View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5706_low_32 (Length: 332)

Name: NF5706_low_32
Description: NF5706
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5706_low_32
NF5706_low_32
[»] chr7 (83 HSPs)
chr7 (40-200)||(43277485-43277645)
chr7 (40-200)||(3287148-3287308)
chr7 (28-189)||(18875596-18875757)
chr7 (28-139)||(46386808-46386919)
chr7 (28-139)||(20585576-20585687)
chr7 (29-139)||(37785086-37785196)
chr7 (31-135)||(44374169-44374273)
chr7 (31-135)||(44383034-44383138)
chr7 (28-139)||(12465981-12466092)
chr7 (51-139)||(11066711-11066799)
chr7 (28-139)||(19282312-19282423)
chr7 (51-139)||(12127885-12127973)
chr7 (58-139)||(32434311-32434392)
chr7 (51-139)||(13148193-13148281)
chr7 (66-200)||(14161601-14161728)
chr7 (51-161)||(12371521-12371631)
chr7 (55-164)||(15281505-15281612)
chr7 (59-162)||(11053876-11053979)
chr7 (273-332)||(18875455-18875514)
chr7 (273-332)||(12371659-12371718)
chr7 (273-332)||(13148081-13148140)
chr7 (273-332)||(13745809-13745868)
chr7 (273-332)||(44374330-44374389)
chr7 (273-332)||(44383195-44383254)
chr7 (22-167)||(3289520-3289663)
chr7 (273-332)||(3287381-3287440)
chr7 (273-332)||(11066852-11066911)
chr7 (273-332)||(12127773-12127832)
chr7 (273-332)||(12465869-12465928)
chr7 (277-332)||(25941826-25941881)
chr7 (273-332)||(46386696-46386755)
chr7 (273-331)||(13745386-13745444)
chr7 (276-332)||(24270590-24270646)
chr7 (273-332)||(14161463-14161522)
chr7 (273-332)||(15720160-15720219)
chr7 (273-332)||(19282476-19282535)
chr7 (273-332)||(33001298-33001357)
chr7 (273-332)||(43277353-43277412)
chr7 (276-332)||(4691504-4691560)
chr7 (55-130)||(8757130-8757206)
chr7 (273-329)||(14928944-14929000)
chr7 (273-329)||(15352410-15352466)
chr7 (55-130)||(40555477-40555553)
chr7 (276-332)||(48213553-48213609)
chr7 (273-332)||(14258736-14258795)
chr7 (55-129)||(21735237-21735312)
chr7 (22-157)||(33001171-33001303)
chr7 (22-130)||(832757-832864)
chr7 (22-130)||(1197937-1198044)
chr7 (279-332)||(13894485-13894538)
chr7 (67-130)||(4325310-4325374)
chr7 (55-130)||(13408014-13408090)
chr7 (55-130)||(13865120-13865196)
chr7 (276-328)||(15576443-15576495)
chr7 (273-329)||(16580044-16580100)
chr7 (273-329)||(16585563-16585619)
chr7 (276-332)||(20252950-20253006)
chr7 (292-332)||(39292345-39292385)
chr7 (273-332)||(8851768-8851827)
chr7 (273-332)||(20585740-20585799)
chr7 (273-332)||(20619670-20619729)
chr7 (273-332)||(32301566-32301625)
chr7 (273-327)||(16460546-16460600)
chr7 (292-332)||(21675517-21675557)
chr7 (157-200)||(13134091-13134134)
chr7 (67-128)||(12755442-12755504)
chr7 (55-159)||(15096392-15096495)
chr7 (55-123)||(17071030-17071099)
chr7 (67-130)||(14191823-14191887)
chr7 (273-329)||(20487827-20487883)
chr7 (273-332)||(32434198-32434258)
chr7 (292-332)||(46473490-46473530)
chr7 (284-330)||(48743698-48743744)
chr7 (55-123)||(59161-59230)
chr7 (55-159)||(15139364-15139467)
chr7 (55-159)||(19558032-19558135)
chr7 (273-305)||(1489907-1489939)
chr7 (112-164)||(4071024-4071075)
chr7 (292-332)||(8564199-8564239)
chr7 (113-156)||(11303182-11303226)
chr7 (67-114)||(11309537-11309585)
chr7 (112-156)||(16108882-16108925)
chr7 (292-332)||(21538797-21538836)
[»] chr4 (59 HSPs)
chr4 (28-189)||(19435448-19435609)
chr4 (28-180)||(37018818-37018970)
chr4 (28-135)||(16997747-16997854)
chr4 (26-139)||(42875017-42875130)
chr4 (24-139)||(14548842-14548957)
chr4 (29-139)||(25090874-25090984)
chr4 (51-138)||(19609567-19609654)
chr4 (31-139)||(10357157-10357265)
chr4 (28-139)||(11425174-11425286)
chr4 (28-117)||(33243998-33244087)
chr4 (55-167)||(4615764-4615876)
chr4 (273-332)||(19435307-19435366)
chr4 (23-159)||(3485129-3485262)
chr4 (273-332)||(11425339-11425398)
chr4 (273-332)||(16997914-16997973)
chr4 (273-332)||(53631082-53631141)
chr4 (55-167)||(27027977-27028089)
chr4 (276-332)||(26922280-26922336)
chr4 (273-332)||(10357045-10357104)
chr4 (273-332)||(14549010-14549069)
chr4 (273-328)||(14630210-14630265)
chr4 (273-332)||(15344261-15344320)
chr4 (273-332)||(37019053-37019112)
chr4 (22-167)||(2584909-2585052)
chr4 (29-161)||(21061743-21061874)
chr4 (273-330)||(42875183-42875240)
chr4 (276-332)||(35660233-35660289)
chr4 (273-332)||(13036386-13036445)
chr4 (21-167)||(13446662-13446806)
chr4 (277-332)||(14508150-14508205)
chr4 (277-332)||(19566527-19566582)
chr4 (273-332)||(25513127-25513186)
chr4 (277-332)||(26445273-26445328)
chr4 (273-332)||(55582588-55582647)
chr4 (22-167)||(6511785-6511928)
chr4 (274-332)||(25091038-25091096)
chr4 (279-332)||(3337489-3337542)
chr4 (55-167)||(14933139-14933251)
chr4 (276-332)||(45314945-45315001)
chr4 (273-332)||(19609708-19609767)
chr4 (154-200)||(9923437-9923483)
chr4 (55-167)||(14942344-14942457)
chr4 (22-130)||(15448145-15448252)
chr4 (67-167)||(20899458-20899558)
chr4 (277-332)||(2425229-2425284)
chr4 (273-332)||(3485295-3485354)
chr4 (55-129)||(18229899-18229974)
chr4 (273-332)||(33243905-33243964)
chr4 (154-200)||(11479376-11479422)
chr4 (55-123)||(9638247-9638316)
chr4 (23-103)||(19734509-19734589)
chr4 (280-332)||(15114614-15114666)
chr4 (276-324)||(16026544-16026592)
chr4 (157-200)||(14629251-14629294)
chr4 (157-200)||(35659973-35660016)
chr4 (114-156)||(49547946-49547987)
chr4 (55-123)||(9871309-9871378)
chr4 (55-123)||(51992763-51992832)
chr4 (113-156)||(15534116-15534160)
[»] chr8 (59 HSPs)
chr8 (28-200)||(22259031-22259201)
chr8 (51-139)||(19140008-19140096)
chr8 (31-135)||(20179246-20179350)
chr8 (51-139)||(39936731-39936819)
chr8 (22-164)||(17907670-17907811)
chr8 (29-139)||(42818628-42818738)
chr8 (22-164)||(17217798-17217938)
chr8 (273-332)||(5760917-5760976)
chr8 (273-332)||(20179130-20179189)
chr8 (273-332)||(20517726-20517785)
chr8 (273-332)||(22344426-22344485)
chr8 (273-332)||(22356086-22356145)
chr8 (66-164)||(23888977-23889075)
chr8 (273-332)||(36305043-36305102)
chr8 (273-332)||(39936619-39936678)
chr8 (276-332)||(4381401-4381457)
chr8 (273-329)||(19140149-19140205)
chr8 (276-332)||(22474139-22474195)
chr8 (273-332)||(6102362-6102420)
chr8 (273-332)||(22483131-22483190)
chr8 (55-164)||(23947442-23947549)
chr8 (55-163)||(22584437-22584545)
chr8 (24-97)||(24713384-24713457)
chr8 (276-332)||(18817070-18817126)
chr8 (273-332)||(20084247-20084305)
chr8 (55-164)||(22244645-22244753)
chr8 (277-329)||(17979028-17979080)
chr8 (276-332)||(18815431-18815487)
chr8 (276-328)||(36733126-36733178)
chr8 (279-332)||(361821-361874)
chr8 (276-329)||(5080396-5080449)
chr8 (23-139)||(20084358-20084470)
chr8 (273-329)||(21346011-21346067)
chr8 (273-332)||(18833855-18833914)
chr8 (283-332)||(17437927-17437976)
chr8 (279-332)||(32949991-32950044)
chr8 (67-130)||(15635914-15635978)
chr8 (292-332)||(19332183-19332223)
chr8 (55-130)||(20454481-20454557)
chr8 (292-332)||(45559777-45559817)
chr8 (273-332)||(5082821-5082880)
chr8 (157-200)||(12800500-12800543)
chr8 (292-331)||(18118774-18118813)
chr8 (55-121)||(20455238-20455305)
chr8 (55-121)||(20460216-20460283)
chr8 (277-332)||(21513709-21513764)
chr8 (157-200)||(31724302-31724345)
chr8 (273-332)||(42818516-42818575)
chr8 (153-200)||(23669745-23669794)
chr8 (55-159)||(22318662-22318765)
chr8 (55-123)||(39695271-39695340)
chr8 (292-332)||(18122348-18122388)
chr8 (55-114)||(19882207-19882267)
chr8 (292-328)||(22313234-22313270)
chr8 (273-329)||(23914308-23914364)
chr8 (292-332)||(25295536-25295576)
chr8 (292-332)||(25757556-25757596)
chr8 (74-149)||(6102463-6102536)
chr8 (55-123)||(25849189-25849258)
[»] chr3 (102 HSPs)
chr3 (47-193)||(50348773-50348919)
chr3 (40-180)||(14153150-14153290)
chr3 (28-139)||(5206375-5206486)
chr3 (24-139)||(16728499-16728614)
chr3 (28-139)||(41173092-41173203)
chr3 (28-139)||(35065301-35065412)
chr3 (31-139)||(17693291-17693399)
chr3 (24-139)||(35353815-35353930)
chr3 (40-139)||(44273706-44273805)
chr3 (31-161)||(14508074-14508204)
chr3 (29-139)||(15932228-15932338)
chr3 (47-139)||(11258706-11258798)
chr3 (23-139)||(45531342-45531458)
chr3 (24-139)||(19884244-19884359)
chr3 (51-139)||(22307304-22307392)
chr3 (51-139)||(40807239-40807327)
chr3 (28-139)||(17519594-17519705)
chr3 (28-139)||(17534456-17534567)
chr3 (47-139)||(2842183-2842275)
chr3 (51-139)||(17538350-17538438)
chr3 (273-332)||(6156090-6156149)
chr3 (273-332)||(14153008-14153067)
chr3 (273-332)||(24546221-24546280)
chr3 (273-332)||(50755990-50756049)
chr3 (28-102)||(5215085-5215159)
chr3 (273-332)||(2842071-2842130)
chr3 (273-332)||(9511774-9511833)
chr3 (273-332)||(9519749-9519808)
chr3 (273-332)||(14508232-14508291)
chr3 (273-332)||(17046546-17046605)
chr3 (273-332)||(17207726-17207785)
chr3 (273-332)||(17538491-17538550)
chr3 (273-332)||(17693452-17693511)
chr3 (22-164)||(20417289-20417429)
chr3 (273-332)||(35065189-35065248)
chr3 (273-332)||(40807380-40807439)
chr3 (273-332)||(44273858-44273917)
chr3 (273-332)||(50348635-50348694)
chr3 (273-332)||(54876092-54876151)
chr3 (273-332)||(11192465-11192524)
chr3 (273-332)||(13519667-13519725)
chr3 (273-332)||(15565898-15565957)
chr3 (273-332)||(17519482-17519541)
chr3 (273-332)||(17534344-17534403)
chr3 (273-332)||(22307192-22307251)
chr3 (273-332)||(35353983-35354042)
chr3 (273-332)||(41172980-41173039)
chr3 (71-164)||(13179399-13179492)
chr3 (55-167)||(10550510-10550622)
chr3 (67-167)||(14818278-14818378)
chr3 (71-164)||(16059489-16059580)
chr3 (55-130)||(3394736-3394812)
chr3 (28-123)||(10562923-10563019)
chr3 (276-332)||(54330914-54330970)
chr3 (273-332)||(5206263-5206322)
chr3 (273-332)||(11258851-11258910)
chr3 (273-332)||(15932116-15932175)
chr3 (273-332)||(17685452-17685511)
chr3 (283-332)||(14441562-14441611)
chr3 (71-164)||(16044629-16044720)
chr3 (273-329)||(10542070-10542126)
chr3 (55-130)||(13523145-13523221)
chr3 (273-332)||(19568977-19569037)
chr3 (68-139)||(23395786-23395857)
chr3 (276-332)||(50351609-50351665)
chr3 (277-332)||(14568668-14568723)
chr3 (273-332)||(18700082-18700141)
chr3 (273-332)||(42353283-42353341)
chr3 (273-319)||(17691427-17691473)
chr3 (22-130)||(13520515-13520622)
chr3 (55-167)||(17548249-17548361)
chr3 (55-167)||(52338663-52338775)
chr3 (71-130)||(6819367-6819427)
chr3 (67-130)||(18367492-18367556)
chr3 (156-200)||(33564372-33564416)
chr3 (273-332)||(12470186-12470245)
chr3 (273-332)||(12511232-12511291)
chr3 (273-332)||(40812217-40812276)
chr3 (68-159)||(42353374-42353463)
chr3 (273-332)||(43889408-43889467)
chr3 (273-332)||(49900112-49900171)
chr3 (55-123)||(6158637-6158706)
chr3 (55-123)||(14642293-14642362)
chr3 (79-156)||(16050114-16050189)
chr3 (55-130)||(179441-179517)
chr3 (273-329)||(14671208-14671264)
chr3 (273-329)||(14682707-14682763)
chr3 (70-167)||(52213175-52213272)
chr3 (295-332)||(12952448-12952485)
chr3 (55-123)||(14250861-14250927)
chr3 (159-200)||(16180481-16180522)
chr3 (55-123)||(37038058-37038127)
chr3 (55-123)||(42324964-42325033)
chr3 (279-332)||(43928741-43928794)
chr3 (292-332)||(25104810-25104850)
chr3 (157-200)||(11191416-11191459)
chr3 (157-200)||(11561995-11562038)
chr3 (158-200)||(14519583-14519625)
chr3 (114-156)||(54520771-54520812)
chr3 (72-117)||(13519549-13519593)
chr3 (292-332)||(17937931-17937971)
chr3 (292-332)||(18739300-18739340)
[»] chr1 (61 HSPs)
chr1 (28-157)||(19675971-19676100)
chr1 (31-139)||(42912273-42912381)
chr1 (40-139)||(16059035-16059134)
chr1 (28-139)||(4596566-4596677)
chr1 (28-139)||(20587898-20588009)
chr1 (28-139)||(20592436-20592547)
chr1 (29-139)||(21046770-21046880)
chr1 (28-139)||(20634356-20634467)
chr1 (54-180)||(1642681-1642805)
chr1 (51-139)||(41227425-41227513)
chr1 (22-164)||(42696931-42697070)
chr1 (55-167)||(18275157-18275269)
chr1 (55-167)||(52983387-52983499)
chr1 (273-332)||(4596454-4596513)
chr1 (273-332)||(20588063-20588122)
chr1 (273-332)||(20592601-20592660)
chr1 (273-332)||(20634244-20634303)
chr1 (273-332)||(39060480-39060539)
chr1 (55-164)||(51476218-51476327)
chr1 (276-332)||(41226060-41226116)
chr1 (276-332)||(41227313-41227369)
chr1 (276-332)||(50544239-50544295)
chr1 (273-332)||(1642980-1643039)
chr1 (273-332)||(7052665-7052723)
chr1 (273-332)||(22824015-22824074)
chr1 (279-332)||(12710278-12710331)
chr1 (23-159)||(14238313-14238446)
chr1 (273-332)||(16058923-16058982)
chr1 (277-332)||(18120993-18121048)
chr1 (273-332)||(19676095-19676154)
chr1 (273-332)||(38887697-38887755)
chr1 (273-332)||(45496329-45496388)
chr1 (273-332)||(51082600-51082659)
chr1 (273-332)||(51323659-51323718)
chr1 (273-325)||(21239911-21239963)
chr1 (273-332)||(14238221-14238280)
chr1 (277-332)||(24720302-24720357)
chr1 (273-332)||(42912434-42912493)
chr1 (70-167)||(18270518-18270615)
chr1 (274-328)||(21046662-21046716)
chr1 (58-159)||(7052756-7052855)
chr1 (55-167)||(13528492-13528604)
chr1 (58-139)||(38887848-38887927)
chr1 (276-332)||(6833602-6833658)
chr1 (55-130)||(7792586-7792662)
chr1 (273-325)||(11809199-11809251)
chr1 (67-130)||(44822855-44822919)
chr1 (281-332)||(28477377-28477428)
chr1 (273-332)||(48301316-48301375)
chr1 (67-167)||(18823860-18823960)
chr1 (55-123)||(38057394-38057463)
chr1 (55-122)||(21181067-21181135)
chr1 (273-325)||(23073270-23073322)
chr1 (67-130)||(24815586-24815647)
chr1 (71-159)||(13302045-13302132)
chr1 (55-123)||(19761968-19762037)
chr1 (55-114)||(10813273-10813333)
chr1 (158-200)||(17903779-17903821)
chr1 (55-123)||(8276733-8276802)
chr1 (86-159)||(51082496-51082567)
chr1 (172-200)||(14793947-14793975)
[»] chr6 (51 HSPs)
chr6 (28-136)||(17318846-17318954)
chr6 (28-139)||(15891424-15891535)
chr6 (28-139)||(27126198-27126309)
chr6 (28-139)||(31733928-31734039)
chr6 (51-139)||(23150987-23151075)
chr6 (51-139)||(18708743-18708830)
chr6 (56-164)||(31735624-31735732)
chr6 (22-139)||(24441136-24441251)
chr6 (70-139)||(7827234-7827303)
chr6 (273-332)||(7827356-7827415)
chr6 (273-332)||(17318731-17318790)
chr6 (273-332)||(23150875-23150934)
chr6 (274-332)||(13285094-13285152)
chr6 (70-162)||(22212211-22212303)
chr6 (273-332)||(19655838-19655897)
chr6 (273-332)||(22556633-22556692)
chr6 (273-332)||(27126086-27126145)
chr6 (51-106)||(27322172-27322227)
chr6 (22-167)||(13751052-13751195)
chr6 (274-332)||(32259233-32259291)
chr6 (276-329)||(19234584-19234637)
chr6 (275-332)||(31734094-31734151)
chr6 (55-130)||(18658448-18658524)
chr6 (276-332)||(25921117-25921173)
chr6 (273-332)||(18702948-18703007)
chr6 (273-332)||(18708883-18708942)
chr6 (273-332)||(23491780-23491839)
chr6 (273-332)||(23497378-23497437)
chr6 (273-332)||(27318164-27318223)
chr6 (273-332)||(28947728-28947787)
chr6 (277-332)||(29044650-29044705)
chr6 (276-329)||(18585007-18585060)
chr6 (55-167)||(19443980-19444092)
chr6 (55-130)||(610982-611058)
chr6 (55-130)||(29848239-29848315)
chr6 (55-167)||(16133370-16133482)
chr6 (273-332)||(15705220-15705279)
chr6 (277-332)||(18455680-18455734)
chr6 (273-332)||(19773318-19773377)
chr6 (277-319)||(15891327-15891369)
chr6 (55-130)||(13764592-13764668)
chr6 (154-200)||(18927964-18928010)
chr6 (153-200)||(20411462-20411511)
chr6 (273-327)||(22806217-22806271)
chr6 (101-139)||(27318276-27318314)
chr6 (295-332)||(18398325-18398362)
chr6 (55-123)||(19829695-19829764)
chr6 (28-75)||(7825866-7825913)
chr6 (22-167)||(24266976-24267119)
chr6 (168-200)||(18458574-18458606)
chr6 (292-332)||(22523577-22523617)
[»] chr2 (52 HSPs)
chr2 (28-161)||(36839394-36839527)
chr2 (24-139)||(27485191-27485306)
chr2 (28-139)||(28653223-28653334)
chr2 (28-139)||(9975148-9975259)
chr2 (47-139)||(23969344-23969436)
chr2 (28-139)||(17306707-17306818)
chr2 (28-139)||(24515406-24515517)
chr2 (29-139)||(19358152-19358262)
chr2 (51-139)||(24781561-24781649)
chr2 (68-139)||(5031851-5031922)
chr2 (63-164)||(5985336-5985435)
chr2 (58-163)||(14693456-14693561)
chr2 (273-332)||(9975313-9975372)
chr2 (273-332)||(22686224-22686283)
chr2 (273-332)||(36839555-36839614)
chr2 (273-326)||(25587301-25587354)
chr2 (273-332)||(5031739-5031798)
chr2 (273-332)||(24781449-24781508)
chr2 (273-332)||(43707893-43707952)
chr2 (23-164)||(10897487-10897628)
chr2 (71-158)||(27851836-27851922)
chr2 (273-332)||(23969232-23969291)
chr2 (273-332)||(24515570-24515629)
chr2 (276-330)||(1384296-1384350)
chr2 (273-326)||(17306871-17306924)
chr2 (273-329)||(28345687-28345743)
chr2 (273-332)||(19201810-19201869)
chr2 (277-332)||(21316270-21316325)
chr2 (277-332)||(21336061-21336116)
chr2 (273-332)||(23069059-23069118)
chr2 (277-332)||(23609865-23609920)
chr2 (273-332)||(27485079-27485138)
chr2 (273-332)||(28653111-28653170)
chr2 (71-164)||(27860542-27860634)
chr2 (55-164)||(44071733-44071841)
chr2 (279-328)||(24273872-24273921)
chr2 (67-130)||(31520371-31520435)
chr2 (71-157)||(18391038-18391124)
chr2 (273-332)||(21368491-21368550)
chr2 (55-130)||(6478034-6478110)
chr2 (292-332)||(22332121-22332161)
chr2 (148-200)||(20915375-20915429)
chr2 (273-329)||(9784966-9785022)
chr2 (292-332)||(24841356-24841396)
chr2 (157-200)||(25140214-25140257)
chr2 (153-200)||(22689956-22690005)
chr2 (153-200)||(22694552-22694601)
chr2 (55-159)||(3538981-3539084)
chr2 (55-123)||(18389040-18389109)
chr2 (291-332)||(29113764-29113805)
chr2 (160-200)||(10744423-10744463)
chr2 (113-156)||(20261154-20261198)
[»] scaffold0737 (2 HSPs)
scaffold0737 (28-139)||(5434-5545)
scaffold0737 (273-332)||(5322-5381)
[»] scaffold0064 (2 HSPs)
scaffold0064 (29-139)||(57969-58079)
scaffold0064 (273-332)||(58132-58191)
[»] scaffold1662 (2 HSPs)
scaffold1662 (28-139)||(142-253)
scaffold1662 (273-332)||(30-89)
[»] scaffold1817 (2 HSPs)
scaffold1817 (29-139)||(118-228)
scaffold1817 (275-328)||(10-63)
[»] scaffold0111 (4 HSPs)
scaffold0111 (28-139)||(13255-13366)
scaffold0111 (28-139)||(19522-19633)
scaffold0111 (273-332)||(13145-13204)
scaffold0111 (273-332)||(19412-19471)
[»] scaffold0042 (2 HSPs)
scaffold0042 (29-139)||(47290-47399)
scaffold0042 (66-164)||(28532-28628)
[»] scaffold0509 (2 HSPs)
scaffold0509 (51-161)||(9457-9567)
scaffold0509 (273-305)||(9397-9429)
[»] scaffold0134 (2 HSPs)
scaffold0134 (51-139)||(9947-10035)
scaffold0134 (273-332)||(9835-9894)
[»] chr5 (29 HSPs)
chr5 (28-139)||(19920854-19920965)
chr5 (54-180)||(23200244-23200368)
chr5 (273-332)||(30611937-30611996)
chr5 (277-332)||(16605212-16605267)
chr5 (273-332)||(19921018-19921077)
chr5 (273-332)||(20198197-20198256)
chr5 (273-332)||(23199998-23200057)
chr5 (273-332)||(30613897-30613956)
chr5 (276-332)||(22110987-22111043)
chr5 (55-130)||(24277340-24277416)
chr5 (55-130)||(24384797-24384873)
chr5 (277-332)||(18744038-18744093)
chr5 (273-332)||(20565938-20565997)
chr5 (273-332)||(32607934-32607992)
chr5 (273-332)||(36509386-36509444)
chr5 (29-123)||(25250632-25250725)
chr5 (29-123)||(25314417-25314510)
chr5 (280-332)||(1627989-1628041)
chr5 (22-167)||(8952750-8952891)
chr5 (277-332)||(14026416-14026471)
chr5 (273-332)||(21399612-21399671)
chr5 (273-332)||(33895491-33895550)
chr5 (76-167)||(22357656-22357747)
chr5 (23-118)||(21406431-21406524)
chr5 (106-164)||(20469827-20469884)
chr5 (58-140)||(32608084-32608164)
chr5 (55-130)||(17812638-17812714)
chr5 (55-123)||(10953214-10953283)
chr5 (112-156)||(37805118-37805163)
[»] scaffold0632 (2 HSPs)
scaffold0632 (29-139)||(386-496)
scaffold0632 (273-332)||(549-608)
[»] scaffold0375 (2 HSPs)
scaffold0375 (57-139)||(9024-9106)
scaffold0375 (274-332)||(8912-8970)
[»] scaffold0384 (2 HSPs)
scaffold0384 (51-139)||(8106-8195)
scaffold0384 (273-332)||(7994-8053)
[»] scaffold0181 (1 HSPs)
scaffold0181 (55-167)||(34089-34201)
[»] scaffold0146 (3 HSPs)
scaffold0146 (30-123)||(23618-23711)
scaffold0146 (273-332)||(22442-22501)
scaffold0146 (70-159)||(22322-22409)
[»] scaffold0074 (1 HSPs)
scaffold0074 (54-180)||(773-892)
[»] scaffold0010 (1 HSPs)
scaffold0010 (22-164)||(127119-127258)
[»] scaffold0273 (1 HSPs)
scaffold0273 (55-167)||(6862-6974)
[»] scaffold0032 (1 HSPs)
scaffold0032 (273-330)||(62581-62638)
[»] scaffold1283 (1 HSPs)
scaffold1283 (273-332)||(1076-1135)
[»] scaffold0098 (1 HSPs)
scaffold0098 (273-332)||(39483-39542)
[»] scaffold0061 (2 HSPs)
scaffold0061 (273-332)||(15195-15254)
scaffold0061 (273-332)||(24253-24312)
[»] scaffold0004 (3 HSPs)
scaffold0004 (273-332)||(66641-66700)
scaffold0004 (55-167)||(59585-59697)
scaffold0004 (106-164)||(109458-109515)
[»] scaffold0369 (1 HSPs)
scaffold0369 (273-327)||(16584-16638)
[»] scaffold0409 (2 HSPs)
scaffold0409 (29-164)||(444-578)
scaffold0409 (29-164)||(8699-8833)
[»] scaffold0123 (2 HSPs)
scaffold0123 (276-332)||(16325-16381)
scaffold0123 (55-129)||(2013-2088)
[»] scaffold0077 (2 HSPs)
scaffold0077 (23-159)||(33568-33701)
scaffold0077 (273-315)||(33734-33776)
[»] scaffold1633 (2 HSPs)
scaffold1633 (273-332)||(589-648)
scaffold1633 (23-161)||(426-561)
[»] scaffold1186 (2 HSPs)
scaffold1186 (273-328)||(1095-1150)
scaffold1186 (157-200)||(100-143)
[»] scaffold0414 (1 HSPs)
scaffold0414 (273-332)||(11955-12014)
[»] scaffold0203 (1 HSPs)
scaffold0203 (273-332)||(18735-18794)
[»] scaffold0086 (1 HSPs)
scaffold0086 (273-332)||(36125-36184)
[»] scaffold0005 (2 HSPs)
scaffold0005 (273-328)||(187118-187173)
scaffold0005 (157-200)||(188089-188132)
[»] scaffold2046 (1 HSPs)
scaffold2046 (22-167)||(321-464)
[»] scaffold0453 (1 HSPs)
scaffold0453 (22-167)||(3246-3389)
[»] scaffold0439 (4 HSPs)
scaffold0439 (273-331)||(3803-3861)
scaffold0439 (31-139)||(11386-11491)
scaffold0439 (276-332)||(11547-11602)
scaffold0439 (66-157)||(3718-3808)
[»] scaffold0413 (1 HSPs)
scaffold0413 (22-167)||(10887-11030)
[»] scaffold0379 (1 HSPs)
scaffold0379 (273-331)||(10095-10153)
[»] scaffold0309 (2 HSPs)
scaffold0309 (22-167)||(6117-6260)
scaffold0309 (22-167)||(8269-8412)
[»] scaffold0002 (1 HSPs)
scaffold0002 (71-164)||(127496-127589)
[»] scaffold0529 (1 HSPs)
scaffold0529 (276-332)||(7904-7960)
[»] scaffold0241 (2 HSPs)
scaffold0241 (276-332)||(5104-5160)
scaffold0241 (276-328)||(1951-2003)
[»] scaffold0207 (1 HSPs)
scaffold0207 (23-159)||(15210-15343)
[»] scaffold0108 (2 HSPs)
scaffold0108 (276-332)||(7390-7446)
scaffold0108 (55-123)||(5657-5726)
[»] scaffold0256 (1 HSPs)
scaffold0256 (281-332)||(3130-3181)
[»] scaffold0125 (1 HSPs)
scaffold0125 (273-332)||(27684-27743)
[»] scaffold0104 (2 HSPs)
scaffold0104 (273-332)||(7604-7662)
scaffold0104 (273-332)||(14235-14293)
[»] scaffold0083 (4 HSPs)
scaffold0083 (22-157)||(645-777)
scaffold0083 (22-157)||(5949-6081)
scaffold0083 (273-332)||(591-650)
scaffold0083 (273-332)||(5895-5954)
[»] scaffold0047 (2 HSPs)
scaffold0047 (273-332)||(78449-78507)
scaffold0047 (66-159)||(78322-78413)
[»] scaffold0026 (2 HSPs)
scaffold0026 (273-332)||(146117-146175)
scaffold0026 (23-159)||(145951-146084)
[»] scaffold0019 (1 HSPs)
scaffold0019 (273-332)||(29542-29601)
[»] scaffold0490 (1 HSPs)
scaffold0490 (22-131)||(5035-5143)
[»] scaffold0056 (1 HSPs)
scaffold0056 (55-164)||(66253-66361)
[»] scaffold0021 (1 HSPs)
scaffold0021 (273-331)||(168821-168879)
[»] scaffold0334 (1 HSPs)
scaffold0334 (279-332)||(1475-1528)
[»] scaffold0230 (1 HSPs)
scaffold0230 (276-329)||(7465-7518)
[»] scaffold0188 (1 HSPs)
scaffold0188 (55-167)||(335-447)
[»] scaffold0117 (1 HSPs)
scaffold0117 (67-167)||(40923-41023)
[»] scaffold0039 (1 HSPs)
scaffold0039 (273-330)||(10541-10597)
[»] scaffold0546 (4 HSPs)
scaffold0546 (23-159)||(7193-7326)
scaffold0546 (273-332)||(11179-11238)
scaffold0546 (23-159)||(11013-11146)
scaffold0546 (273-332)||(7359-7418)
[»] scaffold0113 (1 HSPs)
scaffold0113 (276-332)||(34652-34708)
[»] scaffold0109 (4 HSPs)
scaffold0109 (23-159)||(5981-6114)
scaffold0109 (273-332)||(586-645)
scaffold0109 (23-159)||(678-811)
scaffold0109 (273-332)||(5889-5948)
[»] scaffold0070 (1 HSPs)
scaffold0070 (67-130)||(8311-8375)
[»] scaffold1539 (1 HSPs)
scaffold1539 (273-332)||(1291-1350)
[»] scaffold0452 (1 HSPs)
scaffold0452 (273-332)||(13274-13333)
[»] scaffold0292 (1 HSPs)
scaffold0292 (273-332)||(6897-6956)
[»] scaffold0205 (1 HSPs)
scaffold0205 (273-332)||(29996-30055)
[»] scaffold0034 (1 HSPs)
scaffold0034 (273-332)||(120294-120353)
[»] scaffold0020 (1 HSPs)
scaffold0020 (273-332)||(142997-143056)
[»] scaffold0017 (1 HSPs)
scaffold0017 (273-332)||(25900-25959)
[»] scaffold0364 (1 HSPs)
scaffold0364 (279-329)||(7523-7573)
[»] scaffold0180 (1 HSPs)
scaffold0180 (279-329)||(28980-29030)
[»] scaffold0151 (1 HSPs)
scaffold0151 (279-332)||(9445-9498)
[»] scaffold0106 (1 HSPs)
scaffold0106 (279-332)||(21123-21176)
[»] scaffold1815 (1 HSPs)
scaffold1815 (58-118)||(1268-1327)
[»] scaffold0825 (1 HSPs)
scaffold0825 (67-130)||(1549-1613)
[»] scaffold0607 (1 HSPs)
scaffold0607 (67-130)||(2960-3024)
[»] scaffold0429 (1 HSPs)
scaffold0429 (55-130)||(2724-2800)
[»] scaffold0213 (1 HSPs)
scaffold0213 (276-332)||(18552-18608)
[»] scaffold0126 (1 HSPs)
scaffold0126 (67-130)||(6053-6117)
[»] scaffold0018 (1 HSPs)
scaffold0018 (273-329)||(21036-21092)
[»] scaffold0445 (1 HSPs)
scaffold0445 (71-164)||(2633-2727)
[»] scaffold0096 (1 HSPs)
scaffold0096 (273-332)||(21452-21511)
[»] scaffold0335 (1 HSPs)
scaffold0335 (154-200)||(945-991)
[»] scaffold0630 (1 HSPs)
scaffold0630 (55-123)||(8304-8373)
[»] scaffold0149 (1 HSPs)
scaffold0149 (55-123)||(20889-20958)
[»] scaffold0107 (1 HSPs)
scaffold0107 (55-167)||(3120-3232)
[»] scaffold0059 (1 HSPs)
scaffold0059 (276-317)||(49243-49284)
[»] scaffold0011 (2 HSPs)
scaffold0011 (157-198)||(40231-40272)
scaffold0011 (281-332)||(126140-126191)
[»] scaffold0962 (1 HSPs)
scaffold0962 (54-121)||(1272-1340)
[»] scaffold0575 (1 HSPs)
scaffold0575 (273-329)||(5938-5994)
[»] scaffold0065 (1 HSPs)
scaffold0065 (55-123)||(53378-53446)
[»] scaffold0639 (1 HSPs)
scaffold0639 (273-332)||(7198-7257)
[»] scaffold0507 (1 HSPs)
scaffold0507 (273-332)||(2443-2502)
[»] scaffold0261 (1 HSPs)
scaffold0261 (273-332)||(7116-7175)
[»] scaffold0220 (2 HSPs)
scaffold0220 (55-121)||(16004-16071)
scaffold0220 (55-121)||(13186-13253)
[»] scaffold0008 (2 HSPs)
scaffold0008 (66-164)||(136319-136416)
scaffold0008 (55-130)||(12244-12320)
[»] scaffold0003 (1 HSPs)
scaffold0003 (70-164)||(95542-95636)
[»] scaffold0232 (1 HSPs)
scaffold0232 (273-327)||(3654-3708)
[»] scaffold0328 (1 HSPs)
scaffold0328 (55-123)||(19387-19456)
[»] scaffold1223 (1 HSPs)
scaffold1223 (160-200)||(672-712)
[»] scaffold0174 (1 HSPs)
scaffold0174 (292-332)||(20683-20723)
[»] scaffold0054 (1 HSPs)
scaffold0054 (160-200)||(66442-66482)
[»] scaffold0013 (1 HSPs)
scaffold0013 (292-332)||(7955-7995)
[»] scaffold0645 (1 HSPs)
scaffold0645 (157-200)||(657-700)
[»] scaffold0028 (1 HSPs)
scaffold0028 (55-161)||(3793-3898)
[»] scaffold0628 (2 HSPs)
scaffold0628 (158-200)||(4304-4346)
scaffold0628 (158-200)||(8864-8906)
[»] scaffold0371 (1 HSPs)
scaffold0371 (55-164)||(16846-16954)
[»] scaffold0231 (1 HSPs)
scaffold0231 (158-200)||(18523-18565)
[»] scaffold0162 (1 HSPs)
scaffold0162 (153-200)||(24797-24846)
[»] scaffold0177 (1 HSPs)
scaffold0177 (24-77)||(1696-1749)
[»] scaffold1695 (1 HSPs)
scaffold1695 (76-159)||(625-707)
[»] scaffold1278 (1 HSPs)
scaffold1278 (292-328)||(857-893)
[»] scaffold0338 (1 HSPs)
scaffold0338 (55-130)||(3679-3755)
[»] scaffold0178 (1 HSPs)
scaffold0178 (172-200)||(570-598)
[»] scaffold0080 (1 HSPs)
scaffold0080 (300-332)||(22400-22432)


Alignment Details
Target: chr7 (Bit Score: 153; Significance: 5e-81; HSPs: 83)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 40 - 200
Target Start/End: Complemental strand, 43277645 - 43277485
Alignment:
Q  40 catacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 139  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43277645 catacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 43277546  T
Q  140 tttcacattaaccaacaacattaattattaataacatcatataacatcatagttatcaaca 200  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  43277545 tttcacattaaccaacaacattaatcattaataacatcatataacatcatagttatcaaca 43277485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 40 - 200
Target Start/End: Original strand, 3287148 - 3287308
Alignment:
Q  40 catacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 139  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3287148 catacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 3287247  T
Q  140 tttcacattaaccaacaacattaattattaataacatcatataacatcatagttatcaaca 200  Q
    ||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  3287248 tttcacattaagcaacaacattaatcattaataacatcatataaaatcatagttatcaaca 3287308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 28 - 189
Target Start/End: Complemental strand, 18875757 - 18875596
Alignment:
Q  28 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 127  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  18875757 cagagacaacaacatacaacaacttcacaacatagcatcattaataataacaacttgaattgtataacaacattattttctatatcataccttttccaca 18875658  T
Q  128 taaatatatgtatttcacattaaccaacaacattaattattaataacatcatataacatcat 189  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18875657 taaatatatgtatttcacattaaccaacaacattaatcattaataacatcatataacatcat 18875596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 28 - 139
Target Start/End: Complemental strand, 46386919 - 46386808
Alignment:
Q  28 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 127  Q
    |||||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46386919 cagagacagcaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 46386820  T
Q  128 taaatatatgta 139  Q
    ||||||||||||    
T  46386819 taaatatatgta 46386808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 28 - 139
Target Start/End: Original strand, 20585576 - 20585687
Alignment:
Q  28 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 127  Q
    ||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  20585576 cagagacaacaacatacaacaacttcacgacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcataccttttccaca 20585675  T
Q  128 taaatatatgta 139  Q
    ||||||||||||    
T  20585676 taaatatatgta 20585687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 29 - 139
Target Start/End: Complemental strand, 37785196 - 37785086
Alignment:
Q  29 agagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacat 128  Q
    ||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  37785196 agagacagcaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcataccttttccacat 37785097  T
Q  129 aaatatatgta 139  Q
    |||||||||||    
T  37785096 aaatatatgta 37785086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 31 - 135
Target Start/End: Original strand, 44374169 - 44374273
Alignment:
Q  31 agacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataa 130  Q
    |||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  44374169 agacaacaacatacaacaacttcacaacataacatcattaataataacaacttgaatggtataacaacattattttctatatcataccttttccacataa 44374268  T
Q  131 atata 135  Q
    |||||    
T  44374269 atata 44374273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 31 - 135
Target Start/End: Original strand, 44383034 - 44383138
Alignment:
Q  31 agacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataa 130  Q
    |||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  44383034 agacaacaacatacaacaacttcacaacataacatcattaataataacaacttgaatggtataacaacattattttctatatcataccttttccacataa 44383133  T
Q  131 atata 135  Q
    |||||    
T  44383134 atata 44383138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 28 - 139
Target Start/End: Complemental strand, 12466092 - 12465981
Alignment:
Q  28 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 127  Q
    |||||||| || |||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  12466092 cagagacagcaacatacaacaacttaacaacataacatcattaataataacaacttgaatggtataacaacattatttactatatcatacattttccaca 12465993  T
Q  128 taaatatatgta 139  Q
    ||||||||||||    
T  12465992 taaatatatgta 12465981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 51 - 139
Target Start/End: Original strand, 11066711 - 11066799
Alignment:
Q  51 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 139  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11066711 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttccatatcatacattttccacataaatatatgta 11066799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 28 - 139
Target Start/End: Original strand, 19282312 - 19282423
Alignment:
Q  28 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 127  Q
    ||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||| |    
T  19282312 cagagacaacaacatacaacaacttcacaacatagcatcgttaataataacaacttgaatggtataacaacattattttctatattatatcttttccata 19282411  T
Q  128 taaatatatgta 139  Q
    ||||||||||||    
T  19282412 taaatatatgta 19282423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 51 - 139
Target Start/End: Complemental strand, 12127973 - 12127885
Alignment:
Q  51 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 139  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  12127973 ttcacaacatagtatcattaataataacaacttgaatgatataacaacattattttctatatcataccttttccacataaatatatgta 12127885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 58 - 139
Target Start/End: Complemental strand, 32434392 - 32434311
Alignment:
Q  58 catagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 139  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32434392 cataacatcattaataacaacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 32434311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 51 - 139
Target Start/End: Complemental strand, 13148281 - 13148193
Alignment:
Q  51 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 139  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||| ||||||||||||||    
T  13148281 ttcacaacatagcatcattaataataacaacttgaatggtataaaaatattattttctatatcataccttttccgcataaatatatgta 13148193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 66 - 200
Target Start/End: Complemental strand, 14161728 - 14161601
Alignment:
Q  66 cattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaacattaatt 165  Q
    ||||||||| |||| |||| ||| |||||||||||||||||||||| |      ||| ||||||| ||||| |||||||||||||||||||||||||||     
T  14161728 cattaataacaacatcttggatgatataacaacattattttctatacc------ttttcacataa-tatatatatttcacattaaccaacaacattaatc 14161636  T
Q  166 attaataacatcatataacatcatagttatcaaca 200  Q
    |||||||||||||||||||||||||||||||||||    
T  14161635 attaataacatcatataacatcatagttatcaaca 14161601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 51 - 161
Target Start/End: Original strand, 12371521 - 12371631
Alignment:
Q  51 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgtatttcacattaa 150  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||| ||||||||| ||  ||| ||||     
T  12371521 ttcacaacatagcatcattaataataacaacttgaatggtataaaaactttattttctatatcatactttttccacgtaaatatatataactcaaattat 12371620  T
Q  151 ccaacaacatt 161  Q
     ||||||||||    
T  12371621 tcaacaacatt 12371631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 55 - 164
Target Start/End: Original strand, 15281505 - 15281612
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaa 154  Q
    |||||||||| ||||| ||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||| | |||||||    
T  15281505 caacatagcaacatta-taataacaacttggatgatataacaacattattttctatatcatacactttccacat-aatatatgtaattcaaaataaccaa 15281602  T
Q  155 caacattaat 164  Q
    ||||||||||    
T  15281603 caacattaat 15281612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 162
Target Start/End: Original strand, 11053876 - 11053979
Alignment:
Q  59 atagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaa 157  Q
    |||||| ||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||| ||||||||||  ||| ||||||||||||    
T  11053876 atagcaacattaataataacaacttgaatgatataaacaacaatattttctatatcatacattttccacat-aatatatgtagctcaaattaaccaacaa 11053974  T
Q  158 catta 162  Q
    |||||    
T  11053975 catta 11053979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 18875514 - 18875455
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18875514 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 18875455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 12371659 - 12371718
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  12371659 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactctt 12371718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 13148140 - 13148081
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  13148140 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactctt 13148081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 13745868 - 13745809
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  13745868 caacaaagatattcacgtgaaaccaagttagatccatcacaacataggttaaatactctt 13745809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 44374330 - 44374389
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  44374330 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactctt 44374389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 44383195 - 44383254
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  44383195 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactctt 44383254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 3289663 - 3289520
Alignment:
Q  22 caacaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacatt 120  Q
    ||||||||||||||||| |||| || |||||  |||||||||| | | ||||||||||||| ||||| ||||| ||||| ||||||||||||||||||||    
T  3289663 caacaacagagacaacaacataaac-aacttg-caacatagcaacgtcaataataacaactcgaatgatataaacaacaatattttctatatcatacatt 3289566  T
Q  121 ttccacataaatatatgtatttcacattaaccaacaacattaattat 167  Q
    |||||||| ||||||||||  |   ||||||||||||||| ||||||    
T  3289565 ttccacat-aatatatgtagcttgaattaaccaacaacatcaattat 3289520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 3287381 - 3287440
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  3287381 caacaaagatattcacgtcaaaccaagttagatccatcacaacatacgttaaatattctt 3287440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 11066852 - 11066911
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  11066852 caacaaagatattcacgtcaaaccaaattagatccatcacaacataagttaaatactctt 11066911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 12127832 - 12127773
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  12127832 caacaaagatattcacgtcaaaccaaattagatccatcacaacatacgttaaatactctt 12127773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 12465928 - 12465869
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  12465928 caacaaagatattcacgtcaaaccaaattagatccatcacaacataagttaaatactctt 12465869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 277 - 332
Target Start/End: Original strand, 25941826 - 25941881
Alignment:
Q  277 aaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25941826 aaagatattcacgtcaaaccaagttagttccatcacaacataggttaaatactctt 25941881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 46386755 - 46386696
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  46386755 caacaaagatattcacgtcaaaccaaattagattcatcacaacataggttaaatactctt 46386696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 273 - 331
Target Start/End: Complemental strand, 13745444 - 13745386
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactct 331  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  13745444 caacaaagatattcacatcaaaccaagttagattcatcacaacataggttaaatactct 13745386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 24270646 - 24270590
Alignment:
Q  276 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  24270646 caaagatattcacgtcaaaccaagttaaattcatcacaacataggttaaatactctt 24270590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 14161522 - 14161463
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||    
T  14161522 caacaaagatattcacgtcaaaccaagtaagatccatcaaaacataggttaaataatctt 14161463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 15720160 - 15720219
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||    
T  15720160 caacaaagatattcacatcaaaccaaattagatccatcacaacataagttaaatactctt 15720219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 19282476 - 19282535
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||    
T  19282476 caacaaagatattcacgtcaaatcaaattagatccattacaacataggttaaatactctt 19282535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 33001298 - 33001357
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||||    
T  33001298 caacaaagatattcacgtcaaaccaaattaggtccatcacaacataggttaaattctctt 33001357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 43277412 - 43277353
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||    
T  43277412 caacaaagatattcacgctaaaccaagttagatccatcacaacatatgttaaatactctt 43277353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 4691560 - 4691504
Alignment:
Q  276 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||    
T  4691560 caaagatattcacgtcaaacctagttagattcatcacaacattggttaaatactctt 4691504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 130
Target Start/End: Complemental strand, 8757206 - 8757130
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataa 130  Q
    ||||||||||  |||||||||||||||||||||| ||| ||||||  |||||||||||||||||||||| |||||||    
T  8757206 caacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcatacatttttcacataa 8757130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 273 - 329
Target Start/End: Complemental strand, 14929000 - 14928944
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatact 329  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||    
T  14929000 caacaaagatattcacgtcaaaccaaattagattcatcacaacataggttagatact 14928944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 273 - 329
Target Start/End: Complemental strand, 15352466 - 15352410
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatact 329  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||    
T  15352466 caacaaagatattcacgtcaaaccaaattagattcatcacaacataggttagatact 15352410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 130
Target Start/End: Complemental strand, 40555553 - 40555477
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataa 130  Q
    ||||||||||  |||||||||||||||||||||| ||| ||||||  ||||||||||||||||||||||||| ||||    
T  40555553 caacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcatacattttccatataa 40555477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 48213609 - 48213553
Alignment:
Q  276 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||    
T  48213609 caaagatattcgcgtcaaaccaagttagattcatcacaacataggttaaatattctt 48213553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 14258736 - 14258795
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||| |||||| ||||||||||||||||| | |||||||||||||    
T  14258736 caacaaagatattcacgtccaaccaaattagatccatcacaacaaatgttaaatactctt 14258795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 21735312 - 21735237
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggta-taacaacattattttctatatcatacattttccacata 129  Q
    ||||||||||  |||||||||||||||||||||| || |||||||  |||||||||| ||||||||||||||||||    
T  21735312 caacatagcaatattaataataacaacttgaatgataataacaacgatattttctatctcatacattttccacata 21735237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 22 - 157
Target Start/End: Original strand, 33001171 - 33001303
Alignment:
Q  22 caacaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattt 121  Q
    ||||| |||||||| || |||| | ||||||  |||||||||| | ||||||| || |||||| ||| || |||||||| ||||||||||||||||||||    
T  33001171 caacagcagagacagcaacataaaacaacttg-caacatagcaacgttaataacaataacttggatgatacaacaacataattttctatatcatacattt 33001269  T
Q  122 tccacataaatatatgtatttcacattaaccaacaa 157  Q
    | ||||| ||||||||||| ||| |||| |||||||    
T  33001270 t-cacat-aatatatgtatctcaaattatccaacaa 33001303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 22 - 130
Target Start/End: Complemental strand, 832864 - 832757
Alignment:
Q  22 caacaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacatt 120  Q
    ||||||||||||||||| |||| | ||||||  ||||||||||  |||||||||||||||||||||| ||| || |||  |||||||| |||||||||||    
T  832864 caacaacagagacaacaacata-agcaacttg-caacatagcaatattaataataacaacttgaatgatataaaaaacgatattttctttatcatacatt 832767  T
Q  121 ttccacataa 130  Q
    |||| |||||    
T  832766 ttcctcataa 832757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 22 - 130
Target Start/End: Complemental strand, 1198044 - 1197937
Alignment:
Q  22 caacaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacatt 120  Q
    ||||||||||||||||| |||| | ||||||  ||||||||||  |||||||||||||||||||||| ||| || |||  |||||||| |||||||||||    
T  1198044 caacaacagagacaacaacata-agcaacttg-caacatagcaatattaataataacaacttgaatgatataaaaaacgatattttctttatcatacatt 1197947  T
Q  121 ttccacataa 130  Q
    |||| |||||    
T  1197946 ttcctcataa 1197937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 279 - 332
Target Start/End: Original strand, 13894485 - 13894538
Alignment:
Q  279 agatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||| |||| |||||| ||||||||||||||||||||||||||    
T  13894485 agatattcacgtcaagccaaattagattcatcacaacataggttaaatactctt 13894538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 130
Target Start/End: Original strand, 4325310 - 4325374
Alignment:
Q  67 attaataataacaacttgaatggta-taacaacattattttctatatcatacattttccacataa 130  Q
    |||||||||||||||||||||| || |||||||  ||||||||||||||||||||||| ||||||    
T  4325310 attaataataacaacttgaatgataataacaacgatattttctatatcatacattttcaacataa 4325374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 130
Target Start/End: Original strand, 13408014 - 13408090
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggt-ataacaacattattttctatatcatacattttccacataa 130  Q
    ||||||||||  |||||||||||||||||||||| | || |||||  |||||||||||||||||||||||| |||||    
T  13408014 caacatagcaatattaataataacaacttgaatgataattacaacgatattttctatatcatacattttcctcataa 13408090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 130
Target Start/End: Complemental strand, 13865196 - 13865120
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggta-taacaacattattttctatatcatacattttccacataa 130  Q
    ||||||||||  ||||||||||||||||| |||| || |||||||  |||||||||||||||||||||||| |||||    
T  13865196 caacatagcaatattaataataacaacttcaatgataataacaacgatattttctatatcatacattttcctcataa 13865120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 276 - 328
Target Start/End: Complemental strand, 15576495 - 15576443
Alignment:
Q  276 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatac 328  Q
    ||||||||||||||||||||||||||||||  ||||||||||| |||||||||    
T  15576495 caaagatattcacgtcaaaccaagttagattaatcacaacataagttaaatac 15576443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 273 - 329
Target Start/End: Original strand, 16580044 - 16580100
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatact 329  Q
    ||||||||||||||||||| |||||| ||||||||||||||||| | ||||||||||    
T  16580044 caacaaagatattcacgtccaaccaaattagatccatcacaacacatgttaaatact 16580100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 273 - 329
Target Start/End: Complemental strand, 16585619 - 16585563
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatact 329  Q
    ||||||||||||||||||| |||||| ||||||||||||||||| | ||||||||||    
T  16585619 caacaaagatattcacgtccaaccaaattagatccatcacaacacatgttaaatact 16585563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 20253006 - 20252950
Alignment:
Q  276 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||| | ||||||||||| ||||| ||||||||||||||||||||||||||    
T  20253006 caaagatatttatgtcaaaccaagatagattcatcacaacataggttaaatactctt 20252950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 292 - 332
Target Start/End: Complemental strand, 39292385 - 39292345
Alignment:
Q  292 aaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  39292385 aaaccaagttagatccatcacaacataggttaaatactctt 39292345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 8851827 - 8851768
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||| ||||||||| ||||||||| ||||||||||||| |||||||||||||| ||||    
T  8851827 caacaacgatattcacatcaaaccaaattagatccatcaccacataggttaaataatctt 8851768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 20585740 - 20585799
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||| || ||||| ||||||||| ||||||||||||||||||| |||||||||||||    
T  20585740 caacaaaaatgttcacatcaaaccaaattagatccatcacaacataagttaaatactctt 20585799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 20619670 - 20619729
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||| ||||||||| ||||||||| ||||||||||||| || ||||||||||||||||    
T  20619670 caacaaggatattcacatcaaaccaaattagatccatcaccacgtaggttaaatactctt 20619729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 32301566 - 32301625
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||| ||||||||||| |||||| ||||||||||||||||| | |||||||||||||    
T  32301566 caacaaatatattcacgtccaaccaaattagatccatcacaacacatgttaaatactctt 32301625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 16460600 - 16460546
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaata 327  Q
    ||||||||||||||||||| |||||| ||||||||||||||||| | ||||||||    
T  16460600 caacaaagatattcacgtccaaccaaattagatccatcacaacacatgttaaata 16460546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 292 - 332
Target Start/End: Complemental strand, 21675557 - 21675517
Alignment:
Q  292 aaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  21675557 aaacaaagttagatccatcacaacataggttaaatactctt 21675517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 200
Target Start/End: Complemental strand, 13134134 - 13134091
Alignment:
Q  157 acattaattattaataacatcatataacatcatagttatcaaca 200  Q
    |||||||| ||||||||||||| |||||||||||||||||||||    
T  13134134 acattaatcattaataacatcacataacatcatagttatcaaca 13134091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 128
Target Start/End: Complemental strand, 12755504 - 12755442
Alignment:
Q  67 attaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacat 128  Q
    |||||| ||||||||||||||  ||||| ||||  ||||||||||||||||||||||||||||    
T  12755504 attaatcataacaacttgaattatataaacaacgatattttctatatcatacattttccacat 12755442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 159
Target Start/End: Complemental strand, 15096495 - 15096392
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 153  Q
    ||||||| || |||||| || ||||||||||||| ||| ||||||| ||||| |||||||||||| | | ||||||| ||||||||| ||| |||| |||    
T  15096495 caacataacaacattaacaacaacaacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataa-tatatgtatctcaaattatcca 15096398  T
Q  154 acaaca 159  Q
    ||||||    
T  15096397 acaaca 15096392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 17071099 - 17071030
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttc 123  Q
    |||||||||| ||| ||||||||||||||||||| ||| ||||| | || ||| ||||||||||||||||    
T  17071099 caacatagcaacatcaataataacaacttgaatgatataaacaataataatttttatatcatacattttc 17071030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 130
Target Start/End: Complemental strand, 14191887 - 14191823
Alignment:
Q  67 attaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataa 130  Q
    |||||||||||||||||||||| ||| ||||||  |||||||||||||| |||||| || |||||    
T  14191887 attaataataacaacttgaatgatataaacaacgatattttctatatcacacatttccctcataa 14191823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 329
Target Start/End: Original strand, 20487827 - 20487883
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatact 329  Q
    |||||||||||||||||||  | ||| ||||||||||||||||| | ||||||||||    
T  20487827 caacaaagatattcacgtccgagcaaattagatccatcacaacacatgttaaatact 20487883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 32434258 - 32434198
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatcc-atcacaacataggttaaatactctt 332  Q
    ||||||| |||||||||||||||||| ||||||||  ||| ||||||| ||||||||||||    
T  32434258 caacaaatatattcacgtcaaaccaaattagatcctttcataacatagattaaatactctt 32434198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 332
Target Start/End: Original strand, 46473490 - 46473530
Alignment:
Q  292 aaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||| | ||||||||||||||||||||    
T  46473490 aaaccaagttagatccattaaaacataggttaaatactctt 46473530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 330
Target Start/End: Original strand, 48743698 - 48743744
Alignment:
Q  284 ttcacgtcaaaccaagttagatccatcacaacataggttaaatactc 330  Q
    ||||||||||||||| |||||| ||||| |||||| |||||||||||    
T  48743698 ttcacgtcaaaccaacttagattcatcagaacatatgttaaatactc 48743744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 59230 - 59161
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttc 123  Q
    |||||||||| ||| ||||||||||| || |||| ||||| ||| | || ||||||||||||||||||||    
T  59230 caacatagcaacatcaataataacaatttaaatgatataaacaataataatttctatatcatacattttc 59161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 159
Target Start/End: Original strand, 15139364 - 15139467
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 153  Q
    ||||||| || |||||| | ||||||||||| || ||||| ||||| ||||| |||||||||||| | | ||||||| ||||||||| ||| |||| |||    
T  15139364 caacataacaacattaacactaacaacttgattgatataaacaacaatattt-ctatatcatacaatgttcacataa-tatatgtatctcaaattatcca 15139461  T
Q  154 acaaca 159  Q
    ||||||    
T  15139462 acaaca 15139467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 159
Target Start/End: Complemental strand, 19558135 - 19558032
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 153  Q
    ||||||| || ||| ||||| ||||||||||||| ||| ||||||  ||||| |||||||||||| | | ||||||| ||||||||| ||| |||| |||    
T  19558135 caacataacaacatcaataacaacaacttgaatgatatgaacaactatattt-ctatatcatacaatattcacataa-tatatgtatctcaaattatcca 19558038  T
Q  154 acaaca 159  Q
    ||||||    
T  19558037 acaaca 19558032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 305
Target Start/End: Complemental strand, 1489939 - 1489907
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagat 305  Q
    |||||||||||||||||||||||||| ||||||    
T  1489939 caacaaagatattcacgtcaaaccaaattagat 1489907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 164
Target Start/End: Original strand, 4071024 - 4071075
Alignment:
Q  112 tcatacattttccacataaatatatgtatttcacattaaccaacaacattaat 164  Q
    ||||||| ||||| ||||| ||||||||| ||| |||||||||||||||||||    
T  4071024 tcatacaatttcctcataa-tatatgtatctcaaattaaccaacaacattaat 4071075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 332
Target Start/End: Complemental strand, 8564239 - 8564199
Alignment:
Q  292 aaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||| |||||| |||||| ||||||||||||||||||||||    
T  8564239 aaacaaagttaaatccattacaacataggttaaatactctt 8564199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 156
Target Start/End: Original strand, 11303182 - 11303226
Alignment:
Q  113 catacattttccacataa-atatatgtatttcacattaaccaaca 156  Q
    |||| ||||||||||||| |||||| |||||||||||||||||||    
T  11303182 catatattttccacataatatatatatatttcacattaaccaaca 11303226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 67 - 114
Target Start/End: Original strand, 11309537 - 11309585
Alignment:
Q  67 attaataataacaacttgaatggtat-aacaacattattttctatatca 114  Q
    |||||||||||||||||||||  ||| ||||||| ||||||||||||||    
T  11309537 attaataataacaacttgaataatataaacaacaatattttctatatca 11309585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 16108925 - 16108882
Alignment:
Q  112 tcatacattttccacataaatatatgtatttcacattaaccaaca 156  Q
    ||||| ||||||||||||| ||||| |||||||||||||||||||    
T  16108925 tcatatattttccacataa-tatatatatttcacattaaccaaca 16108882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 332
Target Start/End: Complemental strand, 21538836 - 21538797
Alignment:
Q  292 aaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||| ||||| |||||||||||||||||||||||||    
T  21538836 aaaccaagt-agatctatcacaacataggttaaatactctt 21538797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 142; Significance: 2e-74; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 28 - 189
Target Start/End: Complemental strand, 19435609 - 19435448
Alignment:
Q  28 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 127  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  19435609 cagagacaacaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattgttttctatatcataccttttccaca 19435510  T
Q  128 taaatatatgtatttcacattaaccaacaacattaattattaataacatcatataacatcat 189  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  19435509 taaatatatgtatttcacattaaccaacaacattaatcattaataacatcatataacatcat 19435448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 28 - 180
Target Start/End: Original strand, 37018818 - 37018970
Alignment:
Q  28 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 127  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  37018818 cagagacaacaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcataccttttccaca 37018917  T
Q  128 taaatatatgtatttcacattaaccaacaacattaattattaataacatcata 180  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  37018918 taaatatatgtatttcacattaaccaacaacattaatcattaataacatcata 37018970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 28 - 135
Target Start/End: Original strand, 16997747 - 16997854
Alignment:
Q  28 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 127  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16997747 cagagacaacaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 16997846  T
Q  128 taaatata 135  Q
    ||||||||    
T  16997847 taaatata 16997854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 26 - 139
Target Start/End: Original strand, 42875017 - 42875130
Alignment:
Q  26 aacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttcca 125  Q
    |||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  42875017 aacagagacagcaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatactttttcca 42875116  T
Q  126 cataaatatatgta 139  Q
    ||||||||||||||    
T  42875117 cataaatatatgta 42875130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 24 - 139
Target Start/End: Original strand, 14548842 - 14548957
Alignment:
Q  24 acaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttc 123  Q
    |||||||||||| || |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  14548842 acaacagagacagcaacatacaacaacttcacaacataacatcattaataataacaacttgaatggtataacaacattattttctatatcataccttttc 14548941  T
Q  124 cacataaatatatgta 139  Q
    |||||| |||||||||    
T  14548942 cacatacatatatgta 14548957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 29 - 139
Target Start/End: Original strand, 25090874 - 25090984
Alignment:
Q  29 agagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacat 128  Q
    ||||| |||| || ||| ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  25090874 agagaaaacaacacacaacaacttcacaacataacatcattaataataacaacttgaatgatataacaacattattttctatatcatacattttccacat 25090973  T
Q  129 aaatatatgta 139  Q
    |||||||||||    
T  25090974 aaatatatgta 25090984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 51 - 138
Target Start/End: Original strand, 19609567 - 19609654
Alignment:
Q  51 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgt 138  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19609567 ttcacaacatagcatcattaataataacaacttgaatggtttaacaacattattttctatatcatacattttccacataaatatatgt 19609654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 31 - 139
Target Start/End: Complemental strand, 10357265 - 10357157
Alignment:
Q  31 agacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataa 130  Q
    |||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| || |||    
T  10357265 agacaacaacatacaacaacttcacaacataacatcattaataataacaacttgaatggtataacaacattattttctatatcatatcttttctacgtaa 10357166  T
Q  131 atatatgta 139  Q
    |||||||||    
T  10357165 atatatgta 10357157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 28 - 139
Target Start/End: Original strand, 11425174 - 11425286
Alignment:
Q  28 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacatta-ttttctatatcatacattttccac 126  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||| ||||||||||||||| | ||||||    
T  11425174 cagagacaacaacatacatcaacttcacaacatagcatcattaataataacaacatgaatgatataacaatattatttttctatatcatacctattccac 11425273  T
Q  127 ataaatatatgta 139  Q
    |||||||||||||    
T  11425274 ataaatatatgta 11425286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 33244087 - 33243998
Alignment:
Q  28 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatac 117  Q
    |||||||| || ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33244087 cagagacatcaacatacaataacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatac 33243998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 55 - 167
Target Start/End: Complemental strand, 4615876 - 4615764
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 153  Q
    ||||||||||  |||||||||||||||||||||| ||||| ||||  |||||||||||||||||||||||||||| ||||||||||  ||| ||||||||    
T  4615876 caacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcatacattttccacat-aatatatgtaactcaaattaacca 4615778  T
Q  154 acaacattaattat 167  Q
    ||||||| ||||||    
T  4615777 acaacatcaattat 4615764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 19435366 - 19435307
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19435366 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 19435307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 23 - 159
Target Start/End: Original strand, 3485129 - 3485262
Alignment:
Q  23 aacaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacatttt 122  Q
    |||||||||||||||| |||||| |||||| | | ||||||| ||||||||||||| ||||| ||||||||||||||||| ||||||||||||||| | |    
T  3485129 aacaacagagacaacaacatacaacaacttga-atcatagcaacattaataataaccacttggatggtataacaacatta-tttctatatcatacaatat 3485226  T
Q  123 ccacataaatatatgtatttcacattaaccaacaaca 159  Q
     ||||| ||||||||||| ||| ||||  ||||||||    
T  3485227 tcacat-aatatatgtatctcaaattattcaacaaca 3485262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 11425339 - 11425398
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  11425339 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactctt 11425398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 16997914 - 16997973
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  16997914 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactctt 16997973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 53631141 - 53631082
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  53631141 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactctt 53631082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 55 - 167
Target Start/End: Original strand, 27027977 - 27028089
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 153  Q
    ||||||||||  |||||||||||||||||||||| ||| ||||||  || ||||||||||||||||||||||||| ||||||| || || | ||||||||    
T  27027977 caacatagcaatattaataataacaacttgaatgatataaacaacgatactttctatatcatacattttccacat-aatatatatagtttaaattaacca 27028075  T
Q  154 acaacattaattat 167  Q
    ||||||| ||||||    
T  27028076 acaacatcaattat 27028089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 26922336 - 26922280
Alignment:
Q  276 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26922336 caaagatattcacgtcaaaccaagttagattcatcacaacataggttaaatactctt 26922280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 10357104 - 10357045
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  10357104 caacaaagatattcacgtcaaaccaaataagatccatcacaacataggttaaatactctt 10357045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 14549010 - 14549069
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  14549010 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggctaaatactctt 14549069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 14630210 - 14630265
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatac 328  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  14630210 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatac 14630265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 15344261 - 15344320
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  15344261 caacaaagatattcacgtcaaaccaaattagatccatcataacataggttaaatactctt 15344320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 37019053 - 37019112
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  37019053 caacaaaaatattcacgtcaaaccaagttagatccatcacagcataggttaaatactctt 37019112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 2585052 - 2584909
Alignment:
Q  22 caacaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacatt 120  Q
    |||||||||||||| || |||| || |||||  ||||||| || | ||||||||||||||| ||||| ||||| ||||| ||||||||||||||||||||    
T  2585052 caacaacagagacagcaacataaac-aacttg-caacataacaacgttaataataacaactcgaatgatataaacaacaatattttctatatcatacatt 2584955  T
Q  121 ttccacataaatatatgtatttcacattaaccaacaacattaattat 167  Q
    |||||||| ||||||||||  |   ||||||||||||||| ||||||    
T  2584954 ttccacat-aatatatgtagcttgaattaaccaacaacatcaattat 2584909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 161
Target Start/End: Original strand, 21061743 - 21061874
Alignment:
Q  29 agagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccaca 127  Q
    |||||||||| |||| | ||||||  |||||||||| ||||||||| ||||||||||||| ||| |||| || |||||||||||||| ||||||||||||    
T  21061743 agagacaacaacataaaacaacttg-caacatagcaacattaataacaacaacttgaatgatataaacatcaatattttctatatcaaacattttccaca 21061841  T
Q  128 taaatatatgtatttcacattaaccaacaacatt 161  Q
    | |||| ||||| || | | ||||||||||||||    
T  21061842 t-aataaatgtaattgaaaataaccaacaacatt 21061874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 273 - 330
Target Start/End: Original strand, 42875183 - 42875240
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactc 330  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  42875183 caacaaagatattcatgtcaaaccaaattagatccatcacaacataggttaaatactc 42875240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 35660233 - 35660289
Alignment:
Q  276 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  35660233 caaagatattcacgtcaaaccaaattagattcatcacaacataggttaaatactctt 35660289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 13036445 - 13036386
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||    
T  13036445 caacaaagatattcacgtcaaactaaattagatccatcacaatataggttaaatactctt 13036386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 167
Target Start/End: Original strand, 13446662 - 13446806
Alignment:
Q  21 tcaacaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacat 119  Q
    |||||||||||||||||| |||| | ||||||  |||||||||| | ||||||||||||||| ||||| ||| ||||||  |||||||||| ||||||||    
T  13446662 tcaacaacagagacaacaacata-agcaacttg-caacatagcaacgttaataataacaactcgaatgatataaacaacgatattttctatctcatacat 13446759  T
Q  120 tttccacataaatatatgtatttcacattaaccaacaacattaattat 167  Q
    ||| ||||| ||||||||||  |   ||||||||||||||| ||||||    
T  13446760 ttttcacat-aatatatgtagcttgaattaaccaacaacatcaattat 13446806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 277 - 332
Target Start/End: Original strand, 14508150 - 14508205
Alignment:
Q  277 aaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  14508150 aaagatattcacgtcaaaccaagatagattcatcacaacataggttaaatactctt 14508205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 277 - 332
Target Start/End: Complemental strand, 19566582 - 19566527
Alignment:
Q  277 aaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  19566582 aaagatattcacgtcaaaccaagttagatttatcacaacataggttaaatactctt 19566527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 25513127 - 25513186
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||    
T  25513127 caacaaagatattcacatcaaaccaagttagatctatcacaacataggttaaatattctt 25513186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 277 - 332
Target Start/End: Original strand, 26445273 - 26445328
Alignment:
Q  277 aaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  26445273 aaagatattcacgtcaaaccaagatatatccatcacaacataggttaaatactctt 26445328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 55582588 - 55582647
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||    
T  55582588 caacaaagatattcacatcaaatcaagttagatccatcacaacatagattaaatactctt 55582647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 6511785 - 6511928
Alignment:
Q  22 caacaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacatt 120  Q
    ||||||||||| ||||| |||| || ||||| | || |||||| | ||||||||||||||| ||||| ||||| ||||| ||||||||||||||||||||    
T  6511785 caacaacagaggcaacaacataaac-aacttga-aatatagcaacgttaataataacaactcgaatgatataaacaacaatattttctatatcatacatt 6511882  T
Q  121 ttccacataaatatatgtatttcacattaaccaacaacattaattat 167  Q
    ||| |||| ||||||||||  |   ||||||||||||||| ||||||    
T  6511883 ttctacat-aatatatgtagcttgaattaaccaacaacatcaattat 6511928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 274 - 332
Target Start/End: Original strand, 25091038 - 25091096
Alignment:
Q  274 aacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||    
T  25091038 aacaaagatattcacgtcaaagcaaattagatccatcacaacattggttaaatactctt 25091096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 279 - 332
Target Start/End: Original strand, 3337489 - 3337542
Alignment:
Q  279 agatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  3337489 agatattcacgtcaaaccaaattagattcatcacaacataggttaaatactctt 3337542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 167
Target Start/End: Complemental strand, 14933251 - 14933139
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 153  Q
    ||||||||||  |||||||||||||||||||||| | ||| ||||  ||||||||||||||||||||||||||||||  |||| ||  | | ||||||||    
T  14933251 caacatagcaatattaataataacaacttgaatgatgtaaacaacgatattttctatatcatacattttccacataac-atatatagcttaaattaacca 14933153  T
Q  154 acaacattaattat 167  Q
    ||||||| ||||||    
T  14933152 acaacatcaattat 14933139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 45315001 - 45314945
Alignment:
Q  276 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  45315001 caaagatattcacgtcaaaccaagttagattcatcttaacataggttaaatactctt 45314945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 19609708 - 19609767
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||| |||||| ||||||||||| |||| ||||||||||||||||||||||||||||    
T  19609708 caacaaaaatattcgcgtcaaaccaaattaggtccatcacaacataggttaaatactctt 19609767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 9923437 - 9923483
Alignment:
Q  154 acaacattaattattaataacatcatataacatcatagttatcaaca 200  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||    
T  9923437 acaacattaataattaataacatcatataacatcatagttatcaaca 9923483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 167
Target Start/End: Complemental strand, 14942457 - 14942344
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataa-atatatgtatttcacattaacc 152  Q
    ||||||||||  |||||||||||||||||||||| | ||| ||||  ||||||||| |||||||||||||||||||| |||||| ||  | | |||||||    
T  14942457 caacatagcaatattaataataacaacttgaatgatgtaaacaacgatattttctagatcatacattttccacataacatatat-tagcttaaattaacc 14942359  T
Q  153 aacaacattaattat 167  Q
    |||||||| ||||||    
T  14942358 aacaacatcaattat 14942344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 22 - 130
Target Start/End: Complemental strand, 15448252 - 15448145
Alignment:
Q  22 caacaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacatt 120  Q
    ||||| ||||||||||| |||| | ||||||  |||||||| |  ||||||||||| |||||||||| ||||| ||||  ||||||||||||||||||||    
T  15448252 caacagcagagacaacaacata-agcaacttg-caacatagaaatattaataataaaaacttgaatgatataaacaacgatattttctatatcatacatt 15448155  T
Q  121 ttccacataa 130  Q
    ||||||||||    
T  15448154 ttccacataa 15448145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 67 - 167
Target Start/End: Complemental strand, 20899558 - 20899458
Alignment:
Q  67 attaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaacattaatt 165  Q
    |||||||| ||||||||||||| ||||| ||||   ||||||||||||||||||||||||||| ||||||| ||  | | ||||||||||||||| ||||    
T  20899558 attaataacaacaacttgaatgatataaacaacgacattttctatatcatacattttccacat-aatatatatagcttaaattaaccaacaacatcaatt 20899460  T
Q  166 at 167  Q
    ||    
T  20899459 at 20899458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 277 - 332
Target Start/End: Complemental strand, 2425284 - 2425229
Alignment:
Q  277 aaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||| |||||||||| | ||| ||||||||||||||||||||||||||    
T  2425284 aaagatattcacatcaaaccaagattgattcatcacaacataggttaaatactctt 2425229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 3485295 - 3485354
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||| |||||||||||| | || ||||||||    
T  3485295 caacaaagatattcacgtcaaaccaaattagattcatcacaacatatgctagatactctt 3485354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 18229899 - 18229974
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggta-taacaacattattttctatatcatacattttccacata 129  Q
    ||||||||||  ||||||| |||||||||||||| || |||||||  |||||||||| ||||||||||||||||||    
T  18229899 caacatagcaatattaatattaacaacttgaatgataataacaacgatattttctatctcatacattttccacata 18229974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 33243964 - 33243905
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||| |||||||||||||| ||| ||||||||||||||||||||||||  |||||||    
T  33243964 caacaaaaatattcacgtcaaatcaaattagatccatcacaacataggttagctactctt 33243905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 11479422 - 11479376
Alignment:
Q  154 acaacattaattattaataacatcatataacatcatagttatcaaca 200  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||    
T  11479422 acaacattaataataaataacatcatataacatcatagttatcaaca 11479376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 123
Target Start/End: Original strand, 9638247 - 9638316
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttc 123  Q
    |||||||||| ||| ||||||||||||||||||| ||| ||||| | || ||||||||||||||||||||    
T  9638247 caacatagcaacatcaataataacaacttgaatgatataaacaataataatttctatatcatacattttc 9638316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 103
Target Start/End: Original strand, 19734509 - 19734589
Alignment:
Q  23 aacaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaac-ttgaatggtataacaacattat 103  Q
    |||||||||||||||| |||||| |||||| | | ||||||| ||||||||||||| || ||| ||||||||||||||||||    
T  19734509 aacaacagagacaacaacatacaacaacttga-atcatagcaacattaataataaccactttggatggtataacaacattat 19734589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 280 - 332
Target Start/End: Original strand, 15114614 - 15114666
Alignment:
Q  280 gatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||| ||||||||| ||||||||||||  |||||||||||||||||||    
T  15114614 gatattcacatcaaaccaaattagatccatcagcacataggttaaatactctt 15114666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 276 - 324
Target Start/End: Complemental strand, 16026592 - 16026544
Alignment:
Q  276 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaa 324  Q
    ||||||||||||||||| |||||||||||| ||||||||||| ||||||    
T  16026592 caaagatattcacgtcataccaagttagattcatcacaacatgggttaa 16026544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 200
Target Start/End: Original strand, 14629251 - 14629294
Alignment:
Q  157 acattaattattaataacatcatataacatcatagttatcaaca 200  Q
    |||||||| |||||||||||||||| ||||||||||||||||||    
T  14629251 acattaatcattaataacatcatatcacatcatagttatcaaca 14629294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 200
Target Start/End: Original strand, 35659973 - 35660016
Alignment:
Q  157 acattaattattaataacatcatataacatcatagttatcaaca 200  Q
    |||||||| |||||||||||||||||||||| ||||||||||||    
T  35659973 acattaatcattaataacatcatataacatcgtagttatcaaca 35660016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 156
Target Start/End: Complemental strand, 49547987 - 49547946
Alignment:
Q  114 atacattttccacataaatatatgtatttcacattaaccaaca 156  Q
    ||||||||||||||||| ||||| |||||||||||||||||||    
T  49547987 atacattttccacataa-tatatatatttcacattaaccaaca 49547946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 9871378 - 9871309
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttc 123  Q
    |||||||| | ||| |||||||||||||||| || ||||| ||| | || ||||||||||||||||||||    
T  9871378 caacatagaaacatcaataataacaacttgactgatataaacaataataatttctatatcatacattttc 9871309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 123
Target Start/End: Original strand, 51992763 - 51992832
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttc 123  Q
    |||||||||| ||| || |||||||||||||||| ||| ||||| | || |||| |||||||||||||||    
T  51992763 caacatagcaacatcaacaataacaacttgaatgatataaacaataataatttccatatcatacattttc 51992832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 156
Target Start/End: Original strand, 15534116 - 15534160
Alignment:
Q  113 catacattttccacataa-atatatgtatttcacattaaccaaca 156  Q
    |||| ||||||||||||| |||||| |||||||||||||||||||    
T  15534116 catatattttccacataatatatatatatttcacattaaccaaca 15534160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 137; Significance: 2e-71; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 28 - 200
Target Start/End: Complemental strand, 22259201 - 22259031
Alignment:
Q  28 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 127  Q
    ||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  22259201 cagagacaacaacatacaacaacttcacaacatggcatcattaataataacaacttgaatggtataacaacattattttctatatcatacctttt-caca 22259103  T
Q  128 taaatatatgtatttcacattaaccaacaacattaattattaataacatcatataacatcatagttatcaaca 200  Q
    | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  22259102 t-aatatatgtatttcacattaaccaacaacattaatcattaataacatcatataacatcatagttatcaaca 22259031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 51 - 139
Target Start/End: Original strand, 19140008 - 19140096
Alignment:
Q  51 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 139  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19140008 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 19140096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 31 - 135
Target Start/End: Complemental strand, 20179350 - 20179246
Alignment:
Q  31 agacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataa 130  Q
    |||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  20179350 agacaacaacatacaacaacttcacaacataacatcattaataataacaacttgaatggtataacaacattattttctatatcataccttttccacataa 20179251  T
Q  131 atata 135  Q
    |||||    
T  20179250 atata 20179246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 51 - 139
Target Start/End: Complemental strand, 39936819 - 39936731
Alignment:
Q  51 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 139  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  39936819 ttcacaacatagcatcattaataataacaacttgaatggtataaccacattattttctatatcataccttttccacataaatatatgta 39936731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 22 - 164
Target Start/End: Complemental strand, 17907811 - 17907670
Alignment:
Q  22 caacaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacatt 120  Q
    ||||| ||||||||||| |||| | ||||||  |||||||||| ||||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||    
T  17907811 caacagcagagacaacaacataaaacaacttg-caacatagcaacattaataatatcaacttgaatgatatgaacaacaatattttctatatcatacttt 17907713  T
Q  121 ttccacataaatatatgtatttcacattaaccaacaacattaat 164  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  17907712 ttccacataa-tatatgtatttcacattaaccaacaacattaat 17907670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 29 - 139
Target Start/End: Complemental strand, 42818738 - 42818628
Alignment:
Q  29 agagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacat 128  Q
    |||||||||| |||||| ||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||  |||||| |||    
T  42818738 agagacaacaacatacaacaacttcacaacatatcatcgttaataataaaaacttgaatggtataacaacattattttctatatcatatcttttcctcat 42818639  T
Q  129 aaatatatgta 139  Q
    |||||||||||    
T  42818638 aaatatatgta 42818628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 22 - 164
Target Start/End: Original strand, 17217798 - 17217938
Alignment:
Q  22 caacaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattt 121  Q
    ||||| |||||||| || |||| | ||||||  |||||||||| ||||||||||||||||||  ||| ||||||||||||||||||||||||||||| ||    
T  17217798 caacagcagagacagcaacataaaacaacttg-caacatagcaacattaataataacaacttagatgatataacaacattattttctatatcatacactt 17217896  T
Q  122 tccacataaatatatgtatttcacattaaccaacaacattaat 164  Q
    ||||||| |||||||||| |||| | ||||| |||||||||||    
T  17217897 tccacat-aatatatgtaattcaaaataaccgacaacattaat 17217938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 5760917 - 5760976
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  5760917 caacaaagatattcacgtcaaaccaatttagatccatcacaacataggttaaatactctt 5760976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 20179189 - 20179130
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  20179189 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactctt 20179130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 20517785 - 20517726
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  20517785 caacaaagatattcacgtcaaaccaagttagatccatcgcaacataggttaaatactctt 20517726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 22344426 - 22344485
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22344426 caacaaagatattcacgtcaaaccaagttagattcatcacaacataggttaaatactctt 22344485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 22356086 - 22356145
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22356086 caacaaagatattcacgtcaaaccaagttagattcatcacaacataggttaaatactctt 22356145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 66 - 164
Target Start/End: Original strand, 23888977 - 23889075
Alignment:
Q  66 cattaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaacattaat 164  Q
    ||||||||||||||||||||| | ||||| ||||| ||| |||||||||||||||||||||||| ||||||||||  ||| |||||||||||||||||||    
T  23888977 cattaataataacaacttgaacgatataaacaacaatatcttctatatcatacattttccacat-aatatatgtagctcaaattaaccaacaacattaat 23889075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 36305043 - 36305102
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36305043 caacaaaggtattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 36305102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 39936678 - 39936619
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  39936678 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactctt 39936619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 4381457 - 4381401
Alignment:
Q  276 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  4381457 caaagatattcacgtcaaaccaagttagattcatcacaacataggttaaatactctt 4381401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 273 - 329
Target Start/End: Original strand, 19140149 - 19140205
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatact 329  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19140149 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatact 19140205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 22474139 - 22474195
Alignment:
Q  276 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22474139 caaagatattcacgtcaaaccaagttagattcatcacaacataggttaaatactctt 22474195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 6102420 - 6102362
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  6102420 caacaaagatattcacgtcaaaccaa-ttagatccatcacaacataggttaaatactctt 6102362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 22483131 - 22483190
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  22483131 caacaaagatattcacatcaaaccaagttagatccatcacaacataagttaaatactctt 22483190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 55 - 164
Target Start/End: Original strand, 23947442 - 23947549
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 153  Q
    |||||||||| ||||||||||||||||||||||| ||| ||||| | |||||||||||||||||| ||||||||| ||||||||||  ||| ||||||||    
T  23947442 caacatagcaacattaataataacaacttgaatgatataaacaataatattttctatatcataca-tttccacat-aatatatgtagctca-attaacca 23947538  T
Q  154 acaacattaat 164  Q
    | |||||||||    
T  23947539 aaaacattaat 23947549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 163
Target Start/End: Complemental strand, 22584545 - 22584437
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 153  Q
    |||||||||| ||||||||||||| ||||||||| ||| ||||||  ||||||| |||||||||||||| ||||| ||||||||||  | | ||||||||    
T  22584545 caacatagcaacattaataataaccacttgaatgatataaacaacgatattttcaatatcatacatttttcacat-aatatatgtagcttagattaacca 22584447  T
Q  154 acaacattaa 163  Q
    ||||||||||    
T  22584446 acaacattaa 22584437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 24713384 - 24713457
Alignment:
Q  24 acaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaa 97  Q
    |||||||||||| || |||||| ||||||||||||||| |||||||||||||||||| ||||||| ||||||||    
T  24713384 acaacagagacagcaacatacaacaacttcacaacataacatcattaataataacaatttgaatgatataacaa 24713457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 18817126 - 18817070
Alignment:
Q  276 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  18817126 caaagatattcacgtcaaaccaagttacattcatcacaacataggttaaatactctt 18817070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 20084305 - 20084247
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  20084305 caacaaagatattcacgtcaaaccaa-ttagatccatcacaacataggttaaataatctt 20084247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 55 - 164
Target Start/End: Original strand, 22244645 - 22244753
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 153  Q
    |||||||| | ||||||||||||||||||||| | ||||| ||| | ||||||||||||||||||||||| |||| ||||||||||  | | ||||||||    
T  22244645 caacatagaaacattaataataacaacttgaaagatataaacaataatattttctatatcatacattttcaacat-aatatatgtagctta-attaacca 22244742  T
Q  154 acaacattaat 164  Q
    |||||||||||    
T  22244743 acaacattaat 22244753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 277 - 329
Target Start/End: Complemental strand, 17979080 - 17979028
Alignment:
Q  277 aaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatact 329  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  17979080 aaagatattcacgtcaaaccaagatagattcatcacaacataggttaaatact 17979028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 18815487 - 18815431
Alignment:
Q  276 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  18815487 caaatatattcacgtgaaaccaagttagattcatcacaacataggttaaatactctt 18815431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 276 - 328
Target Start/End: Complemental strand, 36733178 - 36733126
Alignment:
Q  276 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatac 328  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  36733178 caaagatattaacgtcaaaccaagttagattcatcacaacataggttaaatac 36733126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 279 - 332
Target Start/End: Complemental strand, 361874 - 361821
Alignment:
Q  279 agatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||| ||||||||| |||||| ||||||||||||||||||||||||||    
T  361874 agatattcacatcaaaccaaattagattcatcacaacataggttaaatactctt 361821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 276 - 329
Target Start/End: Original strand, 5080396 - 5080449
Alignment:
Q  276 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatact 329  Q
    |||| |||||||||||||||||||| |||| |||||||||||||||||||||||    
T  5080396 caaatatattcacgtcaaaccaagtaagattcatcacaacataggttaaatact 5080449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 139
Target Start/End: Complemental strand, 20084470 - 20084358
Alignment:
Q  23 aacaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacatttt 122  Q
    |||| ||||||||||| |||||| |||||| | | |||| || ||||||||||||| |||||| |||||||||||||||||||| ||||||||||| | |    
T  20084470 aacagcagagacaacaacatacaacaacttga-atcataacaacattaataataaccacttga-tggtataacaacattatttt-tatatcatacaatat 20084374  T
Q  123 ccacataaatatatgta 139  Q
     ||||| ||||||||||    
T  20084373 tcacat-aatatatgta 20084358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 273 - 329
Target Start/End: Complemental strand, 21346067 - 21346011
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatact 329  Q
    ||||||||||||||||||| |||||| ||||||||||||||||| | ||||||||||    
T  21346067 caacaaagatattcacgtccaaccaaattagatccatcacaacacatgttaaatact 21346011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 18833855 - 18833914
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||| ||||||||| ||||||||| ||||||||||||| | |||||||||||||||||    
T  18833855 caacaaggatattcacatcaaaccaaattagatccatcaccatataggttaaatactctt 18833914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 332
Target Start/End: Complemental strand, 17437976 - 17437927
Alignment:
Q  283 attcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||| ||||||||| ||||||||||||| |||||||||||||||||||    
T  17437976 attcacatcaaaccaaattagatccatcaccacataggttaaatactctt 17437927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 332
Target Start/End: Original strand, 32949991 - 32950044
Alignment:
Q  279 agatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||| |||||| || |||||||||||||||||| ||||    
T  32949991 agatattcacgtcaaaccaaattagattcaacacaacataggttaaataatctt 32950044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 67 - 130
Target Start/End: Complemental strand, 15635978 - 15635914
Alignment:
Q  67 attaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataa 130  Q
    |||||||||||||||||||||| ||| ||||||  |||||||||||||| ||||||||| |||||    
T  15635978 attaataataacaacttgaatgatataaacaacgatattttctatatcacacattttcctcataa 15635914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 292 - 332
Target Start/End: Complemental strand, 19332223 - 19332183
Alignment:
Q  292 aaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  19332223 aaaccaagttagatccattacaacataggttaaatactctt 19332183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 55 - 130
Target Start/End: Original strand, 20454481 - 20454557
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataa 130  Q
    ||||||||||  |||||||||||||||||||||| ||| ||||||  |||||||||||||| |||||| || |||||    
T  20454481 caacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcacacatttccctcataa 20454557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 292 - 332
Target Start/End: Complemental strand, 45559817 - 45559777
Alignment:
Q  292 aaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  45559817 aaaccaagttagatccattacaacataggttaaatactctt 45559777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 5082880 - 5082821
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||| ||||||||| ||||||||| |||||||||||||  |||| |||||||||||||    
T  5082880 caacaaggatattcacatcaaaccaaattagatccatcaccgcataagttaaatactctt 5082821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 200
Target Start/End: Original strand, 12800500 - 12800543
Alignment:
Q  157 acattaattattaataacatcatataacatcatagttatcaaca 200  Q
    |||||||| |||||||||||||||| ||||||||||||||||||    
T  12800500 acattaatcattaataacatcatatcacatcatagttatcaaca 12800543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 292 - 331
Target Start/End: Complemental strand, 18118813 - 18118774
Alignment:
Q  292 aaaccaagttagatccatcacaacataggttaaatactct 331  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  18118813 aaaccaagttaaatccatcacaacataggttaaatactct 18118774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 121
Target Start/End: Original strand, 20455238 - 20455305
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattt 121  Q
    ||||||||||  |||||||||||||||||||||| ||| ||||||  |||||||||||||| ||||||    
T  20455238 caacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcacacattt 20455305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 121
Target Start/End: Original strand, 20460216 - 20460283
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattt 121  Q
    ||||||||||  |||||||||||||||||||||| ||| ||||||  |||||||||||||| ||||||    
T  20460216 caacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcacacattt 20460283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 332
Target Start/End: Original strand, 21513709 - 21513764
Alignment:
Q  277 aaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||||||| || || |||||||| ||| |||||||||||||    
T  21513709 aaagatattcacgtcaaaccaagataaattcatcacaaaatatgttaaatactctt 21513764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 200
Target Start/End: Complemental strand, 31724345 - 31724302
Alignment:
Q  157 acattaattattaataacatcatataacatcatagttatcaaca 200  Q
    |||||||| ||||||||||||| |||||||||||||||||||||    
T  31724345 acattaatcattaataacatcacataacatcatagttatcaaca 31724302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 42818575 - 42818516
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||| | |||||||||||| ||| |||||||||||||| ||||| ||||||||||||    
T  42818575 caacaaataaattcacgtcaaatcaaattagatccatcacaccatagattaaatactctt 42818516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 200
Target Start/End: Original strand, 23669745 - 23669794
Alignment:
Q  153 aacaacattaattat--taataacatcatataacatcatagttatcaaca 200  Q
    |||||||||||| ||  |||||||||||||||||||||||||||||||||    
T  23669745 aacaacattaatcatcttaataacatcatataacatcatagttatcaaca 23669794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 159
Target Start/End: Complemental strand, 22318765 - 22318662
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 153  Q
    ||||||| || |||||| || ||||||||||||| ||| ||||||| ||||| |||||||||||| | ||||| ||| ||||||||| ||| |||| |||    
T  22318765 caacataacaacattaacaacaacaacttgaatgatatgaacaacaatattt-ctatatcatacaatatccacgtaa-tatatgtatctcaaattatcca 22318668  T
Q  154 acaaca 159  Q
    ||||||    
T  22318667 acaaca 22318662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 39695340 - 39695271
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttc 123  Q
    |||||||||| ||| ||||||||||||||||||| ||| ||||| | || ||| ||||||||||||||||    
T  39695340 caacatagcaacatcaataataacaacttgaatgatataaacaataataatttttatatcatacattttc 39695271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 332
Target Start/End: Complemental strand, 18122388 - 18122348
Alignment:
Q  292 aaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||  ||||||||||||||||    
T  18122388 aaaccaagttagatccatcacaatctaggttaaatactctt 18122348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 19882207 - 19882267
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatca 114  Q
    ||||||||||  |||||||||||||||||||||| ||| ||||||  ||||||||||||||    
T  19882207 caacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatca 19882267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 328
Target Start/End: Original strand, 22313234 - 22313270
Alignment:
Q  292 aaaccaagttagatccatcacaacataggttaaatac 328  Q
    |||||||||||||||||||||||||||||| ||||||    
T  22313234 aaaccaagttagatccatcacaacataggtcaaatac 22313270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 329
Target Start/End: Original strand, 23914308 - 23914364
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatact 329  Q
    |||||||||||||||||||  ||||| |||||||||||| |||| | ||||||||||    
T  23914308 caacaaagatattcacgtccgaccaaattagatccatcataacacatgttaaatact 23914364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 332
Target Start/End: Original strand, 25295536 - 25295576
Alignment:
Q  292 aaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||| |||||| ||||||||||||||||||||||    
T  25295536 aaaccaagttaaatccattacaacataggttaaatactctt 25295576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 332
Target Start/End: Original strand, 25757556 - 25757596
Alignment:
Q  292 aaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||| |||||| ||||||||||||||||||||||    
T  25757556 aaaccaagttaaatccattacaacataggttaaatactctt 25757596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 74 - 149
Target Start/End: Complemental strand, 6102536 - 6102463
Alignment:
Q  74 ataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgtatttcacatta 149  Q
    ||||| ||||| ||||||||||||||||| ||||||||||||||| | | ||||| ||||||||||| ||| ||||    
T  6102536 ataaccacttggatggtataacaacatta-tttctatatcatacaatattcacat-aatatatgtatctcaaatta 6102463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 25849258 - 25849189
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttc 123  Q
    ||||| |||| ||| ||||||||||||||||||| ||| ||||| | || |||| |||||||||||||||    
T  25849258 caacacagcaacatcaataataacaacttgaatgatataaacaataataatttccatatcatacattttc 25849189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 127; Significance: 1e-65; HSPs: 102)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 47 - 193
Target Start/End: Complemental strand, 50348919 - 50348773
Alignment:
Q  47 caacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgtatttcaca 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  50348919 caacttcacaacatagcatcattaataataacaacttgaatggtataacaatattattttctatatcataccttttccacataaatacatgtatttcaca 50348820  T
Q  147 ttaaccaacaacattaattattaataacatcatataacatcatagtt 193  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||    
T  50348819 ttaaccaacaacaataatcattaataacatcatataacatcatagtt 50348773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 40 - 180
Target Start/End: Complemental strand, 14153290 - 14153150
Alignment:
Q  40 catacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 139  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  14153290 catacaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatatcataccttttccacataaatatatgta 14153191  T
Q  140 tttcacattaaccaacaacattaattattaataacatcata 180  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  14153190 tttcacattaaccaacaacattaatcattaataacatcata 14153150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 28 - 139
Target Start/End: Complemental strand, 5206486 - 5206375
Alignment:
Q  28 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 127  Q
    ||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5206486 cagagacaacaacatacaacaatttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 5206387  T
Q  128 taaatatatgta 139  Q
    ||||||||||||    
T  5206386 taaatatatgta 5206375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 24 - 139
Target Start/End: Original strand, 16728499 - 16728614
Alignment:
Q  24 acaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttc 123  Q
    ||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  16728499 acaacagagacaacaacatacaacaacttcacaacatatcatcattaataataacaacttgaatggtataacaacattgttttctatatcatacattttc 16728598  T
Q  124 cacataaatatatgta 139  Q
    ||||||||||||||||    
T  16728599 cacataaatatatgta 16728614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 28 - 139
Target Start/End: Complemental strand, 41173203 - 41173092
Alignment:
Q  28 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 127  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  41173203 cagagacaacaacatacaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatatcatacattttccaca 41173104  T
Q  128 taaatatatgta 139  Q
    ||||||||||||    
T  41173103 taaatatatgta 41173092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 28 - 139
Target Start/End: Complemental strand, 35065412 - 35065301
Alignment:
Q  28 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 127  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  35065412 cagagacaacaacatacaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatatcatactttttccaca 35065313  T
Q  128 taaatatatgta 139  Q
    ||||||||||||    
T  35065312 taaatatatgta 35065301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 31 - 139
Target Start/End: Original strand, 17693291 - 17693399
Alignment:
Q  31 agacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataa 130  Q
    ||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  17693291 agacatcaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtatatcaacattattttctatatcatacattttccacataa 17693390  T
Q  131 atatatgta 139  Q
    |||||||||    
T  17693391 atatatgta 17693399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 24 - 139
Target Start/End: Original strand, 35353815 - 35353930
Alignment:
Q  24 acaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttc 123  Q
    ||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||| |||||||||||    
T  35353815 acaacagagacaacaacatacaacaacttcacaacatagcataattaataataacaacttaaaaggtataacaacattattttctataacatacattttc 35353914  T
Q  124 cacataaatatatgta 139  Q
    ||||||||||||||||    
T  35353915 cacataaatatatgta 35353930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 40 - 139
Target Start/End: Original strand, 44273706 - 44273805
Alignment:
Q  40 catacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 139  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44273706 catacaacaactccacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 44273805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 31 - 161
Target Start/End: Original strand, 14508074 - 14508204
Alignment:
Q  31 agacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataa 130  Q
    |||||| | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  14508074 agacaaaaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatataataccttttccacataa 14508173  T
Q  131 atatatgtatttcacattaaccaacaacatt 161  Q
    |||||||||  ||| ||||  ||||||||||    
T  14508174 atatatgtaactcaaattattcaacaacatt 14508204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 29 - 139
Target Start/End: Complemental strand, 15932338 - 15932228
Alignment:
Q  29 agagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacat 128  Q
    ||||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15932338 agagacagcagcatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacaatttccacat 15932239  T
Q  129 aaatatatgta 139  Q
    ||| |||||||    
T  15932238 aaacatatgta 15932228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 47 - 139
Target Start/End: Original strand, 11258706 - 11258798
Alignment:
Q  47 caacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 139  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11258706 caacttcacaacataacatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 11258798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 23 - 139
Target Start/End: Complemental strand, 45531458 - 45531342
Alignment:
Q  23 aacaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacatttt 122  Q
    |||| ||||||||| | |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  45531458 aacagcagagacaataacatacaacaacttcacaacataacatcattaataataacaacttgaatggtataacaacattatcttttatatcatacatttt 45531359  T
Q  123 ccacataaatatatgta 139  Q
    |||||||||||||||||    
T  45531358 ccacataaatatatgta 45531342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 24 - 139
Target Start/End: Complemental strand, 19884359 - 19884244
Alignment:
Q  24 acaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttc 123  Q
    |||||||||||| || |||||| ||||| || |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  19884359 acaacagagacatcaacatacaacaactccataacataacatcattaataataacaacttgaatggtataaaaacattattttctatatcatacattttc 19884260  T
Q  124 cacataaatatatgta 139  Q
    ||||||||||||||||    
T  19884259 cacataaatatatgta 19884244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 51 - 139
Target Start/End: Complemental strand, 22307392 - 22307304
Alignment:
Q  51 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 139  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  22307392 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcataccttttccacataaatatatgta 22307304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 51 - 139
Target Start/End: Original strand, 40807239 - 40807327
Alignment:
Q  51 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 139  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40807239 ttcacaacatagcatcattaataataataactttaatggtataacaacattattttctatatcatacattttccacataaatatatgta 40807327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 28 - 139
Target Start/End: Complemental strand, 17519705 - 17519594
Alignment:
Q  28 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 127  Q
    |||||||| || |||||| ||||||||||| ||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||    
T  17519705 cagagacagcaacatacaacaacttcacaatataacatcattaataataacaacttgaatggtatgaccacattattttctatatcatacatttttcaca 17519606  T
Q  128 taaatatatgta 139  Q
    ||||||||||||    
T  17519605 taaatatatgta 17519594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 28 - 139
Target Start/End: Complemental strand, 17534567 - 17534456
Alignment:
Q  28 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 127  Q
    |||||||| || |||||| ||||||||||| ||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||    
T  17534567 cagagacagcaacatacaacaacttcacaatataacatcattaataataacaacttgaatggtatgaccacattattttctatatcatacatttttcaca 17534468  T
Q  128 taaatatatgta 139  Q
    ||||||||||||    
T  17534467 taaatatatgta 17534456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 47 - 139
Target Start/End: Complemental strand, 2842275 - 2842183
Alignment:
Q  47 caacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 139  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  2842275 caacttcacaacatagcatcattaataataaaaacttgaatgatataacaacattattttctatatcataccttttccacataaatatgtgta 2842183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 51 - 139
Target Start/End: Original strand, 17538350 - 17538438
Alignment:
Q  51 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 139  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  17538350 ttcacaacatagcttcattaataataacaactttaatggtataacaacattattttctatatcataccttttccacataaatatatgta 17538438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 6156090 - 6156149
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6156090 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 6156149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 14153067 - 14153008
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14153067 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 14153008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 24546221 - 24546280
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24546221 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 24546280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 50756049 - 50755990
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50756049 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 50755990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 5215085 - 5215159
Alignment:
Q  28 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacatta 102  Q
    ||||||||||| |||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  5215085 cagagacaacaacatacaacaatttcacaacatagcatcataaataataacaacttgaatggtataacaacatta 5215159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 2842130 - 2842071
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2842130 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactctt 2842071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 9511833 - 9511774
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  9511833 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactctt 9511774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 9519808 - 9519749
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  9519808 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactctt 9519749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 14508232 - 14508291
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14508232 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactctt 14508291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 17046546 - 17046605
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  17046546 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactctt 17046605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 17207726 - 17207785
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  17207726 caacaaagatattcacgtcaaaccaagttagatccatcaaaacataggttaaatactctt 17207785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 17538491 - 17538550
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  17538491 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactctt 17538550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 17693452 - 17693511
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  17693452 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactctt 17693511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 22 - 164
Target Start/End: Original strand, 20417289 - 20417429
Alignment:
Q  22 caacaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacatt 120  Q
    ||||| ||||||||||| |||| || |||||  ||||||| ||  |||||||||||||||||||||| ||||| ||||| ||| || |||||||||||||    
T  20417289 caacagcagagacaacaacataaac-aacttg-caacatatcaatattaataataacaacttgaatgatataaacaacaatatcttttatatcatacatt 20417386  T
Q  121 ttccacataaatatatgtatttcacattaaccaacaacattaat 164  Q
    |||||||| ||||||||||  ||| |||||||||||||||||||    
T  20417387 ttccacat-aatatatgtagctcaaattaaccaacaacattaat 20417429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 35065248 - 35065189
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  35065248 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactctt 35065189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 40807380 - 40807439
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  40807380 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactctt 40807439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 44273858 - 44273917
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  44273858 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactctt 44273917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 50348694 - 50348635
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  50348694 caacaaagatattcacgtcaaaccaagttagatccatcaaaacataggttaaatactctt 50348635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 54876151 - 54876092
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  54876151 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactctt 54876092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 11192465 - 11192524
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  11192465 caacaaagatattcacgtcaaaccaaattaggtccatcacaacataggttaaatactctt 11192524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 13519667 - 13519725
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  13519667 caacaaagatattcacgtcaaaccaa-ttagatccatcacaacataggttaaatactctt 13519725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 15565898 - 15565957
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  15565898 caacaaagatatttacgtcaaaccaagttagatccaacacaacataggttaaatactctt 15565957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 17519541 - 17519482
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  17519541 caacaaagatattcacgtcaaaccaaattagatccatcacaacatatgttaaatactctt 17519482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 17534403 - 17534344
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  17534403 caacaaagatattcacgtcaaaccaaattagatccatcacaacatatgttaaatactctt 17534344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 22307251 - 22307192
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  22307251 caacaaagatattcacgtcaaaccaaattagatccatcacaacataagttaaatactctt 22307192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 35353983 - 35354042
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  35353983 caacaaagatattcacgtcaaactaaattagatccatcacaacataggttaaatactctt 35354042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 41173039 - 41172980
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  41173039 caacaaagatattcacgtcaaaccaaattacatccatcacaacataggttaaatactctt 41172980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 71 - 164
Target Start/End: Original strand, 13179399 - 13179492
Alignment:
Q  71 ataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaacattaat 164  Q
    |||||||||||||||||| ||| ||||||| |||||||||||||||||||||| ||||| ||||||||||  ||| |||||||||||||| ||||    
T  13179399 ataataacaacttgaatgatatgaacaacaatattttctatatcatacatttttcacat-aatatatgtagctcaaattaaccaacaacaataat 13179492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 167
Target Start/End: Original strand, 10550510 - 10550622
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 153  Q
    ||||||||||  |||||||||||||||||||||| ||| ||||||  || |||||||||||||||||||||||||||| |||| ||  | | ||||||||    
T  10550510 caacatagcaatattaataataacaacttgaatgatataaacaacgataatttctatatcatacattttccacataaa-atatatagcttaaattaacca 10550608  T
Q  154 acaacattaattat 167  Q
    ||||||| ||||||    
T  10550609 acaacatcaattat 10550622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 67 - 167
Target Start/End: Original strand, 14818278 - 14818378
Alignment:
Q  67 attaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaacattaatt 165  Q
    |||||||||||||||||||||| ||||| ||||  |||||||||||||||||||||||||||| ||||||| ||  | | ||||||||||||||| ||||    
T  14818278 attaataataacaacttgaatgatataaacaacgatattttctatatcatacattttccacat-aatatatatagcttaaattaaccaacaacatcaatt 14818376  T
Q  166 at 167  Q
    ||    
T  14818377 at 14818378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 71 - 164
Target Start/End: Original strand, 16059489 - 16059580
Alignment:
Q  71 ataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaacattaat 164  Q
    ||||||| |||||||||| | ||||||||| |||| |||||||||||| ||||||||||| ||||||||||||| | |||||||||||||||||    
T  16059489 ataataataacttgaatgatttaacaacatcattt-ctatatcatacactttccacataa-tatatgtatttcaaaataaccaacaacattaat 16059580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 55 - 130
Target Start/End: Complemental strand, 3394812 - 3394736
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataa 130  Q
    ||||||||||  |||||||||||||||||||||| ||||| ||||  ||||||||||||||||||||||||||||||    
T  3394812 caacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcatacattttccacataa 3394736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 28 - 123
Target Start/End: Original strand, 10562923 - 10563019
Alignment:
Q  28 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttc 123  Q
    |||||| |||| |||||| ||||||||||||||||||||||||| |||||||||||||| | ||| ||||| | || ||| ||||||||||||||||    
T  10562923 cagagataacaacatacaacaacttcacaacatagcatcattaaaaataacaacttgaacgatataaacaataataatttttatatcatacattttc 10563019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 54330970 - 54330914
Alignment:
Q  276 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  54330970 caaagatattcacgtcaaatcaagttagattcatcacaacataggttaaatactctt 54330914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 5206322 - 5206263
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||    
T  5206322 caacaaagatattcacgtcaaaccaaattagattcatcacaacataggttaaataatctt 5206263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 11258851 - 11258910
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||    
T  11258851 caacaaagatattcacgtcaaaccaaattatatctatcacaacataggttaaatactctt 11258910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 15932175 - 15932116
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| | ||||||||||    
T  15932175 caacaaagatattcacgtcaaaccaaattagatccatcacaacatagatgaaatactctt 15932116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 17685511 - 17685452
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||    
T  17685511 caacaaagatattcacgtcaaaccaaattagatccatcacaagatagattaaatactctt 17685452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 283 - 332
Target Start/End: Original strand, 14441562 - 14441611
Alignment:
Q  283 attcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14441562 attcacgtcaaaccaaattagatccatcacaacataggttaaatactctt 14441611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 71 - 164
Target Start/End: Original strand, 16044629 - 16044720
Alignment:
Q  71 ataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaacattaat 164  Q
    ||||||| |||||||||| | ||||||||| |||| |||||||||||| ||||| ||||| ||||||||||||| | |||||||||||||||||    
T  16044629 ataataataacttgaatgatttaacaacatcattt-ctatatcatacactttccgcataa-tatatgtatttcaaaataaccaacaacattaat 16044720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 273 - 329
Target Start/End: Complemental strand, 10542126 - 10542070
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatact 329  Q
    ||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||    
T  10542126 caacaaagatattcacgtccaaccaagttagatccatcacaacacatgttaaatact 10542070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 130
Target Start/End: Complemental strand, 13523221 - 13523145
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataa 130  Q
    ||||||||||  |||||||||||||||||||||| ||| ||||||  |||||||||||||||||||||||| |||||    
T  13523221 caacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcatacattttcctcataa 13523145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 19569037 - 19568977
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagtta-gatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||    
T  19569037 caacaaagatattcacgtcaaaccaaattaaggtccatcacaacataggttaaatactctt 19568977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 139
Target Start/End: Complemental strand, 23395857 - 23395786
Alignment:
Q  68 ttaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgta 139  Q
    ||||||||||||||| ||||| ||||| ||||| |||||||||||||||||||||||||||| ||||||||||    
T  23395857 ttaataataacaactcgaatgatataaacaacaatattttctatatcatacattttccacat-aatatatgta 23395786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 50351665 - 50351609
Alignment:
Q  276 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||    
T  50351665 caaagatattcacgtcaaaccaaattagatccataacaacatatgttaaatactctt 50351609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 277 - 332
Target Start/End: Complemental strand, 14568723 - 14568668
Alignment:
Q  277 aaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||    
T  14568723 aaagatattcacgtcaaaccaagatagattcatcacaacataggttagatactctt 14568668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 18700141 - 18700082
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||| |||||| ||||||||||||||||| | |||||||||||||    
T  18700141 caacaaagatattcacgtccaaccaaattagatccatcacaacacatgttaaatactctt 18700082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 42353341 - 42353283
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||    
T  42353341 caacaaagatattcacgtcaaaccca-ttagatccatcacaacatacgttaaatactctt 42353283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 17691473 - 17691427
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacatag 319  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||    
T  17691473 caacaaagatattcacgtcaaaccaaattagatccatcacaacatag 17691427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 22 - 130
Target Start/End: Complemental strand, 13520622 - 13520515
Alignment:
Q  22 caacaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacatt 120  Q
    ||||| ||||||||||| |||| | ||||||  ||||||||||  |||||||||||||| ||||||| ||||| ||||  ||||||||||||||||||||    
T  13520622 caacagcagagacaacaacata-agcaacttg-caacatagcaatattaataataacaatttgaatgatataaacaacgatattttctatatcatacatt 13520525  T
Q  121 ttccacataa 130  Q
    |||| |||||    
T  13520524 ttcctcataa 13520515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 55 - 167
Target Start/End: Complemental strand, 17548361 - 17548249
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 153  Q
    ||||||||||  |||||||| ||||||||||||| ||||| ||||  | |||||||||||||||||||||||||||| ||||| ||  |   ||||||||    
T  17548361 caacatagcaatattaataacaacaacttgaatgatataaacaacgattttttctatatcatacattttccacataa-tatatatagcttgaattaacca 17548263  T
Q  154 acaacattaattat 167  Q
    ||||||| ||||||    
T  17548262 acaacatcaattat 17548249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 55 - 167
Target Start/End: Complemental strand, 52338775 - 52338663
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtataac-aacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 153  Q
    ||||||||||  |||||||| ||||||||||||| |||||  |||   ||||||||||||||||||||||||||| ||||||| ||  | | ||||||||    
T  52338775 caacatagcaatattaataacaacaacttgaatgatataaataacgacattttctatatcatacattttccacat-aatatatatagcttaaattaacca 52338677  T
Q  154 acaacattaattat 167  Q
    ||||||| ||||||    
T  52338676 acaacatcaattat 52338663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 71 - 130
Target Start/End: Original strand, 6819367 - 6819427
Alignment:
Q  71 ataataacaacttgaatggta-taacaacattattttctatatcatacattttccacataa 130  Q
    |||||||||||||||||| || |||||||  ||||||||||||||||||||||||||||||    
T  6819367 ataataacaacttgaatgataataacaacgatattttctatatcatacattttccacataa 6819427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 130
Target Start/End: Complemental strand, 18367556 - 18367492
Alignment:
Q  67 attaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataa 130  Q
    |||||||||||||||||||||| ||||| ||||  ||||||| ||||||||||||||||||||||    
T  18367556 attaataataacaacttgaatgatataaacaacgatattttcaatatcatacattttccacataa 18367492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 200
Target Start/End: Original strand, 33564372 - 33564416
Alignment:
Q  156 aacattaattattaataacatcatataacatcatagttatcaaca 200  Q
    ||||||||| |||||||||||||||||||||||||||||||||||    
T  33564372 aacattaatcattaataacatcatataacatcatagttatcaaca 33564416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 12470186 - 12470245
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||| |||||| ||||||| ||||||||| | |||||||||||||    
T  12470186 caacaaagatattcacgtccaaccaaattagatcaatcacaacacatgttaaatactctt 12470245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 12511232 - 12511291
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||| |||||||| |||||| ||||||||||||||||| | |||||||||||||    
T  12511232 caacaaagatcttcacgtccaaccaaattagatccatcacaacacatgttaaatactctt 12511291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 40812217 - 40812276
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||| ||||||||| ||||||||| |||||| |||||| |||||||||||||||||||    
T  40812217 caacaaggatattcacatcaaaccaaattagatacatcaccacataggttaaatactctt 40812276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 159
Target Start/End: Complemental strand, 42353463 - 42353374
Alignment:
Q  68 ttaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaaca 159  Q
    ||||||||||| ||||| ||||||||||||||||| ||||||||||||||| | | ||||| ||||||||||| ||| ||||  ||||||||    
T  42353463 ttaataataaccacttggatggtataacaacatta-tttctatatcatacaatattcacat-aatatatgtatctcaaattattcaacaaca 42353374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 43889467 - 43889408
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||| |||||| |||||||||| |||||| | |||||||||||||    
T  43889467 caacaaagatattcacgtccaaccaaattagatccatgacaacacatgttaaatactctt 43889408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 49900112 - 49900171
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||| ||||||| | ||||||||| ||||||||||||| |||||||||||||||||||    
T  49900112 caacaaggatattcgcatcaaaccaaattagatccatcaccacataggttaaatactctt 49900171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 123
Target Start/End: Original strand, 6158637 - 6158706
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttc 123  Q
    |||||||||| ||| ||||||||||||||||||| ||| ||||| | || ||||||||||||||||||||    
T  6158637 caacatagcaacatcaataataacaacttgaatgatataaacaataataatttctatatcatacattttc 6158706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 14642362 - 14642293
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttc 123  Q
    |||||||||| ||| ||||||||||||||||||| ||| ||||| | || ||||||||||||||||||||    
T  14642362 caacatagcaacatcaataataacaacttgaatgatataaacaataataatttctatatcatacattttc 14642293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 16050114 - 16050189
Alignment:
Q  79 aacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaaca 156  Q
    |||||||||| ||||||||||| |||| |||||||||||| ||||||||| ||||||||||| ||| | |||||||||    
T  16050114 aacttgaatgatataacaacatcattt-ctatatcatacactttccacat-aatatatgtatatcaaaataaccaaca 16050189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 55 - 130
Target Start/End: Complemental strand, 179517 - 179441
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggta-taacaacattattttctatatcatacattttccacataa 130  Q
    ||||||||||  ||||||| |||||||||||||| || |||||||  |||||||||||||| ||||||| |||||||    
T  179517 caacatagcaatattaatagtaacaacttgaatgataataacaacgatattttctatatcaaacattttgcacataa 179441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 273 - 329
Target Start/End: Original strand, 14671208 - 14671264
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatact 329  Q
    |||||||||||||||||||  ||||| ||||||||||||||||| | ||||||||||    
T  14671208 caacaaagatattcacgtccgaccaaattagatccatcacaacacatgttaaatact 14671264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 273 - 329
Target Start/End: Original strand, 14682707 - 14682763
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatact 329  Q
    |||||||||||||||||||  ||||| ||||||||||||||||| | ||||||||||    
T  14682707 caacaaagatattcacgtccgaccaaattagatccatcacaacacatgttaaatact 14682763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 167
Target Start/End: Complemental strand, 52213272 - 52213175
Alignment:
Q  70 aataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaacattaattat 167  Q
    ||||||||||| ||||||| ||||| ||||  |||||||||||| ||||||||||||||||| |||||  |  | | ||||||||||||||| ||||||    
T  52213272 aataataacaatttgaatgatataaacaacgatattttctatataatacattttccacataa-tatatacaacttaaattaaccaacaacataaattat 52213175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 295 - 332
Target Start/End: Original strand, 12952448 - 12952485
Alignment:
Q  295 ccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||| |||||||||||||||||||||||||    
T  12952448 ccaagttagatctatcacaacataggttaaatactctt 12952485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 14250927 - 14250861
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttc 123  Q
    |||||||||| ||| ||||||||||||||||||  |||||||| | || |||| |||||||||||||||    
T  14250927 caacatagcaacatcaataataacaacttgaat--tataacaataataatttccatatcatacattttc 14250861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 159 - 200
Target Start/End: Complemental strand, 16180522 - 16180481
Alignment:
Q  159 attaattattaataacatcatataacatcatagttatcaaca 200  Q
    |||||| ||||||||||||| |||||||||||||||||||||    
T  16180522 attaatcattaataacatcacataacatcatagttatcaaca 16180481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 123
Target Start/End: Original strand, 37038058 - 37038127
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttc 123  Q
    |||||||||| ||| ||||||||||| ||||||| ||| ||||| | || ||||||||||||||||||||    
T  37038058 caacatagcaacatcaataataacaatttgaatgatataaacaataataatttctatatcatacattttc 37038127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 42325033 - 42324964
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttc 123  Q
    |||||||||| ||| ||||||||||||||||||| ||| ||||| | || |||| |||||||||||||||    
T  42325033 caacatagcaacatgaataataacaacttgaatgatataaacaataataatttccatatcatacattttc 42324964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 332
Target Start/End: Original strand, 43928741 - 43928794
Alignment:
Q  279 agatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||| | |||| ||||| |||||| |||||||||||||    
T  43928741 agatattcacgtcaaaccaaataagattcatcagaacatatgttaaatactctt 43928794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 332
Target Start/End: Complemental strand, 25104850 - 25104810
Alignment:
Q  292 aaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||| ||||||||| |||||||||||||    
T  25104850 aaaccaagttagatccaccacaacataagttaaatactctt 25104810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 157 - 200
Target Start/End: Original strand, 11191416 - 11191459
Alignment:
Q  157 acattaattattaataacatcatataacatcatagttatcaaca 200  Q
    |||||||| ||||||||||||| |||||||||||||||| ||||    
T  11191416 acattaatcattaataacatcacataacatcatagttattaaca 11191459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 157 - 200
Target Start/End: Original strand, 11561995 - 11562038
Alignment:
Q  157 acattaattattaataacatcatataacatcatagttatcaaca 200  Q
    |||||||| ||||||||||||| |||||||||||||||| ||||    
T  11561995 acattaatcattaataacatcacataacatcatagttattaaca 11562038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 200
Target Start/End: Original strand, 14519583 - 14519625
Alignment:
Q  158 cattaattattaataacatcatataacatcatagttatcaaca 200  Q
    |||||||||| || ||||||||||||||||||| |||||||||    
T  14519583 cattaattatgaacaacatcatataacatcatatttatcaaca 14519625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 156
Target Start/End: Original strand, 54520771 - 54520812
Alignment:
Q  114 atacattttccacataaatatatgtatttcacattaaccaaca 156  Q
    ||||||||||||||||| ||||| |||||||||||||||||||    
T  54520771 atacattttccacataa-tatatatatttcacattaaccaaca 54520812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 117
Target Start/End: Original strand, 13519549 - 13519593
Alignment:
Q  72 taataacaacttgaatggtataacaacattattttctatatcatac 117  Q
    ||||||| ||||| ||||||||||||||||| ||||||||||||||    
T  13519549 taataaccacttggatggtataacaacatta-tttctatatcatac 13519593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 332
Target Start/End: Original strand, 17937931 - 17937971
Alignment:
Q  292 aaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||| ||||||||| |||||| ||||||||||||||||    
T  17937931 aaaccaaattagatccaacacaacctaggttaaatactctt 17937971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 332
Target Start/End: Original strand, 18739300 - 18739340
Alignment:
Q  292 aaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||| |||||  ||||||||||||||||    
T  18739300 aaaccaagttagatccaacacaatctaggttaaatactctt 18739340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 102; Significance: 1e-50; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 28 - 157
Target Start/End: Original strand, 19675971 - 19676100
Alignment:
Q  28 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 127  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||    
T  19675971 cagagacaacaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaaaattattttctatatcataccttttgcaca 19676070  T
Q  128 taaatatatgtatttcacattaaccaacaa 157  Q
    ||||||||||||||||| |||| |||||||    
T  19676071 taaatatatgtatttcaaattatccaacaa 19676100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 31 - 139
Target Start/End: Original strand, 42912273 - 42912381
Alignment:
Q  31 agacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataa 130  Q
    ||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42912273 agacagcaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataa 42912372  T
Q  131 atatatgta 139  Q
    |||||||||    
T  42912373 atatatgta 42912381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 40 - 139
Target Start/End: Complemental strand, 16059134 - 16059035
Alignment:
Q  40 catacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 139  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  16059134 catacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcataccttttccacataaatatatgta 16059035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 28 - 139
Target Start/End: Complemental strand, 4596677 - 4596566
Alignment:
Q  28 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 127  Q
    ||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  4596677 cagagacaacaacatacaacaatttcacaacatagcatcattaataataacaacttgaatggtataacaacattagtttctatatcataccttttccaca 4596578  T
Q  128 taaatatatgta 139  Q
    ||||||||||||    
T  4596577 taaatatatgta 4596566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 28 - 139
Target Start/End: Original strand, 20587898 - 20588009
Alignment:
Q  28 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 127  Q
    |||||||| || |||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  20587898 cagagacagcaacatacaacaacttcacaacatagtatcattaataataacaacttgaatgatataacaacattattttctatatcatacattttccaca 20587997  T
Q  128 taaatatatgta 139  Q
    ||||||||||||    
T  20587998 taaatatatgta 20588009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 28 - 139
Target Start/End: Original strand, 20592436 - 20592547
Alignment:
Q  28 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 127  Q
    |||||||| || |||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  20592436 cagagacagcaacatacaacaacttcacaacatagtatcattaataataacaacttgaatgatataacaacattattttctatatcatacattttccaca 20592535  T
Q  128 taaatatatgta 139  Q
    ||||||||||||    
T  20592536 taaatatatgta 20592547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 29 - 139
Target Start/End: Complemental strand, 21046880 - 21046770
Alignment:
Q  29 agagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacat 128  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  21046880 agagacaacaacatacaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatatcataccttttccacat 21046781  T
Q  129 aaatatatgta 139  Q
    | |||||||||    
T  21046780 agatatatgta 21046770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 28 - 139
Target Start/End: Complemental strand, 20634467 - 20634356
Alignment:
Q  28 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 127  Q
    |||||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||    
T  20634467 cagagacagcaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttttatatcatgccttttccaca 20634368  T
Q  128 taaatatatgta 139  Q
    ||||||||||||    
T  20634367 taaatatatgta 20634356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 54 - 180
Target Start/End: Original strand, 1642681 - 1642805
Alignment:
Q  54 acaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 153  Q
    ||||||||||| ||| || ||||||| |||||||| |||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||| |    
T  1642681 acaacatagcagcatcaacaataacatcttgaatgatataacaacattattttctataacatacatttt-cacat-aatatatgtatttcacattaacta 1642778  T
Q  154 acaacattaattattaataacatcata 180  Q
    ||||||||||| |||||||||||||||    
T  1642779 acaacattaatcattaataacatcata 1642805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 51 - 139
Target Start/End: Complemental strand, 41227513 - 41227425
Alignment:
Q  51 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 139  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||    
T  41227513 ttcacaacatagcatcattaatgataacaaattgaatggtataacaacattattttctatatcataccttttccacataattgtatgta 41227425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 164
Target Start/End: Original strand, 42696931 - 42697070
Alignment:
Q  22 caacaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattt 121  Q
    ||||| ||||||||||| |||| | ||||||  |||| ||||| ||||||||| |||| |||| ||| |||||||||||||||||||||||||||| |||    
T  42696931 caacagcagagacaacaacataaaacaacttg-caacgtagcaacattaataacaacatcttggatgatataacaacattattttctatatcataccttt 42697029  T
Q  122 tccacataaatatatgtatttcacattaaccaacaacattaat 164  Q
    | ||||| ||||||||||||||||||||| ||| |||||||||    
T  42697030 t-cacat-aatatatgtatttcacattaatcaagaacattaat 42697070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 55 - 167
Target Start/End: Original strand, 18275157 - 18275269
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 153  Q
    |||||||||| | ||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||| ||||||||||  |   ||||||||    
T  18275157 caacatagcaacgttaataataacaacttgaatgatataaacaacaatattttctatatcatacattttccacat-aatatatgtagcttgaattaacca 18275255  T
Q  154 acaacattaattat 167  Q
    ||||||| ||||||    
T  18275256 acaacatcaattat 18275269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 55 - 167
Target Start/End: Original strand, 52983387 - 52983499
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 153  Q
    ||||||| || ||||||||||||||||||||||| ||||| ||||  |||||||||||||||||||||||||||| ||||||||||  | | ||||||||    
T  52983387 caacataacaacattaataataacaacttgaatgatataaacaacgatattttctatatcatacattttccacat-aatatatgtagcttaaattaacca 52983485  T
Q  154 acaacattaattat 167  Q
    ||||||| ||||||    
T  52983486 acaacatcaattat 52983499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 4596513 - 4596454
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  4596513 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactctt 4596454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 20588063 - 20588122
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  20588063 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactctt 20588122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 20592601 - 20592660
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  20592601 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactctt 20592660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 20634303 - 20634244
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  20634303 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactctt 20634244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 39060480 - 39060539
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  39060480 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactctt 39060539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 164
Target Start/End: Original strand, 51476218 - 51476327
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 153  Q
    |||||||||| ||||||||||||||||||||||  ||| ||||||  |||| ||||||||||||||||||||||| ||||||||||  | | ||||||||    
T  51476218 caacatagcaacattaataataacaacttgaataatataaacaacggtattatctatatcatacattttccacat-aatatatgtagcttaaattaacca 51476316  T
Q  154 acaacattaat 164  Q
    |||||||||||    
T  51476317 acaacattaat 51476327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 41226116 - 41226060
Alignment:
Q  276 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  41226116 caaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactctt 41226060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 41227369 - 41227313
Alignment:
Q  276 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  41227369 caaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactctt 41227313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 50544239 - 50544295
Alignment:
Q  276 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50544239 caaatatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 50544295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 1642980 - 1643039
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  1642980 caacaaagatattcacgtcaaatcaagttagatccatcaaaacataggttaaatactctt 1643039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 7052723 - 7052665
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  7052723 caacaaagatattcacgtcaaaccaa-ttagatccatcacaacataggttaaatactctt 7052665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 22824074 - 22824015
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  22824074 caacaaagatattcacgtcaaactaagttagatccatcacaacataggttaaataatctt 22824015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 279 - 332
Target Start/End: Original strand, 12710278 - 12710331
Alignment:
Q  279 agatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  12710278 agatattcacgtcaaaccaaattagatccatcacaacataggttaaatactctt 12710331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 23 - 159
Target Start/End: Complemental strand, 14238446 - 14238313
Alignment:
Q  23 aacaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacatttt 122  Q
    ||||||||||||| || |||||| |||||| | | |||| || ||||||||||||| ||||| ||||||||||||||||| ||||||||||||||| | |    
T  14238446 aacaacagagacagcaacatacaacaacttga-atcataacaacattaataataaccacttggatggtataacaacatta-tttctatatcatacaatat 14238349  T
Q  123 ccacataaatatatgtatttcacattaaccaacaaca 159  Q
     ||||| ||||||||||| ||| ||||  ||||||||    
T  14238348 tcacat-aatatatgtatctcaaattattcaacaaca 14238313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 16058982 - 16058923
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||    
T  16058982 caacaaagatattcacgtcaaaccaaattagatccatcacaacatagcttaaataatctt 16058923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 277 - 332
Target Start/End: Original strand, 18120993 - 18121048
Alignment:
Q  277 aaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  18120993 aaagatattcacgtcaaaccaagatagattcatcacaacataggttaaatactctt 18121048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 19676095 - 19676154
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||    
T  19676095 caacaaagatattcacgtcaaaccaaattagatccatcacaacatatattaaatactctt 19676154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 38887755 - 38887697
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  38887755 caacaaagatatccacgtcaaaccaa-ttagatccatcacaacataggttaaatactctt 38887697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 45496329 - 45496388
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||    
T  45496329 caacaaagatattcatgtcaaaccaagttagattaatcacaacataggttaaatactctt 45496388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 51082600 - 51082659
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||    
T  51082600 caacaaagatattcacgtcaaaccaaattagattcatcacaacataggttagatactctt 51082659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 51323659 - 51323718
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||    
T  51323659 caacaaagatattcatgtcaaaccaaattagatccatcacaacatatgttaaatactctt 51323718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 273 - 325
Target Start/End: Complemental strand, 21239963 - 21239911
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaa 325  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  21239963 caacaaaaatattcacgtcaaaccaaattagatccatcacaacataggttaaa 21239911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 14238280 - 14238221
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||||||| || |||||| ||||||||||||||||| ||||||||    
T  14238280 caacaaagatattcacgtcaaacaaaattagattcatcacaacataggttagatactctt 14238221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 277 - 332
Target Start/End: Complemental strand, 24720357 - 24720302
Alignment:
Q  277 aaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||    
T  24720357 aaagatattcacgtcaaaccaagatagattcatcgcaacataggttaaatactctt 24720302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 42912434 - 42912493
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||  ||||||||||||    
T  42912434 caacaaagatattcacgtcaaaccaaattagatcaatcacaacatatattaaatactctt 42912493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 167
Target Start/End: Original strand, 18270518 - 18270615
Alignment:
Q  70 aataataacaacttgaatggtataacaa-cattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaacattaattat 167  Q
    ||||||||||||| ||||| ||||| || || |||||||||||||||||||||||||||| ||||||||||  |   ||||||||||||||| ||||||    
T  18270518 aataataacaactagaatgatataaaaaacaatattttctatatcatacattttccacat-aatatatgtagcttgaattaaccaacaacatcaattat 18270615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 274 - 328
Target Start/End: Complemental strand, 21046716 - 21046662
Alignment:
Q  274 aacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatac 328  Q
    ||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||    
T  21046716 aacaaagatattcacatcaaaccaaattatatccatcacaacataggttaaatac 21046662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 58 - 159
Target Start/End: Complemental strand, 7052855 - 7052756
Alignment:
Q  58 catagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaa 157  Q
    ||||||| ||||||||||||| ||||| ||||||||||||||||| ||||||||||||||| | | ||| | ||||||||||| ||| ||||  ||||||    
T  7052855 catagcaacattaataataaccacttggatggtataacaacatta-tttctatatcatacaatattcacct-aatatatgtatctcaaattattcaacaa 7052758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 55 - 167
Target Start/End: Complemental strand, 13528604 - 13528492
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 153  Q
    ||||||||||  |||||||| ||||||||||||| ||||| ||||   ||||||||||||||||||||||||||||| ||||| ||  |   ||||||||    
T  13528604 caacatagcaatattaataacaacaacttgaatgatataaacaacgacattttctatatcatacattttccacataa-tatatatagcttgaattaacca 13528506  T
Q  154 acaacattaattat 167  Q
    ||||||| ||||||    
T  13528505 acaacatcaattat 13528492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 58 - 139
Target Start/End: Complemental strand, 38887927 - 38887848
Alignment:
Q  58 catagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 139  Q
    ||||||| ||||||||||||| ||||| ||||||||||||||||| ||||||||||||||| | | ||||| ||||||||||    
T  38887927 catagcaacattaataataaccacttggatggtataacaacatta-tttctatatcatacaatattcacat-aatatatgta 38887848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 6833602 - 6833658
Alignment:
Q  276 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||| |||||||| |||||||||||||||| ||||||||||||||||| ||||||||    
T  6833602 caaatatattcacatcaaaccaagttagattcatcacaacataggttatatactctt 6833658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 130
Target Start/End: Complemental strand, 7792662 - 7792586
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtata-acaacattattttctatatcatacattttccacataa 130  Q
    ||||||||||  |||||||||||||||||||||| |||  |||||  |||||||||||||||||||||||| |||||    
T  7792662 caacatagcaatattaataataacaacttgaatgatatttacaacgatattttctatatcatacattttcctcataa 7792586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 273 - 325
Target Start/End: Complemental strand, 11809251 - 11809199
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaa 325  Q
    |||||| |||||||||||||| ||||||||||| |||||||||||||||||||    
T  11809251 caacaatgatattcacgtcaacccaagttagattcatcacaacataggttaaa 11809199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 130
Target Start/End: Complemental strand, 44822919 - 44822855
Alignment:
Q  67 attaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataa 130  Q
    |||||||||||||||||||||| ||||| ||||  |||||||||||||||||||||||| |||||    
T  44822919 attaataataacaacttgaatgatataaacaacgatattttctatatcatacattttcctcataa 44822855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 332
Target Start/End: Complemental strand, 28477428 - 28477377
Alignment:
Q  281 atattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||| ||||    
T  28477428 atattcatgtcaaaccaagttagatccatcacaacataggtaaaatattctt 28477377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 48301316 - 48301375
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||| ||||||||| ||||||||| ||||||| ||||| |||||||||||||||||||    
T  48301316 caacaaggatattcacatcaaaccaaattagatctatcaccacataggttaaatactctt 48301375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 167
Target Start/End: Original strand, 18823860 - 18823960
Alignment:
Q  67 attaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaacattaatt 165  Q
    |||||||| ||||||||||||| ||||| ||||   ||||||||||||||| ||||||||||| ||||||| ||  | | ||||||||||||||| ||||    
T  18823860 attaataacaacaacttgaatgatataaacaacgacattttctatatcatatattttccacat-aatatatatagcttaaattaaccaacaacatcaatt 18823958  T
Q  166 at 167  Q
    ||    
T  18823959 at 18823960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 38057463 - 38057394
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttc 123  Q
    |||||||||| ||| ||||||||||||||||||| ||| ||||| | || ||||||||||||||||||||    
T  38057463 caacatagcaacatcaataataacaacttgaatgatataaacaataataatttctatatcatacattttc 38057394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 55 - 122
Target Start/End: Complemental strand, 21181135 - 21181067
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacatttt 122  Q
    ||||||||||  |||||||||||||||||||||| ||| ||||||  |||||||||||||||| |||||    
T  21181135 caacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcatatatttt 21181067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 273 - 325
Target Start/End: Original strand, 23073270 - 23073322
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaa 325  Q
    |||||| |||||||||||||| ||||||||||| |||||||||||| ||||||    
T  23073270 caacaatgatattcacgtcaacccaagttagattcatcacaacataagttaaa 23073322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 67 - 130
Target Start/End: Complemental strand, 24815647 - 24815586
Alignment:
Q  67 attaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataa 130  Q
    |||||||||||||||||||||| |||||  ||  |||||||||||||||||||||||| |||||    
T  24815647 attaataataacaacttgaatgatataa--acgatattttctatatcatacattttcctcataa 24815586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 71 - 159
Target Start/End: Original strand, 13302045 - 13302132
Alignment:
Q  71 ataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaaca 159  Q
    |||||||||||||||||| ||| ||||||| ||||| |||||||||||| ||||||||| |||||||  || ||| ||||| ||||||||    
T  13302045 ataataacaacttgaatgatatgaacaacaatattt-ctatatcatacaatttccacat-aatatatagatctcaaattaaacaacaaca 13302132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 19762037 - 19761968
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttc 123  Q
    |||||||||| ||| ||||||||||||||||||| ||||| ||| | || |||| |||||||||||||||    
T  19762037 caacatagcaacatcaataataacaacttgaatgatataatcaataataatttccatatcatacattttc 19761968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 114
Target Start/End: Complemental strand, 10813333 - 10813273
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatca 114  Q
    ||||||||||  |||||||||||||||||||||| ||| ||||||  ||||||||||||||    
T  10813333 caacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatca 10813273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 200
Target Start/End: Complemental strand, 17903821 - 17903779
Alignment:
Q  158 cattaattattaataacatcatataacatcatagttatcaaca 200  Q
    |||||||||| || ||||||||||||||||||| |||||||||    
T  17903821 cattaattatgaacaacatcatataacatcatatttatcaaca 17903779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 8276802 - 8276733
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtata-acaacattattttctatatcatacattttc 123  Q
    ||||||| || ||| ||||| ||||||||||||| |||| |||| | || ||||||||||||||||||||    
T  8276802 caacataacaacatcaataacaacaacttgaatgatatatacaataataatttctatatcatacattttc 8276733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 159
Target Start/End: Original strand, 51082496 - 51082567
Alignment:
Q  86 atggtataacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaaca 159  Q
    ||||||||||||||||| ||||||||||||||| | | ||||| ||||||||||| ||| ||||  ||||||||    
T  51082496 atggtataacaacatta-tttctatatcatacaatattcacat-aatatatgtatctcaaattattcaacaaca 51082567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 200
Target Start/End: Complemental strand, 14793975 - 14793947
Alignment:
Q  172 aacatcatataacatcatagttatcaaca 200  Q
    |||||||||||||||||||||||||||||    
T  14793975 aacatcatataacatcatagttatcaaca 14793947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 5e-50; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 28 - 136
Target Start/End: Complemental strand, 17318954 - 17318846
Alignment:
Q  28 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 127  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17318954 cagagacaacaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 17318855  T
Q  128 taaatatat 136  Q
    |||||||||    
T  17318854 taaatatat 17318846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 28 - 139
Target Start/End: Complemental strand, 15891535 - 15891424
Alignment:
Q  28 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 127  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  15891535 cagagacaacaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaaaattattttctatatcatacattttccaca 15891436  T
Q  128 taaatatatgta 139  Q
    ||||||||||||    
T  15891435 taaatatatgta 15891424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 28 - 139
Target Start/End: Complemental strand, 27126309 - 27126198
Alignment:
Q  28 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 127  Q
    |||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  27126309 cagagacagcaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcataccttttccaca 27126210  T
Q  128 taaatatatgta 139  Q
    ||||| ||||||    
T  27126209 taaatttatgta 27126198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 28 - 139
Target Start/End: Original strand, 31733928 - 31734039
Alignment:
Q  28 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 127  Q
    ||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||    
T  31733928 cagagacaacaacatacaacaacttcacaacataacatcattaataataacaacttaaatggtataacaacattattttctatatcatacctttttcaca 31734027  T
Q  128 taaatatatgta 139  Q
    ||||||||||||    
T  31734028 taaatatatgta 31734039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 51 - 139
Target Start/End: Complemental strand, 23151075 - 23150987
Alignment:
Q  51 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 139  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  23151075 ttcacaacatagcataattaataataacaacttgaatggtacaacaacattattttctatatcatacattttccacataaatatatgta 23150987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 51 - 139
Target Start/End: Original strand, 18708743 - 18708830
Alignment:
Q  51 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 139  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  18708743 ttcacaacatagcatcattaataataa-aacttgaatggtataacaacattattttctatatcataccttttccacataactatatgta 18708830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 56 - 164
Target Start/End: Complemental strand, 31735732 - 31735624
Alignment:
Q  56 aacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaa 154  Q
    ||||||||| ||||||||||||||| ||||||| ||||| ||||| |||||||||||||| ||||||||||||||| ||||||||||||| |||||||||    
T  31735732 aacatagcaacattaataataacaatttgaatgatataaacaacaatattttctatatcaaacattttccacataa-tatatgtatttcaaattaaccaa 31735634  T
Q  155 caacattaat 164  Q
    ||||||||||    
T  31735633 caacattaat 31735624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 22 - 139
Target Start/End: Original strand, 24441136 - 24441251
Alignment:
Q  22 caacaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattt 121  Q
    ||||| ||||||||||| |||| | ||||||  ||||||||||  ||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||    
T  24441136 caacagcagagacaacaacata-agcaacttg-caacatagcaatattaataataacaacttgaatggtataacaacattatcttcaatatcataccttt 24441233  T
Q  122 tccacataaatatatgta 139  Q
    ||||||||||||||||||    
T  24441234 tccacataaatatatgta 24441251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 70 - 139
Target Start/End: Original strand, 7827234 - 7827303
Alignment:
Q  70 aataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 139  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||    
T  7827234 aataataacaacttgaatggtataacaaaattattttctatatcatacctttttcacataaatatatgta 7827303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 7827356 - 7827415
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  7827356 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactctt 7827415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 17318790 - 17318731
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  17318790 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactctt 17318731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 23150934 - 23150875
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  23150934 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactctt 23150875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 274 - 332
Target Start/End: Original strand, 13285094 - 13285152
Alignment:
Q  274 aacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  13285094 aacaaagatattcacgtcaaaccaagttagatccatcacaatataggttaaatactctt 13285152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 70 - 162
Target Start/End: Complemental strand, 22212303 - 22212211
Alignment:
Q  70 aataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaacatta 162  Q
    ||||||||||||||||||| ||||| ||| |||||||||||||||||||| ||| ||||| ||||||||||| ||| |||||||||||||||||    
T  22212303 aataataacaacttgaatgatataaacaaaattattttctatatcatacaattttcacat-aatatatgtatctcaaattaaccaacaacatta 22212211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 19655897 - 19655838
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  19655897 caacaaagatattcacgtcaaaccaaattagattcatcacaacataggttaaatactctt 19655838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 22556633 - 22556692
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  22556633 caacaaagatattcacgttaaaccaagttagatccatcacaaaataggttaaatactctt 22556692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 27126145 - 27126086
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  27126145 caacaaagatattcacgtcaaaccaaattaaatccatcacaacataggttaaatactctt 27126086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 27322227 - 27322172
Alignment:
Q  51 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattatttt 106  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  27322227 ttcacaacatagcatcattaataacaacaacttgaatggtataacaacattatttt 27322172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 13751195 - 13751052
Alignment:
Q  22 caacaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacatt 120  Q
    ||||| ||||||||||| |||| | ||||||  ||||||||||  ||||||||||||||||||||||  |||| ||||  ||||||||||||||||||||    
T  13751195 caacagcagagacaacaacata-agcaacttg-caacatagcaatattaataataacaacttgaatgaaataaacaacgatattttctatatcatacatt 13751098  T
Q  121 ttccacataaatatatgtatttcacattaaccaacaacattaattat 167  Q
    |||||||| ||||||| ||  | | ||||||||||||||| ||||||    
T  13751097 ttccacat-aatatatatagcttaaattaaccaacaacatcaattat 13751052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 274 - 332
Target Start/End: Original strand, 32259233 - 32259291
Alignment:
Q  274 aacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  32259233 aacagagatattcacgtcaaaccaagttagattcatcacaacataggttaaatactctt 32259291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 276 - 329
Target Start/End: Original strand, 19234584 - 19234637
Alignment:
Q  276 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatact 329  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19234584 caaagatattcacgtcaaaccaagttagattcatcacaacataggttaaatact 19234637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 275 - 332
Target Start/End: Original strand, 31734094 - 31734151
Alignment:
Q  275 acaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  31734094 acaaagatattcacgtcaaaccaaattagatctatcacaacataggttaaatactctt 31734151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 55 - 130
Target Start/End: Original strand, 18658448 - 18658524
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataa 130  Q
    ||||||||||  |||||||||||||||||||||| ||||| ||||  ||||||||||||||||||||||||||||||    
T  18658448 caacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcatacattttccacataa 18658524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 25921117 - 25921173
Alignment:
Q  276 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  25921117 caaagatattcacgtcaaaccaagttagtttcatcacaacataggttaaatactctt 25921173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 18702948 - 18703007
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||    
T  18702948 caacaaagatattcatgtcaaactaaattagatccatcacaacataggttaaatactctt 18703007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 18708883 - 18708942
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||    
T  18708883 caacaaagatattcatgtcaaactaaattagatccatcacaacataggttaaatactctt 18708942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 23491839 - 23491780
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||    
T  23491839 caacaaagatattcacgtcaaaccaaattagatccatcacaacatatgttagatactctt 23491780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 23497437 - 23497378
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||    
T  23497437 caacaaagatattcacgtcaaaccaaattagatccatcacaacatatgttagatactctt 23497378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 27318223 - 27318164
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||    
T  27318223 caacaaagatattcacgtcaaactaaattagatccatcacaacgtaggttaaatactctt 27318164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 28947728 - 28947787
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  28947728 caacaaaaatattcacgtcaaaccaaattaggtccatcacaacataggttaaatactctt 28947787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 277 - 332
Target Start/End: Original strand, 29044650 - 29044705
Alignment:
Q  277 aaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  29044650 aaagatattcacgtcaaaccaagttagattcatcacaacataggttatatactctt 29044705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 276 - 329
Target Start/End: Original strand, 18585007 - 18585060
Alignment:
Q  276 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatact 329  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  18585007 caaagatattcacgtcaaaccaagttagattcatcacaacttaggttaaatact 18585060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 167
Target Start/End: Complemental strand, 19444092 - 19443980
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 153  Q
    ||||||||||  |||||||| ||||||||||||| ||||| ||||  |||||||||||||||||||||||||||||| ||||| ||  |   ||||||||    
T  19444092 caacatagcaatattaataacaacaacttgaatgatataaacaacgatattttctatatcatacattttccacataa-tatatatagcttgaattaacca 19443994  T
Q  154 acaacattaattat 167  Q
    ||||||| ||||||    
T  19443993 acaacatcaattat 19443980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 130
Target Start/End: Original strand, 610982 - 611058
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataa 130  Q
    ||||||||||  |||||||||||||||||||||| ||| ||||||  |||||||||||||||||||||||| |||||    
T  610982 caacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcatacattttcctcataa 611058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 130
Target Start/End: Complemental strand, 29848315 - 29848239
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataa 130  Q
    ||||||||||  |||||||||||||||||||||| ||| ||||||| |||||||||||||| ||||||||| |||||    
T  29848315 caacatagcaatattaataataacaacttgaatgatataaacaacaatattttctatatcacacattttcctcataa 29848239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 55 - 167
Target Start/End: Complemental strand, 16133482 - 16133370
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 153  Q
    ||||||||||  |||||||| ||||||||||||| ||||| ||||   ||||||||||||||||||||||||||||| ||||| ||  |   ||||||||    
T  16133482 caacatagcaatattaataacaacaacttgaatgatataaacaacgacattttctatatcatacattttccacataa-tatatatagcttgaattaacca 16133384  T
Q  154 acaacattaattat 167  Q
    ||||||| ||||||    
T  16133383 acaacatcaattat 16133370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 15705279 - 15705220
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||| ||||||||||| |||||| ||||||||||||||||| | |||||||||||||    
T  15705279 caacaaaaatattcacgtccaaccaaattagatccatcacaacacatgttaaatactctt 15705220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 277 - 332
Target Start/End: Complemental strand, 18455734 - 18455680
Alignment:
Q  277 aaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||| |||||||| || ||||||||||||||||||||||||||    
T  18455734 aaagatattcacgtcaa-ccaagttatattcatcacaacataggttaaatactctt 18455680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 19773377 - 19773318
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||| || ||| ||||||||||||||||| | |||||||||||||    
T  19773377 caacaaagatattcacgtccaatcaaattagatccatcacaacacatgttaaatactctt 19773318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 277 - 319
Target Start/End: Complemental strand, 15891369 - 15891327
Alignment:
Q  277 aaagatattcacgtcaaaccaagttagatccatcacaacatag 319  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  15891369 aaagatattcacgtcaaaccaaattagatccatcacaacatag 15891327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 55 - 130
Target Start/End: Original strand, 13764592 - 13764668
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataa 130  Q
    ||||||||||  |||||||||||||||||||||| ||| ||||||  |||||||||||||| |||||| || |||||    
T  13764592 caacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcacacatttccctcataa 13764668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 18927964 - 18928010
Alignment:
Q  154 acaacattaattattaataacatcatataacatcatagttatcaaca 200  Q
    ||||||||||| ||||| |||||||||||||||||||| ||||||||    
T  18927964 acaacattaatcattaaaaacatcatataacatcatagctatcaaca 18928010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 200
Target Start/End: Complemental strand, 20411511 - 20411462
Alignment:
Q  153 aacaacattaattat--taataacatcatataacatcatagttatcaaca 200  Q
    |||||||||||| ||  |||||||||||||||||||||||||||||||||    
T  20411511 aacaacattaatcatcttaataacatcatataacatcatagttatcaaca 20411462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 22806217 - 22806271
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaata 327  Q
    ||||||||||||||||||| |||||| ||||||||||||| ||| | ||||||||    
T  22806217 caacaaagatattcacgtccaaccaaattagatccatcaccacacatgttaaata 22806271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 139
Target Start/End: Complemental strand, 27318314 - 27318276
Alignment:
Q  101 tattttctatatcatacattttccacataaatatatgta 139  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  27318314 tattttatatatcatacattttccacataaatatatgta 27318276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 295 - 332
Target Start/End: Original strand, 18398325 - 18398362
Alignment:
Q  295 ccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||| |||||||||||||    
T  18398325 ccaagttagatccatcacaacataagttaaatactctt 18398362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 19829764 - 19829695
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttc 123  Q
    |||||||||| ||| ||||||| ||||||||||| ||| ||||| | || ||||||||||||||||||||    
T  19829764 caacatagcaacatcaataatatcaacttgaatgatataaacaataataatttctatatcatacattttc 19829695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 28 - 75
Target Start/End: Original strand, 7825866 - 7825913
Alignment:
Q  28 cagagacaacatcatacaccaacttcacaacatagcatcattaataat 75  Q
    |||||||| || |||||| ||||||||||||||| |||||||||||||    
T  7825866 cagagacagcaacatacaacaacttcacaacataacatcattaataat 7825913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 24266976 - 24267119
Alignment:
Q  22 caacaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacatt 120  Q
    |||||||||||||| || |||| | ||||||  ||||||| ||  |||||||| ||||||||||||| ||||| |||    ||||| |||||||||||||    
T  24266976 caacaacagagacagcaacata-agcaacttg-caacataacaatattaataacaacaacttgaatgatataaacaaggacattttttatatcatacatt 24267073  T
Q  121 ttccacataaatatatgtatttcacattaaccaacaacattaattat 167  Q
    || ||||| ||||||| ||  | | ||||||||||||||| ||||||    
T  24267074 tttcacat-aatatatatagcttaaattaaccaacaacatcaattat 24267119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 200
Target Start/End: Complemental strand, 18458606 - 18458574
Alignment:
Q  168 taataacatcatataacatcatagttatcaaca 200  Q
    |||||||||||||||| ||||||||||||||||    
T  18458606 taataacatcatataaaatcatagttatcaaca 18458574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 332
Target Start/End: Complemental strand, 22523617 - 22523577
Alignment:
Q  292 aaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||||   ||||||||||||||||||    
T  22523617 aaaccaagttagatccatcatgccataggttaaatactctt 22523577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 3e-48; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 28 - 161
Target Start/End: Original strand, 36839394 - 36839527
Alignment:
Q  28 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 127  Q
    ||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  36839394 cagagacaacaacatacgacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacactattttctatatcatacattttccaca 36839493  T
Q  128 taaatatatgtatttcacattaaccaacaacatt 161  Q
    ||||||||||||  ||| ||||  ||||||||||    
T  36839494 taaatatatgtaactcaaattattcaacaacatt 36839527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 24 - 139
Target Start/End: Complemental strand, 27485306 - 27485191
Alignment:
Q  24 acaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttc 123  Q
    |||||||||||| || ||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27485306 acaacagagacatcaacatatcacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttc 27485207  T
Q  124 cacataaatatatgta 139  Q
    ||||||||||||||||    
T  27485206 cacataaatatatgta 27485191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 28 - 139
Target Start/End: Complemental strand, 28653334 - 28653223
Alignment:
Q  28 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 127  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  28653334 cagagacaacaacatacaacaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattatctatatcataccttttccaca 28653235  T
Q  128 taaatatatgta 139  Q
    ||||||||||||    
T  28653234 taaatatatgta 28653223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 28 - 139
Target Start/End: Original strand, 9975148 - 9975259
Alignment:
Q  28 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 127  Q
    ||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  9975148 cagagacaacaacatacaacaactttacaacatagcatcattaataataacaacttgaatggtataacaacattattttctataccatacattttccaca 9975247  T
Q  128 taaatatatgta 139  Q
    || |||||||||    
T  9975248 tatatatatgta 9975259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 47 - 139
Target Start/End: Complemental strand, 23969436 - 23969344
Alignment:
Q  47 caacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 139  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23969436 caacttcacaacatatcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 23969344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 28 - 139
Target Start/End: Original strand, 17306707 - 17306818
Alignment:
Q  28 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 127  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||| |||||||||    
T  17306707 cagagacaacaacatacaacaacttcacaacatagcatcattaataataacaacttgaattttataacaatattattttctatatcataccttttccaca 17306806  T
Q  128 taaatatatgta 139  Q
    ||||||||||||    
T  17306807 taaatatatgta 17306818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 28 - 139
Target Start/End: Original strand, 24515406 - 24515517
Alignment:
Q  28 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 127  Q
    ||||||||||| |||||| ||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  24515406 cagagacaacaacatacaacaacttcgcaacatagcatcattaatcataacaacttcaatggtataacaacattattttctatatcataccttttccaca 24515505  T
Q  128 taaatatatgta 139  Q
    ||||||||||||    
T  24515506 taaatatatgta 24515517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 29 - 139
Target Start/End: Original strand, 19358152 - 19358262
Alignment:
Q  29 agagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacat 128  Q
    ||||||| || |||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  19358152 agagacatcaacatacaacaactttacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatatcataccttttccacat 19358251  T
Q  129 aaatatatgta 139  Q
    |||||||||||    
T  19358252 aaatatatgta 19358262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 51 - 139
Target Start/End: Complemental strand, 24781649 - 24781561
Alignment:
Q  51 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 139  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  24781649 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatatcttttccacataaatatatgta 24781561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 68 - 139
Target Start/End: Complemental strand, 5031922 - 5031851
Alignment:
Q  68 ttaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 139  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  5031922 ttaataataacaacttgaatgatataacaacattattttctatatcataccttttccacataaatatatgta 5031851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 63 - 164
Target Start/End: Original strand, 5985336 - 5985435
Alignment:
Q  63 catcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaacatta 162  Q
    ||||| |||||| ||||||||| ||| |||||||||||||||||||||||||||| |||| ||||| |||||||| ||||||||||||||||||||||||    
T  5985336 catcaataataacaacaacttggatgatataacaacattattttctatatcatacctttt-cacat-aatatatgaatttcacattaaccaacaacatta 5985433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 58 - 163
Target Start/End: Original strand, 14693456 - 14693561
Alignment:
Q  58 catagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaa 157  Q
    ||||||| ||||||| ||||||||||||||| ||||||| || |||||||||||||||||||||||||||||| | ||| ||  ||| |||||||||| |    
T  14693456 catagcaacattaatcataacaacttgaatgatataacatcaatattttctatatcatacattttccacataattgtatatagctcaaattaaccaacca 14693555  T
Q  158 cattaa 163  Q
    ||||||    
T  14693556 cattaa 14693561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 9975313 - 9975372
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  9975313 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactctt 9975372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 22686224 - 22686283
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22686224 caacaaagttattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 22686283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 36839555 - 36839614
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  36839555 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactctt 36839614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 273 - 326
Target Start/End: Complemental strand, 25587354 - 25587301
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaat 326  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25587354 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaat 25587301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 5031798 - 5031739
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  5031798 caacaaagatattcacgtcaaaccaaattagatccatcacaacatatgttaaatactctt 5031739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 24781508 - 24781449
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  24781508 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatattctt 24781449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 43707952 - 43707893
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  43707952 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaataatctt 43707893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 164
Target Start/End: Complemental strand, 10897628 - 10897487
Alignment:
Q  23 aacaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattt 121  Q
    |||| ||||||||||| |||||| |||||| | | ||||||| ||||||||||||| ||||| ||||||||| ||  | |||||| |||| ||||  |||    
T  10897628 aacagcagagacaacaacatacaacaacttga-atcatagcaacattaataataaccacttggatggtataaacatgaatattttgtataacatatcttt 10897530  T
Q  122 tccacataaatatatgtatttcacattaaccaacaacattaat 164  Q
    ||||||||||||||||||  ||| ||| |||||||||||||||    
T  10897529 tccacataaatatatgtagctcaaatttaccaacaacattaat 10897487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 71 - 158
Target Start/End: Original strand, 27851836 - 27851922
Alignment:
Q  71 ataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaac 158  Q
    |||||||||||||||||| ||| ||||||| ||||| |||||||||||| ||||||||||| ||||||||||||| |||||||||||||    
T  27851836 ataataacaacttgaatgatatgaacaacaatattt-ctatatcatacaatttccacataa-tatatgtatttcaaattaaccaacaac 27851922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 23969291 - 23969232
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||    
T  23969291 caacaaagatatttacgtcaaaccaaattagatcaatcacaacataggttaaatactctt 23969232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 24515570 - 24515629
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||    
T  24515570 caacaaagatattcatgtcaaaccaaattagatccatcacaacatagattaaatactctt 24515629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 276 - 330
Target Start/End: Complemental strand, 1384350 - 1384296
Alignment:
Q  276 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactc 330  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  1384350 caaagatattcacgtcaaaccaagttagattcatcacagcataggttaaatactc 1384296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 273 - 326
Target Start/End: Original strand, 17306871 - 17306924
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaat 326  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  17306871 caacaaagatattcacgtcaaaccaaattagatccatcacaacatatgttaaat 17306924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 273 - 329
Target Start/End: Complemental strand, 28345743 - 28345687
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatact 329  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||    
T  28345743 caacaaagatattcatgtcaaaccaagttagatccatcacaacatagattaagtact 28345687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 19201869 - 19201810
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||| ||||||||| ||||||||| ||||||||||||| |||||||||||||||||||    
T  19201869 caacaaggatattcacatcaaaccaaattagatccatcaccacataggttaaatactctt 19201810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 277 - 332
Target Start/End: Complemental strand, 21316325 - 21316270
Alignment:
Q  277 aaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||    
T  21316325 aaagatattcacgtcaaatcaagatagattcatcacaacataggttaaatactctt 21316270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 277 - 332
Target Start/End: Complemental strand, 21336116 - 21336061
Alignment:
Q  277 aaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||    
T  21336116 aaagatattcacgtcaaaccaagatagattcatcccaacataggttaaatactctt 21336061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 23069118 - 23069059
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||| |||||| ||||||||||||||||| | |||||||||||||    
T  23069118 caacaaagatattcacgtccaaccaaattagatccatcacaacacatgttaaatactctt 23069059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 277 - 332
Target Start/End: Original strand, 23609865 - 23609920
Alignment:
Q  277 aaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||||||  | |||||||||||||||||||||||    
T  23609865 aaagatattcacgtcaaaccaagttagatttaccacaacataggttaaatactctt 23609920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 27485138 - 27485079
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||| |||||||||||||||||| |||||||||||| |||||| |||||||||||||    
T  27485138 caacaaatatattcacgtcaaaccaaattagatccatcaaaacatatgttaaatactctt 27485079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 28653170 - 28653111
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||| ||||||| ||||||||||||||| ||| |||||||||||||    
T  28653170 caacaaagatattcacgtgaaaccaaattagatccatcacaagatatgttaaatactctt 28653111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 71 - 164
Target Start/End: Original strand, 27860542 - 27860634
Alignment:
Q  71 ataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaacattaat 164  Q
    |||||||||||||||||| ||| ||||||| ||||| |||||||||||| ||||||||| ||||||| ||| |||  ||||||||||||||||||    
T  27860542 ataataacaacttgaatgatatgaacaacaatattt-ctatatcatacaatttccacat-aatatatctatctcaatttaaccaacaacattaat 27860634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 164
Target Start/End: Original strand, 44071733 - 44071841
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 153  Q
    ||||||| || || |||||||||||||||||| | ||| ||||||| ||||| |||||||||||| ||||||||| ||||||||||| ||| |||| |||    
T  44071733 caacataacaacactaataataacaacttgaacgatatgaacaacaatattt-ctatatcatacaatttccacat-aatatatgtatctcaaattatcca 44071830  T
Q  154 acaacattaat 164  Q
    |||||| ||||    
T  44071831 acaacaataat 44071841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 279 - 328
Target Start/End: Complemental strand, 24273921 - 24273872
Alignment:
Q  279 agatattcacgtcaaaccaagttagatccatcacaacataggttaaatac 328  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  24273921 agatattcacgtcaaaccaaattagattcatcacaacataggttaaatac 24273872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 130
Target Start/End: Original strand, 31520371 - 31520435
Alignment:
Q  67 attaataataacaacttgaatggta-taacaacattattttctatatcatacattttccacataa 130  Q
    |||||||||||||||||||||| || ||||||   ||||||||||||||||||||||||||||||    
T  31520371 attaataataacaacttgaatgataataacaatgatattttctatatcatacattttccacataa 31520435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 157
Target Start/End: Complemental strand, 18391124 - 18391038
Alignment:
Q  71 ataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaa 157  Q
    |||||||||||||||||| ||| ||||||| ||||| | |||||||| ||||||||||| ||||||||||  ||| ||||||||||||    
T  18391124 ataataacaacttgaatgatatgaacaacaatatttccgatatcatatattttccacat-aatatatgtagctcaaattaaccaacaa 18391038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 21368491 - 21368550
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||| ||||||||| ||||||||| |||||||||| || |||||||||||||||||||    
T  21368491 caacaaggatattcacatcaaaccaaattagatccattaccacataggttaaatactctt 21368550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 55 - 130
Target Start/End: Complemental strand, 6478110 - 6478034
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataa 130  Q
    ||||||||||  |||||||| ||||||||||||| ||||| ||||   |||||||||||||| ||||||||||||||    
T  6478110 caacatagcaatattaataacaacaacttgaatgatataaacaacgacattttctatatcatccattttccacataa 6478034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 292 - 332
Target Start/End: Original strand, 22332121 - 22332161
Alignment:
Q  292 aaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  22332121 aaaccaagttagattcatcacaacataggttaaatactctt 22332161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 20915375 - 20915429
Alignment:
Q  148 taaccaacaacattaattat--taataacatcatataacatcatagttatcaaca 200  Q
    |||| |||||||||||| ||  |||||||||||||||||||||||||||||||||    
T  20915375 taactaacaacattaatcatcttaataacatcatataacatcatagttatcaaca 20915429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 329
Target Start/End: Original strand, 9784966 - 9785022
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatact 329  Q
    |||||||||||||||||||  ||||| |||||| |||||||||| | ||||||||||    
T  9784966 caacaaagatattcacgtccgaccaaattagattcatcacaacacatgttaaatact 9785022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 332
Target Start/End: Original strand, 24841356 - 24841396
Alignment:
Q  292 aaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||| | ||||||||||||||||||||||    
T  24841356 aaaccaagttagatcccttacaacataggttaaatactctt 24841396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 157 - 200
Target Start/End: Original strand, 25140214 - 25140257
Alignment:
Q  157 acattaattattaataacatcatataacatcatagttatcaaca 200  Q
    |||||||| ||||||||||||| |||||||||||||||| ||||    
T  25140214 acattaatcattaataacatcacataacatcatagttattaaca 25140257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 200
Target Start/End: Original strand, 22689956 - 22690005
Alignment:
Q  153 aacaacattaattatt--aataacatcatataacatcatagttatcaaca 200  Q
    |||||||||||| |||  ||||||||||||||||||||| ||||||||||    
T  22689956 aacaacattaatcattttaataacatcatataacatcattgttatcaaca 22690005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 200
Target Start/End: Original strand, 22694552 - 22694601
Alignment:
Q  153 aacaacattaattatt--aataacatcatataacatcatagttatcaaca 200  Q
    |||||||||||| |||  ||||||||||||||||||||| ||||||||||    
T  22694552 aacaacattaatcattttaataacatcatataacatcattgttatcaaca 22694601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 159
Target Start/End: Original strand, 3538981 - 3539084
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 153  Q
    ||||||| || ||| || || ||||||||||||| ||| ||||||| ||||| |||||||||||| | | ||||||| ||||||||| ||| |||| |||    
T  3538981 caacataacaacatcaacaacaacaacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataa-tatatgtatctcaaattatcca 3539078  T
Q  154 acaaca 159  Q
    ||||||    
T  3539079 acaaca 3539084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 18389109 - 18389040
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttc 123  Q
    |||||||||| |||  |||||||||||||||||| ||| ||||| | || |||| |||||||||||||||    
T  18389109 caacatagcaacatcgataataacaacttgaatgatataaacaataataatttccatatcatacattttc 18389040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 332
Target Start/End: Original strand, 29113764 - 29113805
Alignment:
Q  291 caaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||| |||||||| | |||||||||||||||||||||||||    
T  29113764 caaacaaagttagaccaatcacaacataggttaaatactctt 29113805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 160 - 200
Target Start/End: Complemental strand, 10744463 - 10744423
Alignment:
Q  160 ttaattattaataacatcatataacatcatagttatcaaca 200  Q
    ||||| |||||||||| ||||| ||||||||||||||||||    
T  10744463 ttaatcattaataacaacatatcacatcatagttatcaaca 10744423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 156
Target Start/End: Original strand, 20261154 - 20261198
Alignment:
Q  113 catacattttccacataa-atatatgtatttcacattaaccaaca 156  Q
    |||| ||||||||||||| |||||| |||||||||||||||||||    
T  20261154 catatattttccacataatatatatatatttcacattaaccaaca 20261198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 96; Significance: 5e-47; HSPs: 2)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 28 - 139
Target Start/End: Complemental strand, 5545 - 5434
Alignment:
Q  28 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 127  Q
    ||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  5545 cagagacaacaacatacaacaacttcacaacatagcaacattaataataacaacttgaatggtataacaacattattttctatatcatactttttccaca 5446  T
Q  128 taaatatatgta 139  Q
    ||||||||||||    
T  5445 taaatatatgta 5434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 5381 - 5322
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  5381 caacaaagatattcacgtcaaaccaaattagatccatcacaacatagtttaaatactctt 5322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 29 - 139
Target Start/End: Original strand, 57969 - 58079
Alignment:
Q  29 agagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacat 128  Q
    |||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  57969 agagacaacaacatacaacaacttcacgacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcataccttttccacat 58068  T
Q  129 aaatatatgta 139  Q
    |||||||||||    
T  58069 aaatatatgta 58079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 58132 - 58191
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||    
T  58132 caacaaagatattcacgtcaaaccaaattagattcatcacaacacaggttaaatactctt 58191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1662 (Bit Score: 92; Significance: 1e-44; HSPs: 2)
Name: scaffold1662
Description:

Target: scaffold1662; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 28 - 139
Target Start/End: Complemental strand, 253 - 142
Alignment:
Q  28 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 127  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  253 cagagacaacaacatacaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatatcatacattttccaca 154  T
Q  128 taaatatatgta 139  Q
     || ||||||||    
T  153 aaattatatgta 142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1662; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 89 - 30
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  89 caacaaagatattaacgtcaaaccaaattagatccatcacaacataggttaaatactctt 30  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1817 (Bit Score: 91; Significance: 5e-44; HSPs: 2)
Name: scaffold1817
Description:

Target: scaffold1817; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 29 - 139
Target Start/End: Complemental strand, 228 - 118
Alignment:
Q  29 agagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacat 128  Q
    |||||||||| |||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  228 agagacaacaacatacaacaatttcacaacatagcatcattaataataacaacttaaatggtataacaacattattttctatatcataccttttccacat 129  T
Q  129 aaatatatgta 139  Q
    |||||||||||    
T  128 aaatatatgta 118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1817; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 275 - 328
Target Start/End: Complemental strand, 63 - 10
Alignment:
Q  275 acaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatac 328  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  63 acaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatac 10  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 88; Significance: 3e-42; HSPs: 4)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 28 - 139
Target Start/End: Complemental strand, 13366 - 13255
Alignment:
Q  28 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 127  Q
    ||||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||    
T  13366 cagagacaataacatacaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccaca 13267  T
Q  128 taaatatatgta 139  Q
    ||||||||||||    
T  13266 taaatatatgta 13255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 28 - 139
Target Start/End: Complemental strand, 19633 - 19522
Alignment:
Q  28 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 127  Q
    ||||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||    
T  19633 cagagacaagaacatacaacaacttcacaacatagcatcattaataataacaacttgaatgatataacaacattattttctatattataccttttccaca 19534  T
Q  128 taaatatatgta 139  Q
    ||||||||||||    
T  19533 taaatatatgta 19522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 13204 - 13145
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  13204 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactctt 13145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 19471 - 19412
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19471 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactctt 19412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 29 - 139
Target Start/End: Complemental strand, 47399 - 47290
Alignment:
Q  29 agagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacat 128  Q
    |||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  47399 agagacaacaacatacaacaacttcacaacatagcatcattaattataacaacttgaatggtataacaacatt-ttttctatatcataccttttccacat 47301  T
Q  129 aaatatatgta 139  Q
    |||||||||||    
T  47300 aaatatatgta 47290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 66 - 164
Target Start/End: Original strand, 28532 - 28628
Alignment:
Q  66 cattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaacattaat 164  Q
    ||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  28532 cattaataataacaacttgaatgatataacaacattagtttctgtatcatacatttt-cacat-aatatatgtatttcacattaaccaacaacattaat 28628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 83; Significance: 3e-39; HSPs: 2)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 51 - 161
Target Start/End: Complemental strand, 9567 - 9457
Alignment:
Q  51 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgtatttcacattaa 150  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||  ||| ||||     
T  9567 ttcacaacatagcatcattaataataacaacttgaaaggtataacaacattattttctatatcataccttttccacataaatatatgtaactcaaattat 9468  T
Q  151 ccaacaacatt 161  Q
     ||||||||||    
T  9467 tcaacaacatt 9457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 305
Target Start/End: Complemental strand, 9429 - 9397
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagat 305  Q
    |||||||||||||||||||||||||| ||||||    
T  9429 caacaaagatattcacgtcaaaccaaattagat 9397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 81; Significance: 4e-38; HSPs: 2)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 51 - 139
Target Start/End: Complemental strand, 10035 - 9947
Alignment:
Q  51 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 139  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  10035 ttcacaacatagcataattaataataacaacttgaatggtacaacaacattattttctatatcatacattttccacataaatatatgta 9947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 9894 - 9835
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  9894 caacaaagatattcacgtcaaaccaaattagatccatcacaatataggttaaatactctt 9835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 2e-37; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 28 - 139
Target Start/End: Original strand, 19920854 - 19920965
Alignment:
Q  28 cagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccaca 127  Q
    |||||||| || || ||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||    
T  19920854 cagagacagcaacacacaacaacttcacaacatatcatcattaataataataacttgaatggtataacaacattattttctatatcatagtttttccaca 19920953  T
Q  128 taaatatatgta 139  Q
    ||||||||||||    
T  19920954 taaatatatgta 19920965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 54 - 180
Target Start/End: Complemental strand, 23200368 - 23200244
Alignment:
Q  54 acaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 153  Q
    ||||||||||| ||| || ||||||| |||||||| |||||||||||||||||||||| ||||| ||||| |||||| ||||||||||||||||||||||    
T  23200368 acaacatagcagcatcaacaataacatcttgaatgatataacaacattattttctataacataccttttc-acataa-tatatgtatttcacattaacca 23200271  T
Q  154 acaacattaattattaataacatcata 180  Q
    ||||||||||| |||||||||||||||    
T  23200270 acaacattaatcattaataacatcata 23200244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 30611937 - 30611996
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  30611937 caacaaagatattcacgtcacaccaagttagatccatcacaacataggttaaatactctt 30611996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 277 - 332
Target Start/End: Complemental strand, 16605267 - 16605212
Alignment:
Q  277 aaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  16605267 aaagatattcacgtcaaaccaagttagattcatcacaacataggttaaatactctt 16605212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 19921018 - 19921077
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  19921018 caacaaagatattcacgtcaaaccaaattagatccatcacaacatatgttaaatactctt 19921077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 20198256 - 20198197
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  20198256 caacaaagatattcacgtcaaaccaaattagatccatcaaaacataggttaaatactctt 20198197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 23200057 - 23199998
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  23200057 caacaacgatattcacgtcaaaccaagttagatccatcaaaacataggttaaatactctt 23199998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 30613897 - 30613956
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  30613897 caacaaagatattcacgtcacaccaagttagattcatcacaacataggttaaatactctt 30613956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 22110987 - 22111043
Alignment:
Q  276 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  22110987 caaagatattcacgtcaaaccaagttatattcatcacaacataggttaaatactctt 22111043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 55 - 130
Target Start/End: Complemental strand, 24277416 - 24277340
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataa 130  Q
    ||||||||||  |||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||| |||||    
T  24277416 caacatagcaatattaataataacaacttgaatggtataaacaacgatattttctatatcatacattttcctcataa 24277340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 55 - 130
Target Start/End: Original strand, 24384797 - 24384873
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataa 130  Q
    ||||||||||  |||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||| |||||    
T  24384797 caacatagcaatattaataataacaacttgaatggtataaacaacgatattttctatatcatacattttcctcataa 24384873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 277 - 332
Target Start/End: Original strand, 18744038 - 18744093
Alignment:
Q  277 aaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  18744038 aaagatattcacgtcaaaccaagatagattcatcacaacataggttaaatactctt 18744093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 20565938 - 20565997
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  20565938 caacatagatattcacatcaaaccaaattagatccatcacaacataggttaaatactctt 20565997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 32607992 - 32607934
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  32607992 caacaaagatattcacgtcaagccaa-ttagatccatcacaacataggttaaatactctt 32607934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 36509444 - 36509386
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  36509444 caacaaaaatattcacgtcaaaccaa-ttagatccatcacaacataggttaaatactctt 36509386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 29 - 123
Target Start/End: Complemental strand, 25250725 - 25250632
Alignment:
Q  29 agagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttc 123  Q
    |||||||||| |||| | ||||||  |||||||||| ||||||||| ||||| ||| ||| |||| |||||||||||||||||||||||||||||    
T  25250725 agagacaacaacataaaacaacttg-caacatagcaacattaataacaacaaattggatgatatatcaacattattttctatatcatacattttc 25250632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 29 - 123
Target Start/End: Complemental strand, 25314510 - 25314417
Alignment:
Q  29 agagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttc 123  Q
    |||||||||| |||| | ||||||  |||||||||| ||||||||| ||||| ||| ||| |||| |||||||||||||||||||||||||||||    
T  25314510 agagacaacaacataaaacaacttg-caacatagcaacattaataacaacaaattggatgatatatcaacattattttctatatcatacattttc 25314417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 280 - 332
Target Start/End: Complemental strand, 1628041 - 1627989
Alignment:
Q  280 gatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  1628041 gatattcacgtcaaaccaatttagattcatcacaacataggttaaatactctt 1627989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 8952891 - 8952750
Alignment:
Q  22 caacaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacatt 120  Q
    ||||||||||||||||| |||| | ||||||  ||||||||||  |||||||| ||||||||||||| ||||| ||||   |||||||||||||||||||    
T  8952891 caacaacagagacaacaacata-agcaacttg-caacatagcaatattaataacaacaacttgaatgatataaacaacgacattttctatatcatacatt 8952794  T
Q  121 ttccacataaatatatgtatttcacattaaccaacaacattaattat 167  Q
    |||||||   |||||| ||  | | ||||||||||||||| ||||||    
T  8952793 ttccaca---atatatatagcttaaattaaccaacaacatcaattat 8952750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 277 - 332
Target Start/End: Complemental strand, 14026471 - 14026416
Alignment:
Q  277 aaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||    
T  14026471 aaagatattcacgtcaaaccaagatagattcattacaacataggttaaatactctt 14026416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 21399671 - 21399612
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||| |||||| |||||| |||||||| |||||||||||||||||    
T  21399671 caacaaagatattcacgtctaaccaaattagattcatcacaaaataggttaaatactctt 21399612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 33895550 - 33895491
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||| ||||||||| |||||||||||||  ||||||||||||||||||    
T  33895550 caacaaagatattcacatcaaaccaaattagatccatcaccgcataggttaaatactctt 33895491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 76 - 167
Target Start/End: Complemental strand, 22357747 - 22357656
Alignment:
Q  76 aacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaacattaattat 167  Q
    ||||||||||||| ||||| |||||  ||||||||||||||||||||||||||| ||||||| ||  | | ||||||||||||||| ||||||    
T  22357747 aacaacttgaatgatataaacaacaacattttctatatcatacattttccacat-aatatatatagcttaaattaaccaacaacatcaattat 22357656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 118
Target Start/End: Complemental strand, 21406524 - 21406431
Alignment:
Q  23 aacaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcataca 118  Q
    |||| |||||||| || |||||| |||||| | | ||||||| ||||||||||||| ||||| ||||||||||||||||| ||| |||||||||||    
T  21406524 aacagcagagacagcaacatacaacaacttga-atcatagcaacattaataataaccacttggatggtataacaacatta-tttgtatatcataca 21406431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 20469884 - 20469827
Alignment:
Q  106 tctatatcatacattttccacataaatatatgtatttcacattaaccaacaacattaat 164  Q
    ||||||||||||| ||||||||||| ||||||||| ||| |||||||||||||||||||    
T  20469884 tctatatcatacaatttccacataa-tatatgtatctcaaattaaccaacaacattaat 20469827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 58 - 140
Target Start/End: Complemental strand, 32608164 - 32608084
Alignment:
Q  58 catagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgtat 140  Q
    ||||||| ||||||||||||| ||||| ||| ||||||||||||| ||||||||||||||| | | ||||| |||||||||||    
T  32608164 catagcaacattaataataaccacttggatgatataacaacatta-tttctatatcatacaatattcacat-aatatatgtat 32608084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 55 - 130
Target Start/End: Original strand, 17812638 - 17812714
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataa 130  Q
    ||||||||||  |||||||||||||||||||||| ||| ||||||  |||||||||||||| |||||| || |||||    
T  17812638 caacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcacacatttccctcataa 17812714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 123
Target Start/End: Original strand, 10953214 - 10953283
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttc 123  Q
    |||||||||| ||| || |||||||||||||||||||| ||||| | || |||| |||||||||||||||    
T  10953214 caacatagcaacatcaacaataacaacttgaatggtataaacaataataatttccatatcatacattttc 10953283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 37805163 - 37805118
Alignment:
Q  112 tcatacattttccacataa-atatatgtatttcacattaaccaaca 156  Q
    ||||| ||||||||||||| |||||| |||||||||||||||||||    
T  37805163 tcatatattttccacataatatatatatatttcacattaaccaaca 37805118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 79; Significance: 7e-37; HSPs: 2)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 29 - 139
Target Start/End: Original strand, 386 - 496
Alignment:
Q  29 agagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacat 128  Q
    |||||||||| | |||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||| ||    
T  386 agagacaacaacgtacaacaacttcacaacatatcatcattaataataacaacttgaatggtataaaaacgttattttctatatcataccttttccatat 485  T
Q  129 aaatatatgta 139  Q
    |||||||||||    
T  486 aaatatatgta 496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 549 - 608
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  549 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactctt 608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 79; Significance: 7e-37; HSPs: 2)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 57 - 139
Target Start/End: Complemental strand, 9106 - 9024
Alignment:
Q  57 acatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgta 139  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9106 acatagcatcattaataataacaacttgaatgatataacaacattattttctatatcatacattttccacataaatatatgta 9024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 274 - 332
Target Start/End: Complemental strand, 8970 - 8912
Alignment:
Q  274 aacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||||||||| ||||||||||||||  |||| ||||||||||||    
T  8970 aacaaagatattcacgtcaaaccaaattagatccatcacattatagtttaaatactctt 8912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 78; Significance: 3e-36; HSPs: 2)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 51 - 139
Target Start/End: Complemental strand, 8195 - 8106
Alignment:
Q  51 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcata-cattttccacataaatatatgta 139  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  8195 ttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacctttttccacataaatatatgta 8106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 8053 - 7994
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8053 caacaaagatgttcacgtcaaaccaaattagatccatcacaacataggttaaatactctt 7994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 55 - 167
Target Start/End: Complemental strand, 34201 - 34089
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 153  Q
    |||||||||| ||||||||||||||||||||||| ||| ||||||| ||| |||||||||||||||||||||||| ||||||||||  ||| ||||||||    
T  34201 caacatagcaacattaataataacaacttgaatgatataaacaacaatatcttctatatcatacattttccacat-aatatatgtaactcaaattaacca 34103  T
Q  154 acaacattaattat 167  Q
    ||||||| ||||||    
T  34102 acaacatcaattat 34089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 66; Significance: 4e-29; HSPs: 3)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 23618 - 23711
Alignment:
Q  30 gagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttc 123  Q
    ||||||||| |||||| ||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||| |||||    
T  23618 gagacaacaacatacaacaatttcacaacatagcatcattaatgataacaacttaaatggtataacaacattattttctacatcataccttttc 23711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 22442 - 22501
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||    
T  22442 caacaaagatattcacgtcaaaccaaattagattcatcacaacataggttagatactctt 22501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 159
Target Start/End: Original strand, 22322 - 22409
Alignment:
Q  70 aataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaaca 159  Q
    ||||||||| ||||| ||||||||||||||||| ||||||||||||||| | | ||||| ||||||||||| ||| ||||  ||||||||    
T  22322 aataataaccacttggatggtataacaacatta-tttctatatcatacaatattcacat-aatatatgtatctcaaattattcaacaaca 22409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 54 - 180
Target Start/End: Original strand, 773 - 892
Alignment:
Q  54 acaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 153  Q
    ||||||||||| ||||||||| |||| |||| ||| |||||||||||||||||||||| |      ||| ||||||| ||||||||||||||||||||||    
T  773 acaacatagcagcattaataacaacatcttggatgatataacaacattattttctatacc------ttttcacataa-tatatgtatttcacattaacca 865  T
Q  154 acaacattaattattaataacatcata 180  Q
    |||| |||||| |||||||||||||||    
T  866 acaagattaatcattaataacatcata 892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 22 - 164
Target Start/End: Complemental strand, 127258 - 127119
Alignment:
Q  22 caacaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattt 121  Q
    ||||| ||||||||||| |||| | || |||  |||||||||| | ||||||| ||||||||| ||| ||||| ||||||||||||  |||||||| |||    
T  127258 caacagcagagacaacaacataaaacagcttg-caacatagcaactttaataacaacaacttggatgatataataacattattttccctatcataccttt 127160  T
Q  122 tccacataaatatatgtatttcacattaaccaacaacattaat 164  Q
     |||||||| |||||||||||||||||||||||||||||||||    
T  127159 -ccacataa-tatatgtatttcacattaaccaacaacattaat 127119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 55 - 167
Target Start/End: Original strand, 6862 - 6974
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 153  Q
    |||||||||| |||||||||||||||||  |||| ||||| ||||| |||||||||||||||||||||||||||| ||||||||||  | | ||||||||    
T  6862 caacatagcaacattaataataacaactcaaatgatataaacaacaatattttctatatcatacattttccacat-aatatatgtagcttaaattaacca 6960  T
Q  154 acaacattaattat 167  Q
    ||||||| ||||||    
T  6961 acaacatcaattat 6974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 273 - 330
Target Start/End: Complemental strand, 62638 - 62581
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactc 330  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  62638 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactc 62581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 1135 - 1076
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1135 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactctt 1076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 39483 - 39542
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  39483 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactctt 39542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 15254 - 15195
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  15254 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactctt 15195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 24312 - 24253
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  24312 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatactctt 24253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 56; Significance: 3e-23; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 66700 - 66641
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  66700 caacaaagatattcacgtcaaaccaagttagatccatcaaaacataggttaaatactctt 66641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 167
Target Start/End: Original strand, 59585 - 59697
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtataacaa-cattattttctatatcatacattttccacataaatatatgtatttcacattaacca 153  Q
    ||||||| || | ||||||||||||||| ||||| ||||| || || |||||||||||||||||||||||||||| ||||||||||  |   ||||||||    
T  59585 caacataacaacgttaataataacaactcgaatgatataaaaaacaatattttctatatcatacattttccacat-aatatatgtagcttgaattaacca 59683  T
Q  154 acaacattaattat 167  Q
    ||||||| ||||||    
T  59684 acaacatcaattat 59697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 109458 - 109515
Alignment:
Q  106 tctatatcatacattttccacataaatatatgtatttcacattaaccaacaacattaat 164  Q
    |||| |||||||| ||||||||||| ||||||||| ||| |||||||||||||||||||    
T  109458 tctacatcatacaatttccacataa-tatatgtatctcaaattaaccaacaacattaat 109515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 16638 - 16584
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaata 327  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16638 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaata 16584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 164
Target Start/End: Original strand, 444 - 578
Alignment:
Q  29 agagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtata-acaacattattttctatatcatacattttccaca 127  Q
    |||||||||| |||| | |||||| ||||| ||||| ||| ||||||||||||||  ||| |||| |||| | |||||||||||||||||||||||||||    
T  444 agagacaacaacataaaacaactt-acaacgtagcaacatgaataataacaacttagatgatatacacaataatattttctatatcatacattttccaca 542  T
Q  128 taaatatatgtatttcacattaaccaacaacattaat 164  Q
    | ||||||||||  ||| ||| |||||||||||||||    
T  543 t-aatatatgtagctcaaatttaccaacaacattaat 578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 164
Target Start/End: Original strand, 8699 - 8833
Alignment:
Q  29 agagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtata-acaacattattttctatatcatacattttccaca 127  Q
    |||||||||| |||| | |||||| ||||| ||||| ||| ||||||||||||||  ||| |||| |||| | |||||||||||||||||||||||||||    
T  8699 agagacaacaacataaaacaactt-acaacgtagcaacatgaataataacaacttagatgatatacacaataatattttctatatcatacattttccaca 8797  T
Q  128 taaatatatgtatttcacattaaccaacaacattaat 164  Q
    | ||||||||||  ||| ||| |||||||||||||||    
T  8798 t-aatatatgtagctcaaatttaccaacaacattaat 8833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 16325 - 16381
Alignment:
Q  276 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  16325 caaagatattcacgtcaaaccaagttagattcatcacaacataggttaaatactctt 16381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 2088 - 2013
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggta-taacaacattattttctatatcatacattttccacata 129  Q
    ||||||||||  |||||||||||||||||||||| || |||||||  |||||||||| ||||||||||||||||||    
T  2088 caacatagcaatattaataataacaacttgaatgataataacaacgatattttctatctcatacattttccacata 2013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 159
Target Start/End: Original strand, 33568 - 33701
Alignment:
Q  23 aacaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacatttt 122  Q
    ||||||||||||| || |||||| |||||| | | ||||||| ||||||||||||| ||||| ||||||||||||||||| ||||||||||||||| | |    
T  33568 aacaacagagacatcaacatacaacaacttga-atcatagcaacattaataataaccacttggatggtataacaacatta-tttctatatcatacaatat 33665  T
Q  123 ccacataaatatatgtatttcacattaaccaacaaca 159  Q
     ||||| ||||||||||| ||| ||||  ||||||||    
T  33666 tcacat-aatatatgtatctcaaattattcaacaaca 33701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 315
Target Start/End: Original strand, 33734 - 33776
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaac 315  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  33734 caacaaagatattcacgtcaaaccaaattagatccatcacaac 33776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 589 - 648
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  589 caacaaagatattcacgtcaaaccaaattagatccatcacaaaataggttaaatactctt 648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 161
Target Start/End: Original strand, 426 - 561
Alignment:
Q  23 aacaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacatttt 122  Q
    ||||||||||||| ||  ||||| |||||| | | ||||| | ||||||||||||| ||||| |||||||||||| |||| ||||||||||||||| | |    
T  426 aacaacagagacaccaatatacaacaacttga-atcatagaaacattaataataaccacttggatggtataacaatatta-tttctatatcatacaatat 523  T
Q  123 ccacataaatatatgtatttcacattaaccaacaacatt 161  Q
     ||||| ||||||||||| ||| ||||  ||||||||||    
T  524 tcacat-aatatatgtatctcaaattattcaacaacatt 561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 1095 - 1150
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatac 328  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  1095 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatac 1150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 200
Target Start/End: Original strand, 100 - 143
Alignment:
Q  157 acattaattattaataacatcatataacatcatagttatcaaca 200  Q
    |||||||| |||||||||||||||| ||||||||||||||||||    
T  100 acattaatcattaataacatcatatcacatcatagttatcaaca 143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 12014 - 11955
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  12014 caacaaagatattcatgtcaaaccaagttagatccatcaaaacataggttaaatactctt 11955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 18794 - 18735
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  18794 caacaaagatatttacgttaaaccaagttagatccatcacaacataggttaaatactctt 18735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 36184 - 36125
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  36184 caacaaagatattcacgtcaaacaaagttagattcatcacaacataggttaaatactctt 36125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 187173 - 187118
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatac 328  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  187173 caacaaagatattcacgtcaaaccaaattagatccatcacaacataggttaaatac 187118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 200
Target Start/End: Complemental strand, 188132 - 188089
Alignment:
Q  157 acattaattattaataacatcatataacatcatagttatcaaca 200  Q
    |||||||| |||||||||||||||| ||||||||||||||||||    
T  188132 acattaatcattaataacatcatatcacatcatagttatcaaca 188089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2046 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold2046
Description:

Target: scaffold2046; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 321 - 464
Alignment:
Q  22 caacaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacatt 120  Q
    ||||| ||||||||||| |||| | ||||||  ||||||||||  ||||||||||||||||||||||  |||| ||||  ||||||||||||||||||||    
T  321 caacagcagagacaacaacata-agcaacttg-caacatagcaatattaataataacaacttgaatgaaataaacaacgatattttctatatcatacatt 418  T
Q  121 ttccacataaatatatgtatttcacattaaccaacaacattaattat 167  Q
    |||||||| ||||||| ||  | | ||||||||||||||| ||||||    
T  419 ttccacat-aatatatatagcttaaattaaccaacaacatcaattat 464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 3246 - 3389
Alignment:
Q  22 caacaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacatt 120  Q
    ||||| ||||||||||| |||| || |||||  ||||||||||  ||||| |||||||||||||||| ||||| ||||  ||||||||||||||||||||    
T  3246 caacagcagagacaacaacataaac-aacttg-caacatagcaatattaacaataacaacttgaatgttataaacaacgatattttctatatcatacatt 3343  T
Q  121 ttccacataaatatatgtatttcacattaaccaacaacattaattat 167  Q
    |||||||| ||||||||||  | | ||||||||||||| | ||||||    
T  3344 ttccacat-aatatatgtagcttaaattaaccaacaacgtcaattat 3389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 51; Significance: 3e-20; HSPs: 4)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 273 - 331
Target Start/End: Original strand, 3803 - 3861
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactct 331  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  3803 caacaaagatattcacgtcaaacgaaattagatccatcacaacataggttaaatactct 3861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 139
Target Start/End: Original strand, 11386 - 11491
Alignment:
Q  31 agacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataa 130  Q
    |||||||| |||||| |||||| | | ||||||| ||||||||||||| | ||| ||||||||||||||||| ||||||||||||||| | | ||||| |    
T  11386 agacaacaacatacaacaacttga-accatagcaacattaataataaccatttggatggtataacaacatta-tttctatatcatacaatattcacat-a 11482  T
Q  131 atatatgta 139  Q
    |||||||||    
T  11483 atatatgta 11491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 11547 - 11602
Alignment:
Q  276 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||    
T  11547 caaagatatttacgtcaaaccaa-ttagatccatcacaacataggtcaaatactctt 11602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 157
Target Start/End: Original strand, 3718 - 3808
Alignment:
Q  66 cattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaa 157  Q
    |||||| || ||||||||||||| ||| ||||||| ||||| |||||||||||| | | ||||||| ||||||||||||| |||| |||||||    
T  3718 cattaacaacaacaacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataa-tatatgtatttcaaattatccaacaa 3808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 10887 - 11030
Alignment:
Q  22 caacaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacatt 120  Q
    ||||| ||||||||||| |||| || |||||  |||||||| | ||||||||||||||||||||||| ||| || |||| |||  | |||||||||||||    
T  10887 caacagcagagacaacaacatagac-aacttg-caacatagaaacattaataataacaacttgaatgatataaagaacaatatcatatatatcatacatt 10984  T
Q  121 ttccacataaatatatgtatttcacattaaccaacaacattaattat 167  Q
    |||||||| ||||||||||  ||| ||||||||||||||| ||||||    
T  10985 ttccacat-aatatatgtaactcaaattaaccaacaacatcaattat 11030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 273 - 331
Target Start/End: Original strand, 10095 - 10153
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactct 331  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  10095 caacaaagatattcatgtcaaaccaagttagatccaccacaacataggttaaatactct 10153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 6117 - 6260
Alignment:
Q  22 caacaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacatt 120  Q
    ||||| ||||||||||| |||| || |||||  ||||||||||  ||||||||||| |||||||||| ||||| ||||| || |||||||||||||||||    
T  6117 caacagcagagacaacaacataaac-aacttg-caacatagcaatattaataataataacttgaatgatataaacaacaatactttctatatcatacatt 6214  T
Q  121 ttccacataaatatatgtatttcacattaaccaacaacattaattat 167  Q
    ||||||||||| |||| ||  | | ||||||||||||||| ||||||    
T  6215 ttccacataaa-atatatagcttaaattaaccaacaacatcaattat 6260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 8269 - 8412
Alignment:
Q  22 caacaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacatt 120  Q
    ||||| ||||||||||| |||| || |||||  ||||||||||  ||||||||||| |||||||||| ||||| ||||| || |||||||||||||||||    
T  8269 caacagcagagacaacaacataaac-aacttg-caacatagcaatattaataataataacttgaatgatataaacaacaatactttctatatcatacatt 8366  T
Q  121 ttccacataaatatatgtatttcacattaaccaacaacattaattat 167  Q
    ||||||||||| |||| ||  | | ||||||||||||||| ||||||    
T  8367 ttccacataaa-atatatagcttaaattaaccaacaacatcaattat 8412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 71 - 164
Target Start/End: Complemental strand, 127589 - 127496
Alignment:
Q  71 ataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaacattaat 164  Q
    |||||||||||||||||| ||| ||||||| |||||||||||||||||||||| ||||| ||||||||||  ||| |||||||||||||| ||||    
T  127589 ataataacaacttgaatgatatgaacaacaatattttctatatcatacatttttcacat-aatatatgtagctcaaattaaccaacaacaataat 127496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 7904 - 7960
Alignment:
Q  276 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  7904 caaagatattcacgtcataccaagttagattcatcacaacataggttaaatactctt 7960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 5104 - 5160
Alignment:
Q  276 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  5104 caaagatattcacgtcataccaagttagattcatcacaacataggttaaatactctt 5160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 276 - 328
Target Start/End: Original strand, 1951 - 2003
Alignment:
Q  276 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatac 328  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  1951 caaagatattcacgtcataccaagttagattcatcacaacataggttaaatac 2003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 23 - 159
Target Start/End: Complemental strand, 15343 - 15210
Alignment:
Q  23 aacaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacatttt 122  Q
    ||||||||||||| || |||||| |||||| | | ||||||| ||||||||||||| ||||| ||||||||| ||||||| ||||||||||||||| | |    
T  15343 aacaacagagacatcaacatacaacaacttga-atcatagcaacattaataataaccacttggatggtataaaaacatta-tttctatatcatacaatat 15246  T
Q  123 ccacataaatatatgtatttcacattaaccaacaaca 159  Q
     ||||| ||||||||||| ||| ||||  ||||||||    
T  15245 tcacat-aatatatgtatctcaaattattcaacaaca 15210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 7446 - 7390
Alignment:
Q  276 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  7446 caaagatattcacgtcaaaccaagttatattcatcacaacataggttaaatactctt 7390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 123
Target Start/End: Original strand, 5657 - 5726
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttc 123  Q
    |||||||||| ||| ||||||||||||||||||  ||| ||||| | || ||||||||||||||||||||    
T  5657 caacatagcaacatcaataataacaacttgaattatataaacaataataatttctatatcatacattttc 5726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 281 - 332
Target Start/End: Complemental strand, 3181 - 3130
Alignment:
Q  281 atattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3181 atattcacgtcaaaccaagttagattcatcacaacataggttaaatactctt 3130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 27684 - 27743
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||    
T  27684 caacaaagatattcacgtcaaaccaaattggatccatcacaacatagattaaatactctt 27743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 7604 - 7662
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  7604 caacaaagatattcacatcaaaccaa-ttagatccatcacaacataggttaaatactctt 7662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 14235 - 14293
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  14235 caacaaagatattcacatcaaaccaa-ttagatccatcacaacataggttaaatactctt 14293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 48; Significance: 2e-18; HSPs: 4)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 157
Target Start/End: Complemental strand, 777 - 645
Alignment:
Q  22 caacaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattt 121  Q
    ||||| |||||| | || |||| | ||||||| |||||||||| | |||||||  |||||||| ||| |||||||||||||||||||||||||||| |||    
T  777 caacagcagagagagcaacataaaacaacttc-caacatagcaacgttaataactacaacttggatgatataacaacattattttctatatcataccttt 679  T
Q  122 tccacataaatatatgtatttcacattaaccaacaa 157  Q
    | ||||| ||||||||||| ||| |||| |||||||    
T  678 t-cacat-aatatatgtatctcaaattatccaacaa 645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 157
Target Start/End: Complemental strand, 6081 - 5949
Alignment:
Q  22 caacaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattt 121  Q
    ||||| |||||| | || |||| | ||||||| |||||||||| | |||||||  |||||||| ||| |||||||||||||||||||||||||||| |||    
T  6081 caacagcagagagagcaacataaaacaacttc-caacatagcaacgttaataactacaacttggatgatataacaacattattttctatatcataccttt 5983  T
Q  122 tccacataaatatatgtatttcacattaaccaacaa 157  Q
    | ||||| ||||||||||| ||| |||| |||||||    
T  5982 t-cacat-aatatatgtatctcaaattatccaacaa 5949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 650 - 591
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||| |||||||||||||| |||| ||||||||||||||| |||||| |||||    
T  650 caacaaagatactcacgtcaaaccaaattaggtccatcacaacatagattaaattctctt 591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 5954 - 5895
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||| |||||||||||||| |||| ||||||||||||||| |||||| |||||    
T  5954 caacaaagatactcacgtcaaaccaaattaggtccatcacaacatagattaaattctctt 5895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 78449 - 78507
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  78449 caacaaagatattcacgtcaaaccaa-ttagattcatcacaacataggttaaatactctt 78507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 159
Target Start/End: Original strand, 78322 - 78413
Alignment:
Q  66 cattaataataacaacttgaatggtataacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaaca 159  Q
    ||||||||||||| ||||| ||||||||||||||||| |||||||| |||||| | | ||||| ||||||||||| ||| ||||  ||||||||    
T  78322 cattaataataaccacttggatggtataacaacatta-tttctataccatacaatattcacat-aatatatgtatctcaaattattcaacaaca 78413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 146117 - 146175
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  146117 caacaaagatattcacgtcaaaccaa-ttagatccatcacaacatagattaaatactctt 146175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 159
Target Start/End: Original strand, 145951 - 146084
Alignment:
Q  23 aacaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacatttt 122  Q
    |||||||  ||||||| |||||| |||||| | | | ||||| ||||||||||||| ||||| ||| ||||||||||||| ||||||||||||||| | |    
T  145951 aacaacaatgacaacaacatacaacaacttga-accgtagcaacattaataataaccacttggatgatataacaacatta-tttctatatcatacaatat 146048  T
Q  123 ccacataaatatatgtatttcacattaaccaacaaca 159  Q
     ||||| ||||||||||| ||| ||||| ||||||||    
T  146049 tcacat-aatatatgtatctcaaattaatcaacaaca 146084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 29542 - 29601
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||    
T  29542 caacaaagatattcacgtcaaaccaaattagattcatcacaacataggttagatactctt 29601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 5035 - 5143
Alignment:
Q  22 caacaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacatt 120  Q
    ||||| ||||||||||| |||| | ||||||  ||||||||||  ||||||||||| |||||||||| ||||| ||||| || |||||||||||||||||    
T  5035 caacagcagagacaacaacata-agcaacttg-caacatagcaatattaataataataacttgaatgatataaacaacaatactttctatatcatacatt 5132  T
Q  121 ttccacataaa 131  Q
    |||||||||||    
T  5133 ttccacataaa 5143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 55 - 164
Target Start/End: Original strand, 66253 - 66361
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 153  Q
    ||||||| || |||||||||||||||||| |||| ||| ||||||| || ||||||||||||||| |||||||||  |||||||||| ||| ||||||||    
T  66253 caacataacaacattaataataacaactttaatgatatgaacaacaata-tttctatatcatacaatttccacat-catatatgtatctcaaattaacca 66350  T
Q  154 acaacattaat 164  Q
    |||||| ||||    
T  66351 acaacaataat 66361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 273 - 331
Target Start/End: Original strand, 168821 - 168879
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactct 331  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||    
T  168821 caacaaagatattcacgtcaaaccaaattagaaccatcacaacataagttaaatactct 168879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 279 - 332
Target Start/End: Original strand, 1475 - 1528
Alignment:
Q  279 agatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  1475 agatattcacgtcaaaccaaattagattcatcacaacataggttaaatactctt 1528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 276 - 329
Target Start/End: Complemental strand, 7518 - 7465
Alignment:
Q  276 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatact 329  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  7518 caaagatattcacgtcaaaccaagttagattcatcacaacttaggttaaatact 7465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 167
Target Start/End: Complemental strand, 447 - 335
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 153  Q
    ||||||||||  |||||||||||||||||||||| ||| ||||||  || ||||||||||||||||||| |||||||| |||| ||  | | ||||||||    
T  447 caacatagcaatattaataataacaacttgaatgatataaacaacgatactttctatatcatacatttttcacataaa-atatatagcttaaattaacca 349  T
Q  154 acaacattaattat 167  Q
    ||||||| ||||||    
T  348 acaacatcaattat 335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 67 - 167
Target Start/End: Complemental strand, 41023 - 40923
Alignment:
Q  67 attaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaacattaatt 165  Q
    |||||||||||||||||||||| ||||| ||||  || |||||||||||||||||||||||||||| |||| ||  | | ||||||||||||||| ||||    
T  41023 attaataataacaacttgaatgatataaacaacgatactttctatatcatacattttccacataaa-atatatagcttaaattaaccaacaacatcaatt 40925  T
Q  166 at 167  Q
    ||    
T  40924 at 40923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 273 - 330
Target Start/End: Complemental strand, 10597 - 10541
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactc 330  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  10597 caacaaagatattcacgtcaaaccaa-ttagatccatcacaacgtaggttaaatactc 10541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 45; Significance: 1e-16; HSPs: 4)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 159
Target Start/End: Original strand, 7193 - 7326
Alignment:
Q  23 aacaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacatttt 122  Q
    ||||||||||||| || |||||| |||||| | | ||||||| ||||||||||||| ||||| ||||||||||||||||| |||| |||||||||| | |    
T  7193 aacaacagagacagcaacatacaacaacttga-atcatagcaacattaataataaccacttggatggtataacaacatta-tttccatatcatacaatat 7290  T
Q  123 ccacataaatatatgtatttcacattaaccaacaaca 159  Q
     ||||| ||| ||||||| ||| ||||  ||||||||    
T  7291 tcacat-aatttatgtatctcaaattattcaacaaca 7326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 11179 - 11238
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||| ||||||||||||||||| |||||| ||||||||||||||||| ||||||||    
T  11179 caacaaagctattcacgtcaaaccaaattagattcatcacaacataggttagatactctt 11238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 159
Target Start/End: Original strand, 11013 - 11146
Alignment:
Q  23 aacaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacatttt 122  Q
    ||||||||||| | || |||||| |||||| | | ||||||| ||||||||||||| ||||  ||||||||||||||||| ||||||| ||||||| | |    
T  11013 aacaacagagaaagcaacatacaacaacttga-atcatagcaacattaataataaccacttcgatggtataacaacatta-tttctatgtcatacaatat 11110  T
Q  123 ccacataaatatatgtatttcacattaaccaacaaca 159  Q
     ||||| ||||||||||| ||| ||||  ||||||||    
T  11111 tcacat-aatatatgtatctcaaattattcaacaaca 11146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 7359 - 7418
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||| ||||| |||||| ||||||| ||||||||  ||||||||    
T  7359 caacaaagatattcacgtcagaccaaattagattcatcacagcataggtttgatactctt 7418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 34652 - 34708
Alignment:
Q  276 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  34652 caaagatactcacgtcaaaccaagatagattcatcacaacataggttaaatactctt 34708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 45; Significance: 1e-16; HSPs: 4)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 159
Target Start/End: Complemental strand, 6114 - 5981
Alignment:
Q  23 aacaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacatttt 122  Q
    ||||||||||||| || |||||| |||||| | | ||||||| ||||||||||||| ||||| ||||||||||||||||| |||| |||||||||| | |    
T  6114 aacaacagagacagcaacatacaacaacttga-atcatagcaacattaataataaccacttggatggtataacaacatta-tttccatatcatacaatat 6017  T
Q  123 ccacataaatatatgtatttcacattaaccaacaaca 159  Q
     ||||| ||| ||||||| ||| ||||  ||||||||    
T  6016 tcacat-aatttatgtatctcaaattattcaacaaca 5981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 645 - 586
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||| ||||||||||||||||| |||||| ||||||||||||||||| ||||||||    
T  645 caacaaagctattcacgtcaaaccaaattagattcatcacaacataggttagatactctt 586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 159
Target Start/End: Complemental strand, 811 - 678
Alignment:
Q  23 aacaacagagacaacatcatacaccaacttcacaacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacatttt 122  Q
    ||||||||||| | || |||||| |||||| | | ||||||| ||||||||||||| ||||  ||||||||||||||||| ||||||| ||||||| | |    
T  811 aacaacagagaaagcaacatacaacaacttga-atcatagcaacattaataataaccacttcgatggtataacaacatta-tttctatgtcatacaatat 714  T
Q  123 ccacataaatatatgtatttcacattaaccaacaaca 159  Q
     ||||| ||||||||||| ||| ||||  ||||||||    
T  713 tcacat-aatatatgtatctcaaattattcaacaaca 678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 5948 - 5889
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||| ||||| |||||| ||||||| ||||||||  ||||||||    
T  5948 caacaaagatattcacgtcagaccaaattagattcatcacagcataggtttgatactctt 5889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 130
Target Start/End: Original strand, 8311 - 8375
Alignment:
Q  67 attaataataacaacttgaatggta-taacaacattattttctatatcatacattttccacataa 130  Q
    |||||||||||||||||||||| || |||||||  ||||||||||||||||||||||||||||||    
T  8311 attaataataacaacttgaatgataataacaacgatattttctatatcatacattttccacataa 8375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1539 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold1539
Description:

Target: scaffold1539; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 1291 - 1350
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||| ||||||||| ||||||||| ||||||||||||| |||||||||||||||||||    
T  1291 caacaaggatattcacatcaaaccaaattagatccatcaccacataggttaaatactctt 1350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 13333 - 13274
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||| |||||| ||||||||||||||||| | |||||||||||||    
T  13333 caacaaagatattcacgtccaaccaaattagatccatcacaacacatgttaaatactctt 13274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 6897 - 6956
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||| |||||| ||||||||||||||||| | |||||||||||||    
T  6897 caacaaagatattcacgtccaaccaaattagatccatcacaacacatgttaaatactctt 6956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 29996 - 30055
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||||||||| |||||| |||||||||||| |||| ||||||||    
T  29996 caacaaagatattcacgtcaaaccaaattagattcatcacaacataagttagatactctt 30055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 120294 - 120353
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||| |||||| ||||||||||||||||| | |||||||||||||    
T  120294 caacaaagatattcacgtccaaccaaattagatccatcacaacacatgttaaatactctt 120353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 142997 - 143056
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||| ||||||||| ||||||||| ||||||||||||| |||||||||||||||||||    
T  142997 caacaaggatattcacatcaaaccaaattagatccatcaccacataggttaaatactctt 143056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 25900 - 25959
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||| || | ||||||| |||||||||||||||||||||||||||||||||    
T  25900 caacaaagatatttacataaaaccaaattagatccatcacaacataggttaaatactctt 25959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 279 - 329
Target Start/End: Original strand, 7523 - 7573
Alignment:
Q  279 agatattcacgtcaaaccaagttagatccatcacaacataggttaaatact 329  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  7523 agatattcacgtcaaaccaaattagattcatcacaacataggttaaatact 7573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 279 - 329
Target Start/End: Complemental strand, 29030 - 28980
Alignment:
Q  279 agatattcacgtcaaaccaagttagatccatcacaacataggttaaatact 329  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  29030 agatattcacgtcaaaccaaattagattcatcacaacataggttaaatact 28980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 279 - 332
Target Start/End: Original strand, 9445 - 9498
Alignment:
Q  279 agatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||| ||||    
T  9445 agatattcacgtcaaaccaaattagattcatcacaacataggttaaataatctt 9498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 279 - 332
Target Start/End: Original strand, 21123 - 21176
Alignment:
Q  279 agatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||||||||||||||| |||||  ||||||||||||||||||||||||||    
T  21123 agatattcacgtcaaaccaaattagactcatcacaacataggttaaatactctt 21176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1815 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1815
Description:

Target: scaffold1815; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 118
Target Start/End: Original strand, 1268 - 1327
Alignment:
Q  58 catagcatcattaataataacaacttgaatggtataacaacattattttctatatcataca 118  Q
    ||||||| ||||||||||||| ||||| ||||||||||||||||| |||||||||||||||    
T  1268 catagcaacattaataataaccacttggatggtataacaacatta-tttctatatcataca 1327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0825 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0825
Description:

Target: scaffold0825; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 130
Target Start/End: Complemental strand, 1613 - 1549
Alignment:
Q  67 attaataataacaacttgaatggta-taacaacattattttctatatcatacattttccacataa 130  Q
    |||||||||||||||||||||| || |||||||  |||||||||||||| |||||||||||||||    
T  1613 attaataataacaacttgaatgataataacaacgatattttctatatcaaacattttccacataa 1549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 130
Target Start/End: Original strand, 2960 - 3024
Alignment:
Q  67 attaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataa 130  Q
    |||||||||||||||||||||| ||||| ||||  |||||||||||||||||||||||| |||||    
T  2960 attaataataacaacttgaatgatataaacaacgatattttctatatcatacattttcctcataa 3024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0429 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 130
Target Start/End: Complemental strand, 2800 - 2724
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataa 130  Q
    ||||||||||  ||||| |||||||||||||||| ||||| |||   ||||||||||||||||||||||||||||||    
T  2800 caacatagcaatattaaaaataacaacttgaatgatataaacaatgatattttctatatcatacattttccacataa 2724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 18552 - 18608
Alignment:
Q  276 caaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||||| || ||||| |||||||||||| |||||||||||||    
T  18552 caaagatattcacgtcaaaccgagatagattcatcacaacatatgttaaatactctt 18608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 130
Target Start/End: Original strand, 6053 - 6117
Alignment:
Q  67 attaataataacaacttgaatggta-taacaacattattttctatatcatacattttccacataa 130  Q
    |||||||||||||||||||||| || |||||||  |||||||||||||| |||||||||||||||    
T  6053 attaataataacaacttgaatgataataacaacgatattttctatatcacacattttccacataa 6117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 273 - 329
Target Start/End: Original strand, 21036 - 21092
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatact 329  Q
    ||||||||||||||||||| |||||| ||||||||||||||||| | ||||||||||    
T  21036 caacaaagatattcacgtccaaccaaattagatccatcacaacacatgttaaatact 21092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 164
Target Start/End: Complemental strand, 2727 - 2633
Alignment:
Q  71 ataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttc-acattaaccaacaacattaat 164  Q
    |||||||| | ||||||| ||| ||||||| |||||||||||||||||| ||||||||| ||||||||||| || | ||||||||||| |||||||    
T  2727 ataataacgatttgaatgatatgaacaacaatattttctatatcatacaatttccacat-aatatatgtatctcaaaattaaccaacatcattaat 2633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 21452 - 21511
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||||| |||||| |||||||||| |||||| | |||||||||||||    
T  21452 caacaaagatattcacgtccaaccaaattagatccattacaacacatgttaaatactctt 21511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 945 - 991
Alignment:
Q  154 acaacattaattattaataacatcatataacatcatagttatcaaca 200  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||    
T  945 acaacattaatcatcaataacatcatataacatcatagttatcaaca 991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 123
Target Start/End: Original strand, 8304 - 8373
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttc 123  Q
    |||||||||| ||| ||||||||||||||||||| ||| ||||| | || ||||||||||||||||||||    
T  8304 caacatagcaacatcaataataacaacttgaatgatataaacaataataatttctatatcatacattttc 8373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 123
Target Start/End: Original strand, 20889 - 20958
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttc 123  Q
    |||||||||| ||| ||||||||||||||||||| ||| ||||| | || ||||||||||||||||||||    
T  20889 caacatagcaacatcaataataacaacttgaatgatataaacaataataatttctatatcatacattttc 20958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 167
Target Start/End: Original strand, 3120 - 3232
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 153  Q
    ||||||||||  |||||||| ||||||||||||| ||||| ||||   ||||||||||||||||||||||| ||| ||||||| ||  | | ||||||||    
T  3120 caacatagcaatattaataacaacaacttgaatgatataaacaacgacattttctatatcatacattttccccat-aatatatatagcttaaattaacca 3218  T
Q  154 acaacattaattat 167  Q
    ||| ||| ||||||    
T  3219 acatcatcaattat 3232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 317
Target Start/End: Original strand, 49243 - 49284
Alignment:
Q  276 caaagatattcacgtcaaaccaagttagatccatcacaacat 317  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  49243 caaagatattcacgtcaaaccaagttagattcatcacaacat 49284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 198
Target Start/End: Original strand, 40231 - 40272
Alignment:
Q  157 acattaattattaataacatcatataacatcatagttatcaa 198  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  40231 acattaatcattaataacatcatataacatcatagttatcaa 40272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 281 - 332
Target Start/End: Original strand, 126140 - 126191
Alignment:
Q  281 atattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||||| || |||||| ||||||||||||||||| | |||||||||||||    
T  126140 atattcacatccaaccaaattagatccatcacaacacatgttaaatactctt 126191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 54 - 121
Target Start/End: Complemental strand, 1340 - 1272
Alignment:
Q  54 acaacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattt 121  Q
    |||||||||||  |||||||||||||||||||||| ||| ||||||  |||||| ||||||||||||||    
T  1340 acaacatagcaatattaataataacaacttgaatgatataaacaacgatattttatatatcatacattt 1272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 273 - 329
Target Start/End: Complemental strand, 5994 - 5938
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatact 329  Q
    |||||||||||||||||||  ||||| ||||||||||||||||| | ||||||||||    
T  5994 caacaaagatattcacgtccgaccaaattagatccatcacaacacatgttaaatact 5938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 53446 - 53378
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtataacaacattattttctatatcatacattttc 123  Q
    |||||||||| ||| ||||||||||||||||||| ||||| || | || |||| |||||||||||||||    
T  53446 caacatagcaacatcaataataacaacttgaatgatataaaaataataatttccatatcatacattttc 53378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 7257 - 7198
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||| ||||||||| | ||||||| ||||||||||||| || ||||||||||||||||    
T  7257 caacaaggatattcacatgaaaccaaattagatccatcaccacgtaggttaaatactctt 7198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 2502 - 2443
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    |||||| ||||||||| ||||||||| ||||||||||||| |  ||||||||||||||||    
T  2502 caacaaggatattcacatcaaaccaaattagatccatcaccatttaggttaaatactctt 2443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 7175 - 7116
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||| ||||| |||| | ||||  |||||||||||||||||||||||||    
T  7175 caacaaagatattcatgtcaatccaaatgagatttatcacaacataggttaaatactctt 7116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 121
Target Start/End: Original strand, 16004 - 16071
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattt 121  Q
    |||||||||| ||| ||||||||||||||||||| ||| ||||| | || ||||||||||||||||||    
T  16004 caacatagcaacatcaataataacaacttgaatgatataaacaataataatttctatatcatacattt 16071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 121
Target Start/End: Original strand, 13186 - 13253
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattt 121  Q
    |||||||| | ||| ||||||||||||||||||| ||| ||||| | || ||||||||||||||||||    
T  13186 caacatagaaacatcaataataacaacttgaatgatataaacaataataatttctatatcatacattt 13253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 164
Target Start/End: Complemental strand, 136416 - 136319
Alignment:
Q  66 cattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaacattaat 164  Q
    ||||||||| ||||||||||||| ||| ||||||| ||||| |||||||||||| ||| ||||| ||||||||||| ||| |||| ||||| ||| ||||    
T  136416 cattaataacaacaacttgaatgatatgaacaacaatattt-ctatatcatacaattttcacat-aatatatgtatctcaaattatccaactacaataat 136319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 130
Target Start/End: Complemental strand, 12320 - 12244
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataa 130  Q
    ||||||||||  |||||||||||||| ||||||| ||| ||||||  |||||||||||||| |||||| || |||||    
T  12320 caacatagcaatattaataataacaatttgaatgatataaacaacgatattttctatatcacacatttccctcataa 12244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 164
Target Start/End: Original strand, 95542 - 95636
Alignment:
Q  70 aataataacaacttgaatggtataa-caacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaacattaat 164  Q
    |||||||||| |||||||| ||||| ||| | || |||||||||||  ||| |||||||||| |||| ||||||||||||||  ||||||||||||    
T  95542 aataataacatcttgaatgatataagcaataataatttctatatcaaccatcttccacataa-tataagtatttcacattaagtaacaacattaat 95636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 3654 - 3708
Alignment:
Q  273 caacaaagatattcacgtcaaaccaagttagatccatcacaacataggttaaata 327  Q
    |||||||||||||||||||  ||||| ||||||||||||||||| | ||||||||    
T  3654 caacaaagatattcacgtccgaccaaattagatccatcacaacacatgttaaata 3708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 19456 - 19387
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttc 123  Q
    |||||||| | ||| ||||||||||||||||||| ||| ||||| | || ||||||||||||||||||||    
T  19456 caacatagaaacatcaataataacaacttgaatgatataaacaataataatttctatatcatacattttc 19387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 200
Target Start/End: Complemental strand, 712 - 672
Alignment:
Q  160 ttaattattaataacatcatataacatcatagttatcaaca 200  Q
    ||||| |||||||||||||||| ||||||||||||||||||    
T  712 ttaatcattaataacatcatatcacatcatagttatcaaca 672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 332
Target Start/End: Complemental strand, 20723 - 20683
Alignment:
Q  292 aaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||| |||||||||||||||| ||||||||||||||    
T  20723 aaaccaagtcagatccatcacaacattggttaaatactctt 20683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 200
Target Start/End: Complemental strand, 66482 - 66442
Alignment:
Q  160 ttaattattaataacatcatataacatcatagttatcaaca 200  Q
    ||||| |||||||||||||||| ||||||||||||||||||    
T  66482 ttaatcattaataacatcatatcacatcatagttatcaaca 66442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 332
Target Start/End: Complemental strand, 7995 - 7955
Alignment:
Q  292 aaaccaagttagatccatcacaacataggttaaatactctt 332  Q
    ||||||||||||||||| ||||||| |||||||||||||||    
T  7995 aaaccaagttagatccaccacaacagaggttaaatactctt 7955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0645 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0645
Description:

Target: scaffold0645; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 157 - 200
Target Start/End: Complemental strand, 700 - 657
Alignment:
Q  157 acattaattattaataacatcatataacatcatagttatcaaca 200  Q
    |||||||| ||||||||||||| |||||||||||||||| ||||    
T  700 acattaatcattaataacatcacataacatcatagttattaaca 657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 161
Target Start/End: Complemental strand, 3898 - 3793
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 153  Q
    ||||||| || |||||| || |||||| |||||| ||| ||||||| ||||| |||||||||| ||| | ||||||| ||||||||| ||| |||| |||    
T  3898 caacataacaacattaacaacaacaacctgaatgatatgaacaacaatattt-ctatatcatatattattcacataa-tatatgtatctcaaattatcca 3801  T
Q  154 acaacatt 161  Q
    ||||||||    
T  3800 acaacatt 3793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 200
Target Start/End: Complemental strand, 4346 - 4304
Alignment:
Q  158 cattaattattaataacatcatataacatcatagttatcaaca 200  Q
    |||||||||| || ||||||||||||||||||| |||||||||    
T  4346 cattaattatgaacaacatcatataacatcatatttatcaaca 4304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 200
Target Start/End: Complemental strand, 8906 - 8864
Alignment:
Q  158 cattaattattaataacatcatataacatcatagttatcaaca 200  Q
    |||||||||| || ||||||||||||||||||| |||||||||    
T  8906 cattaattatgaacaacatcatataacatcatatttatcaaca 8864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 164
Target Start/End: Original strand, 16846 - 16954
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaacca 153  Q
    ||||||| || ||||||||| |||||||| |||| ||| ||||| | ||||| |||||||| ||| ||| ||||||| ||||||||| ||| |||| |||    
T  16846 caacataacaacattaataacaacaacttaaatgatatgaacaagaatattt-ctatatcaaacaattttcacataa-tatatgtatctcaaattatcca 16943  T
Q  154 acaacattaat 164  Q
    |||||| ||||    
T  16944 acaacaataat 16954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 200
Target Start/End: Complemental strand, 18565 - 18523
Alignment:
Q  158 cattaattattaataacatcatataacatcatagttatcaaca 200  Q
    |||||||||| || ||||||||||||||||||| |||||||||    
T  18565 cattaattatgaacaacatcatataacatcatatttatcaaca 18523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 200
Target Start/End: Complemental strand, 24846 - 24797
Alignment:
Q  153 aacaacattaattat--taataacatcatataacatcatagttatcaaca 200  Q
    |||||||||||| ||  |||||||||| ||||||||||||||||||||||    
T  24846 aacaacattaatcatcttaataacatcgtataacatcatagttatcaaca 24797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 1696 - 1749
Alignment:
Q  24 acaacagagacaacatcatacaccaacttcacaacatagcatcattaataataa 77  Q
    |||||||||| | ||  ||||| |||||| ||||||||||||||||||||||||    
T  1696 acaacagagatagcaaaatacaacaacttaacaacatagcatcattaataataa 1749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1695 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1695
Description:

Target: scaffold1695; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 159
Target Start/End: Original strand, 625 - 707
Alignment:
Q  76 aacaacttgaatggtat-aacaacattattttctatatcatacattttccacataaatatatgtatttcacattaaccaacaaca 159  Q
    ||||||||||||| ||| ||||||| ||||| |||||||||||| | | ||||||| ||||||||| ||| |||| |||||||||    
T  625 aacaacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataa-tatatgtatctcaaattatccaacaaca 707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1278 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1278
Description:

Target: scaffold1278; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 328
Target Start/End: Original strand, 857 - 893
Alignment:
Q  292 aaaccaagttagatccatcacaacataggttaaatac 328  Q
    |||||||||||||||||||| | ||||||||||||||    
T  857 aaaccaagttagatccatcatatcataggttaaatac 893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 130
Target Start/End: Complemental strand, 3755 - 3679
Alignment:
Q  55 caacatagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacattttccacataa 130  Q
    ||||||||||  |||| |||||||||||| |||| ||| ||||||  |||||||||||||| |||||| || |||||    
T  3755 caacatagcaatattagtaataacaacttaaatgatataaacaacgatattttctatatcacacatttccctcataa 3679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 200
Target Start/End: Complemental strand, 598 - 570
Alignment:
Q  172 aacatcatataacatcatagttatcaaca 200  Q
    |||||||||||||||||||||||||||||    
T  598 aacatcatataacatcatagttatcaaca 570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 332
Target Start/End: Complemental strand, 22432 - 22400
Alignment:
Q  300 ttagatccatcacaacataggttaaatactctt 332  Q
    |||||||| ||||||||||||||||||||||||    
T  22432 ttagatccttcacaacataggttaaatactctt 22400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University