View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5706_low_62 (Length: 237)
Name: NF5706_low_62
Description: NF5706
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5706_low_62 |
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Alignment Details
Target: chr1 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 37561947 - 37562168
Alignment:
| Q |
1 |
agcaaaggatggattggctaacaaggcaaagactagagcgccgtagtgtttgattaacatattgatggtaggtggatcaataattagatattcatatgtt |
100 |
Q |
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| T |
37561947 |
agcaagggatggattggctaacaaggcaaagactagagcgccgtagtgtttgattaacatattgatggtaggtggatcaataattagatattcgtatgtt |
37562046 |
T |
|
| Q |
101 |
tcattcattgatttatagacaaacacatcaccctccaccaccccttcctctataaaactactagtattagtatattagggattagcttcattacaaagga |
200 |
Q |
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| T |
37562047 |
tcattgattgatttatagacaaacacatcaccctccacccccccttcctctataaaactactagtattagtatattagggattagcttcattacaaagga |
37562146 |
T |
|
| Q |
201 |
atttatattagtgcgtagaaac |
222 |
Q |
| |
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|||||||||||||||||||||| |
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| T |
37562147 |
atttatattagtgcgtagaaac |
37562168 |
T |
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