View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5706_low_61 (Length: 238)

Name: NF5706_low_61
Description: NF5706
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5706_low_61
NF5706_low_61
[»] chr7 (34 HSPs)
chr7 (1-223)||(41008159-41008380)
chr7 (1-107)||(33655155-33655261)
chr7 (1-107)||(34235054-34235160)
chr7 (1-107)||(24970212-24970318)
chr7 (3-107)||(1051549-1051651)
chr7 (1-107)||(4833578-4833684)
chr7 (42-108)||(13425208-13425274)
chr7 (45-107)||(25887283-25887345)
chr7 (45-107)||(34228409-34228471)
chr7 (45-107)||(40196623-40196685)
chr7 (1-107)||(43230327-43230432)
chr7 (51-107)||(22163206-22163262)
chr7 (51-107)||(22221914-22221970)
chr7 (45-108)||(37417724-37417787)
chr7 (45-107)||(13771037-13771099)
chr7 (1-91)||(18231693-18231783)
chr7 (45-107)||(41497048-41497110)
chr7 (6-107)||(47390946-47391048)
chr7 (55-138)||(31571569-31571652)
chr7 (6-96)||(10315735-10315825)
chr7 (45-107)||(40572325-40572387)
chr7 (60-108)||(19261945-19261993)
chr7 (60-107)||(17852962-17853009)
chr7 (60-107)||(18063667-18063714)
chr7 (45-107)||(32872872-32872934)
chr7 (50-107)||(26365859-26365916)
chr7 (6-107)||(42306425-42306522)
chr7 (59-102)||(18127347-18127390)
chr7 (59-106)||(20393693-20393740)
chr7 (52-95)||(47229930-47229973)
chr7 (152-194)||(1051694-1051736)
chr7 (156-194)||(37620780-37620818)
chr7 (45-107)||(42087086-42087148)
chr7 (60-104)||(7791813-7791857)
[»] chr3 (29 HSPs)
chr3 (1-107)||(41110368-41110474)
chr3 (1-107)||(24560308-24560414)
chr3 (6-107)||(9312523-9312624)
chr3 (45-107)||(21773873-21773935)
chr3 (45-107)||(36568994-36569056)
chr3 (45-107)||(41040041-41040103)
chr3 (45-107)||(16275796-16275858)
chr3 (5-107)||(18654651-18654753)
chr3 (6-107)||(30200140-30200244)
chr3 (45-107)||(52185107-52185169)
chr3 (6-107)||(220449-220550)
chr3 (46-107)||(14898067-14898128)
chr3 (6-107)||(37102201-37102301)
chr3 (45-102)||(37807176-37807233)
chr3 (51-107)||(27542028-27542084)
chr3 (45-107)||(52474006-52474068)
chr3 (45-102)||(13082953-13083010)
chr3 (6-107)||(40463923-40464024)
chr3 (1-107)||(46556234-46556342)
chr3 (47-107)||(2387853-2387913)
chr3 (59-107)||(37237013-37237061)
chr3 (51-107)||(46204977-46205033)
chr3 (48-107)||(25655064-25655125)
chr3 (45-107)||(43005830-43005892)
chr3 (57-107)||(51819228-51819278)
chr3 (160-194)||(16275899-16275933)
chr3 (158-196)||(27541935-27541973)
chr3 (153-195)||(54985902-54985944)
chr3 (60-108)||(42772122-42772170)
[»] chr4 (31 HSPs)
chr4 (1-107)||(45741981-45742087)
chr4 (1-107)||(31348368-31348474)
chr4 (45-107)||(36151667-36151729)
chr4 (10-107)||(54320525-54320622)
chr4 (48-107)||(26167028-26167087)
chr4 (45-107)||(35248777-35248839)
chr4 (45-107)||(45132592-45132654)
chr4 (6-107)||(54935159-54935261)
chr4 (6-107)||(27735836-27735937)
chr4 (45-107)||(1968450-1968512)
chr4 (5-107)||(5730881-5730983)
chr4 (45-107)||(16400891-16400953)
chr4 (45-107)||(46007792-46007854)
chr4 (6-107)||(6891451-6891552)
chr4 (45-106)||(17938198-17938259)
chr4 (55-107)||(37711234-37711286)
chr4 (52-107)||(2917061-2917116)
chr4 (6-103)||(29798379-29798477)
chr4 (49-103)||(44784087-44784141)
chr4 (45-106)||(34110897-34110958)
chr4 (6-107)||(49735520-49735621)
chr4 (45-107)||(47433800-47433861)
chr4 (45-93)||(24565437-24565485)
chr4 (67-107)||(54494729-54494769)
chr4 (60-107)||(47846161-47846208)
chr4 (60-103)||(54745011-54745054)
chr4 (45-107)||(41174436-41174498)
chr4 (57-107)||(56135840-56135890)
chr4 (50-95)||(2247899-2247944)
chr4 (54-103)||(28332899-28332948)
chr4 (73-105)||(21695008-21695040)
[»] chr1 (23 HSPs)
chr1 (1-106)||(8529891-8529996)
chr1 (5-107)||(50744331-50744434)
chr1 (1-107)||(40094980-40095086)
chr1 (1-104)||(41498498-41498601)
chr1 (45-107)||(45585776-45585838)
chr1 (45-107)||(51597759-51597821)
chr1 (6-107)||(32951370-32951471)
chr1 (8-107)||(49946642-49946741)
chr1 (46-108)||(42230628-42230690)
chr1 (45-138)||(2859023-2859114)
chr1 (8-107)||(36285628-36285727)
chr1 (1-107)||(30010423-30010529)
chr1 (45-107)||(35349553-35349615)
chr1 (1-107)||(41676370-41676478)
chr1 (6-107)||(38509946-38510047)
chr1 (45-107)||(10391963-10392025)
chr1 (45-97)||(7444596-7444648)
chr1 (60-107)||(42742416-42742463)
chr1 (60-107)||(44211011-44211058)
chr1 (45-107)||(26940934-26940996)
chr1 (48-92)||(20576225-20576269)
chr1 (47-107)||(6563668-6563727)
chr1 (60-108)||(51582071-51582119)
[»] chr8 (29 HSPs)
chr8 (1-107)||(1026896-1027002)
chr8 (45-107)||(7503045-7503107)
chr8 (6-100)||(9718531-9718625)
chr8 (45-107)||(11575497-11575559)
chr8 (5-107)||(28083833-28083935)
chr8 (1-107)||(31543119-31543225)
chr8 (45-107)||(36308934-36308996)
chr8 (5-105)||(31738516-31738616)
chr8 (6-104)||(1281237-1281335)
chr8 (45-107)||(37032470-37032532)
chr8 (6-107)||(6315153-6315254)
chr8 (6-107)||(11785617-11785718)
chr8 (6-107)||(16653040-16653141)
chr8 (45-108)||(30664451-30664514)
chr8 (48-107)||(40990278-40990337)
chr8 (45-99)||(29691013-29691067)
chr8 (45-107)||(33922611-33922673)
chr8 (61-107)||(42650443-42650489)
chr8 (6-107)||(30479769-30479870)
chr8 (47-107)||(4247610-4247670)
chr8 (45-105)||(29358430-29358490)
chr8 (59-107)||(41103611-41103659)
chr8 (45-107)||(11033508-11033570)
chr8 (1-107)||(7979231-7979337)
chr8 (1-107)||(37923125-37923231)
chr8 (10-107)||(2248543-2248640)
chr8 (59-106)||(24243152-24243199)
chr8 (60-107)||(30581916-30581963)
chr8 (10-80)||(34634261-34634331)
[»] chr6 (29 HSPs)
chr6 (1-107)||(4097559-4097665)
chr6 (1-107)||(33236042-33236147)
chr6 (1-104)||(1300714-1300817)
chr6 (6-103)||(9719083-9719180)
chr6 (6-107)||(31849201-31849302)
chr6 (6-96)||(9721190-9721280)
chr6 (1-107)||(21606891-21606997)
chr6 (45-107)||(30487396-30487458)
chr6 (6-107)||(34176426-34176527)
chr6 (1-107)||(1390411-1390516)
chr6 (1-99)||(10818315-10818413)
chr6 (45-107)||(2892694-2892756)
chr6 (6-107)||(5585354-5585455)
chr6 (58-107)||(12811085-12811133)
chr6 (47-91)||(2900017-2900061)
chr6 (48-107)||(14515562-14515621)
chr6 (59-106)||(32926737-32926784)
chr6 (45-107)||(1395727-1395789)
chr6 (45-107)||(13583810-13583872)
chr6 (45-107)||(25741498-25741560)
chr6 (50-107)||(665937-665994)
chr6 (6-107)||(10348850-10348951)
chr6 (55-107)||(19278139-19278191)
chr6 (59-106)||(32922437-32922484)
chr6 (59-96)||(2892948-2892985)
chr6 (157-194)||(15323231-15323268)
chr6 (157-194)||(15353370-15353407)
chr6 (60-108)||(3023602-3023650)
chr6 (10-70)||(33041590-33041650)
[»] chr5 (27 HSPs)
chr5 (6-107)||(7544227-7544328)
chr5 (6-101)||(20146918-20147013)
chr5 (1-107)||(13634802-13634908)
chr5 (1-107)||(36392197-36392303)
chr5 (6-107)||(9856971-9857072)
chr5 (1-108)||(4373613-4373720)
chr5 (45-108)||(37551497-37551560)
chr5 (45-108)||(37654327-37654390)
chr5 (45-107)||(10072738-10072800)
chr5 (1-107)||(28279523-28279629)
chr5 (5-107)||(16938570-16938672)
chr5 (45-107)||(26414984-26415046)
chr5 (45-107)||(37606985-37607047)
chr5 (45-107)||(37779194-37779256)
chr5 (6-107)||(8502887-8502988)
chr5 (6-107)||(16501842-16501943)
chr5 (1-107)||(20513492-20513602)
chr5 (52-107)||(10476119-10476174)
chr5 (45-107)||(17024315-17024377)
chr5 (1-105)||(2550399-2550503)
chr5 (1-106)||(9798659-9798764)
chr5 (46-107)||(36363123-36363184)
chr5 (51-107)||(11756968-11757024)
chr5 (55-107)||(14681560-14681612)
chr5 (52-108)||(29002304-29002360)
chr5 (45-80)||(22023485-22023520)
chr5 (62-107)||(20409750-20409795)
[»] chr2 (31 HSPs)
chr2 (1-105)||(15224741-15224845)
chr2 (6-108)||(23748185-23748287)
chr2 (1-102)||(34209560-34209661)
chr2 (6-107)||(36347593-36347694)
chr2 (16-107)||(17379903-17379994)
chr2 (45-107)||(2241501-2241563)
chr2 (45-107)||(12541857-12541919)
chr2 (45-107)||(37739982-37740044)
chr2 (45-107)||(39732820-39732882)
chr2 (45-107)||(16565868-16565930)
chr2 (1-107)||(40022461-40022570)
chr2 (1-105)||(36566897-36567002)
chr2 (45-99)||(42316855-42316909)
chr2 (45-106)||(9631652-9631713)
chr2 (59-107)||(18811419-18811467)
chr2 (60-107)||(31795875-31795922)
chr2 (45-107)||(19566912-19566974)
chr2 (46-107)||(29525823-29525886)
chr2 (6-108)||(9427075-9427178)
chr2 (48-107)||(39821760-39821819)
chr2 (6-80)||(27926671-27926745)
chr2 (58-107)||(8426975-8427024)
chr2 (59-107)||(20545800-20545848)
chr2 (68-107)||(7681339-7681378)
chr2 (6-93)||(36046256-36046343)
chr2 (45-107)||(12751906-12751968)
chr2 (45-107)||(28262534-28262596)
chr2 (45-107)||(32503250-32503312)
chr2 (73-107)||(41778864-41778898)
chr2 (63-107)||(887007-887051)
chr2 (60-104)||(887210-887254)
[»] scaffold0262 (1 HSPs)
scaffold0262 (49-107)||(16391-16449)
[»] scaffold0067 (1 HSPs)
scaffold0067 (1-107)||(39234-39343)
[»] scaffold0294 (1 HSPs)
scaffold0294 (10-107)||(15354-15450)
[»] scaffold0171 (1 HSPs)
scaffold0171 (6-107)||(16041-16142)
[»] scaffold0096 (1 HSPs)
scaffold0096 (45-107)||(6675-6736)
[»] scaffold0006 (1 HSPs)
scaffold0006 (59-108)||(81516-81565)
[»] scaffold0341 (1 HSPs)
scaffold0341 (47-107)||(18861-18920)


Alignment Details
Target: chr7 (Bit Score: 103; Significance: 2e-51; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 41008380 - 41008159
Alignment:
Q  1 ttacatttcatttttaaattacggtcactatgattttt--gtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacactta 98  Q
    ||||||||||||||||||||||||  ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  41008380 ttacatttcatttttaaattacggatactatgatttttttgtcttcaaaagttaacatattaacatgataaacaatcatata--acttcaatcacactta 41008283  T
Q  99 atttatttttnnnnnnnncatgttatatagtccgtaatttnnnnnnnnnnnncaaattctctcctcccttccccttccaaaccctcaatccaaacatatc 198  Q
    ||||| ||||        ||||||||||||||||||||||            ||||||||| |||||||||||||  |||||||||||||||||||||      
T  41008282 attta-ttttaaaaaaaacatgttatatagtccgtaatttaaaaaagaaaaacaaattctcccctcccttcccctctcaaaccctcaatccaaacataca 41008184  T
Q  199 tttaatgtgccaaatcggtacgaca 223  Q
    |||||||||||||||||||| ||||    
T  41008183 tttaatgtgccaaatcggtatgaca 41008159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 33655155 - 33655261
Alignment:
Q  1 ttacatttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaat 100  Q
    |||| ||||||||||||||||||| ||||||||  | | | || ||||||||||||||||||||||||||  |||||||| |||||||||||||||||||    
T  33655155 ttacttttcatttttaaattacggacactatgaaatgttttttaaaaagttaacatattaacatgataaatgatcatataatacttcaatcacacttaat 33655254  T
Q  101 ttatttt 107  Q
    |||||||    
T  33655255 ttatttt 33655261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 34235054 - 34235160
Alignment:
Q  1 ttacatttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaat 100  Q
    |||| ||||||||||||||||||| ||||||||  | | |  | ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  34235054 ttacttttcatttttaaattacggacactatgaaatgttttataaaaagttaacatattaatatgataaacaatcatataatacttcaatcacacttaat 34235153  T
Q  101 ttatttt 107  Q
    |||||||    
T  34235154 ttatttt 34235160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 24970212 - 24970318
Alignment:
Q  1 ttacatttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaat 100  Q
    |||| |||||||||||||||||||  |||||||  | | | || |||||||||||||||||| |||||||| |||||||| |||||||||||||||||||    
T  24970212 ttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacttgataaacgatcatataatacttcaatcacacttaat 24970311  T
Q  101 ttatttt 107  Q
    |||||||    
T  24970312 ttatttt 24970318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 107
Target Start/End: Original strand, 1051549 - 1051651
Alignment:
Q  3 acatttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaattt 102  Q
    |||||||||||||||||||||| ||| ||||  | | | || |||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||    
T  1051549 acatttcatttttaaattacggacac-atgaaatgttttttaaaaagttaacatatta-catgataaacaatcatataatgcttcaatcacacttaattt 1051646  T
Q  103 atttt 107  Q
    |||||    
T  1051647 atttt 1051651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 4833578 - 4833684
Alignment:
Q  1 ttacatttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaat 100  Q
    |||| ||||||||||||||||| | ||||||||  | | |  | |||||||||| ||||||||||||||||||||||||| ||||| ||||||| |||||    
T  4833578 ttacttttcatttttaaattacagacactatgaaatgttttataaaaagttaacctattaacatgataaacaatcatataatacttaaatcacatttaat 4833677  T
Q  101 ttatttt 107  Q
    |||||||    
T  4833678 ttatttt 4833684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 42 - 108
Target Start/End: Original strand, 13425208 - 13425274
Alignment:
Q  42 ttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttattttt 108  Q
    ||||||||| ||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||    
T  13425208 ttcaaaagtcaacatattaacatgataaacaatcatattatacttcattcacacttaatttattttt 13425274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 25887345 - 25887283
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||    
T  25887345 aaaagttaacatattaatatgataaacaatcatataatactccaatcacacttaatttatttt 25887283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 34228409 - 34228471
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||    
T  34228409 aaaagttaacatattaatatgataagcaatcatataatacttcaatcacacttaatttatttt 34228471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 40196623 - 40196685
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  40196623 aaaagttaacatatcaacctgataaacaatcatataatacttcaatcacacttaatttatttt 40196685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 43230432 - 43230327
Alignment:
Q  1 ttacatttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaat 100  Q
    |||| ||| ||||||||||||||| |||| ||| |||| | || ||||||||||||||||||||||||||| ||| |||| | |||||||| ||||||||    
T  43230432 ttactttttatttttaaattacggacact-tgaattttttttttaaaagttaacatattaacatgataaacgatcgtataattcttcaatcgcacttaat 43230334  T
Q  101 ttatttt 107  Q
    |||||||    
T  43230333 ttatttt 43230327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 51 - 107
Target Start/End: Original strand, 22163206 - 22163262
Alignment:
Q  51 taacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  22163206 taacatattaacatgataaacgatcatataatacttcaatcacacttaatttatttt 22163262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 51 - 107
Target Start/End: Original strand, 22221914 - 22221970
Alignment:
Q  51 taacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  22221914 taacatattaacatgataaacgatcatataatacttcaatcacacttaatttatttt 22221970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 45 - 108
Target Start/End: Original strand, 37417724 - 37417787
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttattttt 108  Q
    ||||||||||||||| ||||||||||| |||||||| |||||||||||||||||| ||| ||||    
T  37417724 aaaagttaacatattcacatgataaacgatcatataatacttcaatcacacttaacttaatttt 37417787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 13771037 - 13771099
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||||||||||||||||||||||||||||| |||||  |||  ||||||||||||||||||||    
T  13771037 aaaagttaacatattaacatgataaacaatgatataacactcgaatcacacttaatttatttt 13771099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 18231783 - 18231693
Alignment:
Q  1 ttacatttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatc 91  Q
    |||| |||||||||||||||||   ||||||||  | | | || ||||||||||||||||||||||||||| |||||||| ||||||||||    
T  18231783 ttacttttcatttttaaattacaaacactatgaaatgttttttaaaaagttaacatattaacatgataaacgatcatataatacttcaatc 18231693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 41497048 - 41497110
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||| |||||||||||||||||||||  |||||||| | ||||||||||||||||||||||||    
T  41497048 aaaatttaacatattaacatgataaatgatcatataattcttcaatcacacttaatttatttt 41497110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 107
Target Start/End: Complemental strand, 47391048 - 47390946
Alignment:
Q  6 tttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaa-tcatatagtacttcaatcacacttaatttat 104  Q
    ||||||||||||||||||| |||||| |    | | || ||| ||||||||||||||||||||||||| ||||||| ||||||||||||| ||||| |||    
T  47391048 tttcatttttaaattacggacactataaaacattttttaaaatgttaacatattaacatgataaacaagtcatataatacttcaatcacaattaatgtat 47390949  T
Q  105 ttt 107  Q
    |||    
T  47390948 ttt 47390946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 55 - 138
Target Start/End: Original strand, 31571569 - 31571652
Alignment:
Q  55 atattaacatgataaacaatcatatagtacttcaatcacacttaatttatttttnnnnnnnncatgttatatagtccgtaattt 138  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||| | |||||        |||||||||| |||||||||||    
T  31571569 atattaacatgataaacaattatataatacttcaatcacacttaatatttttttaaaaaaagcatgttatatggtccgtaattt 31571652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 96
Target Start/End: Complemental strand, 10315825 - 10315735
Alignment:
Q  6 tttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacact 96  Q
    ||||||||||||| ||||| ||||||||  | | | || |||| |||||||||||||| ||||||| || ||||| |||||||||||||||    
T  10315825 tttcatttttaaaatacggacactatgaaatgttttttaaaaatttaacatattaacaagataaacgattatataatacttcaatcacact 10315735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 40572325 - 40572387
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||||||||||||||||||||   ||||||| ||||| |||||| |||||||||||||    
T  40572325 aaaagttaacatattaacatgataaaaggtcatataatactttaatcacgcttaatttatttt 40572387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 60 - 108
Target Start/End: Original strand, 19261945 - 19261993
Alignment:
Q  60 aacatgataaacaatcatatagtacttcaatcacacttaatttattttt 108  Q
    |||||||||||  |||||||||||||||||||||| |||||||||||||    
T  19261945 aacatgataaatgatcatatagtacttcaatcacaattaatttattttt 19261993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 107
Target Start/End: Complemental strand, 17853009 - 17852962
Alignment:
Q  60 aacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||||||||||| |||||||| ||| ||||||||||||||||||||||    
T  17853009 aacatgataaacgatcatataatacctcaatcacacttaatttatttt 17852962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 107
Target Start/End: Original strand, 18063667 - 18063714
Alignment:
Q  60 aacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||||||||||  |||||||| ||||||||||||||||||||||||||    
T  18063667 aacatgataaatgatcatataatacttcaatcacacttaatttatttt 18063714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 32872872 - 32872934
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||||||||||||||||||||||||||| ||||||  |  |||||| | ||||||||||||||    
T  32872872 aaaagttaacatattaacatgataaacactcatatcatctttcaattaaacttaatttatttt 32872934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 107
Target Start/End: Complemental strand, 26365916 - 26365859
Alignment:
Q  50 ttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||| ||| |||||||| ||||||||||||| |||||||||||||| || ||||||||    
T  26365916 ttaaaataataacatgagaaacaatcatataatacttcaatcacacctagtttatttt 26365859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 107
Target Start/End: Complemental strand, 42306522 - 42306425
Alignment:
Q  6 tttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatt 105  Q
    ||||||||||||||||||| ||||||||  | | | || |||||||| ||||||||| | |||||    |||||| |||| ||||||| |||||||||||    
T  42306522 tttcatttttaaattacggacactatgaaatgttttttaaaaagttagcatattaacctcataaa----catataatactccaatcacgcttaatttatt 42306427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 102
Target Start/End: Original strand, 18127347 - 18127390
Alignment:
Q  59 taacatgataaacaatcatatagtacttcaatcacacttaattt 102  Q
    ||||||||||||  |||||||| |||||||||||||||||||||    
T  18127347 taacatgataaatgatcatataatacttcaatcacacttaattt 18127390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 20393740 - 20393693
Alignment:
Q  59 taacatgataaacaatcatatagtacttcaatcacacttaatttattt 106  Q
    |||||| |||||  |||||||| |||||||||||||||||||||||||    
T  20393740 taacattataaatgatcatataatacttcaatcacacttaatttattt 20393693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 95
Target Start/End: Original strand, 47229930 - 47229973
Alignment:
Q  52 aacatattaacatgataaacaatcatatagtacttcaatcacac 95  Q
    |||||||||||||||||||||||||| || || |||||||||||    
T  47229930 aacatattaacatgataaacaatcatgtaataattcaatcacac 47229973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 1051694 - 1051736
Alignment:
Q  152 aaattctctcctcccttccccttccaaaccctcaatccaaaca 194  Q
    |||| ||||||||||||||||| | ||||||||||||||||||    
T  1051694 aaatcctctcctcccttcccctcctaaaccctcaatccaaaca 1051736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 194
Target Start/End: Complemental strand, 37620818 - 37620780
Alignment:
Q  156 tctctcctcccttccccttccaaaccctcaatccaaaca 194  Q
    |||| ||||||||||||| ||||||||||||||||||||    
T  37620818 tctcccctcccttcccctcccaaaccctcaatccaaaca 37620780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 42087148 - 42087086
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||||||| ||||||||| ||| |||| || ||||| || |||||| ||||||||||||||||    
T  42087148 aaaagttagcatattaacgtgacaaacgattatataataattcaattacacttaatttatttt 42087086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 7791857 - 7791813
Alignment:
Q  60 aacatgataaacaatcatatagtacttcaatcacacttaatttat 104  Q
    ||||||||||| ||||||||| ||||| ||||||| |||||||||    
T  7791857 aacatgataaataatcatataatacttaaatcacatttaatttat 7791813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 7e-30; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 41110368 - 41110474
Alignment:
Q  1 ttacatttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaat 100  Q
    |||| ||||||||||||||||||| ||||||||  | | |  | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  41110368 ttacttttcatttttaaattacggacactatgaaatattttataaaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaat 41110467  T
Q  101 ttatttt 107  Q
    |||||||    
T  41110468 ttatttt 41110474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 24560414 - 24560308
Alignment:
Q  1 ttacatttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaat 100  Q
    |||| ||||||||||||||||| | ||||||||  | | | || ||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||    
T  24560414 ttacttttcatttttaaattaccgacactatgaaatgttttttaaaaagttaacatattaacatgataaacgatcatataatacttcaatcacatttaat 24560315  T
Q  101 ttatttt 107  Q
    |||||||    
T  24560314 ttatttt 24560308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 107
Target Start/End: Original strand, 9312523 - 9312624
Alignment:
Q  6 tttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatt 105  Q
    ||||||||||||||||| | ||||||||  | | |  | |||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||    
T  9312523 tttcatttttaaattacagacactatgaaatattttgtaaaaagttaacatattaacatgataaacaatcatataatactcaaatcacacttaatttatt 9312622  T
Q  106 tt 107  Q
    ||    
T  9312623 tt 9312624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 21773935 - 21773873
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||    
T  21773935 aaaagttaacatatttacatgataaacaatcatataattcttcaatcacacttaatttatttt 21773873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 36568994 - 36569056
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||    
T  36568994 aaaagttaacatattaacatgataaacaatcgtataatagttcaatcacacttaatttatttt 36569056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 41040041 - 41040103
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||    
T  41040041 aaaagttaacatattaacatgataaacaatcatataatacttcaatcacgcttactttatttt 41040103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 16275796 - 16275858
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||||||||| |||||||||||||||||| |||||| |||||||||||||||| |||||||||    
T  16275796 aaaagttaacttattaacatgataaacaaccatataatacttcaatcacacttgatttatttt 16275858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 107
Target Start/End: Original strand, 18654651 - 18654753
Alignment:
Q  5 atttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttat 104  Q
    |||||||||||||||||||| | |||| |  | | | || || |||||||||||||||||||||||  |||||||| ||||||||| |||||||||||||    
T  18654651 atttcatttttaaattacggaccctataaaatattttttgaagagttaacatattaacatgataaatgatcatataatacttcaattacacttaatttat 18654750  T
Q  105 ttt 107  Q
    |||    
T  18654751 ttt 18654753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 107
Target Start/End: Original strand, 30200140 - 30200244
Alignment:
Q  6 tttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaa---tcatatagtacttcaatcacacttaattt 102  Q
    ||||||||||||||||||| ||||||||  | | | || ||||||| |||||||||||| ||||||||   ||||||||||||| |||||||||| ||||    
T  30200140 tttcatttttaaattacggacactatgaaatgttttttaaaaagtttacatattaacataataaacaacgatcatatagtactttaatcacacttgattt 30200239  T
Q  103 atttt 107  Q
    |||||    
T  30200240 atttt 30200244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 52185169 - 52185107
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| | | ||||||||||||    
T  52185169 aaaagttaacatattaacatgataaacaatcatataatacttcaattatatttaatttatttt 52185107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 107
Target Start/End: Original strand, 220449 - 220550
Alignment:
Q  6 tttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatt 105  Q
    ||||||||||||||||||| || |||||  | | | || |||||||||||||||||||| |||||||||| ||||  |||||||||| |||| |||||||    
T  220449 tttcatttttaaattacggacattatgaaatgttttttaaaaagttaacatattaacataataaacaatcttataacacttcaatcatacttgatttatt 220548  T
Q  106 tt 107  Q
    ||    
T  220549 tt 220550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 107
Target Start/End: Complemental strand, 14898128 - 14898067
Alignment:
Q  46 aaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||||||| ||||||||| ||||||| |||||||| ||||||||||||||||||||||||||    
T  14898128 aaagttaatatattaacacgataaacgatcatataatacttcaatcacacttaatttatttt 14898067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 107
Target Start/End: Original strand, 37102201 - 37102301
Alignment:
Q  6 tttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatt 105  Q
    ||||||||||||||||||| ||||||||  | | | || |||||||||||||||||||| || ||| |||||||| |||||||| ||||||| |||||||    
T  37102201 tttcatttttaaattacggacactatgaaatgttttttaaaaagttaacatattaacataat-aacgatcatataatacttcaaccacacttgatttatt 37102299  T
Q  106 tt 107  Q
    ||    
T  37102300 tt 37102301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 45 - 102
Target Start/End: Complemental strand, 37807233 - 37807176
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaattt 102  Q
    ||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||    
T  37807233 aaaagttaatatattaacatgataaacgatcatataatacttcaatcacacttaattt 37807176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 51 - 107
Target Start/End: Original strand, 27542028 - 27542084
Alignment:
Q  51 taacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||    
T  27542028 taacatattaacatgataaacgatcatataatacttcaatcacagttaatttatttt 27542084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 52474068 - 52474006
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||||||||||| |||||||||| ||||||| |||||||||||||  |||||||||||    
T  52474068 aaaagttaacatattaatatgataaacagtcatataatacttcaatcacatgtaatttatttt 52474006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 102
Target Start/End: Original strand, 13082953 - 13083010
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaattt 102  Q
    |||||||||||||||||||| |||||| |||||||| ||||||||| |||||| ||||    
T  13082953 aaaagttaacatattaacataataaacgatcatataatacttcaattacacttcattt 13083010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 107
Target Start/End: Original strand, 40463923 - 40464024
Alignment:
Q  6 tttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatt 105  Q
    ||||||||||||||||||| |||||| | || | | || |||  |||| | | ||||||||||||||||||||||  | ||||||| |||||||||||||    
T  40463923 tttcatttttaaattacggacactataaattgttttttaaaatattaaaacaataacatgataaacaatcatataaaaattcaatctcacttaatttatt 40464022  T
Q  106 tt 107  Q
    ||    
T  40464023 tt 40464024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 46556342 - 46556234
Alignment:
Q  1 ttacatttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatag--tacttcaatcacactta 98  Q
    |||| |||||||||| |||||||| ||||||||  | | | || ||||||||| |||||||||||| ||||  |||||||   ||||||||||||||| |    
T  46556342 ttacttttcatttttcaattacggacactatgacatattttttaaaaagttaagatattaacatgacaaacggtcatatataatacttcaatcacactca 46556243  T
Q  99 atttatttt 107  Q
    |||||||||    
T  46556242 atttatttt 46556234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 2387853 - 2387913
Alignment:
Q  47 aagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||| ||| ||||||||||||| |||||||| || || ||||||||||||||||||||    
T  2387853 aagttaaaataataacatgataaacgatcatataataatttaatcacacttaatttatttt 2387913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 107
Target Start/End: Complemental strand, 37237061 - 37237013
Alignment:
Q  59 taacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||||||  ||||| |||||||||||||||||||||||||||||    
T  37237061 taacatgataaatgatcatttagtacttcaatcacacttaatttatttt 37237013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 46205033 - 46204977
Alignment:
Q  51 taacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||||| ||| ||||  |||||||| ||||||||||||||||||||||||||    
T  46205033 taacatattaatatgttaaatgatcatataatacttcaatcacacttaatttatttt 46204977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 48 - 107
Target Start/End: Original strand, 25655064 - 25655125
Alignment:
Q  48 agttaacatattaacatgataaacaatcatatag--tacttcaatcacacttaatttatttt 107  Q
    |||||||||||||| ||||||||  ||||||||   ||||||||||||||||||||||||||    
T  25655064 agttaacatattaatatgataaatgatcatatataatacttcaatcacacttaatttatttt 25655125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 43005830 - 43005892
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||||||||||| ||||||||  |||||||| ||||||||||| | | ||||||||||    
T  43005830 aaaagttaacatattaatatgataaaatatcatataatacttcaatcaaattaaatttatttt 43005892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 57 - 107
Target Start/End: Original strand, 51819228 - 51819278
Alignment:
Q  57 attaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||||||||| ||| |||| ||||||||||||||| ||||||||||    
T  51819228 attaacatgataaacgatcgtataatacttcaatcacactaaatttatttt 51819278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 194
Target Start/End: Original strand, 16275899 - 16275933
Alignment:
Q  160 tcctcccttccccttccaaaccctcaatccaaaca 194  Q
    ||||||| |||||||||||||||||||||||||||    
T  16275899 tcctcccctccccttccaaaccctcaatccaaaca 16275933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 196
Target Start/End: Complemental strand, 27541973 - 27541935
Alignment:
Q  158 tctcctcccttccccttccaaaccctcaatccaaacata 196  Q
    |||||||||||||||| | ||||||||||||||||||||    
T  27541973 tctcctcccttcccctcctaaaccctcaatccaaacata 27541935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 195
Target Start/End: Original strand, 54985902 - 54985944
Alignment:
Q  153 aattctctcctcccttccccttccaaaccctcaatccaaacat 195  Q
    ||||||||| || |||||||||| |||||||||||||||||||    
T  54985902 aattctctcatctcttccccttctaaaccctcaatccaaacat 54985944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 108
Target Start/End: Complemental strand, 42772170 - 42772122
Alignment:
Q  60 aacatgataaacaatcatatagtacttcaatcacacttaatttattttt 108  Q
    |||||||||||  |||||||| ||||||||  |||||||||||||||||    
T  42772170 aacatgataaatgatcatataatacttcaaaaacacttaatttattttt 42772122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 2e-27; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 45742087 - 45741981
Alignment:
Q  1 ttacatttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaat 100  Q
    |||| ||||||||||||||||||| ||||||||  | | | || ||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||    
T  45742087 ttacttttcatttttaaattacggacactatgaaatgttttttaaaaagttaacatattaacatgataaacgatcatataatacttcaatcacatttaat 45741988  T
Q  101 ttatttt 107  Q
    |||||||    
T  45741987 ttatttt 45741981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 31348368 - 31348474
Alignment:
Q  1 ttacatttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaat 100  Q
    |||| ||||||||||||||||||| ||||||||  | | | || ||||| |||||||||||||||||||||||||||||| || ||||||||||| ||||    
T  31348368 ttacttttcatttttaaattacggacactatgaaatgttttttaaaaagctaacatattaacatgataaacaatcatataataattcaatcacacataat 31348467  T
Q  101 ttatttt 107  Q
    |||||||    
T  31348468 ttatttt 31348474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 36151729 - 36151667
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  36151729 aaaagttaacatattaacatgataaacgatcatataatacttcaatcacacttaatttatttt 36151667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 54320622 - 54320525
Alignment:
Q  10 atttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||||||||| ||||||||    | | || |||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  54320622 atttttaaattacggacactatgaaacgttttttaaaaagttagcatattaacatgataaacaatcatataatactccaatcacacttaatttatttt 54320525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 107
Target Start/End: Complemental strand, 26167087 - 26167028
Alignment:
Q  48 agttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  26167087 agttaacatattaacatgataaacgatcatataatacttcaatcacacttaatttatttt 26167028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 35248839 - 35248777
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  35248839 aaaagttaacgtattaacatgataaataatcatataatacttcaatcacacttaatttatttt 35248777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 45132592 - 45132654
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||    
T  45132592 aaaagttaacatattaaaatgataaacgatcatataatacttcaatcacacttaatttatttt 45132654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 107
Target Start/End: Complemental strand, 54935261 - 54935159
Alignment:
Q  6 tttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatag-tacttcaatcacacttaatttat 104  Q
    ||||||||||||||||||| ||||||||  | | | || |||||||| |||||||| ||||||||| ||||||||  |||||||||||||||||||||||    
T  54935261 tttcatttttaaattacggacactatgaaatgtattttaaaaagttatcatattaatatgataaacgatcatataaatacttcaatcacacttaatttat 54935162  T
Q  105 ttt 107  Q
    |||    
T  54935161 ttt 54935159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 107
Target Start/End: Complemental strand, 27735937 - 27735836
Alignment:
Q  6 tttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatt 105  Q
    ||||||||||||||||||| |||||| |  | | | || || ||||| |||||||||||||||||  |||||||| ||||||||||||||||||||||||    
T  27735937 tttcatttttaaattacggacactataaaatgttttttaaagagttagcatattaacatgataaatgatcatataatacttcaatcacacttaatttatt 27735838  T
Q  106 tt 107  Q
    ||    
T  27735837 tt 27735836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 1968450 - 1968512
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||| | |||||||||    
T  1968450 aaaagttaacatattaacatgataaacgatcatataatacttcaatcacacctgatttatttt 1968512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 107
Target Start/End: Original strand, 5730881 - 5730983
Alignment:
Q  5 atttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttat 104  Q
    |||||||||||||||||||| | |||| |  | | | || || |||||||||||||||||||||||  |||||||| ||||||||| |||||||||||||    
T  5730881 atttcatttttaaattacggaccctataaaatattttttgaagagttaacatattaacatgataaatgatcatataatacttcaattacacttaatttat 5730980  T
Q  105 ttt 107  Q
    |||    
T  5730981 ttt 5730983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 16400953 - 16400891
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||| | ||||||||||||    
T  16400953 aaaagttaacatattaacatgataaacgatcatataatacttcaatcataattaatttatttt 16400891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 46007792 - 46007854
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||||||||||||||||||||  |||||||| |||||||||| |||||||||||||||    
T  46007792 aaaagttaacatattaacatgataaatgatcatataatacttcaatctcacttaatttatttt 46007854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 107
Target Start/End: Complemental strand, 6891552 - 6891451
Alignment:
Q  6 tttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatt 105  Q
    |||| ||||||||||| || |||||||| || | | |  |||| |||| ||| |||||| |||||| |||||||| ||||||||||||||||||||||||    
T  6891552 tttcgtttttaaattatggacactatgaattgtttttaaaaaaattaaaataataacattataaacgatcatataatacttcaatcacacttaatttatt 6891453  T
Q  106 tt 107  Q
    ||    
T  6891452 tt 6891451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 45 - 106
Target Start/End: Original strand, 17938198 - 17938259
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttattt 106  Q
    |||| |||| ||| ||||||||||||| |||||||| |||||||||||||||||||||||||    
T  17938198 aaaatttaaaataataacatgataaacgatcatataatacttcaatcacacttaatttattt 17938259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 107
Target Start/End: Complemental strand, 37711286 - 37711234
Alignment:
Q  55 atattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||||||||||  |||||||| ||||||||||||||||||||||||||    
T  37711286 atattaacatgataaatgatcatataatacttcaatcacacttaatttatttt 37711234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 2917061 - 2917116
Alignment:
Q  52 aacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||||||||||||||||||| |||||||| ||||||||||||| | ||||||||||    
T  2917061 aacatattaacatgataaacgatcatataatacttcaatcacaataaatttatttt 2917116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 29798477 - 29798379
Alignment:
Q  6 tttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaa-catgataaacaatcatatagtacttcaatcacacttaattta 103  Q
    ||||||||||||||||||| ||||||||  | | | || |||| ||||||| |||| ||| |||||| |||||||| |||||||||||||||| |||||    
T  29798477 tttcatttttaaattacggacactatgaaatgttttttaaaaaattaacatgttaaacataataaacgatcatataatacttcaatcacacttgattta 29798379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 44784141 - 44784087
Alignment:
Q  49 gttaacatattaacatgataaacaatcatatagtacttcaatcacacttaattta 103  Q
    |||||||||||||| | |||||| |||||||| ||||||||||||||||||||||    
T  44784141 gttaacatattaaccttataaacgatcatataatacttcaatcacacttaattta 44784087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 106
Target Start/End: Complemental strand, 34110958 - 34110897
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttattt 106  Q
    ||||||||||||||||||||||||||| |||||||| || || || |||||||| |||||||    
T  34110958 aaaagttaacatattaacatgataaacgatcatataatattttaagcacacttactttattt 34110897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 107
Target Start/End: Original strand, 49735520 - 49735621
Alignment:
Q  6 tttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatt 105  Q
    ||||||||||||||||||| ||  ||||  | | | || |||||||||| |||||||||||||||| || ||||| || ||| ||||||||| |||||||    
T  49735520 tttcatttttaaattacggacaacatgaaatgtcttttaaaaagttaacctattaacatgataaacgataatataatatttctatcacacttgatttatt 49735619  T
Q  106 tt 107  Q
    ||    
T  49735620 tt 49735621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 47433800 - 47433861
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||| |||| ||| |||||| |||||| |||||||| ||||||||||||||||||||||||||    
T  47433800 aaaaattaaaataataacat-ataaacgatcatataatacttcaatcacacttaatttatttt 47433861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 93
Target Start/End: Original strand, 24565437 - 24565485
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcac 93  Q
    |||||||||| ||||||| |||||||||| |||||| ||||||||||||    
T  24565437 aaaagttaacttattaacgtgataaacaaacatataatacttcaatcac 24565485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 107
Target Start/End: Complemental strand, 54494769 - 54494729
Alignment:
Q  67 taaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||||||||||||| |||||||||||||||||| |||||||    
T  54494769 taaacaatcatataatacttcaatcacacttaacttatttt 54494729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 107
Target Start/End: Original strand, 47846161 - 47846208
Alignment:
Q  60 aacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||||| ||||||||| ||||||||  ||||||||||||||||    
T  47846161 aacatgataaataatcatataatacttcaaaaacacttaatttatttt 47846208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 103
Target Start/End: Original strand, 54745011 - 54745054
Alignment:
Q  60 aacatgataaacaatcatatagtacttcaatcacacttaattta 103  Q
    |||||||||||  |||| ||||||||||||||||||||||||||    
T  54745011 aacatgataaatgatcacatagtacttcaatcacacttaattta 54745054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 41174498 - 41174436
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||||||| ||||||||||| |||||  |||||||| ||| ||||||||| || |||||||||    
T  41174498 aaaagttagcatattaacataataaatgatcatataatacatcaatcacatttgatttatttt 41174436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 107
Target Start/End: Complemental strand, 56135890 - 56135840
Alignment:
Q  57 attaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||||||||  |||||||| ||||||||  ||||||||||||||||    
T  56135890 attaacatgataaatgatcatataatacttcaaaaacacttaatttatttt 56135840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 2247899 - 2247944
Alignment:
Q  50 ttaacatattaacatgataaacaatcatatagtacttcaatcacac 95  Q
    ||||| |||||| |||||||||||| ||||| ||||||||||||||    
T  2247899 ttaacttattaatatgataaacaattatataatacttcaatcacac 2247944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 103
Target Start/End: Complemental strand, 28332948 - 28332899
Alignment:
Q  54 catattaacatgataaacaatcatatagtacttcaatcacacttaattta 103  Q
    ||||||||| || ||||| |||||||| ||||||||||| ||||||||||    
T  28332948 catattaacctggtaaacgatcatataatacttcaatcatacttaattta 28332899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 105
Target Start/End: Original strand, 21695008 - 21695040
Alignment:
Q  73 atcatatagtacttcaatcacacttaatttatt 105  Q
    |||||||| ||||||||||||||||||||||||    
T  21695008 atcatataatacttcaatcacacttaatttatt 21695040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 6e-27; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 8529996 - 8529891
Alignment:
Q  1 ttacatttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaat 100  Q
    |||| ||||||||||||||||||| ||||||||  | | | || ||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||    
T  8529996 ttacttttcatttttaaattacggacactatgaaatattttttaaaaagttaacatattaacatggtaaacgatcatataatacttcaatcacacttaat 8529897  T
Q  101 ttattt 106  Q
    ||||||    
T  8529896 ttattt 8529891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 107
Target Start/End: Original strand, 50744331 - 50744434
Alignment:
Q  5 atttcatttttaaattacggtcactatgatttttgtcttcaaa-agttaacatattaacatgataaacaatcatatagtacttcaatcacacttaattta 103  Q
    |||||||||||||||||||| ||||||||  | | | || ||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  50744331 atttcatttttaaattacggacactatgaaatgtttttttaaagagttaacatattaacatgataaacgatcatataatacttcaatcacacttaattta 50744430  T
Q  104 tttt 107  Q
    ||||    
T  50744431 tttt 50744434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 40094980 - 40095086
Alignment:
Q  1 ttacatttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaat 100  Q
    |||| ||||||||||||||||||| ||||||||  | | |  | ||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  40094980 ttacttttcatttttaaattacggacactatgaaatgttttataaaaagttaacaaattaacatgataaacgatcatataatacttcaatcacacttaat 40095079  T
Q  101 ttatttt 107  Q
    |||||||    
T  40095080 ttatttt 40095086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 41498601 - 41498498
Alignment:
Q  1 ttacatttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaat 100  Q
    |||| ||||||||||||||||||| ||||||||  | | |  | ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||     
T  41498601 ttacttttcatttttaaattacggacactatgaaatgttttataaaaagttaacatattaacatgataaacgatcatataatacttcaatcacacttaac 41498502  T
Q  101 ttat 104  Q
    ||||    
T  41498501 ttat 41498498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 45585776 - 45585838
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  45585776 aaaagttaacatattaacatgataaacgatcatatagtacttcgatcacacttaatttatttt 45585838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 51597821 - 51597759
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  51597821 aaaagttaacatattaagatgataaacaatcatataatacttcaatcacacttaatttatttt 51597759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 107
Target Start/End: Original strand, 32951370 - 32951471
Alignment:
Q  6 tttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatt 105  Q
    ||||||||||||||||||| ||| ||||  | | |  | ||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||    
T  32951370 tttcatttttaaattacggacacaatgaaatgttttataaaaagttaacatattaacatgataaacgatcgtataatacttcaatcacacttaatttatt 32951469  T
Q  106 tt 107  Q
    ||    
T  32951470 tt 32951471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 49946642 - 49946741
Alignment:
Q  8 tcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||||||||||| |||||| |  | | | || ||||||||||||||||||||||||||  |||||||| ||||||||||||| ||||||||||||    
T  49946642 tcatttttaaattacggacactataaaatatttttttaaaagttaacatattaacatgataaattatcatataatacttcaatcacatttaatttatttt 49946741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 46 - 108
Target Start/End: Complemental strand, 42230690 - 42230628
Alignment:
Q  46 aaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttattttt 108  Q
    |||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  42230690 aaagttaaaatattaacataataaacaatcatataatacttcaatcacacttaatttattttt 42230628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 45 - 138
Target Start/End: Original strand, 2859023 - 2859114
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttttnnnnnnnncatgttatatagtccgtaattt 138  Q
    ||||||||||||| | |||| ||||||||||||||| |||||||||||||||||||||||||||        ||||||||||||||||||||||    
T  2859023 aaaagttaacatacttacattataaacaatcatataatacttcaatcacacttaatttattttt--gaaaaacatgttatatagtccgtaattt 2859114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 36285628 - 36285727
Alignment:
Q  8 tcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||||||||||  |||||| |  | | | || ||||||||||||||||||||||||||| |||||||| |||||||||||||||| || ||||||    
T  36285628 tcatttttaaattacgaacactataaaatattttttaaaaagttaacatattaacatgataaacgatcatataatacttcaatcacacttgatatatttt 36285727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 30010529 - 30010423
Alignment:
Q  1 ttacatttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaat 100  Q
    |||| ||||||||| ||||||||| ||||| ||  | | | || || ||||||||||||||||| |||||| |||||||| |||||||| ||||||||||    
T  30010529 ttacttttcattttgaaattacggacactacgaaatgttttttaaatagttaacatattaacattataaacgatcatataatacttcaaccacacttaat 30010430  T
Q  101 ttatttt 107  Q
    |||||||    
T  30010429 ttatttt 30010423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 35349553 - 35349615
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| || |||| ||||||||    
T  35349553 aaaagttaacatattaacatgataaacaatcatataatacttcaataacccttagtttatttt 35349615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 41676478 - 41676370
Alignment:
Q  1 ttacatttcatttttaaattacggtcactatga----tttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacact 96  Q
    |||| ||||||||||||||||||| |||||| |    ||||| | || |||  |||||||||||||||||||||| |||||||| |||| ||||||||||    
T  41676478 ttacttttcatttttaaattacggacactataaaatgtttttttttttaaa--ttaacatattaacatgataaacgatcatataatactacaatcacact 41676381  T
Q  97 taatttatttt 107  Q
    |||||||||||    
T  41676380 taatttatttt 41676370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 107
Target Start/End: Original strand, 38509946 - 38510047
Alignment:
Q  6 tttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatt 105  Q
    ||||||||||||||||||| ||||||||  | | | || |||| ||||||| |||||| ||||||| || ||||| |||||||||||||||| |||||||    
T  38509946 tttcatttttaaattacggacactatgaaatgtcttttaaaaaattaacatcttaacacgataaacgataatataatacttcaatcacacttgatttatt 38510045  T
Q  106 tt 107  Q
    ||    
T  38510046 tt 38510047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 10392025 - 10391963
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||||||||||||||||||||||||||  ||||||| ||||| ||||||| ||||||||||||    
T  10392025 aaaagttaacatattaacatgataaacggtcatataatactttaatcacaattaatttatttt 10391963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 7444648 - 7444596
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacactt 97  Q
    |||||||||||||||||||| |||||| |||||||| ||||||||||||||||    
T  7444648 aaaagttaacatattaacataataaacgatcatataatacttcaatcacactt 7444596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 107
Target Start/End: Original strand, 42742416 - 42742463
Alignment:
Q  60 aacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||    
T  42742416 aacatgataaatagtcatatagtacttcaatcacacttaatttatttt 42742463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 107
Target Start/End: Original strand, 44211011 - 44211058
Alignment:
Q  60 aacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||    
T  44211011 aacatgataaacgatcatataatacttcaatcacacttaatttatttt 44211058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 26940934 - 26940996
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||||||||| |||||||||  |||||| ||||||| |||||||||||||||| |||||||||    
T  26940934 aaaagttaacttattaacatcgtaaacagtcatataatacttcaatcacacttgatttatttt 26940996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 20576225 - 20576269
Alignment:
Q  48 agttaacatattaacatgataaacaatcatatagtacttcaatca 92  Q
    |||||| ||||||||||||||||| |||||||| |||||||||||    
T  20576225 agttaatatattaacatgataaacgatcatataatacttcaatca 20576269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 6563727 - 6563668
Alignment:
Q  47 aagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||| ||||||||||||||||  |||||||| || |||||| |||| |||||||||||    
T  6563727 aagttaatatattaacatgataaa-gatcatataataattcaatgacacataatttatttt 6563668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 108
Target Start/End: Complemental strand, 51582119 - 51582071
Alignment:
Q  60 aacatgataaacaatcatatagtacttcaatcacacttaatttattttt 108  Q
    |||||||||||  ||||| || ||||||||||||||| |||||||||||    
T  51582119 aacatgataaatgatcatgtaatacttcaatcacactgaatttattttt 51582071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 4e-25; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 1026896 - 1027002
Alignment:
Q  1 ttacatttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaat 100  Q
    |||| ||||||||||||||| ||| ||||||||  | | |  ||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||    
T  1026896 ttacttttcatttttaaattgcggacactatgaaatattttatcaaaagttaacatattaacatgataaacgatcatataatacttcaatcatacttaat 1026995  T
Q  101 ttatttt 107  Q
    |||||||    
T  1026996 ttatttt 1027002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 7503045 - 7503107
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  7503045 aaaagttaacatattaacatgataaacaatcatataatactttaatcacacttaatttatttt 7503107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 100
Target Start/End: Original strand, 9718531 - 9718625
Alignment:
Q  6 tttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaat 100  Q
    ||||||||||||||||||| ||||||||  |   | || |||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||    
T  9718531 tttcatttttaaattacggacactatgaaatggtttttaaaaagttagcatattaacatgataaacaatcatataatacttcaatcacaattaat 9718625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 11575497 - 11575559
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||    
T  11575497 aaaagttaacatattaacatgataaacgatcatataatactttaatcacacttaatttatttt 11575559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 107
Target Start/End: Complemental strand, 28083935 - 28083833
Alignment:
Q  5 atttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttat 104  Q
    ||||| ||||||||||||||  |||||||| | | | || || ||||||||| | ||||||||||||||||||||| |||| ||||||||||||||||||    
T  28083935 atttcttttttaaattacggatactatgatatgttttttaaagagttaacatgtcaacatgataaacaatcatataatactccaatcacacttaatttat 28083836  T
Q  105 ttt 107  Q
    |||    
T  28083835 ttt 28083833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 31543119 - 31543225
Alignment:
Q  1 ttacatttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaat 100  Q
    |||| |||||||||||||||||||  |||||||  | | | |  |||||||||||||||||||| ||||||  ||||||| |||||||||||||||||||    
T  31543119 ttacttttcatttttaaattacggaaactatgaaatgtttttaaaaaagttaacatattaacatcataaacggtcatataatacttcaatcacacttaat 31543218  T
Q  101 ttatttt 107  Q
    |||||||    
T  31543219 ttatttt 31543225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 36308996 - 36308934
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  36308996 aaaagtaaacatattaacatgataaacaatcatataatacttcaatcacacttagtttatttt 36308934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 31738616 - 31738516
Alignment:
Q  5 atttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttat 104  Q
    |||||||||||||||||||| |||||| |  | | | || || |||||||||||||||||||||||  |||||||| ||||||||| |||||||||||||    
T  31738616 atttcatttttaaattacggacactataaaatattttttgaagagttaacatattaacatgataaatgatcatataatacttcaattacacttaatttat 31738517  T
Q  105 t 105  Q
    |    
T  31738516 t 31738516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 104
Target Start/End: Complemental strand, 1281335 - 1281237
Alignment:
Q  6 tttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttat 104  Q
    ||||||||||||||||||| ||||||||  | | | || |||||||||||||||||||| |||||| || ||||| |||||||| ||||||| ||||||    
T  1281335 tttcatttttaaattacggacactatgaaatattttttaaaaagttaacatattaacataataaacgataatataatacttcaaccacacttgatttat 1281237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 37032532 - 37032470
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||||||||||| ||||||||| |||||||| ||||| ||||||||||||||||||||    
T  37032532 aaaagttaacatattaagatgataaactatcatataatactttaatcacacttaatttatttt 37032470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 107
Target Start/End: Complemental strand, 6315254 - 6315153
Alignment:
Q  6 tttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatt 105  Q
    ||||||||||||| ||||| ||||||||  | | | |  |||| ||||||||||||| |||||||| ||| |||| ||||||||||||||||||||||||    
T  6315254 tttcatttttaaaatacggacactatgaaatgtttttaaaaaaattaacatattaacttgataaacgatcgtataatacttcaatcacacttaatttatt 6315155  T
Q  106 tt 107  Q
    ||    
T  6315154 tt 6315153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 107
Target Start/End: Complemental strand, 11785718 - 11785617
Alignment:
Q  6 tttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatt 105  Q
    ||||||||||||||||||| || |||||  | | | || |||||||| |||||||||||||||||||| |||||| |||||||||| || ||||| ||||    
T  11785718 tttcatttttaaattacggacattatgaaatattttttaaaaagttagcatattaacatgataaacaaacatataatacttcaatcgcaattaatgtatt 11785619  T
Q  106 tt 107  Q
    ||    
T  11785618 tt 11785617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 107
Target Start/End: Complemental strand, 16653141 - 16653040
Alignment:
Q  6 tttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatt 105  Q
    ||||||||||||||||||| || |||||  | | | |  |||||||||||||||||||  |||||| |||||||| |||||||||||||||| |||||||    
T  16653141 tttcatttttaaattacggacattatgaaatgtttttgaaaaagttaacatattaacaaaataaacgatcatataatacttcaatcacacttgatttatt 16653042  T
Q  106 tt 107  Q
    ||    
T  16653041 tt 16653040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 30664514 - 30664451
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttattttt 108  Q
    ||||||||||||||||| |||||||||  | ||||| |||||||||||||||||||||||||||    
T  30664514 aaaagttaacatattaatatgataaacggttatataatacttcaatcacacttaatttattttt 30664451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 107
Target Start/End: Original strand, 40990278 - 40990337
Alignment:
Q  48 agttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||||||||||||||||||||| | |||||||| ||||||||||| ||||||||||||||    
T  40990278 agttaacatattaacatgataagcgatcatataatacttcaatcagacttaatttatttt 40990337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 29691013 - 29691067
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaa 99  Q
    ||||||||||||||||||||||||||| |||||||  ||||||||||||||||||    
T  29691013 aaaagttaacatattaacatgataaacgatcatatgatacttcaatcacacttaa 29691067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 33922673 - 33922611
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||||| ||| ||||||||||    
T  33922673 aaaagttaacatattatcatgataaacaatcatatcatacttcaatcatactaaatttatttt 33922611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 61 - 107
Target Start/End: Original strand, 42650443 - 42650489
Alignment:
Q  61 acatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  42650443 acatgataaacaatcatataatacttcaatcacacttaatttatttt 42650489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 107
Target Start/End: Original strand, 30479769 - 30479870
Alignment:
Q  6 tttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatt 105  Q
    ||||||||||||||||| | ||||||||  | | | || |||||||||||||||||  |||||||  || ||||| |||||||||||||||| |||||||    
T  30479769 tttcatttttaaattacagacactatgaaatgtcttttaaaaagttaacatattaaggtgataaatgataatataatacttcaatcacacttgatttatt 30479868  T
Q  106 tt 107  Q
    ||    
T  30479869 tt 30479870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 4247610 - 4247670
Alignment:
Q  47 aagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||||||||||||| |||||||||| |||||||| ||||| ||||| ||||||||||||||    
T  4247610 aagttaacatattagcatgataaacgatcatataatacttaaatcatacttaatttatttt 4247670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 105
Target Start/End: Original strand, 29358430 - 29358490
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatt 105  Q
    |||| ||||||||||||||| |||||| ||| |||| ||||||||||||||||||||||||    
T  29358430 aaaaattaacatattaacattataaacgatcctataatacttcaatcacacttaatttatt 29358490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 107
Target Start/End: Original strand, 41103611 - 41103659
Alignment:
Q  59 taacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  41103611 taacatgataaacgatcatataatacttcaatcacacttaatttatttt 41103659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 11033570 - 11033508
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||| |||||||||||||||||||||| |||||||| |  ||||||||||| |||||||||||    
T  11033570 aaaaattaacatattaacatgataaacgatcatataattattcaatcacacataatttatttt 11033508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 7979337 - 7979231
Alignment:
Q  1 ttacatttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaat 100  Q
    |||| ||||||||||||||||||| |||  |||  | | | || |||  ||||| ||||||||||||||| ||||||||| |||||||||  ||||| ||    
T  7979337 ttacttttcatttttaaattacggacaccgtgaaatgtttattaaaagtttaacttattaacatgataaataatcatataatacttcaattgcacttgat 7979238  T
Q  101 ttatttt 107  Q
    |||||||    
T  7979237 ttatttt 7979231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 37923125 - 37923231
Alignment:
Q  1 ttacatttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaat 100  Q
    |||| |||||||||||||||| |  ||||||||  | | | || || |||||| ||||||||||||||||  |||||||| || || |||| ||||||||    
T  37923125 ttacttttcatttttaaattatgaacactatgaaatgttttttaaagagttaaaatattaacatgataaatgatcatataatattttaatcgcacttaat 37923224  T
Q  101 ttatttt 107  Q
    |||||||    
T  37923225 ttatttt 37923231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 2248640 - 2248543
Alignment:
Q  10 atttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||||||||| ||||||||  | | | || |||||||||| |||||||||  |||||  ||||||| || | ||||||||||| |||||||||    
T  2248640 atttttaaattacggacactatgaaatatttttttaaaagttaacttattaacatcgtaaacggtcatataatattccaatcacacttgatttatttt 2248543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 106
Target Start/End: Original strand, 24243152 - 24243199
Alignment:
Q  59 taacatgataaacaatcatatagtacttcaatcacacttaatttattt 106  Q
    ||||||||||||  |||||||| |||||||||||||||||||| ||||    
T  24243152 taacatgataaatgatcatataatacttcaatcacacttaattaattt 24243199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 107
Target Start/End: Original strand, 30581916 - 30581963
Alignment:
Q  60 aacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||||||||||  |||||||| ||||||||||||||||||||| ||||    
T  30581916 aacatgataaatgatcatataatacttcaatcacacttaatttgtttt 30581963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 34634331 - 34634261
Alignment:
Q  10 atttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatata 80  Q
    ||||||||||||||| ||||||||  | | | || ||||||||||||||||||||  |||||||| |||||    
T  34634331 atttttaaattacggacactatgaaatatcttttaaaaagttaacatattaacattgtaaacaataatata 34634261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 4e-25; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 4097559 - 4097665
Alignment:
Q  1 ttacatttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaat 100  Q
    |||| ||| ||||||||||||||| |||| |||  | | | || ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  4097559 ttacttttaatttttaaattacggacactttgaaatgttttttaaaaagttaacatattaacatgataaacgatcatataatacttcaatcacacttaat 4097658  T
Q  101 ttatttt 107  Q
    |||||||    
T  4097659 ttatttt 4097665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 33236147 - 33236042
Alignment:
Q  1 ttacatttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaat 100  Q
    |||| ||||||||||||||||||| ||||||||  ||| | || |||||||||||||||||||||||||||||||||||| | |||||||||  ||||||    
T  33236147 ttacttttcatttttaaattacggacactatgaaattttt-ttaaaaagttaacatattaacatgataaacaatcatataattcttcaatcagtcttaat 33236049  T
Q  101 ttatttt 107  Q
    |||||||    
T  33236048 ttatttt 33236042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 1300817 - 1300714
Alignment:
Q  1 ttacatttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaat 100  Q
    |||| ||||||||||||||||||| || |||||  | | |  | |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  1300817 ttacttttcatttttaaattacggacaatatgaaatattttataaaaagttaacatattaacctgataaacaatcatataatacttcaatcacacttaat 1300718  T
Q  101 ttat 104  Q
    ||||    
T  1300717 ttat 1300714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 9719083 - 9719180
Alignment:
Q  6 tttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaattta 103  Q
    ||||||||||||||||||| |||||||   | | | || |||||||||||||||||  ||||||||||||||||| ||||||||||||||| ||||||    
T  9719083 tttcatttttaaattacggacactatggaatgttttttaaaaagttaacatattaatttgataaacaatcatataatacttcaatcacactaaattta 9719180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 107
Target Start/End: Complemental strand, 31849302 - 31849201
Alignment:
Q  6 tttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatt 105  Q
    ||||||||||||||||||| |||||| |  | | | || |||| ||||||||||||| ||||||||||| ||||| |||||||||||||||| |||||||    
T  31849302 tttcatttttaaattacggacactataaaatgtcttttaaaaaattaacatattaacgtgataaacaataatataatacttcaatcacacttgatttatt 31849203  T
Q  106 tt 107  Q
    ||    
T  31849202 tt 31849201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 9721190 - 9721280
Alignment:
Q  6 tttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacact 96  Q
    ||||||||||||||||||| |||||||   | | | || |||||||||||||||||  ||||||||||||||||| |||||||||||||||    
T  9721190 tttcatttttaaattacggacactatggaatgttttttaaaaagttaacatattaatttgataaacaatcatataatacttcaatcacact 9721280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 21606891 - 21606997
Alignment:
Q  1 ttacatttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaat 100  Q
    |||| |||||||||||||||||||  |||||||  | | |  | ||||||||||||||||||||||||||| ||| |||| ||||||| |||||||| ||    
T  21606891 ttacttttcatttttaaattacggaaactatgaaatgttttataaaaagttaacatattaacatgataaacgatcgtataatacttcagtcacactttat 21606990  T
Q  101 ttatttt 107  Q
    |||||||    
T  21606991 ttatttt 21606997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 30487396 - 30487458
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||||| ||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  30487396 aaaagtcaacatattaacatgataaacaataatataatacttcaatcacacttgatttatttt 30487458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 107
Target Start/End: Complemental strand, 34176527 - 34176426
Alignment:
Q  6 tttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatt 105  Q
    ||||||||||||||||||| ||||||||  | | | ||  ||||||||||||||||||| |||||| ||| |||| |||| ||||||||||| |||||||    
T  34176527 tttcatttttaaattacggacactatgaaatattttttttaaagttaacatattaacataataaacgatcgtataatactgcaatcacacttgatttatt 34176428  T
Q  106 tt 107  Q
    ||    
T  34176427 tt 34176426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 1390516 - 1390411
Alignment:
Q  1 ttacatttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaat 100  Q
    |||| ||||||||||||||||| | ||||||||  | | | || ||||||||||||||||||||||||||  |||| ||| || |||||||| |||||||    
T  1390516 ttacttttcatttttaaattactgacactatgaaatattttttaaaaagttaacatattaacatgataaatgatca-ataatatttcaatcaaacttaat 1390418  T
Q  101 ttatttt 107  Q
    |||||||    
T  1390417 ttatttt 1390411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 10818413 - 10818315
Alignment:
Q  1 ttacatttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaa 99  Q
    |||| ||||||||||||||||||| ||||||||  | | | || |||  |||||||||||||||||||||  |||||||| ||||||||||||| ||||    
T  10818413 ttacttttcatttttaaattacggacactatgaaatgttttttaaaatattaacatattaacatgataaatgatcatataatacttcaatcacatttaa 10818315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 2892694 - 2892756
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||| |||| ||| |||||||||||||||||||||| || |||||||||||| ||||||||||    
T  2892694 aaaaattaaaataataacatgataaacaatcatataatatttcaatcacactaaatttatttt 2892756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 107
Target Start/End: Original strand, 5585354 - 5585455
Alignment:
Q  6 tttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatt 105  Q
    |||| |||||||||||||  ||||||||  | | | || ||||| |||||||||||||| |||||| || ||| | || |||||||||||||||||||||    
T  5585354 tttcttttttaaattacgaacactatgaaatgttttttaaaaaggtaacatattaacataataaacgattatacaatatttcaatcacacttaatttatt 5585453  T
Q  106 tt 107  Q
    ||    
T  5585454 tt 5585455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 12811085 - 12811133
Alignment:
Q  58 ttaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  12811085 ttaacatgataaacaatcatatc-tacttcaatcacacttaatttatttt 12811133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 91
Target Start/End: Complemental strand, 2900061 - 2900017
Alignment:
Q  47 aagttaacatattaacatgataaacaatcatatagtacttcaatc 91  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||    
T  2900061 aagttaacatattaacatgataaacaatcatataatacatcaatc 2900017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 107
Target Start/End: Complemental strand, 14515621 - 14515562
Alignment:
Q  48 agttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||||| |||||||||||  || ||||| ||||||| ||||||||||||||||||    
T  14515621 agttaacatatgaacatgataaatgataatataatacttcattcacacttaatttatttt 14515562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 32926784 - 32926737
Alignment:
Q  59 taacatgataaacaatcatatagtacttcaatcacacttaatttattt 106  Q
    ||||||||||||  |||||||| |||||||||||||||||||||||||    
T  32926784 taacatgataaatgatcatataatacttcaatcacacttaatttattt 32926737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 1395789 - 1395727
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||| ||||||||||| |||||||||  ||||| || || |||||||||||||||||||||||    
T  1395789 aaaaattaacatattagcatgataaatgatcatgtattatttcaatcacacttaatttatttt 1395727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 13583872 - 13583810
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||| ||||||| ||||||| |||||  |||||||| || |||||||||||||||||||||||    
T  13583872 aaaaattaacatgttaacataataaatgatcatataatatttcaatcacacttaatttatttt 13583810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 25741560 - 25741498
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||||||| ||| ||||||||| ||||||||  |||||| |||| |||||||||||||    
T  25741560 aaaagttaacataataatatgataaacgatcatataaaacttcagtcacgcttaatttatttt 25741498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 107
Target Start/End: Original strand, 665937 - 665994
Alignment:
Q  50 ttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||||||||||||||||||||  || ||||| |||||||| |||||||||||| ||||    
T  665937 ttaacatattaacatgataaatgatgatataatacttcaaccacacttaatttttttt 665994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 107
Target Start/End: Original strand, 10348850 - 10348951
Alignment:
Q  6 tttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatt 105  Q
    |||||||||||||||||||  | |||||  | | | || ||||||||||||||||| | ||||||| || ||||| |||||||||| ||||| | |||||    
T  10348850 tttcatttttaaattacggataatatgaaatatcttttaaaaagttaacatattaatacgataaacgataatataatacttcaatcgcacttgaattatt 10348949  T
Q  106 tt 107  Q
    ||    
T  10348950 tt 10348951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 107
Target Start/End: Original strand, 19278139 - 19278191
Alignment:
Q  55 atattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||||||||||| |||||||  ||||||||||| ||| ||||||||||    
T  19278139 atattaacatgataaacgatcatatgatacttcaatcagactaaatttatttt 19278191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 32922484 - 32922437
Alignment:
Q  59 taacatgataaacaatcatatagtacttcaatcacacttaatttattt 106  Q
    |||||||||||| ||||||||| |||||| |||||||||||| |||||    
T  32922484 taacatgataaataatcatataatacttcgatcacacttaatatattt 32922437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 96
Target Start/End: Original strand, 2892948 - 2892985
Alignment:
Q  59 taacatgataaacaatcatatagtacttcaatcacact 96  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  2892948 taacatgataaacgatcatataatacttcaatcacact 2892985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 194
Target Start/End: Complemental strand, 15323268 - 15323231
Alignment:
Q  157 ctctcctcccttccccttccaaaccctcaatccaaaca 194  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  15323268 ctctcctcccttcccctcctaaaccctcaatccaaaca 15323231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 194
Target Start/End: Complemental strand, 15353407 - 15353370
Alignment:
Q  157 ctctcctcccttccccttccaaaccctcaatccaaaca 194  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  15353407 ctctcctcccttcccctcctaaaccctcaatccaaaca 15353370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 108
Target Start/End: Complemental strand, 3023650 - 3023602
Alignment:
Q  60 aacatgataaacaatcatatagtacttcaatcacacttaatttattttt 108  Q
    ||||||||||| ||||||||| || |||| |||||||||||||| ||||    
T  3023650 aacatgataaataatcatataatatttcattcacacttaatttagtttt 3023602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 33041650 - 33041590
Alignment:
Q  10 atttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaa 70  Q
    |||||||||||||||  |||||||  | | | || ||||||||||||||||||||||||||    
T  33041650 atttttaaattacggatactatgaaatgttttttaaaaagttaacatattaacatgataaa 33041590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 107
Target Start/End: Complemental strand, 7544328 - 7544227
Alignment:
Q  6 tttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatt 105  Q
    ||||||||||||||||||| ||||||||  | | | || |||||||| ||||||||||| ||||||||||||||| |||||||||||||||| |||||||    
T  7544328 tttcatttttaaattacggacactatgaaatgttttttaaaaagttagcatattaacataataaacaatcatataatacttcaatcacacttgatttatt 7544229  T
Q  106 tt 107  Q
    ||    
T  7544228 tt 7544227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 6 - 101
Target Start/End: Original strand, 20146918 - 20147013
Alignment:
Q  6 tttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatt 101  Q
    ||||||||||||||||||||||||||||  | | | || ||||||||||||||||||||||||| | |||||||| || |||||||||||||||||    
T  20146918 tttcatttttaaattacggtcactatgaaatgttttttaaaaagttaacatattaacatgataagcgatcatataatatttcaatcacacttaatt 20147013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 13634908 - 13634802
Alignment:
Q  1 ttacatttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaat 100  Q
    |||| ||||||||||||||||||  ||||||||  | | | || ||||||||||||||||||||||||||| |||||||| || ||||||||||| ||||    
T  13634908 ttacttttcatttttaaattacgaacactatgaaatgttttttaaaaagttaacatattaacatgataaacgatcatataataattcaatcacacataat 13634809  T
Q  101 ttatttt 107  Q
    |||||||    
T  13634808 ttatttt 13634802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 36392197 - 36392303
Alignment:
Q  1 ttacatttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaat 100  Q
    |||| ||||||||||||||||| | ||||||||  | | |  | ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  36392197 ttacttttcatttttaaattacagacactatgaaatgttttataaaaagttaacatattaacatgataaacgatcatataatacttcaatcacacttaat 36392296  T
Q  101 ttatttt 107  Q
     ||||||    
T  36392297 ctatttt 36392303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 107
Target Start/End: Complemental strand, 9857072 - 9856971
Alignment:
Q  6 tttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatt 105  Q
    |||||||||||| |||||| ||||||||  | | | || |||||||||||||||||||| |||||| |||||||| |||||||||||||||| |||||||    
T  9857072 tttcatttttaagttacggacactatgaaatgttttttaaaaagttaacatattaacataataaacgatcatataatacttcaatcacacttgatttatt 9856973  T
Q  106 tt 107  Q
    ||    
T  9856972 tt 9856971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 4373613 - 4373720
Alignment:
Q  1 ttacatttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaat 100  Q
    |||| ||| ||||||||||||||| |||| |||  | | | || ||||||||||||||||||||||||||  |||||||| || ||||||||||||||||    
T  4373613 ttacttttaatttttaaattacggacactgtgaaatatttttttaaaagttaacatattaacatgataaatgatcatataatatttcaatcacacttaat 4373712  T
Q  101 ttattttt 108  Q
    ||||||||    
T  4373713 ttattttt 4373720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 37551560 - 37551497
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttattttt 108  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||    
T  37551560 aaaagttaacatattaacatgataaacgatcatataatacttcaatcacacataatttattttt 37551497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 37654390 - 37654327
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttattttt 108  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||    
T  37654390 aaaagttaacatattaacatgataaacgatcatataatacttcaatcacacataatttattttt 37654327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 10072738 - 10072800
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||    
T  10072738 aaaagttaacatattaacatgataaacgatcatataatacttcaatcatacttaatttatttt 10072800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 28279523 - 28279629
Alignment:
Q  1 ttacatttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaat 100  Q
    |||| |||||||||||||||| || || |||||  | | | || ||||||||||||||||||||||||||  |||||||| ||||||||||||||||| |    
T  28279523 ttacttttcatttttaaattatggacattatgaaatgttttttaaaaagttaacatattaacatgataaatgatcatataatacttcaatcacacttagt 28279622  T
Q  101 ttatttt 107  Q
    |||||||    
T  28279623 ttatttt 28279629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 107
Target Start/End: Complemental strand, 16938672 - 16938570
Alignment:
Q  5 atttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttat 104  Q
    |||||||||||||||||| | ||||||||  | | | || || ||||||||| |||||||||||||  |||||||| || ||||||||||||||||||||    
T  16938672 atttcatttttaaattactgacactatgaaatgttttttaaagagttaacatgttaacatgataaatgatcatataatatttcaatcacacttaatttat 16938573  T
Q  105 ttt 107  Q
    |||    
T  16938572 ttt 16938570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 26415046 - 26414984
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||||||||||||||||||||| | |||||| ||||||||||||||||||| ||||||    
T  26415046 aaaagttaacatattaacatgataaacgaccatataatacttcaatcacacttaatatatttt 26414984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 37607047 - 37606985
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||  |||||||||||    
T  37607047 aaaagttaacatattaacatgataaacgatcatataatacttcaatcacatataatttatttt 37606985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 37779256 - 37779194
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||  |||||||||||    
T  37779256 aaaagttaacatattaacatgataaacgatcatataatacttcaatcacatataatttatttt 37779194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 107
Target Start/End: Original strand, 8502887 - 8502988
Alignment:
Q  6 tttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatt 105  Q
    ||||||||||||||||||| || |||||  | | | || ||||||||||| ||||| |||||| ||||| | ||| ||||||||||||||||||||||||    
T  8502887 tttcatttttaaattacggacattatgaaatattttttaaaaagttaacaaattaatatgatacacaattacataatacttcaatcacacttaatttatt 8502986  T
Q  106 tt 107  Q
    ||    
T  8502987 tt 8502988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 107
Target Start/End: Original strand, 16501842 - 16501943
Alignment:
Q  6 tttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatt 105  Q
    ||||||||||||||||||| || |||||  | | | || |||||||||||||||||||| |||||  ||||||||  |||| |||||||||| |||||||    
T  16501842 tttcatttttaaattacggacattatgaaatgtttttttaaaagttaacatattaacataataaatgatcatataaaactttaatcacacttgatttatt 16501941  T
Q  106 tt 107  Q
    ||    
T  16501942 tt 16501943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 20513492 - 20513602
Alignment:
Q  1 ttacatttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatag----tacttcaatcacact 96  Q
    |||| ||||||||||||| ||| | ||||||||  | | | || |||||||||||||||| |||||||||| ||||||||     |||||||||||||||    
T  20513492 ttacttttcatttttaaactacagacactatgaaatgttttttaaaaagttaacatattatcatgataaacgatcatatatataatacttcaatcacact 20513591  T
Q  97 taatttatttt 107  Q
    |||||||||||    
T  20513592 taatttatttt 20513602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 10476174 - 10476119
Alignment:
Q  52 aacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||||||||| ||||||||| || ||||| ||||||||||||||||||||||||||    
T  10476174 aacatattaagatgataaacgattatataatacttcaatcacacttaatttatttt 10476119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 17024315 - 17024377
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||||||| ||||||||||||| |||| |||||||| ||||||||||  ||||||||||||||    
T  17024315 aaaagttatcatattaacatgaaaaacgatcatataatacttcaatcgtacttaatttatttt 17024377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 2550399 - 2550503
Alignment:
Q  1 ttacatttcatttttaaattacggtcactatgatttttgtcttcaaa-agttaacatattaacatgataaacaatcatatagtacttcaatcacacttaa 99  Q
    |||| ||||||||||||||||| | ||||||||| | | | || ||| | |||| ||| || ||||||||||||||||||| |||||||||||||| |||    
T  2550399 ttacttttcatttttaaattacagacactatgatatgtttttttaaacaattaaaataata-catgataaacaatcatataatacttcaatcacacgtaa 2550497  T
Q  100 tttatt 105  Q
    ||||||    
T  2550498 tttatt 2550503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 9798659 - 9798764
Alignment:
Q  1 ttacatttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaat 100  Q
    |||| |||||||||||||||||||  |||| ||  | | | || |||||| || || ||||||||| |||| |||||||| ||||||||||||| |||||    
T  9798659 ttacttttcatttttaaattacggatactacgaaatgttttttaaaaagtcaatattttaacatgaaaaacgatcatataatacttcaatcacaattaat 9798758  T
Q  101 ttattt 106  Q
    ||||||    
T  9798759 ttattt 9798764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 107
Target Start/End: Complemental strand, 36363184 - 36363123
Alignment:
Q  46 aaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||||||||| ||||||||||||| |||||  |||||||| |||||| |||||||||    
T  36363184 aaagttaacatattagcatgataaacaatgatataaaacttcaatgacacttgatttatttt 36363123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 11757024 - 11756968
Alignment:
Q  51 taacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||||||||||||| |||||  |||||||| ||||| ||||||||||||||||||||    
T  11757024 taacatattaacatcataaatgatcatataatactttaatcacacttaatttatttt 11756968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 55 - 107
Target Start/End: Complemental strand, 14681612 - 14681560
Alignment:
Q  55 atattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||||||||||||||||| ||||||| | ||||||||||| ||||||||||||    
T  14681612 atattaacatgataaacagtcatatattccttcaatcacatttaatttatttt 14681560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 52 - 108
Target Start/End: Original strand, 29002304 - 29002360
Alignment:
Q  52 aacatattaacatgataaacaatcatatagtacttcaatcacacttaatttattttt 108  Q
    |||||||||||||||||||| |||||||| |||| |||||| | |||||||||||||    
T  29002304 aacatattaacatgataaacgatcatataatactacaatcatatttaatttattttt 29002360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 80
Target Start/End: Complemental strand, 22023520 - 22023485
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatata 80  Q
    ||||||||||||||||||||||||||| ||||||||    
T  22023520 aaaagttaacatattaacatgataaacgatcatata 22023485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 107
Target Start/End: Complemental strand, 20409795 - 20409750
Alignment:
Q  62 catgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||||||||| |||||| ||||||| |||||||||||||| |||||    
T  20409795 catgataaacgatcataaagtacttaaatcacacttaattcatttt 20409750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 6e-24; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 15224741 - 15224845
Alignment:
Q  1 ttacatttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaat 100  Q
    |||| ||||||||||||||||||| ||||||||  | | | || ||||| ||||||||||||||||||||  |||||||| |||||||||||||||||||    
T  15224741 ttacttttcatttttaaattacggacactatgaaatgttttttaaaaagctaacatattaacatgataaatgatcatataatacttcaatcacacttaat 15224840  T
Q  101 ttatt 105  Q
    |||||    
T  15224841 ttatt 15224845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 108
Target Start/End: Complemental strand, 23748287 - 23748185
Alignment:
Q  6 tttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatt 105  Q
    ||||||||||||| ||||| ||||||||  | | | || ||||||||||||||||||||||||||| || ||||| |||||||||||||||| |||||||    
T  23748287 tttcatttttaaactacggacactatgaaatgtcttttaaaaagttaacatattaacatgataaacgataatataatacttcaatcacacttgatttatt 23748188  T
Q  106 ttt 108  Q
    |||    
T  23748187 ttt 23748185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 34209661 - 34209560
Alignment:
Q  1 ttacatttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaat 100  Q
    |||| |||||||||||||||||   ||||||||  | | | || ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  34209661 ttacttttcatttttaaattacaaacactatgaaatattttttaaaaagttaacatattaacatgataaacaatcatataacacttcaatcacacttaat 34209562  T
Q  101 tt 102  Q
    ||    
T  34209561 tt 34209560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 107
Target Start/End: Original strand, 36347593 - 36347694
Alignment:
Q  6 tttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatt 105  Q
    ||||||||||| |||||||  |||||||  | | | || || ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  36347593 tttcatttttatattacggatactatgacatattttttaaatagttaacatattaacatgataaacaattatataatacttcaatcacacttaatttatt 36347692  T
Q  106 tt 107  Q
    ||    
T  36347693 tt 36347694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 107
Target Start/End: Complemental strand, 17379994 - 17379903
Alignment:
Q  16 aaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||| ||||||||  | | | || |||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  17379994 aaattacggacactatgaaatgttttttaaaaagttagcatattaacatgataaacaatcatataatactccaatcacacttaatttatttt 17379903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 2241563 - 2241501
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  2241563 aaaatttaacatattaacatgataaacaatcatataatacttcaattacacttaatttatttt 2241501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 12541919 - 12541857
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  12541919 aaaagttaacacattaacatgataaacgatcatatagtacttcaatcgcacttaatttatttt 12541857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 37739982 - 37740044
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  37739982 aaaagttaagatattaacatgataaacgatcatataatacttcaatcacacttaatttatttt 37740044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 39732820 - 39732882
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||    
T  39732820 aaaagttaacatattaacatgataaacgatcatataatacttcaatcatacttaatttatttt 39732882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 16565930 - 16565868
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||||||||||||| || ||||||||| |||||||| ||||||||||||||||||||||||||    
T  16565930 aaaagttaacatataaatatgataaacgatcatataatacttcaatcacacttaatttatttt 16565868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 40022570 - 40022461
Alignment:
Q  1 ttacatttcatttttaaattacggtcactatgattt-ttgtcttcaaaagttaacatatta--acatgataaacaatcatatagtacttcaatcacactt 97  Q
    |||||||||||||||||||||| | ||||||||  | || | || |||||| |||||||||  | ||| |||||||||||||| ||||||||||||||||    
T  40022570 ttacatttcatttttaaattacagacactatgaaatgtttttttaaaaagtaaacatattataatatgttaaacaatcatataatacttcaatcacactt 40022471  T
Q  98 aatttatttt 107  Q
    ||||||||||    
T  40022470 aatttatttt 40022461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 36566897 - 36567002
Alignment:
Q  1 ttacatttcatttttaaattacggtcactatgatttttgtct-tcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaa 99  Q
    |||| ||||||||||||||||||| || |||||   || | | | ||||||||||||||||||||||||||  |||||||| ||||||||||||| ||||    
T  36566897 ttacttttcatttttaaattacggacattatgaaagttttttataaaaagttaacatattaacatgataaatgatcatataatacttcaatcacaattaa 36566996  T
Q  100 tttatt 105  Q
    ||||||    
T  36566997 tttatt 36567002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 42316855 - 42316909
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaa 99  Q
    |||||||||| |||||||||||||||| |||||||| ||||||||||||||||||    
T  42316855 aaaagttaacgtattaacatgataaacgatcatataatacttcaatcacacttaa 42316909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 45 - 106
Target Start/End: Complemental strand, 9631713 - 9631652
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttattt 106  Q
    ||||||||||||||||||||||||||| || ||||| ||||||| |||||||| ||||||||    
T  9631713 aaaagttaacatattaacatgataaacgataatataatacttcattcacacttgatttattt 9631652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 107
Target Start/End: Complemental strand, 18811467 - 18811419
Alignment:
Q  59 taacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||    
T  18811467 taacatgataaacaatcatataatatttcaatcacacttaatttatttt 18811419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 107
Target Start/End: Original strand, 31795875 - 31795922
Alignment:
Q  60 aacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||    
T  31795875 aacatgataaacgatcatataatacttcaatcacacttaatttatttt 31795922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 19566912 - 19566974
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||||||| |||||||| |||||||||  || |||| ||||||||||||||||||||||||||    
T  19566912 aaaagttagcatattaaaatgataaacggtcgtataatacttcaatcacacttaatttatttt 19566974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 107
Target Start/End: Original strand, 29525823 - 29525886
Alignment:
Q  46 aaagttaacatattaacatgataaaca--atcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||||||||||||||||||| |  || ||||| ||||||||||||| ||||||||||||    
T  29525823 aaagttaacatattaacatgataaaaagtattatataatacttcaatcacatttaatttatttt 29525886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 108
Target Start/End: Complemental strand, 9427178 - 9427075
Alignment:
Q  6 tttcatttttaaattacggtcactatgattt-ttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttat 104  Q
    ||||||||||||||||||| |||||| |  | || | ||  ||||||| ||||||| |||||||||||| |||||| |||||||||||| | |||||||     
T  9427178 tttcatttttaaattacggacactataaaatgtttttttttaaagttagcatattagcatgataaacaaacatataatacttcaatcacgcataatttag 9427079  T
Q  105 tttt 108  Q
    ||||    
T  9427078 tttt 9427075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 107
Target Start/End: Complemental strand, 39821819 - 39821760
Alignment:
Q  48 agttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||||||||||||||||||||||  ||| |||| ||||| |||| |||||||||||||||    
T  39821819 agttaacatattaacatgataaatgatcttataatacttaaatcgcacttaatttatttt 39821760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 27926745 - 27926671
Alignment:
Q  6 tttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatata 80  Q
    |||||||||||||||||||  ||||| |  |||   || ||||||||||||||||||||||||||| ||||||||    
T  27926745 tttcatttttaaattacggatactattaaattttggttaaaaagttaacatattaacatgataaacgatcatata 27926671  T

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Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 8426975 - 8427024
Alignment:
Q  58 ttaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||||||||||||  |||||||| |||||||||| |||||||||||||||    
T  8426975 ttaacatgataaatgatcatataatacttcaatcgcacttaatttatttt 8427024  T

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Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 107
Target Start/End: Complemental strand, 20545848 - 20545800
Alignment:
Q  59 taacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||||||| ||| ||||||||| ||||||||||||| ||||||||||||    
T  20545848 taacatgagaaataatcatataatacttcaatcacatttaatttatttt 20545800  T

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Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 107
Target Start/End: Complemental strand, 7681378 - 7681339
Alignment:
Q  68 aaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||| |||||||| ||||||||||||||||||||||||||    
T  7681378 aaacgatcatataatacttcaatcacacttaatttatttt 7681339  T

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Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 93
Target Start/End: Original strand, 36046256 - 36046343
Alignment:
Q  6 tttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcac 93  Q
    ||||||||||||||||||| |||||  |  | | | || ||||||||||||||||||||| ||||  |||| ||| ||||||||||||    
T  36046256 tttcatttttaaattacggacactagaaaatgttttttaaaaagttaacatattaacatgttaaatgatcacataatacttcaatcac 36046343  T

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Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 12751968 - 12751906
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||| |||| ||| ||| || |||||| |||||||| |||||||||||||||||| |||||||    
T  12751968 aaaaattaatataataatataataaacgatcatataatacttcaatcacacttaaattatttt 12751906  T

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Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 28262534 - 28262596
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||| ||| ||||||||||||| ||||| || || ||||||||||  |||||||||||    
T  28262534 aaaagttaatataataacatgataaacgatcatgtaatatttcaatcacatgtaatttatttt 28262596  T

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Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 32503312 - 32503250
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||| |||| || |||||||| ||||||||| || || ||||| ||||||||||||||    
T  32503312 aaaagttaatatataaagatgataaataatcatataatattttaatcatacttaatttatttt 32503250  T

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Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 107
Target Start/End: Complemental strand, 41778898 - 41778864
Alignment:
Q  73 atcatatagtacttcaatcacacttaatttatttt 107  Q
    |||||||| ||||||||||||||||||||||||||    
T  41778898 atcatataatacttcaatcacacttaatttatttt 41778864  T

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Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 107
Target Start/End: Complemental strand, 887051 - 887007
Alignment:
Q  63 atgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||  |||||||| |||||||||||||| |||||||||||    
T  887051 atgataaatgatcatataatacttcaatcacacataatttatttt 887007  T

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Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 887254 - 887210
Alignment:
Q  60 aacatgataaacaatcatatagtacttcaatcacacttaatttat 104  Q
    |||||||||||| |||||||| |||||||||||||| | ||||||    
T  887254 aacatgataaacgatcatataatacttcaatcacacatgatttat 887210  T

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Target: scaffold0262 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 49 - 107
Target Start/End: Original strand, 16391 - 16449
Alignment:
Q  49 gttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  16391 gttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttatttt 16449  T

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Target: scaffold0067 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 39234 - 39343
Alignment:
Q  1 ttacatttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagta---cttcaatcacactt 97  Q
    |||| ||||||||||||||||||| ||||||||  | | | || ||||||||||||||||||||||||||  |||||||| ||   ||||||||||||||    
T  39234 ttacttttcatttttaaattacggacactatgaaatgttttttaaaaagttaacatattaacatgataaatgatcatataatacttcttcaatcacactt 39333  T
Q  98 aatttatttt 107  Q
    ||||||||||    
T  39334 aatttatttt 39343  T

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Target: scaffold0294 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 15450 - 15354
Alignment:
Q  10 atttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||||||||||| |||||||| | || | || ||| || ||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||    
T  15450 atttttaaattacggacactatgaatgtttt-ttaaaaggtcaacatattaacgtgataaacaatcatataatacttcaaccacacttaatttatttt 15354  T

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Target: scaffold0171 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 107
Target Start/End: Complemental strand, 16142 - 16041
Alignment:
Q  6 tttcatttttaaattacggtcactatgatttttgtcttcaaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatt 105  Q
    |||||||||||||||||||  | |||||  | | | || ||||||||||||||||| |||| ||||||| ||| | |||||||||||||| |||||| ||    
T  16142 tttcatttttaaattacggatattatgaaatgttttttaaaaagttaacatattaatatgaaaaacaattataaaatacttcaatcacacataatttttt 16043  T
Q  106 tt 107  Q
    ||    
T  16042 tt 16041  T

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Target: scaffold0096 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 6736 - 6675
Alignment:
Q  45 aaaagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    |||| |||| |||||||||| |||||| |||||||| ||||||||||||||| ||||||||||    
T  6736 aaaaattaaaatattaacat-ataaacgatcatataatacttcaatcacactaaatttatttt 6675  T

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Target: scaffold0006 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 81516 - 81565
Alignment:
Q  59 taacatgataaacaatcatatagtacttcaatcacacttaatttattttt 108  Q
    ||||||||||||  |||||||| ||||||||||| |||| ||||||||||    
T  81516 taacatgataaatgatcatataatacttcaatcatacttgatttattttt 81565  T

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Target: scaffold0341 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 18920 - 18861
Alignment:
Q  47 aagttaacatattaacatgataaacaatcatatagtacttcaatcacacttaatttatttt 107  Q
    ||||||| ||||||||||||||||  |||||||| || |||||| |||| |||||||||||    
T  18920 aagttaatatattaacatgataaa-gatcatataataattcaatgacacataatttatttt 18861  T

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