcattaacacacttacaaaaagaaaaatttgg 5135365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 208 - 281
Target Start/End: Original strand, 22922141 - 22922214
Alignment:
Q  208 ggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacc 281  Q
    |||||||| ||||| | |||| ||||||||||||  |||||||||||||| |||||||||||||| ||||||||    
T  22922141 ggcggttccaccgtatggcgatcccgggcggtcgctcgggctcgatcgatcatttttgcacattaaactcaacc 22922214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 273
Target Start/End: Original strand, 5354710 - 5354758
Alignment:
Q  225 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattag 273  Q
    ||||||||||||||||| ||||||||||||  |||||||  ||||||||    
T  5354710 gcgaccccgggcggtcgcccgggctcgatccttaattttctcacattag 5354758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 261
Target Start/End: Original strand, 6890999 - 6891035
Alignment:
Q  225 gcgaccccgggcggtcgtccgggctcgatcgataatt 261  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  6890999 gcgacaccgggcggtcgcccgggctcgatcgataatt 6891035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 344 - 380
Target Start/End: Original strand, 22922215 - 22922251
Alignment:
Q  344 aaataggtcttggaattttatttagcacactattgac 380  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  22922215 aaatagatcttggaattttatttaacacactattgac 22922251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 149; Significance: 1e-78; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 204 - 380
Target Start/End: Complemental strand, 14777294 - 14777118
Alignment:
Q  204 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacattta 303  Q
    |||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  14777294 catgggcggttctaccgtgtagcgatcccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagctcattaacacattta 14777195  T
Q  304 caaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14777194 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 14777118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 208 - 380
Target Start/End: Original strand, 8394109 - 8394281
Alignment:
Q  208 ggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaa 307  Q
    |||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  8394109 ggcggttctaccgtatggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaa 8394208  T
Q  308 acgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8394209 aggaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 8394281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 203 - 380
Target Start/End: Original strand, 5555466 - 5555643
Alignment:
Q  203 tcatgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacattt 302  Q
    ||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  5555466 tcatgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacgcattt 5555565  T
Q  303 acaaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    |||||| |||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  5555566 acaaaaagaaaaatttgggcaatctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgac 5555643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 204 - 380
Target Start/End: Complemental strand, 3114283 - 3114107
Alignment:
Q  204 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacattta 303  Q
    |||||||||||||||||| | | |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  3114283 catgggcggttctaccgtatggtgaccccggacggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 3114184  T
Q  304 caaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    ||||| |||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  3114183 caaaaagaaaaatttgggcaatctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgac 3114107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 208 - 380
Target Start/End: Original strand, 36630800 - 36630972
Alignment:
Q  208 ggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaa 307  Q
    |||||||||||||| | |||||||||| |||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  36630800 ggcggttctaccgtatggcgaccccggacggtcgcccgggctcgatcgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaa 36630899  T
Q  308 acgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    | |||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  36630900 aagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttagttagcacactattgac 36630972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 225 - 380
Target Start/End: Complemental strand, 37002310 - 37002155
Alignment:
Q  225 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaa 324  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||| ||| ||||||||| ||||||||| |||||||| |||||||||||||||    
T  37002310 gcgaccccgggcggtcgttcggtctcgatcgataatttttgcacattagacccaatccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaa 37002211  T
Q  325 tttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    | |||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  37002210 tctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgac 37002155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 225 - 380
Target Start/End: Complemental strand, 8867897 - 8867742
Alignment:
Q  225 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaa 324  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||| ||||||| | ||||| |||||||||||| |||||||||||||||    
T  8867897 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcatattagacccaatccaaaagccaattaatacatttacaaaaagaaaaatttgggcaa 8867798  T
Q  325 tttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    |  ||||||| ||||||| |||||||||| ||||||||||||||||||||||||||    
T  8867797 tcggaaaattttcacacgcaaataggtctcggaattttatttagcacactattgac 8867742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 225 - 372
Target Start/End: Complemental strand, 34389222 - 34389075
Alignment:
Q  225 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaa 324  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||   ||||||||| |||||||| |||||||||||||||    
T  34389222 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacccaaaagctaattaacacacttacaaaaagaaaaatttgggcaa 34389123  T
Q  325 tttgaaaattgtcacacgtaaataggtcttggaattttatttagcaca 372  Q
    | |||||||| ||||||| |||||||||| ||||||||||||||||||    
T  34389122 tctgaaaattctcacacgcaaataggtctcggaattttatttagcaca 34389075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 233 - 380
Target Start/End: Original strand, 35090177 - 35090324
Alignment:
Q  233 gggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaatttgaaaa 332  Q
    ||||||||| |||||||||||| |||||||||||||||||||| ||||||||||| | ||||||||| |||||||| |||||||||||| ||| ||||||    
T  35090177 gggcggtcgcccgggctcgatcaataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggtaatctgaaaa 35090276  T
Q  333 ttgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    || ||||||| |||||||||| ||||||||||||||||||||||||||    
T  35090277 ttctcacacgcaaataggtctcggaattttatttagcacactattgac 35090324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 240 - 380
Target Start/End: Complemental strand, 38638387 - 38638247
Alignment:
Q  240 cgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaatttgaaaattgtcac 339  Q
    |||||| ||||||| ||||||||||||||||||||  ||||||||||||| ||||||||| |||||||| |||||||||||||||| |||||||| ||||    
T  38638387 cgtccgagctcgattgataatttttgcacattagatccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcac 38638288  T
Q  340 acgtaaataggtcttggaattttatttagcacactattgac 380  Q
    ||| |||||||||| ||||||||||||||||||||||||||    
T  38638287 acgcaaataggtctcggaattttatttagcacactattgac 38638247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 240 - 380
Target Start/End: Complemental strand, 40920154 - 40920014
Alignment:
Q  240 cgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaatttgaaaattgtcac 339  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||| | |||||||||||||||||| ||||||||||| |||| |||||||| ||||    
T  40920154 cgtccgggctcgatcgataatttttgcacattagatttaacccaaaagccaattaacacatttacaaaaagaaaaatttggacaatctgaaaattctcac 40920055  T
Q  340 acgtaaataggtcttggaattttatttagcacactattgac 380  Q
    | | |||||||||| ||||||||||||||||||||||||||    
T  40920054 atgcaaataggtctcggaattttatttagcacactattgac 40920014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 228 - 380
Target Start/End: Original strand, 26624749 - 26624902
Alignment:
Q  228 accccgggcggtcgtccgggctcgat-cgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaatt 326  Q
    |||||||||||||| | ||||||||| |||||||||||||| ||||||| ||| ||||||||  ||||||||| |||||||| ||||||||||||||||     
T  26624749 accccgggcggtcgcctgggctcgattcgataatttttgcatattagacccaatccaaaagttaattaacacacttacaaaaagaaaaatttgggcaatc 26624848  T
Q  327 tgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    |||||||| ||||||| |||||||||| ||||||||||||||||||||||||||    
T  26624849 tgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgac 26624902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 225 - 380
Target Start/End: Original strand, 33685565 - 33685720
Alignment:
Q  225 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaa 324  Q
    |||||||| ||| ||||  ||||||||||||||||||||||||||||| || ||||||||||| ||||||||||| |||||||| |||||||||||||||    
T  33685565 gcgaccccaggcagtcgctcgggctcgatcgataatttttgcacattaaacccaacccaaaagcccattaacacacttacaaaaagaaaaatttgggcaa 33685664  T
Q  325 tttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    | |||||||| ||| ||| ||||| ||||   ||||||||||||||||||||||||    
T  33685665 tctgaaaattctcatacgcaaatatgtctcataattttatttagcacactattgac 33685720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 231 - 380
Target Start/End: Complemental strand, 43184628 - 43184479
Alignment:
Q  231 ccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaatttgaa 330  Q
    |||||||||||  ||||||||||||||||||||| | ||| ||||| |||||||||| | ||||||| | |||||||| |||||||||||||||| ||||    
T  43184628 ccgggcggtcgctcgggctcgatcgataatttttacgcatcagacttaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaatctgaa 43184529  T
Q  331 aattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    |||| ||||||| ||||||||||  |||||||||||||||||||||||||    
T  43184528 aattctcacacgcaaataggtctctgaattttatttagcacactattgac 43184479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 243 - 380
Target Start/End: Original strand, 36658200 - 36658337
Alignment:
Q  243 ccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaatttgaaaattgtcacacg 342  Q
    |||| |||||||||||||||||||||||| ||| ||||| ||||| | ||||||| | | ||||||  ||||||||||||||| |||||||| |||||||    
T  36658200 ccggactcgatcgataatttttgcacattggacccaaccgaaaagccaattaacatactaacaaaaataaaaatttgggcaatctgaaaattctcacacg 36658299  T
Q  343 taaataggtcttggaattttatttagcacactattgac 380  Q
     |||||||||| ||||||||||||||||||||||||||    
T  36658300 caaataggtctcggaattttatttagcacactattgac 36658337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 41 - 183
Target Start/End: Original strand, 25151928 - 25152062
Alignment:
Q  41 acaatggcaactcaaggttacaatgatcactaaattaagcgatcttacctctatgaatgtagcaaacattatttgtggaacctcaagaacactagtttta 140  Q
    |||||||||||||||||||||||||||||||| |||            ||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  25151928 acaatggcaactcaaggttacaatgatcactatatt------------ctctatgaatgtagcaaacattatttgtggaatttcaagaacactagtttta 25152015  T
Q  141 gcagctctcagaactgc----atagagtgaagaagttaatatgaaca 183  Q
    |||||||||| ||||||    ||||||||||||||||||||||||||    
T  25152016 gcagctctcaaaactgcatatatagagtgaagaagttaatatgaaca 25152062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 225 - 380
Target Start/End: Original strand, 7002726 - 7002881
Alignment:
Q  225 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaa 324  Q
    ||||||||| ||||||| ||||||||||||||  ||||||  |||||| || ||||||||||| | |||||||||  |||||||  |||||||||| |||    
T  7002726 gcgaccccgagcggtcgcccgggctcgatcgacgatttttctacattacacccaacccaaaagccaattaacacacatacaaaaataaaaatttggacaa 7002825  T
Q  325 tttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    | | |||||| ||||||| |||||||||  ||||||||||||||||||||||||||    
T  7002826 tctaaaaattctcacacgcaaataggtcacggaattttatttagcacactattgac 7002881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 225 - 380
Target Start/End: Original strand, 7048597 - 7048752
Alignment:
Q  225 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaa 324  Q
    ||||||||| ||||||| ||||||||||||||  ||||||  |||||| || ||||||||||| | |||||||||  |||||||  |||||||||| |||    
T  7048597 gcgaccccgagcggtcgcccgggctcgatcgacgatttttctacattacacccaacccaaaagccaattaacacacatacaaaaataaaaatttggacaa 7048696  T
Q  325 tttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    | | |||||| ||||||| |||||||||  ||||||||||||||||||||||||||    
T  7048697 tctaaaaattctcacacgcaaataggtcacggaattttatttagcacactattgac 7048752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 211 - 299
Target Start/End: Original strand, 26502797 - 26502885
Alignment:
Q  211 ggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacaca 299  Q
    ||||| ||||||| |||||||| ||| |||| ||||||||||||||   |||||||| ||||  | ||||||||||| |||||||||||    
T  26502797 ggttccaccgtgtggcgaccccaggcagtcgcccgggctcgatcgaatttttttgcatattaagcccaacccaaaagcccattaacaca 26502885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 211 - 299
Target Start/End: Complemental strand, 26589917 - 26589829
Alignment:
Q  211 ggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacaca 299  Q
    ||||| ||||||| |||||||| ||| |||| ||||||||||||||   |||||||| ||||  | ||||||||||| |||||||||||    
T  26589917 ggttccaccgtgtggcgaccccaggcagtcgcccgggctcgatcgaatttttttgcatattaagcccaacccaaaagcccattaacaca 26589829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 283 - 350
Target Start/End: Complemental strand, 10868583 - 10868514
Alignment:
Q  283 aaaagtccattaacacatttacaaaacgaaaaatttgggc--aatttgaaaattgtcacacgtaaatagg 350  Q
    ||||| |||||||||||||||||||| |||||||||||||  ||| |||||||| |||| || |||||||    
T  10868583 aaaagcccattaacacatttacaaaaagaaaaatttgggcaaaatctgaaaattctcacgcgcaaatagg 10868514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 269
Target Start/End: Complemental strand, 10876861 - 10876829
Alignment:
Q  237 ggtcgtccgggctcgatcgataatttttgcaca 269  Q
    ||||| |||||||||||||||||||||||||||    
T  10876861 ggtcgcccgggctcgatcgataatttttgcaca 10876829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 146; Significance: 8e-77; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 204 - 377
Target Start/End: Complemental strand, 36293808 - 36293635
Alignment:
Q  204 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacattta 303  Q
    |||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  36293808 catgggcggttctaccgtgtggcgaccccgagcggtcgtccggactcgatcgataatttttgtacattagactcaacccaaaagcccattaacacattta 36293709  T
Q  304 caaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactatt 377  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36293708 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactatt 36293635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 203 - 380
Target Start/End: Original strand, 39434675 - 39434852
Alignment:
Q  203 tcatgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacattt 302  Q
    ||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  39434675 tcatgggcggttctaccgtgtggcgaccctgggcggtcgcccgggctcgatcgataattttttcacattagactcaacccaaaagcccattaacacattt 39434774  T
Q  303 acaaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    |||||| |||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  39434775 acaaaatgaaaaatttgggcaatctgaaaattgtcacatgtaaataggtctttgaattttatttagcacactattgac 39434852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 207 - 380
Target Start/End: Original strand, 10033910 - 10034083
Alignment:
Q  207 gggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaa 306  Q
    ||||||||||||||| | |||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10033910 gggcggttctaccgtatggcgaccccggacgatcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaa 10034009  T
Q  307 aacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    || |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  10034010 aaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgac 10034083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 207 - 380
Target Start/End: Original strand, 13817960 - 13818133
Alignment:
Q  207 gggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaa 306  Q
    ||||||||||||||| | |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13817960 gggcggttctaccgtatggcgaccccgggcggtcgctcgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaa 13818059  T
Q  307 aacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    || |||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  13818060 aaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaaatttatttagcacactattgac 13818133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 204 - 380
Target Start/End: Complemental strand, 26283505 - 26283329
Alignment:
Q  204 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacattta 303  Q
    |||||||||||| ||||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  26283505 catgggcggttccaccgtgtagcgacctcgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagttcattaacacattta 26283406  T
Q  304 caaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
     |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  26283405 taaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgac 26283329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 208 - 376
Target Start/End: Complemental strand, 1776559 - 1776391
Alignment:
Q  208 ggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaa 307  Q
    |||||||||||||| |  |||||||||||||||| ||||||||||||||||||||||| |||||| | |||||| |||||||||||||||||||||||||    
T  1776559 ggcggttctaccgtatgacgaccccgggcggtcgcccgggctcgatcgataatttttgtacattaaagtcaaccaaaaagtccattaacacatttacaaa 1776460  T
Q  308 acgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactat 376  Q
    | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1776459 aagaaaaatttgggcaatttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactat 1776391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 204 - 380
Target Start/End: Complemental strand, 39657693 - 39657517
Alignment:
Q  204 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacattta 303  Q
    |||||||||||||||  | | |||||||| | ||||||| |||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||    
T  39657693 catgggcggttctactatatggcgaccccagacggtcgttcgggctcgattgataatttttgcacattagactcaacccaaaagctcattaacacattta 39657594  T
Q  304 caaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    ||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  39657593 caaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgac 39657517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 243 - 380
Target Start/End: Original strand, 16155016 - 16155153
Alignment:
Q  243 ccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaatttgaaaattgtcacacg 342  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||| |||||| ||||||||||||||||    
T  16155016 ccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttaggcaatctgaaaattgtcacacg 16155115  T
Q  343 taaataggtcttggaattttatttagcacactattgac 380  Q
     |||||||||||||||||||||||||||||||||||||    
T  16155116 caaataggtcttggaattttatttagcacactattgac 16155153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 204 - 375
Target Start/End: Complemental strand, 3155818 - 3155647
Alignment:
Q  204 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacattta 303  Q
    |||||||||||||| ||| | |||| ||||||||||||  ||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||    
T  3155818 catgggcggttctatcgtatggcgatcccgggcggtcgctcgggctcgatcaataatttttgcacattcgactcaacctaaaagtccattaacacattta 3155719  T
Q  304 caaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacacta 375  Q
     |||| ||||||||||| |||| |||||||||||||||| |||||| |||||||||||||||||||||||||    
T  3155718 taaaaagaaaaatttggacaatctgaaaattgtcacacgcaaatagatcttggaattttatttagcacacta 3155647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 225 - 380
Target Start/End: Complemental strand, 17332717 - 17332562
Alignment:
Q  225 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaa 324  Q
    ||||||||||||| ||| ||||||||||||||||||||||||| ||||||| ||||||||||| | ||||||||| |||||||| |||||||||||||||    
T  17332717 gcgaccccgggcgttcgcccgggctcgatcgataatttttgcatattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaa 17332618  T
Q  325 tttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    | |||||||| ||||||| |||||||||| ||||||||||||||||||||||||||    
T  17332617 tctgaaaattttcacacgcaaataggtctcggaattttatttagcacactattgac 17332562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 225 - 380
Target Start/End: Original strand, 37254642 - 37254797
Alignment:
Q  225 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaa 324  Q
    |||||||| |||||||| || |||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  37254642 gcgaccccaggcggtcgcccaggctcgatcgataatttttgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaa 37254741  T
Q  325 tttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    | |||||||| ||||||| |||||||||| |||||||||||||||||| |||||||    
T  37254742 tctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgac 37254797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 254 - 380
Target Start/End: Complemental strand, 16334013 - 16333887
Alignment:
Q  254 cgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtct 353  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||    
T  16334013 cgataatttttgcacattagattcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtct 16333914  T
Q  354 tggaattttatttagcacactattgac 380  Q
    |||||||||||||||||||||||||||    
T  16333913 tggaattttatttagcacactattgac 16333887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 226 - 380
Target Start/End: Original strand, 19985941 - 19986095
Alignment:
Q  226 cgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaat 325  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||| |||    
T  19985941 cgacctcgggcggtcgtccgagctcgatcgataatttttgcacattagattcaacccaaaagtccattagcacatttacaaaaagaaaaatttgggtaat 19986040  T
Q  326 ttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
     | |||||| ||||||| |||||||||||| ||||||||||| ||||||||||||    
T  19986041 ctaaaaattatcacacgcaaataggtcttgaaattttatttaacacactattgac 19986095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 225 - 380
Target Start/End: Complemental strand, 12279026 - 12278871
Alignment:
Q  225 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaa 324  Q
    |||| |||||||||||| |||| |||||||||||||||||||||||||||| ||||||||| | | ||||||||| |||||||| |||||||||||||||    
T  12279026 gcgatcccgggcggtcgcccggactcgatcgataatttttgcacattagacccaacccaaaggccaattaacacacttacaaaaagaaaaatttgggcaa 12278927  T
Q  325 tttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    | |||||||| ||||||| |||||||||| ||||||||||||||||||||||||||    
T  12278926 tctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgac 12278871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 225 - 380
Target Start/End: Original strand, 31680368 - 31680523
Alignment:
Q  225 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaa 324  Q
    ||||||||||||||||| |||||||||||||||||||||| | |||||||| ||||||||||| | ||||||||| |||||||| |||||||||||||||    
T  31680368 gcgaccccgggcggtcgcccgggctcgatcgataatttttccgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaa 31680467  T
Q  325 tttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    | |||||||| ||||| | |||||||||| ||||||||||||||||||||||||||    
T  31680468 tctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgac 31680523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 225 - 379
Target Start/End: Complemental strand, 31501882 - 31501728
Alignment:
Q  225 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaa 324  Q
    ||||||||||||| | | ||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| |||||||||||||||    
T  31501882 gcgaccccgggcgattgcccgggctcgatcgataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaa 31501783  T
Q  325 tttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattga 379  Q
    | |||||||| || |||| |||||||||| | |||||||||||||||||||||||    
T  31501782 tctgaaaattctcgcacgcaaataggtctcgaaattttatttagcacactattga 31501728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 238 - 380
Target Start/End: Original strand, 33430335 - 33430477
Alignment:
Q  238 gtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaatttgaaaattgtc 337  Q
    |||| |||||||||||||||||||||||| |||||||| ||||||||||| | ||||||||| |||||||| |||||||||||||||| |||||||| ||    
T  33430335 gtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctc 33430434  T
Q  338 acacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    ||||| |||||||||| ||||||||||||||||||||||||||    
T  33430435 acacgcaaataggtctcggaattttatttagcacactattgac 33430477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 241 - 378
Target Start/End: Original strand, 43068894 - 43069031
Alignment:
Q  241 gtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaatttgaaaattgtcaca 340  Q
    |||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| | |||    
T  43068894 gtccgggctcgatcaataattttttcacattagacccaacccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattcttaca 43068993  T
Q  341 cgtaaataggtcttggaattttatttagcacactattg 378  Q
     ||||||| |||| ||||||||||||||||||||||||    
T  43068994 tgtaaataagtctcggaattttatttagcacactattg 43069031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 226 - 380
Target Start/End: Original strand, 36291373 - 36291527
Alignment:
Q  226 cgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaat 325  Q
    |||| ||||||||||||||||| |||||| |||||||||||||||||||   |||| |||||| ||||||||||||||||||| ||||||||||||||||    
T  36291373 cgactccgggcggtcgtccgggttcgatcaataatttttgcacattagatctaacctaaaagttcattaacacatttacaaaaagaaaaatttgggcaat 36291472  T
Q  326 ttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
     | |||||| | ||||  ||||||||||  |||||||||||| ||||||||||||    
T  36291473 ctcaaaattattacacacaaataggtctcagaattttatttaacacactattgac 36291527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 237 - 350
Target Start/End: Original strand, 28801300 - 28801415
Alignment:
Q  237 ggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttggg--caatttgaaaatt 334  Q
    ||||| || |||||||||||||||||||||||||||||  ||| ||||||| ||||||||||| |||||||| ||||||||||||   ||| ||||||||    
T  28801300 ggtcgccctggctcgatcgataatttttgcacattagatccaaaccaaaagcccattaacacacttacaaaaagaaaaatttgggaaaaatatgaaaatt 28801399  T
Q  335 gtcacacgtaaatagg 350  Q
     ||||||| |||||||    
T  28801400 ctcacacgcaaatagg 28801415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 260
Target Start/End: Original strand, 14316641 - 14316694
Alignment:
Q  207 gggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataat 260  Q
    ||||||||||||||| | |||| | |||||||||| || |||||||||||||||    
T  14316641 gggcggttctaccgtatggcgatctcgggcggtcgcccaggctcgatcgataat 14316694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 146; Significance: 8e-77; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 203 - 380
Target Start/End: Original strand, 20129289 - 20129466
Alignment:
Q  203 tcatgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacattt 302  Q
    ||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  20129289 tcatgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattt 20129388  T
Q  303 acaaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  20129389 acaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttagaattttatttggcacactattgac 20129466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 203 - 380
Target Start/End: Original strand, 25930687 - 25930864
Alignment:
Q  203 tcatgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacattt 302  Q
    ||||||||||||||||||| | ||||||| ||||||||| |||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||    
T  25930687 tcatgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatctataatttttgcacattaaactcaacccaaaagcccattaacacattt 25930786  T
Q  303 acaaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  25930787 acaaaaagaaaaatttgggcaatttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgac 25930864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 204 - 380
Target Start/End: Original strand, 13012168 - 13012344
Alignment:
Q  204 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacattta 303  Q
    |||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||  ||||||||||||||    
T  13012168 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagattcaaccaaaaagctcattaacacattta 13012267  T
Q  304 caaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
     |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  13012268 taaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgac 13012344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 204 - 380
Target Start/End: Original strand, 47500753 - 47500929
Alignment:
Q  204 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacattta 303  Q
    |||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  47500753 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattta 47500852  T
Q  304 caaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
      ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  47500853 tgaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgac 47500929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 203 - 380
Target Start/End: Complemental strand, 26439467 - 26439290
Alignment:
Q  203 tcatgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacattt 302  Q
    ||||||||||||| ||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  26439467 tcatgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacattt 26439368  T
Q  303 acaaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    | |||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||    
T  26439367 ataaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgac 26439290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 204 - 380
Target Start/End: Complemental strand, 34407471 - 34407295
Alignment:
Q  204 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacattta 303  Q
    |||||||||||| ||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  34407471 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacattta 34407372  T
Q  304 caaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
     |||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||    
T  34407371 taaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgac 34407295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 208 - 380
Target Start/End: Complemental strand, 36382528 - 36382357
Alignment:
Q  208 ggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaa 307  Q
    |||||||||||||| | ||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  36382528 ggcggttctaccgtatggcgaccccgggcggtcgcccgggctcgatccataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaa 36382429  T
Q  308 acgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    | ||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  36382428 a-gaaaaatttggacaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgac 36382357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 204 - 380
Target Start/End: Complemental strand, 29319892 - 29319716
Alignment:
Q  204 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacattta 303  Q
    |||||||||||||||||| | | |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  29319892 catgggcggttctaccgtatggtgacccctggcggtcgtccaggctcgatcgataatttttgcacattagactcaacccaaaatcccattaacacattta 29319793  T
Q  304 caaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    ||||| |||||||||| ||||| |||||||||||||||  ||||| |||||||||||||||||||||||||||||||    
T  29319792 caaaaagaaaaatttgagcaatctgaaaattgtcacacacaaataagtcttggaattttatttagcacactattgac 29319716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 204 - 380
Target Start/End: Original strand, 43355884 - 43356060
Alignment:
Q  204 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacattta 303  Q
    |||||||||||| ||||||| |||||||| ||| |||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  43355884 catgggcggttccaccgtgtagcgaccccaggcagtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacattta 43355983  T
Q  304 caaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
     |||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||    
T  43355984 taaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgac 43356060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 207 - 379
Target Start/End: Complemental strand, 17511417 - 17511245
Alignment:
Q  207 gggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaa 306  Q
    ||||||||||||||| | ||||||| || |||||| || | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  17511417 gggcggttctaccgtatggcgaccctgg-cggtcgcccagactcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaa 17511319  T
Q  307 aacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttgg-aattttatttagcacactattga 379  Q
    || ||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||| ||||||    
T  17511318 aaagaaaaatttgggcaatttgaaaattgttacacgcaaataggtcttggaaattttatttagcacattattga 17511245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 226 - 379
Target Start/End: Complemental strand, 43143749 - 43143596
Alignment:
Q  226 cgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaat 325  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||| ||||||||||||||||    
T  43143749 cgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaat 43143650  T
Q  326 ttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattga 379  Q
     |||||||| ||||||| |||||||||| ||||||||||||||||||| |||||    
T  43143649 ctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 43143596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 207 - 380
Target Start/End: Original strand, 40528996 - 40529171
Alignment:
Q  207 gggcggttctaccgtgtcgcgaccccgggcg--gtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttac 304  Q
    ||||||||||||||| | ||||||| |||||  ||||||||| ||||||||||||||||||||||||| |||||||| ||||   |||||||||||||||    
T  40528996 gggcggttctaccgtatggcgaccctgggcgaggtcgtccggactcgatcgataatttttgcacattaaactcaacctaaaaactcattaacacatttac 40529095  T
Q  305 aaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    |||| ||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  40529096 aaaaagaaaaatttggacaatttgaaaattgtcacatgcaaataggtcttggaattttatttagcacactattgac 40529171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 225 - 379
Target Start/End: Complemental strand, 42333942 - 42333788
Alignment:
Q  225 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaa 324  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||| |||||||| |||||||||||||||    
T  42333942 gcgatcccgggcggtcgtccgggctcaatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaa 42333843  T
Q  325 tttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattga 379  Q
    | |||||||| ||||||| |||||||||| ||||||||||||||||||| |||||    
T  42333842 tctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 42333788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 227 - 380
Target Start/End: Complemental strand, 3293060 - 3292907
Alignment:
Q  227 gaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaatt 326  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||| | ||||||||| |||||||| ||||||||||||||||     
T  3293060 gaccccgggcggtcgcccgggctcgatcgataatttttgcccattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatc 3292961  T
Q  327 tgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    |||||||| ||||||| |||||||||| ||||||||||||||||||||||||||    
T  3292960 tgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgac 3292907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 225 - 373
Target Start/End: Complemental strand, 10353050 - 10352902
Alignment:
Q  225 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaa 324  Q
    |||||||| |||||||| |||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||    
T  10353050 gcgacccctggcggtcgcccgggctcaatcgataatttttgcacattagacccaaccaaaaagtccattaacacatttacaaaaggaaaaatttgggcaa 10352951  T
Q  325 tttgaaaattgtcacacgtaaataggtcttggaattttatttagcacac 373  Q
    | |||||||| | ||||| |||||||||| |||||||||||||||||||    
T  10352950 tctgaaaattcttacacgcaaataggtctcggaattttatttagcacac 10352902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 225 - 380
Target Start/End: Complemental strand, 6690401 - 6690246
Alignment:
Q  225 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaa 324  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||| | ||||||||| |||||||| |||||||||||||||    
T  6690401 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaa 6690302  T
Q  325 tttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
      |||||||| ||||||| |||||||||| | ||||||||||||||||||||||||    
T  6690301 actgaaaattctcacacgcaaataggtctcgaaattttatttagcacactattgac 6690246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 225 - 380
Target Start/End: Complemental strand, 30216908 - 30216753
Alignment:
Q  225 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaa 324  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||   ||||||||| |||||||| |||||||||||||||    
T  30216908 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacccaaaagctaattaacacacttacaaaaagaaaaatttgggcaa 30216809  T
Q  325 tttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    | |||||||| ||||| | |||||| ||| ||||||||||||||||||||||||||    
T  30216808 tctgaaaattctcacatgcaaatagatctcggaattttatttagcacactattgac 30216753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 225 - 380
Target Start/End: Complemental strand, 50205243 - 50205088
Alignment:
Q  225 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaa 324  Q
    |||| |||||||||||| ||| ||||||||||||||||||||||||||||  ||||||||||| | ||||||||| |||||||| |||||| |||| |||    
T  50205243 gcgatcccgggcggtcgcccgagctcgatcgataatttttgcacattagatccaacccaaaagccaattaacacacttacaaaaagaaaaaattggacaa 50205144  T
Q  325 tttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    | |||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  50205143 tctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgac 50205088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 226 - 380
Target Start/End: Original strand, 48989330 - 48989484
Alignment:
Q  226 cgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaat 325  Q
    |||| ||||||||||  ||||| |||||||||||||||||||||||| || |||| |||||||||||||||||| |||||||| ||||||||||||||||    
T  48989330 cgactccgggcggtcaaccgggttcgatcgataatttttgcacattaaacccaactcaaaagtccattaacacacttacaaaaagaaaaatttgggcaat 48989429  T
Q  326 ttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
     |||||||| ||| ||| |||||||||| ||||||||||||||||||||||||||    
T  48989430 ctgaaaattctcatacgcaaataggtctcggaattttatttagcacactattgac 48989484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 230 - 380
Target Start/End: Complemental strand, 29996144 - 29995994
Alignment:
Q  230 cccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaatttga 329  Q
    ||||| ||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||| |||    
T  29996144 cccggacggtcgtccggactcgatcgataatttttgtacattagactcaaccaaaaagtccattaacacatttacgaaaagaaaaatttgggcaatctga 29996045  T
Q  330 aaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    ||||| |  |||| |||||| ||| ||||||||||| ||||||||||||||    
T  29996044 aaattcttgcacgcaaatagttctcggaattttattaagcacactattgac 29995994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 279 - 380
Target Start/End: Original strand, 6235575 - 6235676
Alignment:
Q  279 acccaaaagtccattaacacatttacaaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattg 378  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6235575 acccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattg 6235674  T
Q  379 ac 380  Q
    ||    
T  6235675 ac 6235676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 224 - 375
Target Start/End: Complemental strand, 30077798 - 30077647
Alignment:
Q  224 cgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggca 323  Q
    ||||||| |||||||||| || ||||| |||||||| ||||||||||||||| ||||| |||||| ||||||||||||||||||| ||||||||||| ||    
T  30077798 cgcgacctcgggcggtcgcccaggctcaatcgataaattttgcacattagacccaaccaaaaagttcattaacacatttacaaaaagaaaaatttggaca 30077699  T
Q  324 atttgaaaattgtcacacgtaaataggtcttggaattttatttagcacacta 375  Q
    || |||||||| | ||||  |||||||||||| |||||||||||||||||||    
T  30077698 atctgaaaatttttacacacaaataggtcttgaaattttatttagcacacta 30077647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 243 - 380
Target Start/End: Original strand, 44156670 - 44156807
Alignment:
Q  243 ccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaatttgaaaattgtcacacg 342  Q
    |||||||| | |||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||| ||||| |||| |||||||| || ||||    
T  44156670 ccgggctcaaccgataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaattttggacaatctgaaaattctctcacg 44156769  T
Q  343 taaataggtcttggaattttatttagcacactattgac 380  Q
     |||||||||| ||||||||||||||||||||||||||    
T  44156770 caaataggtctcggaattttatttagcacactattgac 44156807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 225 - 378
Target Start/End: Original strand, 26448054 - 26448206
Alignment:
Q  225 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaa 324  Q
    ||||| ||| ||| |||||||| ||||||||||||||||||||||||| |   |||||||||||||||||||||| ||||||||  ||||||||||||||    
T  26448054 gcgactccgtgcgatcgtccggactcgatcgataatttttgcacattaaatctaacccaaaagtccattaacacacttacaaaa-aaaaaatttgggcaa 26448152  T
Q  325 tttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattg 378  Q
    | |||||||| ||| ||  |||||||| | ||||||||||||||||||||||||    
T  26448153 tctgaaaattctcatacacaaataggtttcggaattttatttagcacactattg 26448206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 227 - 379
Target Start/End: Complemental strand, 28877414 - 28877262
Alignment:
Q  227 gaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaatt 326  Q
    ||||||| |||||||   ||||| |||||||||||||||||||||||| |||||| |||||   ||||||||  ||| |||| |||||||||||| |||     
T  28877414 gaccccgtgcggtcgcttgggctagatcgataatttttgcacattagattcaacctaaaagctaattaacacgcttataaaaagaaaaatttgggaaatc 28877315  T
Q  327 tgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattga 379  Q
    | |||||| ||||||| |||||||||| |||||||||||||||||||||||||    
T  28877314 taaaaattctcacacgcaaataggtctcggaattttatttagcacactattga 28877262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 248 - 379
Target Start/End: Original strand, 35545977 - 35546108
Alignment:
Q  248 ctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaat 347  Q
    ||||||||| ||||||||| ||| |||| ||||||||||| | ||||||||| |||||||| ||||| |||||||||| |||||||| ||||||| ||||    
T  35545977 ctcgatcgacaatttttgcgcatcagacccaacccaaaagccaattaacacacttacaaaaagaaaattttgggcaatctgaaaattctcacacgcaaat 35546076  T
Q  348 aggtcttggaattttatttagcacactattga 379  Q
     |||||  ||||||||||||||||||||||||    
T  35546077 gggtctctgaattttatttagcacactattga 35546108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 259 - 378
Target Start/End: Original strand, 1817752 - 1817871
Alignment:
Q  259 atttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaa 358  Q
    ||||||||||||||||  ||| ||||||||||||||| ||||||| |||| |||||||||||||||| | |||||| | ||||| |||||||||| ||||    
T  1817752 atttttgcacattagatccaatccaaaagtccattaatacatttataaaaagaaaaatttgggcaatctaaaaattcttacacgcaaataggtctcggaa 1817851  T
Q  359 ttttatttagcacactattg 378  Q
    ||||||||| ||||||||||    
T  1817852 ttttatttaacacactattg 1817871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 226 - 350
Target Start/End: Original strand, 30109958 - 30110084
Alignment:
Q  226 cgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggc--a 323  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||||||| ||| || |||| ||||||||||| |||||||| ||||||||||| |  |    
T  30109958 cgaccccggacggtcgcccggactcgatcgataatttttgcacattagacccaaacccaaagaccattaacacacttacaaaaagaaaaatttggacaaa 30110057  T
Q  324 atttgaaaattgtcacacgtaaatagg 350  Q
    || |||||| | ||||||| |||||||    
T  30110058 atatgaaaaatctcacacgcaaatagg 30110084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 236 - 321
Target Start/End: Original strand, 48129978 - 48130063
Alignment:
Q  236 cggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttggg 321  Q
    |||||| ||||||||||||||||||||||||| ||||||| |||||||||||  |||||||||| |||||||| ||||||||||||    
T  48129978 cggtcgaccgggctcgatcgataatttttgcatattagacccaacccaaaagctcattaacacacttacaaaaagaaaaatttggg 48130063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 226 - 308
Target Start/End: Original strand, 45194178 - 45194260
Alignment:
Q  226 cgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaa 308  Q
    ||||||| |||| | | |||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  45194178 cgaccccaggcgattgcccggactcgatcaataatttttgcacattaaactcaacccaaaagtccattaacacacttacaaaa 45194260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 302 - 379
Target Start/End: Complemental strand, 13392970 - 13392893
Alignment:
Q  302 tacaaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattga 379  Q
    ||||||| |||||||||||||||| | |||||| ||||||| |||||||||| | |||||||||||||||||||||||    
T  13392970 tacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcgaaattttatttagcacactattga 13392893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 302 - 379
Target Start/End: Complemental strand, 13396109 - 13396032
Alignment:
Q  302 tacaaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattga 379  Q
    ||||||| |||||||||||||||| | |||||| ||||||| |||||||||| | |||||||||||||||||||||||    
T  13396109 tacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcgaaattttatttagcacactattga 13396032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 207 - 308
Target Start/End: Original strand, 27363344 - 27363445
Alignment:
Q  207 gggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaa 306  Q
    |||||||| |||||| | |||||| |||||||||| ||||||||||||||   |||||||| ||||| | ||||||||||| ||||||||||| ||||||    
T  27363344 gggcggttttaccgtatggcgacctcgggcggtcgcccgggctcgatcgaatttttttgcatattaggcccaacccaaaagcccattaacacacttacaa 27363443  T
Q  307 aa 308  Q
    ||    
T  27363444 aa 27363445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 6254569 - 6254637
Alignment:
Q  249 tcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatt 317  Q
    |||||||||||||||||||||||| || ||||||||||| | ||||||||| || |||||  |||||||    
T  6254569 tcgatcgataatttttgcacattaaacccaacccaaaagacaattaacacacttgcaaaaaaaaaaatt 6254637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 7769308 - 7769369
Alignment:
Q  204 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttg 265  Q
    |||||||||||  |||||   |||||||| |||||||| |||||||||||||||||||||||    
T  7769308 catgggcggtttcaccgtccggcgaccccaggcggtcgcccgggctcgatcgataatttttg 7769369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 261
Target Start/End: Complemental strand, 49908818 - 49908782
Alignment:
Q  225 gcgaccccgggcggtcgtccgggctcgatcgataatt 261  Q
    ||||||||||||||||| |||||||||||||||||||    
T  49908818 gcgaccccgggcggtcgcccgggctcgatcgataatt 49908782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 261
Target Start/End: Complemental strand, 5517530 - 5517494
Alignment:
Q  225 gcgaccccgggcggtcgtccgggctcgatcgataatt 261  Q
    ||||||||||||||||| | |||||||||||||||||    
T  5517530 gcgaccccgggcggtcgcctgggctcgatcgataatt 5517494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 145; Significance: 3e-76; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 204 - 380
Target Start/End: Original strand, 17822 - 17998
Alignment:
Q  204 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacattta 303  Q
    |||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  17822 catgggcggttctaccgtgtggcgaccccgagcgatcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 17921  T
Q  304 caaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    ||||| |||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  17922 caaaaagaaaaatttgggcaatctgaaaattgtcacatgtaaataggtcttgaaattttatttagcacactattgac 17998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 141; Significance: 8e-74; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 204 - 380
Target Start/End: Complemental strand, 480644 - 480468
Alignment:
Q  204 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacattta 303  Q
    |||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  480644 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattta 480545  T
Q  304 caaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
     |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  480544 taaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgac 480468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 141; Significance: 8e-74; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 204 - 380
Target Start/End: Original strand, 398597 - 398773
Alignment:
Q  204 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacattta 303  Q
    |||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  398597 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattta 398696  T
Q  304 caaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
     |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  398697 taaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgac 398773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 204 - 380
Target Start/End: Complemental strand, 34948945 - 34948769
Alignment:
Q  204 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacattta 303  Q
    |||||||||||||||||| | |||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  34948945 catgggcggttctaccgtatggcgaccccaggcggtcgcccaggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 34948846  T
Q  304 caaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    ||||| |||||||||||||||| |||||||||||||||  |||||| ||||| ||||||||||||||||||||||||    
T  34948845 caaaaagaaaaatttgggcaatctgaaaattgtcacacacaaatagatcttgaaattttatttagcacactattgac 34948769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 203 - 380
Target Start/End: Original strand, 13837800 - 13837977
Alignment:
Q  203 tcatgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacattt 302  Q
    ||||||||||||||||||| | ||||||||||||| |||  |||| ||||||||||||||||| |||||||||||||||||||||  ||| |||||||||    
T  13837800 tcatgggcggttctaccgtatggcgaccccgggcgatcgctcgggttcgatcgataatttttgtacattagactcaacccaaaagcacatcaacacattt 13837899  T
Q  303 acaaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  13837900 acaaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgac 13837977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 225 - 380
Target Start/End: Original strand, 28996731 - 28996886
Alignment:
Q  225 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaa 324  Q
    ||||||||||||||||| ||| |||||||||||||||||||| |||||||| ||||| ||||||| ||||||||| |||||||| |||||||||||||||    
T  28996731 gcgaccccgggcggtcgcccgagctcgatcgataatttttgcgcattagacccaacctaaaagtcaattaacacacttacaaaaagaaaaatttgggcaa 28996830  T
Q  325 tttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    | |||||||| ||||||| |||||||||| ||||||||||||||||||||||||||    
T  28996831 tctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgac 28996886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 225 - 380
Target Start/End: Original strand, 18339107 - 18339262
Alignment:
Q  225 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaa 324  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||| ||| | ||||| | ||||||||| |||||||| ||||| |||||||||    
T  18339107 gcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattagacccaatctaaaagccaattaacacacttacaaaaagaaaattttgggcaa 18339206  T
Q  325 tttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    | |||||||| ||||| | |||||||||| ||||||||||||||||||||||||||    
T  18339207 tctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgac 18339262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 230 - 375
Target Start/End: Original strand, 29743289 - 29743434
Alignment:
Q  230 cccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaatttga 329  Q
    |||||||||| | |||||||| |||||||||||||||||||||||| ||||| |||||| |||||||||||||||| || |||||||||||||||| |||    
T  29743289 cccgggcggttgcccgggctcaatcgataatttttgcacattagacccaaccaaaaagttcattaacacatttacagaaagaaaaatttgggcaatctga 29743388  T
Q  330 aaattgtcacacgtaaataggtcttggaattttatttagcacacta 375  Q
    ||||| | ||||| |||||||||| |||||||||||||||||||||    
T  29743389 aaattcttacacgcaaataggtctcggaattttatttagcacacta 29743434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 243 - 378
Target Start/End: Complemental strand, 33229484 - 33229349
Alignment:
Q  243 ccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaatttgaaaattgtcacacg 342  Q
    ||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||| | |||||    
T  33229484 ccgggctcgatcgatcatttttgtacattagacccaacccaaaagtccattaacacatttccaaaaagaaaaatttgggcaatctgaaaattcttacacg 33229385  T
Q  343 taaataggtcttggaattttatttagcacactattg 378  Q
    |||||| |||| || |||||||||||||||||||||    
T  33229384 taaataagtctcgggattttatttagcacactattg 33229349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 225 - 308
Target Start/End: Complemental strand, 31028530 - 31028447
Alignment:
Q  225 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaa 308  Q
    ||||||||| ||||| | |||| |||||||||||||||||||||||||||  ||||| |||||  |||||||||||||||||||    
T  31028530 gcgaccccgagcggttgcccggactcgatcgataatttttgcacattagatccaacctaaaagctcattaacacatttacaaaa 31028447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 225 - 308
Target Start/End: Complemental strand, 24697983 - 24697900
Alignment:
Q  225 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaa 308  Q
    |||||||||| |  ||| |||||||| ||||||||||||| |||||||| | ||||||||||| ||||||||||| ||||||||    
T  24697983 gcgaccccggacactcgcccgggctcaatcgataattttttcacattaggcccaacccaaaagcccattaacacacttacaaaa 24697900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 308
Target Start/End: Original strand, 24695515 - 24695571
Alignment:
Q  252 atcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaa 308  Q
    |||||| ||||||  ||||||| ||||||||||||| ||||||||||| ||||||||    
T  24695515 atcgatcattttttaacattaggctcaacccaaaagcccattaacacacttacaaaa 24695571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 260
Target Start/End: Original strand, 13647018 - 13647053
Alignment:
Q  225 gcgaccccgggcggtcgtccgggctcgatcgataat 260  Q
    ||||||||||||||||| ||||||||||||||||||    
T  13647018 gcgaccccgggcggtcgcccgggctcgatcgataat 13647053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 141; Significance: 8e-74; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 204 - 380
Target Start/End: Original strand, 26144235 - 26144411
Alignment:
Q  204 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacattta 303  Q
    |||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  26144235 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattta 26144334  T
Q  304 caaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
     |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  26144335 taaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgac 26144411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 204 - 380
Target Start/End: Original strand, 7433425 - 7433601
Alignment:
Q  204 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacattta 303  Q
    |||||||||||||||||| | || |||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  7433425 catgggcggttctaccgtatggcaaccccgggcggtcgcccgagctcgatctataatttttgcacattagactcaacccaaaagcccattaacacattta 7433524  T
Q  304 caaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    ||||| ||||| |||||||||| | |||||||||||||  |||||||||||| ||||||||||||||||||||||||    
T  7433525 caaaaagaaaattttgggcaatctaaaaattgtcacacacaaataggtcttgaaattttatttagcacactattgac 7433601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 207 - 380
Target Start/End: Complemental strand, 42311125 - 42310952
Alignment:
Q  207 gggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaa 306  Q
    ||||||||||||||| | |||||||| | || ||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  42311125 gggcggttctaccgtatggcgaccccagacgatcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccgttaacacatttacaa 42311026  T
Q  307 aacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    || |||||||||||||||| |||||||||||||||| ||||| |||||| |||||||||||| || ||||||||    
T  42311025 aaagaaaaatttgggcaatctgaaaattgtcacacgcaaataagtcttgaaattttatttagtacgctattgac 42310952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 211 - 380
Target Start/End: Complemental strand, 32982236 - 32982067
Alignment:
Q  211 ggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacg 310  Q
    ||||||||||| | |||||||||||||||||  ||||| |||||||||||||||||||||||||| ||||| ||||| ||||||||| |||||||||| |    
T  32982236 ggttctaccgtatggcgaccccgggcggtcgcgcgggcccgatcgataatttttgcacattagacccaacctaaaagcccattaacatatttacaaaaag 32982137  T
Q  311 aaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    |||||||||| |||| |||||||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  32982136 aaaaatttggacaatctgaaaattgtcacacacaaataggtcttggaattttatttagcactctattgac 32982067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 232 - 380
Target Start/End: Complemental strand, 321536 - 321388
Alignment:
Q  232 cgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaatttgaaa 331  Q
    ||||||||||||||||||||||||||||||||||  |||||||  ||||||||||||||||||||||| |||||||| |||||||||||||||| |||||    
T  321536 cgggcggtcgtccgggctcgatcgataatttttgtgcattagatccaacccaaaagtccattaacacagttacaaaaagaaaaatttgggcaatctgaaa 321437  T
Q  332 attgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    ||| ||| | | |||||||||| ||||||||||||| |||| |||||||    
T  321436 attctcatatgcaaataggtctcggaattttatttaacacattattgac 321388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 228 - 380
Target Start/End: Original strand, 3828988 - 3829139
Alignment:
Q  228 accccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaattt 327  Q
    ||||||| ||||||  |||| |||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||| |||||||||||||||| |    
T  3828988 accccggacggtcgctcgggttcgatcgataatttttgcacattaaacccaacccaaaagttcattaacacacttacaaaaagaaaaatttgggcaatct 3829087  T
Q  328 gaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    ||||||| ||| ||| ||||||||| |||||||||||||||||||||||||||    
T  3829088 gaaaattttcatacgcaaataggtc-tggaattttatttagcacactattgac 3829139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 225 - 380
Target Start/End: Original strand, 17445314 - 17445469
Alignment:
Q  225 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaa 324  Q
    ||||||||  ||||||| ||||||| |||| |||||||||| ||||||||  ||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  17445314 gcgaccccatgcggtcgcccgggctggatcaataatttttgtacattagatccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaa 17445413  T
Q  325 tttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    | |||||||| ||||||| |||||||||| |||||||||||||||||| |||||||    
T  17445414 tctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgac 17445469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 225 - 380
Target Start/End: Original strand, 35907553 - 35907708
Alignment:
Q  225 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaa 324  Q
    |||||| |||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||| | ||||  ||| |||||||| ||||| |||||| ||    
T  35907553 gcgacctcgggcggtcgcccgggcttgatcgataatttttgcacattagacccaacccaaaagccaattagtacacttacaaaaagaaaattttgggtaa 35907652  T
Q  325 tttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    | |||||||| ||||||| |||||||||| |||||||||||||||||| |||||||    
T  35907653 tctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgac 35907708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 204 - 330
Target Start/End: Original strand, 23313218 - 23313345
Alignment:
Q  204 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataattt-ttgcacattagactcaacccaaaagtccattaacacattt 302  Q
    |||||||||||||||||| | |||| | |||||||| | ||||||||||| ||| |||| ||||||||||||||||||  |||||| |||||||||||||    
T  23313218 catgggcggttctaccgtatggcgatctcgggcggttgcccgggctcgattgatgatttgttgcacattagactcaacataaaagttcattaacacattt 23313317  T
Q  303 acaaaacgaaaaatttgggcaatttgaa 330  Q
    |||||| |||||||||||||||| ||||    
T  23313318 acaaaaagaaaaatttgggcaatctgaa 23313345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 207 - 350
Target Start/End: Complemental strand, 41972458 - 41972314
Alignment:
Q  207 gggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaa 306  Q
    ||||||||| |||||   ||||||||||||||||| || |||||||||||||||||||||||||||||  ||||| ||||| | ||||||||| ||||||    
T  41972458 gggcggttccaccgtccagcgaccccgggcggtcg-cctggctcgatcgataatttttgcacattagatccaacctaaaagcctattaacacacttacaa 41972360  T
Q  307 aacgaaaaatttgg--gcaatttgaaaattgtcacacgtaaatagg 350  Q
    || |||||||||||    ||| |||||||| ||||||| |||||||    
T  41972359 aaagaaaaatttggaaaaaatctgaaaattctcacacgcaaatagg 41972314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 225 - 350
Target Start/End: Original strand, 33489688 - 33489815
Alignment:
Q  225 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggc-- 322  Q
    |||||||||| ||||||| |||| | | ||||||||||||| ||||||||||||| | ||||| ||||||||||| |||| ||| |||||||||| ||      
T  33489688 gcgaccccggacggtcgttcgggattgttcgataatttttgtacattagactcaaactaaaagcccattaacacacttactaaaagaaaaatttgagcaa 33489787  T
Q  323 aatttgaaaattgtcacacgtaaatagg 350  Q
    ||| |||||||| ||||||| |||||||    
T  33489788 aatctgaaaattctcacacgcaaatagg 33489815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 308
Target Start/End: Complemental strand, 35951497 - 35951428
Alignment:
Q  239 tcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaa 308  Q
    ||||||||||||||||||||||||||| |||||||    ||||||| || ||||||||||| | ||||||    
T  35951497 tcgtccgggctcgatcgataatttttgtacattaggtcgaacccaatagcccattaacacactaacaaaa 35951428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 293
Target Start/End: Complemental strand, 48901253 - 48901203
Alignment:
Q  243 ccgggctcgatcgataatttttgcacattagactcaacccaaaagtccatt 293  Q
    ||||| |||||||||||||| |||||||||| | ||||||||||| |||||    
T  48901253 ccggggtcgatcgataatttatgcacattaggcccaacccaaaagcccatt 48901203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2142 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold2142
Description:

Target: scaffold2142; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 204 - 380
Target Start/End: Original strand, 502 - 678
Alignment:
Q  204 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacattta 303  Q
    |||||||||||| ||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  502 catgggcggttccaccgtgtagcgatcccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattta 601  T
Q  304 caaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
     |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  602 taaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgac 678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 126; Significance: 7e-65; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 203 - 380
Target Start/End: Original strand, 39914494 - 39914670
Alignment:
Q  203 tcatgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacattt 302  Q
    |||||| |||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||    
T  39914494 tcatggacggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattt 39914593  T
Q  303 acaaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    | ||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  39914594 ataaaa-aaaaaatttgggcaatttgaaaattgtcacaagtaaataggtcttggaattttatttggcacactattgac 39914670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 208 - 380
Target Start/End: Original strand, 15838270 - 15838441
Alignment:
Q  208 ggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaa 307  Q
    |||||||||||||| | ||||||||||||||||  ||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  15838270 ggcggttctaccgtatggcgaccccgggcggtcacccgggctcgattgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaa 15838369  T
Q  308 acgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    | |||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  15838370 a-gaaaaatttgggcaatctgaaaattttcacacgcaaataggtcttggaattttatttagcacactattgac 15838441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 207 - 380
Target Start/End: Complemental strand, 29728570 - 29728397
Alignment:
Q  207 gggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaa 306  Q
    ||||||||||||||| | |||||||||| |||||| ||| ||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||    
T  29728570 gggcggttctaccgtatggcgaccccggacggtcgcccgtgctcgatcgataaattttgcacattagactcaacccaaaagctcattaacacatttacaa 29728471  T
Q  307 aacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    || |||||||||||||||| |||||||||| ||||| ||||||||||| |||||||||||||||||||||||||    
T  29728470 aaagaaaaatttgggcaatctgaaaattgtgacacgcaaataggtcttcgaattttatttagcacactattgac 29728397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 207 - 380
Target Start/End: Complemental strand, 3648978 - 3648805
Alignment:
Q  207 gggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaa 306  Q
    ||||||||||||||| | |||| || || | |||| |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  3648978 gggcggttctaccgtatggcgatccgggacagtcgcccgggctcgatcgataattttttcacattagactcaacccaaaagcccattaacacatttacaa 3648879  T
Q  307 aacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    || ||||| |||||||||| |||||||||||||||| || ||||| ||||||||||||||||||||||||||||    
T  3648878 aaagaaaattttgggcaatctgaaaattgtcacacgcaagtaggttttggaattttatttagcacactattgac 3648805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 228 - 380
Target Start/End: Complemental strand, 16788188 - 16788036
Alignment:
Q  228 accccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaattt 327  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||| |||||||||||||||| |    
T  16788188 accccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatct 16788089  T
Q  328 gaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
     |||| | ||||||| |||||||||||||||||||||||||||||||||||||    
T  16788088 taaaactctcacacgcaaataggtcttggaattttatttagcacactattgac 16788036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 204 - 379
Target Start/End: Complemental strand, 34137012 - 34136837
Alignment:
Q  204 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacattta 303  Q
    |||||| ||||  ||||| | ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||    
T  34137012 catgggtggtttcaccgtctggcgaccccgagcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagtcaattaacacactta 34136913  T
Q  304 caaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattga 379  Q
    ||||| |||||||||||||||| |||||||| ||||||| |||||||||| | ||||||||||||||||| |||||    
T  34136912 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcgaaattttatttagcacacaattga 34136837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 225 - 379
Target Start/End: Original strand, 4404009 - 4404163
Alignment:
Q  225 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaa 324  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||| | |||||||| |||||||||||||||    
T  4404009 gcgaccccaggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaa 4404108  T
Q  325 tttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattga 379  Q
    | | |||||| ||||||| |||||||||| ||||||||||||||||||| |||||    
T  4404109 tctaaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 4404163  T

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Target: chr8; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 225 - 380
Target Start/End: Original strand, 23402109 - 23402264
Alignment:
Q  225 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaa 324  Q
    ||||||||||||||||| |||||||||||||||||| |||||| ||||||| ||||||||||| | ||||||||| |||||||| |||||||||||||||    
T  23402109 gcgaccccgggcggtcgcccgggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaa 23402208  T
Q  325 tttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    | |||||||| ||||||| |||||||||| | ||||||||||| ||||||||||||    
T  23402209 tctgaaaattctcacacgcaaataggtctcgaaattttatttaacacactattgac 23402264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 225 - 378
Target Start/End: Original strand, 36408552 - 36408705
Alignment:
Q  225 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaa 324  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||| ||| |||||    
T  36408552 gcgacctcgggcggtcgcccgggctcgatcgataatttttgcacattagatccaacccaaaagtccattaacacatttacaaaaagaaaatttttggcaa 36408651  T
Q  325 tttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattg 378  Q
    |||||||||| | |||||  |||||||||  |||||||||||| ||||||||||    
T  36408652 tttgaaaattcttacacgctaataggtctcagaattttatttaacacactattg 36408705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 246 - 378
Target Start/End: Original strand, 9877242 - 9877374
Alignment:
Q  246 ggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaatttgaaaattgtcacacgtaa 345  Q
    |||||||| |||||||||||||||||||||  |||||||||||| ||||||||| |||||||| |||||||||||||||| |||||||| ||||| | ||    
T  9877242 ggctcgattgataatttttgcacattagacctaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacatgcaa 9877341  T
Q  346 ataggtcttggaattttatttagcacactattg 378  Q
    |||||||| | ||||||||||||||||||||||    
T  9877342 ataggtctcgaaattttatttagcacactattg 9877374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 225 - 379
Target Start/End: Complemental strand, 2729362 - 2729208
Alignment:
Q  225 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaa 324  Q
    |||||||||||||| || |||||||||||||||||||||| ||||||| |  ||| ||||||| ||||||||||| ||| |||| ||||  ||| |||||    
T  2729362 gcgaccccgggcggacgcccgggctcgatcgataatttttacacattaaatccaatccaaaagcccattaacacacttataaaaagaaattttttggcaa 2729263  T
Q  325 tttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattga 379  Q
    |||||||| | ||| ||| ||||||||||   |||||||||||||||||||||||    
T  2729262 tttgaaaactctcatacgcaaataggtctcaaaattttatttagcacactattga 2729208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 256 - 380
Target Start/End: Original strand, 42230971 - 42231093
Alignment:
Q  256 ataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttg 355  Q
    ||||||||||||||||| |  |||| |||||||||||||||||  |||||||| ||||||||||||||||||||||||| ||| | | ||||||||||      
T  42230971 ataatttttgcacattaaatccaactcaaaagtccattaacac--ttacaaaaagaaaaatttgggcaatttgaaaattctcatatgcaaataggtctca 42231068  T
Q  356 gaattttatttagcacactattgac 380  Q
    |||||||||||||||||||||||||    
T  42231069 gaattttatttagcacactattgac 42231093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 243 - 350
Target Start/End: Original strand, 3435288 - 3435397
Alignment:
Q  243 ccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggc--aatttgaaaattgtcaca 340  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||  ||||||||||| |||||||| |||||||||||||  ||| |||||||| ||| |    
T  3435288 ccgggcttgatcgataatttttgcacattagacccaacccaaaaacccattaacacacttacaaaaagaaaaatttgggcaaaatctgaaaattctcaaa 3435387  T
Q  341 cgtaaatagg 350  Q
    || |||||||    
T  3435388 cgcaaatagg 3435397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 247 - 317
Target Start/End: Complemental strand, 40470637 - 40470567
Alignment:
Q  247 gctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatt 317  Q
    ||||||||||||||||||||||||||||| |||  |||||||||||||||||| ||| ||||  |||||||    
T  40470637 gctcgatcgataatttttgcacattagacccaaatcaaaagtccattaacacacttataaaaaaaaaaatt 40470567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 308
Target Start/End: Complemental strand, 10397206 - 10397123
Alignment:
Q  225 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaa 308  Q
    ||||| ||||||  ||| |||||||| ||||||||||| | ||||||||  |||||||||||| | ||||||||| ||| ||||    
T  10397206 gcgactccgggcactcgcccgggctcaatcgataatttcttcacattaggttcaacccaaaagccgattaacacagttaaaaaa 10397123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 240 - 380
Target Start/End: Original strand, 52941 - 53081
Alignment:
Q  240 cgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaatttgaaaattgtcac 339  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||| | |||||||||||||||||| ||||||||||| |||| |||||||| ||||    
T  52941 cgtccgggctcgatcgataatttttgcacattagatttaacccaaaagccaattaacacatttacaaaaagaaaaatttggacaatctgaaaattctcac 53040  T
Q  340 acgtaaataggtcttggaattttatttagcacactattgac 380  Q
    | | |||||||||| ||||||||||||||||||||||||||    
T  53041 atgcaaataggtctcggaattttatttagcacactattgac 53081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 96; Significance: 5e-47; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 225 - 380
Target Start/End: Original strand, 5231 - 5386
Alignment:
Q  225 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaa 324  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||| ||| | ||||| | ||||||||| |||||||| ||||| |||||||||    
T  5231 gcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattagacccaatctaaaagccaattaacacacttacaaaaagaaaattttgggcaa 5330  T
Q  325 tttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    | |||||||| ||||| | |||||||||| ||||||||||||||||||||||||||    
T  5331 tctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgac 5386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 225 - 380
Target Start/End: Original strand, 31481 - 31636
Alignment:
Q  225 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagtccattaacacatttacaaaacgaaaaatttgggcaa 324  Q
    |||||||| | |||||| ||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||| |||||||| ||||||||||| |||    
T  31481 gcgaccccagacggtcgcccgggctcgatcgataatttttgcacactagacccaacccaaaagcccattaacacacttacaaaaagaaaaatttggacaa 31580  T
Q  325 tttgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 380  Q
    | |||||||| |||| || |||||||||| | |||||||||| |||||||||||||    
T  31581 tctgaaaattctcactcgcaaataggtctagtaattttattttgcacactattgac 31636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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