View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5706_low_46 (Length: 258)

Name: NF5706_low_46
Description: NF5706
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5706_low_46
NF5706_low_46
[»] chr5 (9 HSPs)
chr5 (1-179)||(38144542-38144720)
chr5 (1-179)||(28370060-28370238)
chr5 (1-179)||(19512257-19512436)
chr5 (1-173)||(22751018-22751191)
chr5 (1-105)||(23528577-23528680)
chr5 (1-60)||(18407949-18408008)
chr5 (1-60)||(23111205-23111264)
chr5 (1-51)||(22438753-22438803)
chr5 (1-50)||(19236900-19236949)
[»] scaffold0026 (2 HSPs)
scaffold0026 (1-179)||(111557-111735)
scaffold0026 (1-173)||(11856-12029)
[»] chr8 (13 HSPs)
chr8 (1-179)||(44477494-44477672)
chr8 (1-179)||(44492652-44492830)
chr8 (1-179)||(8727738-8727917)
chr8 (1-173)||(23866491-23866664)
chr8 (87-179)||(27940946-27941038)
chr8 (1-105)||(17054537-17054640)
chr8 (1-60)||(23482058-23482117)
chr8 (1-52)||(18614271-18614322)
chr8 (1-52)||(39364919-39364970)
chr8 (1-50)||(29643391-29643440)
chr8 (1-51)||(14056569-14056619)
chr8 (1-51)||(25111976-25112026)
chr8 (1-50)||(24320676-24320725)
[»] chr3 (21 HSPs)
chr3 (1-179)||(9534199-9534377)
chr3 (1-179)||(23370511-23370690)
chr3 (1-173)||(14762763-14762936)
chr3 (1-173)||(20247794-20247967)
chr3 (1-175)||(24192830-24193006)
chr3 (1-173)||(38310805-38310978)
chr3 (1-177)||(55499107-55499285)
chr3 (1-105)||(24933834-24933937)
chr3 (1-176)||(16801473-16801648)
chr3 (1-77)||(41455103-41455178)
chr3 (1-57)||(18929239-18929295)
chr3 (1-60)||(17240518-17240577)
chr3 (1-50)||(13302246-13302295)
chr3 (1-50)||(13323793-13323842)
chr3 (1-50)||(12033450-12033499)
chr3 (1-50)||(13312902-13312951)
chr3 (1-50)||(17131732-17131781)
chr3 (1-50)||(51301589-51301638)
chr3 (1-105)||(10389449-10389553)
chr3 (1-105)||(10414538-10414642)
chr3 (1-105)||(10421208-10421312)
[»] chr2 (14 HSPs)
chr2 (1-179)||(6483589-6483767)
chr2 (1-179)||(6487056-6487234)
chr2 (1-176)||(19661459-19661634)
chr2 (1-176)||(26583702-26583876)
chr2 (1-179)||(23089060-23089239)
chr2 (1-179)||(23101468-23101647)
chr2 (1-179)||(23878879-23879057)
chr2 (1-105)||(5706029-5706133)
chr2 (1-60)||(23265133-23265192)
chr2 (1-60)||(23280201-23280260)
chr2 (1-57)||(21908353-21908409)
chr2 (1-52)||(24661576-24661627)
chr2 (1-50)||(10577-10626)
chr2 (1-50)||(25180935-25180984)
[»] chr7 (21 HSPs)
chr7 (1-176)||(14422858-14423034)
chr7 (1-179)||(16009448-16009626)
chr7 (1-173)||(10895796-10895969)
chr7 (1-173)||(15168052-15168225)
chr7 (1-173)||(18873237-18873410)
chr7 (1-173)||(12709849-12710022)
chr7 (1-173)||(13122920-13123093)
chr7 (1-175)||(13743584-13743758)
chr7 (1-176)||(16677167-16677345)
chr7 (1-176)||(17651403-17651581)
chr7 (1-172)||(12590649-12590818)
chr7 (1-105)||(13007378-13007481)
chr7 (1-51)||(11382876-11382926)
chr7 (1-51)||(11389353-11389403)
chr7 (1-51)||(20311057-20311107)
chr7 (1-51)||(21230965-21231015)
chr7 (1-59)||(13679485-13679543)
chr7 (1-52)||(46625961-46626012)
chr7 (1-50)||(2971254-2971303)
chr7 (1-50)||(11311059-11311108)
chr7 (1-50)||(20906467-20906516)
[»] scaffold0553 (1 HSPs)
scaffold0553 (1-179)||(10201-10380)
[»] scaffold0544 (1 HSPs)
scaffold0544 (1-179)||(1531-1710)
[»] chr6 (21 HSPs)
chr6 (1-179)||(23839069-23839248)
chr6 (1-176)||(4477731-4477907)
chr6 (1-179)||(10986186-10986365)
chr6 (1-173)||(29614152-29614325)
chr6 (1-173)||(23057815-23057988)
chr6 (1-176)||(18800311-18800487)
chr6 (1-129)||(930101-930229)
chr6 (1-179)||(21565217-21565396)
chr6 (1-105)||(12168309-12168412)
chr6 (1-105)||(19287218-19287321)
chr6 (1-105)||(19785875-19785978)
chr6 (1-105)||(19878402-19878505)
chr6 (3-105)||(19884178-19884279)
chr6 (1-78)||(34646666-34646743)
chr6 (1-78)||(34639992-34640069)
chr6 (1-101)||(25469710-25469808)
chr6 (3-51)||(24512851-24512899)
chr6 (1-48)||(9187498-9187545)
chr6 (1-52)||(25348486-25348537)
chr6 (1-52)||(25598643-25598694)
chr6 (1-52)||(25397172-25397223)
[»] chr1 (12 HSPs)
chr1 (1-179)||(20437029-20437208)
chr1 (1-105)||(41111981-41112084)
chr1 (1-60)||(32651563-32651622)
chr1 (4-60)||(18712790-18712846)
chr1 (1-51)||(19663522-19663572)
chr1 (1-52)||(10811788-10811839)
chr1 (1-52)||(20805320-20805371)
chr1 (1-51)||(11158093-11158143)
chr1 (1-50)||(20851138-20851187)
chr1 (1-50)||(20857765-20857814)
chr1 (1-50)||(21706276-21706325)
chr1 (1-50)||(21710818-21710867)
[»] scaffold0029 (1 HSPs)
scaffold0029 (1-173)||(111758-111932)
[»] scaffold1773 (1 HSPs)
scaffold1773 (1-173)||(1055-1227)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-173)||(50056-50228)
[»] scaffold0025 (1 HSPs)
scaffold0025 (1-175)||(14401-14577)
[»] scaffold0247 (1 HSPs)
scaffold0247 (1-179)||(11212-11391)
[»] scaffold0924 (1 HSPs)
scaffold0924 (1-173)||(756-930)
[»] scaffold0058 (1 HSPs)
scaffold0058 (1-175)||(167-340)
[»] scaffold0117 (2 HSPs)
scaffold0117 (1-172)||(8580-8751)
scaffold0117 (1-172)||(1903-2074)
[»] chr4 (11 HSPs)
chr4 (1-172)||(8045838-8046009)
chr4 (1-173)||(11847984-11848163)
chr4 (1-105)||(53483650-53483754)
chr4 (1-51)||(15408139-15408189)
chr4 (1-52)||(8834895-8834946)
chr4 (1-52)||(13888641-13888692)
chr4 (1-52)||(22724691-22724742)
chr4 (1-50)||(14486661-14486710)
chr4 (1-52)||(15245215-15245266)
chr4 (1-52)||(15308120-15308171)
chr4 (1-50)||(27906266-27906315)
[»] scaffold0154 (1 HSPs)
scaffold0154 (1-176)||(30730-30907)
[»] scaffold0476 (1 HSPs)
scaffold0476 (1-179)||(3298-3478)
[»] scaffold0090 (1 HSPs)
scaffold0090 (1-175)||(18043-18219)
[»] scaffold0077 (1 HSPs)
scaffold0077 (1-179)||(3627-3806)
[»] scaffold0796 (2 HSPs)
scaffold0796 (1-105)||(1738-1841)
scaffold0796 (1-105)||(5761-5864)
[»] scaffold0456 (2 HSPs)
scaffold0456 (1-78)||(904-981)
scaffold0456 (1-78)||(8049-8126)
[»] scaffold0129 (1 HSPs)
scaffold0129 (1-105)||(45280-45384)
[»] scaffold0222 (1 HSPs)
scaffold0222 (1-60)||(16811-16870)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-60)||(116887-116946)
[»] scaffold0461 (1 HSPs)
scaffold0461 (1-60)||(13-72)
[»] scaffold0146 (1 HSPs)
scaffold0146 (1-60)||(13623-13682)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-60)||(101933-101992)
[»] scaffold0310 (1 HSPs)
scaffold0310 (1-51)||(17643-17693)
[»] scaffold0107 (1 HSPs)
scaffold0107 (1-51)||(40537-40587)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-51)||(135473-135523)
[»] scaffold0235 (1 HSPs)
scaffold0235 (1-49)||(22598-22646)
[»] scaffold0124 (1 HSPs)
scaffold0124 (1-51)||(34281-34331)
[»] scaffold0138 (1 HSPs)
scaffold0138 (1-52)||(12296-12347)
[»] scaffold0317 (1 HSPs)
scaffold0317 (1-59)||(1378-1436)
[»] scaffold0139 (1 HSPs)
scaffold0139 (1-51)||(15002-15052)
[»] scaffold0815 (1 HSPs)
scaffold0815 (1-47)||(1453-1499)
[»] scaffold1318 (1 HSPs)
scaffold1318 (1-50)||(1918-1967)
[»] scaffold0348 (1 HSPs)
scaffold0348 (1-50)||(9336-9385)
[»] scaffold0127 (1 HSPs)
scaffold0127 (1-50)||(10239-10288)
[»] scaffold0023 (1 HSPs)
scaffold0023 (1-50)||(135438-135487)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-50)||(493034-493082)


Alignment Details
Target: chr5 (Bit Score: 171; Significance: 6e-92; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 38144542 - 38144720
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38144542 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatga 38144641  T
Q  101 tgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 179  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38144642 tgattctgaggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 38144720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 28370060 - 28370238
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  28370060 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgatga 28370159  T
Q  101 tgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 179  Q
    ||||| ||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  28370160 tgattttgaggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactg 28370238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 19512436 - 19512257
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataatttt-ggaaaataaattgagggttagggtttgatg 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||||    
T  19512436 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttgatg 19512337  T
Q  100 atgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 179  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19512336 atgattttgaggggaatgggtattgatcatgttaattctattgtaacgtaatgtttagaatgaaaacttaatctatactg 19512257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 22751191 - 22751018
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatga 100  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  22751191 taagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgatga 22751092  T
Q  101 tgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 173  Q
    ||||| || ||||  ||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  22751091 tgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 22751018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 23528680 - 23528577
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||  |||  |||||||||||||||    
T  23528680 taagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggtttgatga 23528582  T
Q  101 tgatt 105  Q
    |||||    
T  23528581 tgatt 23528577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 18407949 - 18408008
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 60  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  18407949 taagggtgagactatctctcaataatcataatatataatttctgaaaattgatctaattg 18408008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 23111205 - 23111264
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 60  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  23111205 taagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23111264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 22438753 - 22438803
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattg 51  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22438753 taagggtgagactatctctcaataatcataatgtataatttctgaaaattg 22438803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 19236949 - 19236900
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaatt 50  Q
    |||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  19236949 taagggtgggattatctttcaatagtcataatatataatttctgaaaatt 19236900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 163; Significance: 4e-87; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 111735 - 111557
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  111735 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgatga 111636  T
Q  101 tgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 179  Q
    ||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  111635 tgattctgaggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactg 111557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 11856 - 12029
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  11856 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagagttagggtttgatga 11955  T
Q  101 tgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 173  Q
    ||||| || ||||  ||||||| |||||||||||||||| ||||||| |||| || ||||||||||||||||||    
T  11956 tgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatcttcagaatgaaaacttaatct 12029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 159; Significance: 9e-85; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 44477672 - 44477494
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  44477672 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgatga 44477573  T
Q  101 tgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 179  Q
    ||||| ||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  44477572 tgattttgaggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactg 44477494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 44492830 - 44492652
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  44492830 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgatga 44492731  T
Q  101 tgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 179  Q
    ||||| ||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  44492730 tgattttgaggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactg 44492652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 8727738 - 8727917
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataatttt-ggaaaataaattgagggttagggtttgatg 99  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||| |    
T  8727738 taagggtgagattatccctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttgacg 8727837  T
Q  100 atgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 179  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  8727838 atgattctgaggggtatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactg 8727917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 23866664 - 23866491
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatga 100  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  23866664 taagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttagggtttgatga 23866566  T
Q  101 tgattatg-aggggtatgggtattgatcatgttaattcta-ttgtaatgtaatgtttagaatgaaaacttaatct 173  Q
    |||||||| || |  ||||||| ||||||||||||||||| ||||||| ||||||| |||||  |||||||||||    
T  23866565 tgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatct 23866491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 87 - 179
Target Start/End: Original strand, 27940946 - 27941038
Alignment:
Q  87 ttagggtttgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 179  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||    
T  27940946 ttagggtttgatgatgattctgaggggaatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaatttaatctatactg 27941038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 17054640 - 17054537
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatga 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||| |||||||||||||  |||  |||||||||||||||    
T  17054640 taagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggtttgatga 17054542  T
Q  101 tgatt 105  Q
    |||||    
T  17054541 tgatt 17054537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 23482058 - 23482117
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 60  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  23482058 taagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23482117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 18614322 - 18614271
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattga 52  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  18614322 taagggtgagactatctctcaataatcatgatatataatttctgaaaattga 18614271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 39364970 - 39364919
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattga 52  Q
    |||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  39364970 taagggtgagactatctctcaataataatagtatagaatttctgaaaattga 39364919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 29643391 - 29643440
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaatt 50  Q
    ||||||||||| ||||| |||||||||||||| | |||||||||||||||    
T  29643391 taagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 29643440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 14056569 - 14056619
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattg 51  Q
    |||||||||||||||||||||||||| ||| | | ||| ||||||||||||    
T  14056569 taagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 14056619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 25112026 - 25111976
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattg 51  Q
    |||||||||||||||||||||||||| ||| | | ||| ||||||||||||    
T  25112026 taagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 25111976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 24320676 - 24320725
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaatt 50  Q
    |||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  24320676 taagggtgggattatctttcaatagtcataatatataatttctgaaaatt 24320725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 159; Significance: 9e-85; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 9534377 - 9534199
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9534377 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgatga 9534278  T
Q  101 tgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 179  Q
    ||||| |||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  9534277 tgattctgagtggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactg 9534199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 23370511 - 23370690
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataatttt-ggaaaataaattgagggttagggtttgatg 99  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||| ||||||||||||||||    
T  23370511 taagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttgatg 23370610  T
Q  100 atgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 179  Q
    |||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  23370611 atgattctgaggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactg 23370690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 14762763 - 14762936
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatga 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  14762763 taagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgatga 14762862  T
Q  101 tgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 173  Q
    ||||| || ||||  ||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  14762863 tgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 14762936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 20247794 - 20247967
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  20247794 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgatga 20247893  T
Q  101 tgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 173  Q
    ||||| || ||||  ||||||| |||||||||||||| | ||||||| ||||||| ||||||||||||||||||    
T  20247894 tgattctgaagggaaatgggtaatgatcatgttaattttcttgtaatataatgttcagaatgaaaacttaatct 20247967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 24193006 - 24192830
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcata-attttggaaaataaattgagggttagggtttgatg 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||    
T  24193006 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttgatg 24192907  T
Q  100 atgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctat 175  Q
    |||||| || ||||  ||||||| |||||||||||||||| ||||||||| ||||| ||||||||||||||||||||    
T  24192906 atgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttcagaatgaaaacttaatctat 24192830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 38310805 - 38310978
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatga 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  38310805 taagggtgagactatctctcgataatcataatctataatttctgaatattgacctaattgcatagttttggaagataaattgagggttagggtttgatga 38310904  T
Q  101 tgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 173  Q
    ||||| || ||||  ||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  38310905 tgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 38310978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 55499107 - 55499285
Alignment:
Q  1 taagggtgagactatctctcaataatc-ataatctataatttctg-aaaattgacctaattgcataattttggaaaataaattgagggttagggtttgat 98  Q
    ||||||||||||||||||||| ||||  ||||| | ||||||| | ||||||||||||| ||| |||  |||   |  ||||||||||||||||||||||    
T  55499107 taagggtgagactatctctcattaatagataatatgtaatttcgggaaaattgacctaactgcttaaccttgaggataaaattgagggttagggtttgat 55499206  T
Q  99 gatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatac 177  Q
    ||||||| ||||||| ||||||| |||||||||||||| | ||||||||| |||||  |||||||| ||||||||||||    
T  55499207 gatgattctgaggggaatgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatctatac 55499285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 24933834 - 24933937
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||  |||   ||||||||||||||    
T  24933834 taagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataatatgaaaattagggtttgatga 24933932  T
Q  101 tgatt 105  Q
    |||||    
T  24933933 tgatt 24933937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 16801473 - 16801648
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaat-aaattgagggttagggtttgatg 99  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||| ||  ||| ||| || ||||||| |||||||| ||||||    
T  16801473 taagggtgagactatctctcaataatcat-atatataatttctgaaaattgacctgattgcttagcttttgaagataaaattgaaggttaggg-ttgatg 16801570  T
Q  100 atgattatgaggggtatgg-gtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctata 176  Q
    |||||| ||||| | |||| ||| |||||||||||| | |  |||||||| ||||||||||||||  ||||| |||||    
T  16801571 atgattttgaggagaatggtgtaatgatcatgttaaatatgctgtaatgtgatgtttagaatgaattcttaacctata 16801648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 41455103 - 41455178
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaata 77  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||    
T  41455103 taagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaata 41455178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 18929295 - 18929239
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaa 57  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||    
T  18929295 taagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa 18929239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 17240518 - 17240577
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 60  Q
    ||||||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||    
T  17240518 taagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 17240577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 13302246 - 13302295
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaatt 50  Q
    ||||||||||| ||||| |||||||||||||| | |||||||||||||||    
T  13302246 taagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13302295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 13323793 - 13323842
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaatt 50  Q
    ||||||||||| ||||| |||||||||||||| | |||||||||||||||    
T  13323793 taagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13323842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 12033450 - 12033499
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaatt 50  Q
    |||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  12033450 taagggtgggattatctttcaatagtcataatatataatttctgaaaatt 12033499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 13312902 - 13312951
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaatt 50  Q
    ||||||||||| ||||| |||||||||||||| | |||||| ||||||||    
T  13312902 taagggtgagattatctttcaataatcataatatgtaatttttgaaaatt 13312951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 17131781 - 17131732
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaatt 50  Q
    |||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  17131781 taagggtgggattatctttcaatagtcataatatataatttctgaaaatt 17131732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 51301638 - 51301589
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaatt 50  Q
    ||||||||||| |||||  ||||||||||||| | |||||||||||||||    
T  51301638 taagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 51301589  T

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Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 10389449 - 10389553
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatga 100  Q
    |||||||| || ||||| ||||| || ||||| ||||||||||||||| | | ||||||| ||| ||||  | |||||  |||   ||||||||||||||    
T  10389449 taagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtttgatga 10389548  T
Q  101 tgatt 105  Q
    |||||    
T  10389549 tgatt 10389553  T

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Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 10414538 - 10414642
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatga 100  Q
    |||||||| || ||||| ||||| || ||||| ||||||||||||||| | | ||||||| ||| ||||  | |||||  |||   ||||||||||||||    
T  10414538 taagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtttgatga 10414637  T
Q  101 tgatt 105  Q
    |||||    
T  10414638 tgatt 10414642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 10421208 - 10421312
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatga 100  Q
    |||||||| || ||||| ||||| || ||||| ||||||||||||||| | | ||||||| ||| ||||  | |||||  |||   ||||||||||||||    
T  10421208 taagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtttgatga 10421307  T
Q  101 tgatt 105  Q
    |||||    
T  10421308 tgatt 10421312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 159; Significance: 9e-85; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 6483767 - 6483589
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6483767 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgatga 6483668  T
Q  101 tgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 179  Q
    ||||| ||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  6483667 tgattttgaggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactg 6483589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 6487234 - 6487056
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6487234 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgatga 6487135  T
Q  101 tgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 179  Q
    ||||| ||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  6487134 tgattttgaggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactg 6487056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 19661459 - 19661634
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatga 100  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  19661459 taagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgatga 19661558  T
Q  101 tgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctata 176  Q
    ||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  19661559 tgattctgaggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctata 19661634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 26583876 - 26583702
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  26583876 taagggtgagactatctctcaataatcataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttagggcttgatga 26583778  T
Q  101 tgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctata 176  Q
    ||||| ||||||| | ||||| |||||||||||| | | |||||| || ||||| ||||||||  | |||||||||    
T  26583777 tgattctgaggggaaagggtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctata 26583702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 23089060 - 23089239
Alignment:
Q  1 taagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatg 99  Q
    ||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||| |||  |||   |  |||||||||||||||||||||||    
T  23089060 taagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgcttaaccttgaggataaaattgagggttagggtttgatg 23089159  T
Q  100 atgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 179  Q
    |||||| | ||||| ||||||| |||||||||||||| | ||||||||| | |||  |||||||| ||||||||||||||    
T  23089160 atgattctaaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactg 23089239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 23101468 - 23101647
Alignment:
Q  1 taagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatg 99  Q
    ||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||  |||  |||   |  |||||||||||||||||||||||    
T  23101468 taagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgtttaaccttgaggataaaattgagggttagggtttgatg 23101567  T
Q  100 atgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 179  Q
    |||||| ||||||| ||||||| |||||||||||||| | ||||||||| | |||  |||||||| ||||||||||||||    
T  23101568 atgattctgaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactg 23101647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 23879057 - 23878879
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatga 100  Q
    ||||||||||||||||||||| |||| || || |||||||||  ||||||||||||||||| |||  |||   | ||||||||||||||||||| | |||    
T  23879057 taagggtgagactatctctcattaataattatatataatttcgaaaaattgacctaattgcttaaccttgaggattaaattgagggttagggtt-gttga 23878959  T
Q  101 tgattatgaggggtatggg-tattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 179  Q
    ||||| ||||||| ||||| || |||||||||||||| | ||||||||| ||||| ||||||||| ||||||||||||||    
T  23878958 tgattctgaggggaatggggtaatgatcatgttaattatgttgtaatgtgatgttcagaatgaaatcttaatctatactg 23878879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 5706029 - 5706133
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaat-tgagggttagggtttgatg 99  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||| ||| |||| |||||  ||| |||   |||||||||||||    
T  5706029 taagggtgagactatctctcattaatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattagggtttgatg 5706127  T
Q  100 atgatt 105  Q
    ||||||    
T  5706128 atgatt 5706133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 23265192 - 23265133
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 60  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  23265192 taagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23265133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 23280260 - 23280201
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 60  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  23280260 taagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23280201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 21908409 - 21908353
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaa 57  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||    
T  21908409 taagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa 21908353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 24661627 - 24661576
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattga 52  Q
    |||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  24661627 taagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 24661576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 10626 - 10577
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaatt 50  Q
    |||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  10626 taagggtgggattatctttcaatagtcataatatataatttctgaaaatt 10577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 25180935 - 25180984
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaatt 50  Q
    |||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  25180935 taagggtgggattatctttcaatagtcataatatataatttctgaaaatt 25180984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 149; Significance: 8e-79; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 14423034 - 14422858
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataatttt-ggaaaataaattgagggttagggtttgatg 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||||    
T  14423034 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttgatg 14422935  T
Q  100 atgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctata 176  Q
    |||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  14422934 atgattctgaggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctata 14422858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 16009626 - 16009448
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||| |||||| ||||||||||    
T  16009626 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatggttttggaagataaattgtgggttaaggtttgatga 16009527  T
Q  101 tgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 179  Q
    ||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16009526 tgattctgaggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactg 16009448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 10895796 - 10895969
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataatttt-ggaaaataaattgagggttagggtttgatg 99  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||| |||||||| ||||||||||||||||    
T  10895796 taagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttgatg 10895895  T
Q  100 atgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 173  Q
    |||||| ||||||| |||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  10895896 atgattctgaggggaatgggtattgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 10895969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 15168225 - 15168052
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatga 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  15168225 taagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgatga 15168126  T
Q  101 tgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 173  Q
    ||||| || ||||  ||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  15168125 tgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 15168052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 18873410 - 18873237
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatga 100  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  18873410 taagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgatga 18873311  T
Q  101 tgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 173  Q
    ||||| || ||||  ||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  18873310 tgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 18873237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 12709849 - 12710022
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatga 100  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12709849 taagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttagggtttgatga 12709947  T
Q  101 tgattatg-aggggtatgggtattgatcatgttaattcta-ttgtaatgtaatgtttagaatgaaaacttaatct 173  Q
    |||||||| || |  ||||||| ||||||||||||||||| ||||||| ||||||| |||||  |||||||||||    
T  12709948 tgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatct 12710022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 13122920 - 13123093
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatga 100  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  13122920 taagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttagggtttgatga 13123018  T
Q  101 tgattatg-aggggtatgggtattgatcatgttaattcta-ttgtaatgtaatgtttagaatgaaaacttaatct 173  Q
    |||||||| || |  ||||||| ||||||||||||||||| ||||||| ||||||| |||||  |||||||||||    
T  13123019 tgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatct 13123093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 13743758 - 13743584
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatga 100  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  13743758 taagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttagggtttgatga 13743660  T
Q  101 tgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctat 175  Q
    |||||||| || |  ||||||| |||||||||||||| | ||||| | |  |||| ||| |||| |||||||||||    
T  13743659 tgattatgaagagaaatgggtaatgatcatgttaattttcttgtattatgctgttcagattgaagacttaatctat 13743584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 16677345 - 16677167
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcata-attttggaaaat-aaattgagggttagggtttgat 98  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||| || ||||| ||||||||||||||||    
T  16677345 taagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttagggtttgat 16677246  T
Q  99 gatgattatgaggggtatgg-gtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctata 176  Q
    ||||||| ||||| | |||| ||| |||||||||||| | | |||||| || ||||| ||||||||  | |||||||||    
T  16677245 gatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctata 16677167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 17651581 - 17651403
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcata-attttggaaaat-aaattgagggttagggtttgat 98  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||| || ||||| ||||||||||||||||    
T  17651581 taagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttagggtttgat 17651482  T
Q  99 gatgattatgaggggtatgg-gtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctata 176  Q
    ||||||| ||||| | |||| ||| |||||||||||| | | |||||| || ||||| ||||||||  | |||||||||    
T  17651481 gatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctata 17651403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 12590649 - 12590818
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||  |||  |||||||||||||||    
T  12590649 taagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataatatgaaagttagggtttgatga 12590747  T
Q  101 tgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatc 172  Q
    ||||| |||  || ||| |||  ||| |||||| || | ||| ||| ||||||| ||||||||| |||||||    
T  12590748 tgattctga-tggaatgagtaaagatgatgttagttttcttggaatttaatgttaagaatgaaagcttaatc 12590818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 13007481 - 13007378
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||  |||  |||||||||||||||    
T  13007481 taagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggtttgatga 13007383  T
Q  101 tgatt 105  Q
    |||||    
T  13007382 tgatt 13007378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 11382876 - 11382926
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattg 51  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11382876 taagggtgagactatctctcaataatcataatatataatttctgaaaattg 11382926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 11389353 - 11389403
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattg 51  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11389353 taagggtgagactatctctcaataatcataatatataatttctgaaaattg 11389403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 20311057 - 20311107
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattg 51  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  20311057 taagggtgagactatctctcaataatcataacgtataatttctgaaaattg 20311107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 21230965 - 21231015
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattg 51  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  21230965 taagggtgagactatctctcaataatcatagtatataatttctgaaaattg 21231015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 13679543 - 13679485
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaatt 59  Q
    ||||||||||||||||| ||||| ||||| || |||||||| |||||||||| ||||||    
T  13679543 taagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaatt 13679485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 46626012 - 46625961
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattga 52  Q
    |||||||||||||| |||||||| || ||||| ||||||||| |||||||||    
T  46626012 taagggtgagactaactctcaatgattataatatataatttcggaaaattga 46625961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 2971303 - 2971254
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaatt 50  Q
    |||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  2971303 taagggtgggattatctttcaatagtcataatttataatttctgaaaatt 2971254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 11311108 - 11311059
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaatt 50  Q
    |||||||||||||||||||||||||| ||| | || ||||||| ||||||    
T  11311108 taagggtgagactatctctcaataataatagtgtagaatttctaaaaatt 11311059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 20906467 - 20906516
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaatt 50  Q
    |||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  20906467 taagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20906516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 144; Significance: 8e-76; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 10201 - 10380
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataatttt-ggaaaataaattgagggttagggtttgatg 99  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||| ||||||||||||||||    
T  10201 taagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttgatg 10300  T
Q  100 atgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 179  Q
    |||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10301 atgattctgaggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactg 10380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 144; Significance: 8e-76; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 1531 - 1710
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataatttt-ggaaaataaattgagggttagggtttgatg 99  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||| ||||||||||||||||    
T  1531 taagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttgatg 1630  T
Q  100 atgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 179  Q
    |||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1631 atgattctgaggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactg 1710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 144; Significance: 8e-76; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 23839248 - 23839069
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataat-tttggaaaataaattgagggttagggtttgatg 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||||||||    
T  23839248 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtgtttggaagataaattgagggttagggtttgatg 23839149  T
Q  100 atgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 179  Q
    |||||| | ||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  23839148 atgattctaaggggaatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactg 23839069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 4477907 - 4477731
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataatttt-ggaaaataaattgagggttagggtttgatg 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||| ||||||||||||||||    
T  4477907 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttgatg 4477808  T
Q  100 atgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctata 176  Q
    |||||| ||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  4477807 atgattctgaggggaatgggtattgatcatgctaattctgttgtaatgtaatgtttagaatgaaaacttaatctata 4477731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 10986186 - 10986365
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataatttt-ggaaaataaattgagggttagggtttgatg 99  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||| |||| |||||||||||||||||||||||||    
T  10986186 taagggtgagactatctttcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttgatg 10986285  T
Q  100 atgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 179  Q
    |||||| ||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  10986286 atgattctgaggggaatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactg 10986365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 29614152 - 29614325
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttgg-aaaataaattgagggttagggtttgatg 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  29614152 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctagttgcataattttggaaaaataaattgagggttagggtttgatg 29614251  T
Q  100 atgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 173  Q
    ||||||||| ||||  ||||||| |||||||||||||||| ||||| || |||||||||||||||||||||||||    
T  29614252 atgattatgaagggaaatgggtaatgatcatgttaattctcttgtattg-aatgtttagaatgaaaacttaatct 29614325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 23057988 - 23057815
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatga 100  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  23057988 taagggtgagactatctctcgataatcataatctataattcctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgatga 23057889  T
Q  101 tgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 173  Q
    ||||| || ||||  ||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  23057888 tgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 23057815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 18800487 - 18800311
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaata-aattgagggttagggtttgatg 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||    
T  18800487 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaatagaattgagggttagggtttgatg 18800388  T
Q  100 atgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctata 176  Q
    |||||| ||  ||| ||| ||| |||||||||||||||| ||||||||| ||||| | ||||||| |||||||||||    
T  18800387 atgattctggagggaatgagtaatgatcatgttaattctgttgtaatgtgatgttcaaaatgaaatcttaatctata 18800311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 930101 - 930229
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatga 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||    
T  930101 taagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgtatagttttgaaaaataaattgagggttagggtttgatga 930200  T
Q  101 tgattatgaggggtatgggtattgatcat 129  Q
    || || ||| ||| ||||||| |||||||    
T  930201 tgtttctgaagggaatgggtaatgatcat 930229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 21565217 - 21565396
Alignment:
Q  1 taagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatg 99  Q
    ||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||| |||  |||   |  |||||||||||||||||||||||    
T  21565217 taagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgcttaaccttgaggataaaattgagggttagggtttgatg 21565316  T
Q  100 atgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 179  Q
    |||||| | ||||| ||||||| |||||||||||||| | ||||||||| | |||  |||||||| ||||||||||||||    
T  21565317 atgattctaaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactg 21565396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 12168412 - 12168309
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||  |||  |||||||||||||||    
T  12168412 taagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggtttgatga 12168314  T
Q  101 tgatt 105  Q
    |||||    
T  12168313 tgatt 12168309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 19287321 - 19287218
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||  |||  |||||||||||||||    
T  19287321 taagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggtttgatga 19287223  T
Q  101 tgatt 105  Q
    |||||    
T  19287222 tgatt 19287218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 19785875 - 19785978
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||| |||||||||||||| |||  |||||||||||||||    
T  19785875 taagggtgagactatctctcaataatcataatctataatttctg-aaattgacctagttgaatagttttggaaaataaaatgaaagttagggtttgatga 19785973  T
Q  101 tgatt 105  Q
    |||||    
T  19785974 tgatt 19785978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 19878505 - 19878402
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||  |||  |||||||||||||||    
T  19878505 taagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggtttgatga 19878407  T
Q  101 tgatt 105  Q
    |||||    
T  19878406 tgatt 19878402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 105
Target Start/End: Complemental strand, 19884279 - 19884178
Alignment:
Q  3 agggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatgatg 102  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||  |||  |||||||||||||||||    
T  19884279 agggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggtttgatgatg 19884181  T
Q  103 att 105  Q
    |||    
T  19884180 att 19884178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 34646666 - 34646743
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataa 78  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  34646666 taagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaataattttggaaaataa 34646743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 34639992 - 34640069
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataa 78  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  34639992 taagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaatagttttggaaaataa 34640069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 25469710 - 25469808
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatga 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||  |||||||||||||  |||   ||||||||||||||    
T  25469710 taagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaaaataatatgaaaattagggtttgatga 25469807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 24512851 - 24512899
Alignment:
Q  3 agggtgagactatctctcaataatcataatctataatttctgaaaattg 51  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||    
T  24512851 agggtgagactatctctcaataatcatagtatataatttctgaaaattg 24512899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 9187545 - 9187498
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaa 48  Q
    ||||||||||||||||||||||||||| ||||  ||||||||||||||    
T  9187545 taagggtgagactatctctcaataatcttaatacataatttctgaaaa 9187498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 25348537 - 25348486
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattga 52  Q
    |||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  25348537 taagggtgagactatctctcaataataatagtatagaatttctgaaaattga 25348486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 25598694 - 25598643
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattga 52  Q
    |||||||||||||| |||||||| |||||||| |||| ||||||||||||||    
T  25598694 taagggtgagactaactctcaatgatcataatatatattttctgaaaattga 25598643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 25397223 - 25397172
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattga 52  Q
    |||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  25397223 taagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 25397172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 144; Significance: 8e-76; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 20437029 - 20437208
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataatttt-ggaaaataaattgagggttagggtttgatg 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||||    
T  20437029 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttgatg 20437128  T
Q  100 atgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 179  Q
    |||||| ||||||| |||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||    
T  20437129 atgattctgaggggaatgggtattgatcatgttaattatgttgtaatgtaatgttcagaatgaaaacttaatctatactg 20437208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 41112084 - 41111981
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||| |||||||  |||  |||||||||||||||    
T  41112084 taagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttgaaaaataagatgaaagttagggtttgatga 41111986  T
Q  101 tgatt 105  Q
    |||||    
T  41111985 tgatt 41111981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 32651622 - 32651563
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 60  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  32651622 taagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 32651563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 18712846 - 18712790
Alignment:
Q  4 gggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 60  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  18712846 gggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 18712790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 19663522 - 19663572
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattg 51  Q
    |||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  19663522 taagggtgagactatctctcgataatcatagtatataatttctgaaaattg 19663572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 10811788 - 10811839
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattga 52  Q
    |||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  10811788 taagggtgagactatctctcaataataatagtgtagaatttctgaaaattga 10811839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 20805371 - 20805320
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattga 52  Q
    |||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  20805371 taagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 20805320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 11158143 - 11158093
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattg 51  Q
    |||||||||||||| |||||||| ||| |||| ||||||||||||||||||    
T  11158143 taagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 11158093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 20851138 - 20851187
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaatt 50  Q
    |||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  20851138 taagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20851187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 20857765 - 20857814
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaatt 50  Q
    |||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  20857765 taagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20857814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 21706325 - 21706276
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaatt 50  Q
    |||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  21706325 taagggtgggattatctttcaatagtcataatatataatttctgaaaatt 21706276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 21710867 - 21710818
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaatt 50  Q
    |||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  21710867 taagggtgggattatctttcaatagtcataatatataatttctgaaaatt 21710818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 111932 - 111758
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaa-ttgacctaattgcataattttggaaaataaattgagggttagggtttgatg 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  111932 taagggtgagactatctctcaataatcataatctataatttctgaaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgatg 111833  T
Q  100 atgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 173  Q
    |||||| || ||||  ||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  111832 atgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 111758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 1227 - 1055
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatga 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  1227 taagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttagggtttgatga 1129  T
Q  101 tgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 173  Q
     ||||||| ||||  ||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  1128 ggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 1055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 50228 - 50056
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatga 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  50228 taagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttagggtttgatga 50130  T
Q  101 tgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 173  Q
     ||||||| ||||  ||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  50129 ggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 50056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 14401 - 14577
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcata-attttggaaaataaattgagggttagggtttgatg 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||    
T  14401 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttgatg 14500  T
Q  100 atgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctat 175  Q
    |||||| || ||||  ||||||| |||||||||||||||| ||||||||| |||||  |||||||||||||||||||    
T  14501 atgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttccgaatgaaaacttaatctat 14577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 11391 - 11212
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaata-aattgagggttagggtttgatg 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||    
T  11391 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaatagaattgagggttagggtttgatg 11292  T
Q  100 atgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 179  Q
    |||||| ||  ||| ||| ||| |||||||||||||||| ||||||||| ||||| | ||||||| ||||||| ||||||    
T  11291 atgattctggagggaatgagtaatgatcatgttaattctgttgtaatgtgatgttcaaaatgaaatcttaatccatactg 11212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 756 - 930
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcata-attttggaaaataaattgagggttagggtttgatg 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  756 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaaaataaattgagggttagggtttgatg 855  T
Q  100 atgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 173  Q
    | ||||||| ||||  ||||||| |||||||| |||| || ||||||| ||||||| || || ||||||||||||    
T  856 aggattatgaagggaaatgggtaatgatcatgataatactcttgtaatataatgttcaggataaaaacttaatct 930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 340 - 167
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatga 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  340 taagggtgagactatctctcaataaccataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttagggtttgatga 242  T
Q  101 tgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctat 175  Q
    ||||| ||||||| ||||||| |||||||||||||| | ||||| | |  |||| ||| |||| |||||||||||    
T  241 tgattctgaggggaatgggtaatgatcatgttaattttcttgtattatggtgttcagattgaagacttaatctat 167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 109; Significance: 6e-55; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 8580 - 8751
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaa-ttgacctaattgcataattttggaaaataaattgagggttagggtttgatg 99  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| ||||||||||||||||||||    
T  8580 taagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttgagggttagggtttgatg 8679  T
Q  100 atgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatc 172  Q
    ||||||||||  || ||||||| |||| ||||||||||| ||||||| ||||||| | |||||||||||||||    
T  8680 atgattatga-tggaatgggtaatgattatgttaattctcttgtaatttaatgttcaaaatgaaaacttaatc 8751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 1903 - 2074
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaa-ttgacctaattgcataattttggaaaataaattgagggttagggtttgatg 99  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| ||||||||||||||||||||    
T  1903 taagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttgagggttagggtttgatg 2002  T
Q  100 atgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatc 172  Q
    |||||| |||  || ||||||| |||| ||||||||||| ||||||| ||||||| | |||||||||||||||    
T  2003 atgattttga-tggaatgggtaatgattatgttaattctcttgtaatttaatgttcataatgaaaacttaatc 2074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 101; Significance: 4e-50; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 8045838 - 8046009
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatga 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  8045838 taagggtgagactatctctcgataatcataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttagggtttgacga 8045936  T
Q  101 tgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatc 172  Q
      ||| || ||||  |||||||  ||| ||||||||||| ||||||| ||||||| |||||||||||||||||    
T  8045937 gaattctgaagggaaatgggtaaagataatgttaattctcttgtaatataatgttcagaatgaaaacttaatc 8046009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 11848163 - 11847984
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttg------gaaaataaattgagggttagggtt 94  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||| |||||       ||||| |||||||||||||||||    
T  11848163 taagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaatcaattgagggttagggtt 11848064  T
Q  95 tgatgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 173  Q
    |||||| |||| || || || ||||||| ||||||||||||| || || |||| ||||||| ||||||||||||||||||    
T  11848063 tgatgacgattctgaagaggaatgggtaatgatcatgttaatccttttataatataatgttcagaatgaaaacttaatct 11847984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 53483754 - 53483650
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaat-tgagggttagggtttgatg 99  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||| |||| |||||  ||| |||   |||||||||||||    
T  53483754 taagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattagggtttgatg 53483656  T
Q  100 atgatt 105  Q
    ||||||    
T  53483655 atgatt 53483650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 15408189 - 15408139
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattg 51  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  15408189 taagggtgagactatctctcaataatcatagtatataatttctgaaaattg 15408139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 8834946 - 8834895
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattga 52  Q
    |||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  8834946 taagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 8834895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 13888692 - 13888641
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattga 52  Q
    |||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  13888692 taagggtgaggctaactctcaatgatcataatgtataatttctgaaaattga 13888641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 22724691 - 22724742
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattga 52  Q
    |||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  22724691 taagggtgagactatctctcaataataatagtatagaatttctgaaaattga 22724742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 14486710 - 14486661
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaatt 50  Q
    ||||||||||||||||  ||||| |||||||| |||||||||||||||||    
T  14486710 taagggtgagactatccttcaatgatcataatatataatttctgaaaatt 14486661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 15245266 - 15245215
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattga 52  Q
    |||||||||| ||| |||||||| ||| |||| |||||||||||||||||||    
T  15245266 taagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15245215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 15308171 - 15308120
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattga 52  Q
    |||||||||| ||| |||||||| ||| |||| |||||||||||||||||||    
T  15308171 taagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15308120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 27906315 - 27906266
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaatt 50  Q
    |||||||| || ||||| ||||| |||||||| |||||||||||||||||    
T  27906315 taagggtgggattatctttcaatgatcataatgtataatttctgaaaatt 27906266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 30907 - 30730
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaat-aaattgagggttagggtttgatg 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  | ||||||||| |||||||||||||    
T  30907 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaggtaaaattgaggattagggtttgatg 30808  T
Q  100 atgattatgaggggtatgg-gtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctata 176  Q
    |||||| ||||||| |||| |||  ||||||||||| | | |||||| || ||||  ||||||||  | |||||||||    
T  30807 atgattttgaggggaatggtgtaacgatcatgttaaatatgttgtaaagtgatgtgcagaatgaattcctaatctata 30730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 3298 - 3478
Alignment:
Q  1 taagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatg 99  Q
    ||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||| |||  ||||  |  |||||||||||||||||||||||    
T  3298 taagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgcttaaccttggggataaaattgagggttagggtttgatg 3397  T
Q  100 atgattatgaggggtatgggtattg-atcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 179  Q
    |||||| ||||||| ||||||| || |||||||||||| | ||||||||| ||||| ||||||||| ||||||||||||||    
T  3398 atgattctgaggggaatgggtaatgaatcatgttaattttgttgtaatgtgatgttcagaatgaaatcttaatctatactg 3478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 18219 - 18043
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcata-attttggaaaataaattgagggttagggtttgatg 99  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||  ||| |||||||||||||||||||| ||||| |||    
T  18219 taagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcttagctttaggaaaataaattgagggttaaggtttaatg 18120  T
Q  100 atgattatgaggggtatgggtattgatcatgttaattct-attgtaatgtaatgtttagaatgaaaacttaatctat 175  Q
    |||||| | | ||| |  |||| || |||||||||||||  ||||||||| ||||  ||||||||||||||| ||||    
T  18119 atgattctaacgggaaatggtaatggtcatgttaattctgtttgtaatgtgatgtccagaatgaaaacttaacctat 18043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 3627 - 3806
Alignment:
Q  1 taagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatg 99  Q
    ||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||| |||  |||   |  |||||||||||||||||||||||    
T  3627 taagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgcttaaccttgaggataaaattgagggttagggtttgatg 3726  T
Q  100 atgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 179  Q
    |||||| ||||||| ||||||| |||||||||||||| | ||||||||| |||||  |||||||| ||||||||||||||    
T  3727 atgattctgagggggatgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatctatactg 3806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 69; Significance: 5e-31; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 1738 - 1841
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatga 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||| |||||||||||||  |||  |||||||||||||||    
T  1738 taagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaagttagggtttgatga 1836  T
Q  101 tgatt 105  Q
    |||||    
T  1837 tgatt 1841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 5761 - 5864
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttgatga 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||| |||||||||||||  |||  |||||||||||||||    
T  5761 taagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaagttagggtttgatga 5859  T
Q  101 tgatt 105  Q
    |||||    
T  5860 tgatt 5864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 981 - 904
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataa 78  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||| ||||    
T  981 taagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgcatagtcttggaagataa 904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 8126 - 8049
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataa 78  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||| ||||    
T  8126 taagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgcatagtcttggaagataa 8049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 45280 - 45384
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaat-tgagggttagggtttgatg 99  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||| |||| |||||  ||| |||   |||||||||||||    
T  45280 taagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattagggtttgatg 45378  T
Q  100 atgatt 105  Q
    ||||||    
T  45379 atgatt 45384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 16870 - 16811
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 60  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  16870 taagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 16811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 116946 - 116887
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 60  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  116946 taagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 116887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 13 - 72
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 60  Q
    ||||||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||    
T  13 taagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 72  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 13682 - 13623
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 60  Q
    ||||||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||    
T  13682 taagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 13623  T

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Target: scaffold0020 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 101933 - 101992
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 60  Q
    |||||||||||||||||||||||||||||| | ||||||| ||||||||||| |||||||    
T  101933 taagggtgagactatctctcaataatcatagtatataattcctgaaaattgatctaattg 101992  T

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Target: scaffold0310 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 17693 - 17643
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattg 51  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  17693 taagggtgagactatctctcaataaccataatgtataatttctgaaaattg 17643  T

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Target: scaffold0107 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 40537 - 40587
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattg 51  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  40537 taagggtgagactatctctcaataatcatagtatataatttctgaaaattg 40587  T

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Target: scaffold0019 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 135523 - 135473
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattg 51  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  135523 taagggtgagactatctctcaataatcatagtatataatttctgaaaattg 135473  T

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Target: scaffold0235 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 22598 - 22646
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaat 49  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||    
T  22598 taagggtgagactatctctcaataatcatagtatataatttctgaaaat 22646  T

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Target: scaffold0124 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 34281 - 34331
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattg 51  Q
    |||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  34281 taagggtgagactatctctcgataatcatagtatataatttctgaaaattg 34331  T

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Target: scaffold0138 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 12347 - 12296
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattga 52  Q
    |||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  12347 taagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 12296  T

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Target: scaffold0317 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 1436 - 1378
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaatt 59  Q
    ||||||||||||||||| ||||| ||||| || |||||||| |||||||||| ||||||    
T  1436 taagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaatt 1378  T

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Target: scaffold0139 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 15002 - 15052
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaattg 51  Q
    |||||||||||||| |||||||| ||| |||| ||||||||||||||||||    
T  15002 taagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 15052  T

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Target: scaffold0815 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 1499 - 1453
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaa 47  Q
    |||||||||||||| |||||||| ||| |||| ||||||||||||||    
T  1499 taagggtgagactaactctcaatgatcttaatgtataatttctgaaa 1453  T

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Target: scaffold1318 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 1918 - 1967
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaatt 50  Q
    |||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  1918 taagggtgggattatctttcaatagtcataatatataatttctgaaaatt 1967  T

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Target: scaffold0348 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 9385 - 9336
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaatt 50  Q
    |||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  9385 taagggtgggattatctttcaatagtcataatatataatttctgaaaatt 9336  T

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Target: scaffold0127 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 10288 - 10239
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaatt 50  Q
    ||||||||||| |||||  ||||||||||||| | |||||||||||||||    
T  10288 taagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 10239  T

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Target: scaffold0023 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 135487 - 135438
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaatt 50  Q
    |||| |||||| ||||| |||||| ||||||| |||||||||||||||||    
T  135487 taagcgtgagattatctttcaatagtcataatatataatttctgaaaatt 135438  T

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Target: scaffold0001 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 493034 - 493082
Alignment:
Q  1 taagggtgagactatctctcaataatcataatctataatttctgaaaatt 50  Q
    ||||||||||| ||||| ||||||||| |||| |||||||||||||||||    
T  493034 taagggtgagattatctttcaataatc-taatgtataatttctgaaaatt 493082  T

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