View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5709_low_1 (Length: 727)

Name: NF5709_low_1
Description: NF5709
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5709_low_1
NF5709_low_1
[»] chr1 (12 HSPs)
chr1 (13-363)||(45792691-45793040)
chr1 (206-380)||(26793702-26793876)
chr1 (599-721)||(6768554-6768677)
chr1 (202-374)||(19806758-19806932)
chr1 (206-380)||(9383223-9383397)
chr1 (259-461)||(6768260-6768466)
chr1 (206-382)||(4076340-4076516)
chr1 (316-380)||(42471969-42472033)
chr1 (268-363)||(50004909-50005004)
chr1 (206-374)||(49236112-49236280)
chr1 (206-255)||(30951329-30951378)
chr1 (230-363)||(4950160-4950292)
[»] chr8 (10 HSPs)
chr8 (202-518)||(31734257-31734573)
chr8 (197-380)||(22573071-22573254)
chr8 (599-715)||(31734658-31734774)
chr8 (199-363)||(40028760-40028924)
chr8 (205-363)||(7547801-7547959)
chr8 (261-375)||(9028635-9028749)
chr8 (251-363)||(32889941-32890053)
chr8 (245-378)||(39283691-39283824)
chr8 (284-363)||(11066506-11066585)
chr8 (250-375)||(556768-556895)
[»] chr5 (4 HSPs)
chr5 (201-363)||(13109649-13109811)
chr5 (201-363)||(13039655-13039817)
chr5 (204-322)||(13417058-13417175)
chr5 (207-380)||(34731215-34731388)
[»] chr7 (8 HSPs)
chr7 (205-359)||(10026381-10026535)
chr7 (219-363)||(23318951-23319095)
chr7 (198-377)||(41482419-41482598)
chr7 (250-380)||(24429679-24429809)
chr7 (261-373)||(39594635-39594747)
chr7 (204-380)||(2333983-2334161)
chr7 (266-363)||(39644909-39645006)
chr7 (261-319)||(44107776-44107834)
[»] chr4 (16 HSPs)
chr4 (604-715)||(2183594-2183706)
chr4 (250-377)||(26635260-26635387)
chr4 (599-715)||(45413422-45413539)
chr4 (199-322)||(22202864-22202987)
chr4 (245-380)||(45413766-45413901)
chr4 (212-322)||(26183605-26183715)
chr4 (204-368)||(19181421-19181585)
chr4 (265-380)||(33235790-33235905)
chr4 (225-375)||(55945653-55945803)
chr4 (266-379)||(36625533-36625646)
chr4 (266-377)||(2183300-2183411)
chr4 (265-374)||(33451327-33451436)
chr4 (219-375)||(35320583-35320739)
chr4 (270-375)||(44126013-44126118)
chr4 (206-362)||(42964462-42964616)
chr4 (203-361)||(24155110-24155268)
[»] chr2 (10 HSPs)
chr2 (269-363)||(7670385-7670479)
chr2 (209-362)||(16567724-16567877)
chr2 (226-380)||(40626434-40626588)
chr2 (203-322)||(24447922-24448041)
chr2 (599-715)||(6457878-6457996)
chr2 (206-379)||(6452409-6452581)
chr2 (285-380)||(1529674-1529769)
chr2 (267-380)||(40054459-40054572)
chr2 (263-363)||(5256379-5256479)
chr2 (266-363)||(18665165-18665262)
[»] chr3 (8 HSPs)
chr3 (245-388)||(40416932-40417075)
chr3 (217-353)||(48936324-48936458)
chr3 (204-380)||(32490846-32491022)
chr3 (261-379)||(7038604-7038722)
chr3 (326-380)||(45850751-45850805)
chr3 (266-375)||(51976193-51976302)
chr3 (306-368)||(38457782-38457844)
chr3 (310-375)||(20524901-20524966)
[»] chr6 (3 HSPs)
chr6 (259-375)||(8547436-8547552)
chr6 (269-368)||(8573796-8573895)
chr6 (340-380)||(16342710-16342750)


Alignment Details
Target: chr1 (Bit Score: 299; Significance: 1e-168; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 13 - 363
Target Start/End: Complemental strand, 45793040 - 45792691
Alignment:
Q  13 tcatcaagctaattacaagaagatgaataaaacaaaggagttgaaaaacacaagaaaagggtttatttgtgttgacatttttacacttattttcttaann 112  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  45793040 tcatcaagctaattataagaagatgaaaaaaacaaaggagttgaaaaacacaagaaaagggtttatttgtgttgacatttttacacttattttcttaatt 45792941  T
Q  113 nnnnnnaattaaaatgaaagaattttcaatcaaattatttcactttaactaaaaagacattggagaaacaatgaagttaaactgtaagagcccgtttggt 212  Q
          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  45792940 ttttttaattaaaatgaaagaattttcaatcaaattatttcactttaactaaaaagacattggagaaacaatgaagttaaacggtaagagcccgtttggt 45792841  T
Q  213 gtgcaggataaggagacaagatatgattagaatatcctatcctgactcaatccgttgtttggtgcaccaacaggaaatgataagtttaacatgtttctaa 312  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  45792840 gtgcaggataaggagacatgatatgattagaatatcctatcctgactcaatccgtt-tttggtgcaccaacagaaaatgataagtttaacatgtttctaa 45792742  T
Q  313 tcctatcctattgagcctttgtaattcttatccttagtttttggtgggtta 363  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45792741 tcctatcctattgagcctttgtaattcttatccttagtttttggtgggtta 45792691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 206 - 380
Target Start/End: Original strand, 26793702 - 26793876
Alignment:
Q  206 gtttggtgtgcaggataaggagacaagatatgattagaa-tatcctatcctgactcaatccgttgtttggtgcaccaacaggaaatgataagtttaacat 304  Q
    ||||||||  || |||||| ||||| |||||||| |||| |||| |||||||| |||||||||||||||||||||||| || ||| ||||| || ||| |    
T  26793702 gtttggtgcacatgataagaagacatgatatgat-agaactatcatatcctgattcaatccgttgtttggtgcaccaatagaaaaggataacttaaactt 26793800  T
Q  305 gtttctaatcctatcctattgagcctttgtaattcttatccttagtttttggtgggttaacaacctgatagcataa 380  Q
     ||||||||||||||||| | | ||||||| ||| |||| ||||||||||||||||||| ||||||||||||||||    
T  26793801 atttctaatcctatcctaatcaacctttgttatttttattcttagtttttggtgggttagcaacctgatagcataa 26793876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 599 - 721
Target Start/End: Original strand, 6768554 - 6768677
Alignment:
Q  599 gaacccaatttcatattcttggacgatctttccattttctggtacaattgcaacacaaaattttcaccatt-tttgtgaatctttaaatactgattcatc 697  Q
    |||| |||||||||||||||||||||||||| |||||||||||| | |||||| |||||||||||||| || |||||||||| || || |||||||||||    
T  6768554 gaactcaatttcatattcttggacgatctttgcattttctggtaaatttgcaaaacaaaattttcacctttatttgtgaatcgttgaacactgattcatc 6768653  T
Q  698 taaacccaatttgatattcttcga 721  Q
    ||||||||| |||||||| |||||    
T  6768654 taaacccaaattgatattattcga 6768677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 202 - 374
Target Start/End: Complemental strand, 19806932 - 19806758
Alignment:
Q  202 gcccgtttggtgtgcaggataaggagacaagatatgattagaatatcctatcctgactcaatccgttgtttggt--gcaccaacaggaaatgataagttt 299  Q
    ||||||||||||  || |||||||||| | |||||||| | | ||||||||||| | |||||| | ||||||||  ||| ||| |||||| ||||| ||     
T  19806932 gcccgtttggtgcacatgataaggagataggatatgataacactatcctatccttattcaatctggtgtttggtttgcatcaataggaaaggataaatta 19806833  T
Q  300 aacatgtttctaatcctatcctattgagcctttgtaattcttatccttagtttttggtgggttaacaacctgata 374  Q
    ||| | ||||||||||||||||||| |  ||||||  |||| |||||||||||||||||||||||||||||||||    
T  19806832 aacctatttctaatcctatcctattcactctttgtttttctaatccttagtttttggtgggttaacaacctgata 19806758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 206 - 380
Target Start/End: Complemental strand, 9383397 - 9383223
Alignment:
Q  206 gtttggtgtgcaggataaggagacaagatatgattagaatatcctatcctgactcaatccgttgtttggtgcaccaacaggaaatgataagtttaacatg 305  Q
    |||||||||  |||||| ||||| |||||||||| | | ||||  ||||||| | ||||| |||||||||||||||| |||||  ||||| || |||       
T  9383397 gtttggtgtataggatagggagaaaagatatgataaaactatcacatcctgattaaatccattgtttggtgcaccaataggaacggataaattaaaccaa 9383298  T
Q  306 tttctaatcctatcctattgagcctttgtaattcttatccttagtttttggtgggttaacaacctgatagcataa 380  Q
    ||||||||| ||||||| | | ||||||| ||| | ||||||| |||||| ||||||| ||||||||||||||||    
T  9383297 tttctaatcttatcctactcaccctttgttattttcatccttaatttttgatgggttagcaacctgatagcataa 9383223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 259 - 461
Target Start/End: Original strand, 6768260 - 6768466
Alignment:
Q  259 tcaatccgttgtttggtgcaccaacaggaaatgataagtttaacatgtttctaatcctatcctattgagcctttgtaattcttatccttagtttttggtg 358  Q
    |||||| ||||||||||| ||||| || ||||||||| || ||| | ||||  ||||||| ||||  | ||||||| ||| ||||||||| |||||||||    
T  6768260 tcaatctgttgtttggtgtaccaatagaaaatgataaattaaacttatttcctatcctattctatccaacctttgttatttttatccttaatttttggtg 6768359  T
Q  359 ggttaacaacctgatagcataatattat--cacatgcgcatcnnnnnnncttcaaa-accctctttcgactcccaccctctccaatga-tctatttcaaa 454  Q
    |||||  ||||||||||||||| |  ||  |||| |||||||       ||||||| ||||||||||||||||| ||||||||||| | ||||| |||||    
T  6768360 ggttaggaacctgatagcataacaacatcacacacgcgcatcttttattcttcaaagaccctctttcgactccctccctctccaataattctatgtcaaa 6768459  T
Q  455 attgatt 461  Q
    || ||||    
T  6768460 atcgatt 6768466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 206 - 382
Target Start/End: Complemental strand, 4076516 - 4076340
Alignment:
Q  206 gtttggtgtgcaggataaggagacaagatatgattagaatatcctatcctgactcaatccgttgtttggtgcaccaacaggaaatgataagtttaacatg 305  Q
    ||||||||  || |||||||||| | |||||||| | | |||| || ||| | | |||| | ||||||||||| ||| |||||| ||||| || ||| |     
T  4076516 gtttggtgcacatgataaggagataggatatgataacactatcatacccttatttaatctggtgtttggtgcatcaataggaaaggataaattaaaccta 4076417  T
Q  306 tttctaatcctatcctattgagcctttgtaattcttatccttagtttttggtgggttaacaacctgatagcataata 382  Q
    || |||||||||||||||| |  ||||||  |||| |||||||||||||||||| |||  |||||||||| ||||||    
T  4076416 ttactaatcctatcctattcactctttgtttttctaatccttagtttttggtggattaggaacctgataggataata 4076340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 316 - 380
Target Start/End: Complemental strand, 42472033 - 42471969
Alignment:
Q  316 tatcctattgagcctttgtaattcttatccttagtttttggtgggttaacaacctgatagcataa 380  Q
    ||||||||||   |||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  42472033 tatcctattgcttctttgtaattttaatccttagtttttggtgggttaacaacctgatagcataa 42471969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 268 - 363
Target Start/End: Complemental strand, 50005004 - 50004909
Alignment:
Q  268 tgtttggtgcaccaacaggaaatgataagtttaacatgtttctaatcctatcctattgagcctttgtaattcttatccttagtttttggtgggtta 363  Q
    ||||||||||||||| |  ||| ||||| || ||| | ||||||||||||||||| | | ||||||| ||| ||||||||||||||||||||||||    
T  50005004 tgtttggtgcaccaataaaaaaggataatttaaacctatttctaatcctatcctaatcaccctttgttatttttatccttagtttttggtgggtta 50004909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 206 - 374
Target Start/End: Original strand, 49236112 - 49236280
Alignment:
Q  206 gtttggtgtgcaggataaggagacaagatatgattagaatatcctatcctgactcaatccgttgtttggtgcaccaacaggaaatgataagtttaacatg 305  Q
    |||||||| |||||||||  ||||| ||||||||   | |||| ||||||||   ||||  |||||||||||||||| || ||| ||||| || |||||     
T  49236112 gtttggtgcgcaggataactagacaggatatgatacaattatcatatcctgatgaaatctattgtttggtgcaccaatagaaaaggataaattaaacata 49236211  T
Q  306 tttctaatcctatcctattgagcctttgtaattcttatccttagtttttggtgggttaacaacctgata 374  Q
    ||||   ||||||||||   | ||||| | |||| ||||||| ||||||||||||||| ||||||||||    
T  49236212 tttcatttcctatcctacccaacctttcttattcatatccttggtttttggtgggttagcaacctgata 49236280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 255
Target Start/End: Original strand, 30951329 - 30951378
Alignment:
Q  206 gtttggtgtgcaggataaggagacaagatatgattagaatatcctatcct 255  Q
    |||||||| ||||||||  |||||||||||||||||| ||||||||||||    
T  30951329 gtttggtgcgcaggatagagagacaagatatgattagcatatcctatcct 30951378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 230 - 363
Target Start/End: Original strand, 4950160 - 4950292
Alignment:
Q  230 aagatatgattagaatatcctatcctgactcaatccgttgtttggtgcaccaacaggaaatgataagtttaacatgtttctaatcctatcctattgagcc 329  Q
    |||||||||| |  |||||||||| ||  |||||  | ||||||||||| ||| || ||||||||| || |||   |||  |||| ||||||||| | ||    
T  4950160 aagatatgataaacatatcctatcttgtttcaatttgatgtttggtgcatcaatagaaaatgataatttaaactcattttcaatcatatcctatttaccc 4950259  T
Q  330 tttgtaattcttatccttagtttttggtgggtta 363  Q
    ||||| ||| |||||| |||||||||||||||||    
T  4950260 tttgttatttttatcc-tagtttttggtgggtta 4950292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 164; Significance: 3e-87; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 202 - 518
Target Start/End: Original strand, 31734257 - 31734573
Alignment:
Q  202 gcccgtttggtgtgcaggataaggagacaagatatgattagaatatcctatcctgactcaatccgttgtttggtgcaccaacaggaaatgataagtttaa 301  Q
    ||||||||||||  || ||||  |||||| ||||||||  || | ||||||||||  | |||||||||||||||||||||| | |||||||||| || ||    
T  31734257 gcccgtttggtgcacatgatagagagacatgatatgataggactttcctatcctgctttaatccgttgtttggtgcaccaataagaaatgataaattaaa 31734356  T
Q  302 catgtttctaatcctatcctattgagcctttgtaattcttatccttagtttttggtgggttaacaacctgatagcataatattatcacatgcgcatcnnn 401  Q
    | | |||| |||| ||||| ||  | ||||||| ||| |||||||||||||||||||| |||||||| ||||| ||||||||| |||||||||||||       
T  31734357 cctatttccaatcttatcccatccaccctttgttatttttatccttagtttttggtggattaacaacatgataacataatattgtcacatgcgcatcttt 31734456  T
Q  402 nnnncttcaaaaccctctttcgactcccaccctctccaatgatctatttcaaaattgattgcaattgttttttcttctctacaactgttcatcttcctcc 501  Q
        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  31734457 tattcttcaaaaccctctttcgactcccaccctctccaatgatctatttcaaaattgattgtaattgttttttcttctctgcaactgttcatcttcctcc 31734556  T
Q  502 actccaccgccagcctc 518  Q
    |||||||||||||||||    
T  31734557 actccaccgccagcctc 31734573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 197 - 380
Target Start/End: Original strand, 22573071 - 22573254
Alignment:
Q  197 taagagcccgtttggtgtgcaggataaggagacaagatatgattagaatatcctatcctgactcaatccgttgtttggtgcaccaacaggaaatgataag 296  Q
    ||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22573071 taagagcccgtttggtgcgcatgataaggagacatgatatgattagaatatcctatcctgactcaatccgttgtttggtgcaccaacaggaaatgataag 22573170  T
Q  297 tttaacatgtttctaatcctatcctattgagcctttgtaattcttatccttagtttttggtgggttaacaacctgatagcataa 380  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  22573171 tttaacctgtttctaatcctatcctattgaacctttgtaattcttatccttagtttttggtgggttaacaacatgataggataa 22573254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 599 - 715
Target Start/End: Original strand, 31734658 - 31734774
Alignment:
Q  599 gaacccaatttcatattcttggacgatctttccattttctggtacaattgcaacacaaaattttcaccatttttgtgaatctttaaatactgattcatct 698  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||    
T  31734658 gaacccaatttcatattcttggacgatttttccattttttggtacaattgcaaaacaaaattttcaccatttttgtgaatctttggatactgattcatct 31734757  T
Q  699 aaacccaatttgatatt 715  Q
    |||||||||||||||||    
T  31734758 aaacccaatttgatatt 31734774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 199 - 363
Target Start/End: Original strand, 40028760 - 40028924
Alignment:
Q  199 agagcccgtttggtgtgcaggataaggagacaagatatgattagaatatcctatcctgactcaatccgttgtttggtgcaccaacaggaaatgataagtt 298  Q
    ||||||||||||||| |||||||||||||||| |||||||||| |||||| ||||||| ||||||| |||||||||||| ||||||||||||||||| ||    
T  40028760 agagcccgtttggtgcgcaggataaggagacaggatatgattaaaatatcatatcctgcctcaatctgttgtttggtgcgccaacaggaaatgataactt 40028859  T
Q  299 taacatgtttctaatcctatcctattgagcctttgtaattcttatccttagtttttggtgggtta 363  Q
    |||| | |||||||||  |||||| |   ||||||| ||| ||||||||||  ||| ||||||||    
T  40028860 taacctttttctaatctcatcctactcctcctttgttatttttatccttaggattttgtgggtta 40028924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 205 - 363
Target Start/End: Original strand, 7547801 - 7547959
Alignment:
Q  205 cgtttggtgtgcaggataaggagacaagatatgattagaatatcctatcctgactcaatccgttgtttggtgcaccaacaggaaatgataagtttaacat 304  Q
    ||||||||| | || |||||||||||||||||||||| | |||| |||| || || |||||||||||||||||||||||| ||||||||||||||||| |    
T  7547801 cgtttggtgcgaagaataaggagacaagatatgattacattatcatatcttgtcttaatccgttgtttggtgcaccaacaagaaatgataagtttaacct 7547900  T
Q  305 gtttctaatcctatcctattgagcctttgtaattcttatccttagtttttggtgggtta 363  Q
     ||| | ||||||||| | |   ||||||  ||| ||||||||||||||||||||||||    
T  7547901 attttttatcctatcccacttctcctttgatattattatccttagtttttggtgggtta 7547959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 261 - 375
Target Start/End: Complemental strand, 9028749 - 9028635
Alignment:
Q  261 aatccgttgtttggtgcaccaacaggaaatgataagtttaacatgtttctaatcctatcctattgagcctttgtaattcttatccttagtttttggtggg 360  Q
    |||| |||||||||||||||||||  ||| ||||| || ||| | ||| ||||||||||||||||| |||||||||||||||||||| ||||||| ||||    
T  9028749 aatcggttgtttggtgcaccaacataaaaggataatttaaacctatttttaatcctatcctattgaacctttgtaattcttatccttggtttttgatggg 9028650  T
Q  361 ttaacaacctgatag 375  Q
    ||| |||||||||||    
T  9028649 ttagcaacctgatag 9028635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 251 - 363
Target Start/End: Original strand, 32889941 - 32890053
Alignment:
Q  251 atcctgactcaatccgttgtttggtgcaccaacaggaaatgataagtttaacatgtttctaatcctatcctattgagcctttgtaattcttatccttagt 350  Q
    ||||||| ||||||||||||||| ||| |||| | ||||||||||||||||| | ||||||||||||||| | |   |||||||  || ||||||||||     
T  32889941 atcctgagtcaatccgttgtttgatgccccaatatgaaatgataagtttaacctatttctaatcctatcccacttctcctttgttgtttttatccttaga 32890040  T
Q  351 ttttggtgggtta 363  Q
    |||||||||||||    
T  32890041 ttttggtgggtta 32890053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 245 - 378
Target Start/End: Original strand, 39283691 - 39283824
Alignment:
Q  245 tatcctatcctgactcaatccgttgtttggtgcaccaacaggaaatgataagtttaac-atgtttctaatcctatcctattgagcctttgtaattcttat 343  Q
    |||| |||||||| ||||||| ||||||| ||||||||||  ||| ||||| || ||| || |||| ||||||||| |||| | ||||| |  || ||||    
T  39283691 tatcatatcctgagtcaatccattgtttgatgcaccaacataaaaggataaattaaaccatttttc-aatcctatcatattcaccctttattttttttat 39283789  T
Q  344 ccttagtttttggtgggttaacaacctgatagcat 378  Q
    | ||| |||||||||||||| ||||||||||||||    
T  39283790 ctttaatttttggtgggttagcaacctgatagcat 39283824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 284 - 363
Target Start/End: Original strand, 11066506 - 11066585
Alignment:
Q  284 aggaaatgataagtttaacatgtttctaatcctatcctattgagcctttgtaattcttatccttagtttttggtgggtta 363  Q
    |||||| ||||| || ||| | ||||||||||||||||| | ||||||||| ||| ||||||||| |||||||| |||||    
T  11066506 aggaaaggataacttaaacctatttctaatcctatcctactcagcctttgttatttttatccttaatttttggtaggtta 11066585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 250 - 375
Target Start/End: Original strand, 556768 - 556895
Alignment:
Q  250 tatcctgactcaatccgttgtttggtgcaccaacaggaaatgataagtttaacatgtttctaatcctatcctattgagcctttgtaattcttatccttag 349  Q
    ||||||||  ||| ||| ||||| ||||| ||| || ||||||||| || ||| | ||||||||| ||||||||| | |||||||  |||| |||||| |    
T  556768 tatcctgatccaaaccgctgtttcgtgcaacaatagaaaatgataaattaaacctatttctaatcatatcctattcaccctttgtttttctaatcctttg 556867  T
Q  350 tttt--tggtgggttaacaacctgatag 375  Q
    ||||  |||||||||| |||| ||||||    
T  556868 tttttttggtgggttagcaacatgatag 556895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 1e-43; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 201 - 363
Target Start/End: Original strand, 13109649 - 13109811
Alignment:
Q  201 agcccgtttggtgtgcaggataaggagacaagatatgattagaatatcctatcctgactcaatccgttgtttggtgcaccaacaggaaatgataagttta 300  Q
    ||||||||||||| ||||||||| ||||||| |||||||||| ||||||||||||| || ||||| ||||||||||| || | || ||||||||||||||    
T  13109649 agcccgtttggtgcgcaggataaagagacaaaatatgattagtatatcctatcctgtcttaatccattgtttggtgcgcccatagaaaatgataagttta 13109748  T
Q  301 acatgtttctaatcctatcctattgagcctttgtaattcttatccttagtttttggtgggtta 363  Q
    |||| ||||||||| ||||||||  | ||||||| ||| ||||||||||||||||||||||||    
T  13109749 acatatttctaatcatatcctatccaccctttgttatttttatccttagtttttggtgggtta 13109811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 201 - 363
Target Start/End: Original strand, 13039655 - 13039817
Alignment:
Q  201 agcccgtttggtgtgcaggataaggagacaagatatgattagaatatcctatcctgactcaatccgttgtttggtgcaccaacaggaaatgataagttta 300  Q
    ||||||||||||| ||||||||| ||||||| |||||||||| ||||||||||||| || ||||| ||||||||||| || | |||||||||||||||||    
T  13039655 agcccgtttggtgcgcaggataaagagacaaaatatgattagtatatcctatcctgtcttaatccattgtttggtgcgcccataggaaatgataagttta 13039754  T
Q  301 acatgtttctaatcctatcctattgagcctttgtaattcttatccttagtttttggtgggtta 363  Q
    |||| ||||||||  ||||||||  | ||||| | ||| ||||||||||||||||||||||||    
T  13039755 acatatttctaattatatcctatccatcctttattatttttatccttagtttttggtgggtta 13039817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 204 - 322
Target Start/End: Complemental strand, 13417175 - 13417058
Alignment:
Q  204 ccgtttggtgtgcaggataaggagacaagatatgattagaatatcctatcctgactcaatccgttgtttggtgcaccaacaggaaatgataagtttaaca 303  Q
    |||||||||| ||| |||||||| ||| |||||||||| | |||  |||||||||||||||||  ||||||||||||||||| ||| ||||||||||||     
T  13417175 ccgtttggtgcgcatgataaggatacatgatatgattaaattattatatcctgactcaatccgc-gtttggtgcaccaacagaaaaagataagtttaacc 13417077  T
Q  304 tgtttctaatcctatccta 322  Q
    | |||||||||||| ||||    
T  13417076 tatttctaatcctaaccta 13417058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 207 - 380
Target Start/End: Original strand, 34731215 - 34731388
Alignment:
Q  207 tttggtgtgcaggataaggagacaagatatgattagaatatcctatcctgactcaatccgttgtttggtgcaccaacaggaaatgataagtttaacatgt 306  Q
    ||||||| ||| ||||| |||| | |||||||| | | |||| ||||||   | ||||| |||||||||||||||| |||||| |||||  | ||| | |    
T  34731215 tttggtgcgcatgataaagagataggatatgataacactatcatatcctatttaaatcccttgtttggtgcaccaataggaaaggataaactaaacctat 34731314  T
Q  307 ttctaatcctatcctattgagcctttgtaattcttatccttagtttttggtgggttaacaacctgatagcataa 380  Q
    |  ||||||||||||||  | ||||||| ||| | |||||||||||| | ||||||| ||||||||||| ||||    
T  34731315 tgttaatcctatcctatcaatcctttgttattttaatccttagttttagctgggttagcaacctgataggataa 34731388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 6e-39; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 205 - 359
Target Start/End: Original strand, 10026381 - 10026535
Alignment:
Q  205 cgtttggtgtgcaggataaggagacaagatatgattagaatatcctatcctgactcaatccgttgtttggtgcaccaacaggaaatgataagtttaacat 304  Q
    ||||||||| |||||||||||||||| |||||||||||| |||| |||| || || ||||| |||||||||||||||||| ||||||||||||||||| |    
T  10026381 cgtttggtgcgcaggataaggagacaggatatgattagattatcatatcttgtcttaatcccttgtttggtgcaccaacatgaaatgataagtttaacct 10026480  T
Q  305 gtttctaatcctatcctattgagcctttgtaattcttatccttagtttttggtgg 359  Q
     ||||||||| ||||| | |   ||||||| ||||||||||||||||||||||||    
T  10026481 atttctaatcatatcccactcctcctttgttattcttatccttagtttttggtgg 10026535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 219 - 363
Target Start/End: Complemental strand, 23319095 - 23318951
Alignment:
Q  219 gataaggagacaagatatgattagaatatcctatcctgactcaatccgttgtttggtgcaccaacaggaaatgataagtttaacatgtttctaatcctat 318  Q
    |||||| ||||| |||||||| | | |||| |||||||| | |||| |||||||||| |||||||| |||| ||||| || ||| | ||| |||||||||    
T  23319095 gataagaagacaggatatgataacactatcatatcctgattaaatctgttgtttggtccaccaacatgaaaggataatttaaacctatttttaatcctat 23318996  T
Q  319 cctattgagcctttgtaattcttatccttagtttttggtgggtta 363  Q
    |||||||||||||||||||| |||||||| ||||||| |||||||    
T  23318995 cctattgagcctttgtaatttttatccttggtttttgatgggtta 23318951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 198 - 377
Target Start/End: Complemental strand, 41482598 - 41482419
Alignment:
Q  198 aagagcccgtttggtgtgcaggataaggagacaagatatgattagaatatcctatcctgactcaatccgttgtttggtgcaccaacaggaaatgataagt 297  Q
    ||||||||||||||||  || |||| | ||||| |||| ||| | | |||| | |||||| | ||| || |||||||||||||||||||||| ||||| |    
T  41482598 aagagcccgtttggtgcacatgataggaagacatgataggataaaactatcatctcctgatttaatgcgctgtttggtgcaccaacaggaaaggataact 41482499  T
Q  298 ttaacatgtttctaatcctatcctattgagcctttgtaattcttatccttagtttttggtgggttaacaacctgatagca 377  Q
    | ||| | ||| ||||| ||||||| | | ||||||| ||| |||||||||||||||||||||||| |||||||||||||    
T  41482498 taaacctatttttaatcatatcctactcaccctttgttatttttatccttagtttttggtgggttagcaacctgatagca 41482419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 250 - 380
Target Start/End: Original strand, 24429679 - 24429809
Alignment:
Q  250 tatcctgactcaatccgttgtttggtgcaccaacaggaaatgataagtttaacatgtttctaatcctatcctattgagcctttgtaattcttatccttag 349  Q
    |||||||| ||| || | || ||| |||||||| || ||||||||| || ||  | ||| |||||||||| || | | ||||||| ||| ||||||||||    
T  24429679 tatcctgattcattctgctgcttgatgcaccaatagaaaatgataatttaaaactatttataatcctatcttactcaccctttgttatttttatccttag 24429778  T
Q  350 tttttggtgggttaacaacctgatagcataa 380  Q
    |||||||||||||| ||||||||||||||||    
T  24429779 tttttggtgggttagcaacctgatagcataa 24429809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 261 - 373
Target Start/End: Original strand, 39594635 - 39594747
Alignment:
Q  261 aatccgttgtttggtgcaccaacaggaaatgataagtttaacatgtttctaatcctatcctattgagcctttgtaattcttatccttagtttttggtggg 360  Q
    |||||||||||||||||||||| | || ||| ||| || ||| | || |||||| |||| |||| | ||||||||||| |||||||||||||||| ||||    
T  39594635 aatccgttgtttggtgcaccaataagatatgctaaattaaacctattactaatcttatcatattcatcctttgtaatttttatccttagtttttgatggg 39594734  T
Q  361 ttaacaacctgat 373  Q
    ||| |||| ||||    
T  39594735 ttagcaacatgat 39594747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 204 - 380
Target Start/End: Complemental strand, 2334161 - 2333983
Alignment:
Q  204 ccgtttggtgtgcaggataaggagacaagatatgattagaatatcctatcctgact---caatccgttgtttggtgcaccaacaggaaatgataagttta 300  Q
    ||||||| || ||| |||||||||||| |||||||| | | |||| |||||||| |   ||||||| ||||||||||||||| ||||   ||||| || |    
T  2334161 ccgtttgatgcgcatgataaggagacatgatatgataacactatcatatcctgaatattcaatccggtgtttggtgcaccaataggattggataacttaa 2334062  T
Q  301 acatgtttctaatcctatcctattgagcctttgtaattcttatccttagtttttggtgggttaacaacctgatagcataa 380  Q
    || | ||| ||||||||||||||| | | ||||| ||| |||||  | ||||||||| ||||| ||||| ||||||||||    
T  2334061 acctatttttaatcctatcctattcaccttttgttatttttatctctggtttttggttggttagcaacc-gatagcataa 2333983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 266 - 363
Target Start/End: Original strand, 39644909 - 39645006
Alignment:
Q  266 gttgtttggtgcaccaacaggaaatgataagtttaacatgtttctaatcctatcctattgagcctttgtaattcttatccttagtttttggtgggtta 363  Q
    |||||||||||| |||| || ||| ||||| || |||   ||| ||||||||||||| | | ||||||| ||| ||||||||||||||||||||||||    
T  39644909 gttgtttggtgcgccaatagaaaaggataacttaaacccatttataatcctatcctactcatcctttgttatttttatccttagtttttggtgggtta 39645006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 261 - 319
Target Start/End: Original strand, 44107776 - 44107834
Alignment:
Q  261 aatccgttgtttggtgcaccaacaggaaatgataagtttaacatgtttctaatcctatc 319  Q
    ||||| |||||||||||||||| |||||||||||| || ||| | || |||||||||||    
T  44107776 aatcctttgtttggtgcaccaataggaaatgataaattaaaccttttcctaatcctatc 44107834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 2e-35; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 604 - 715
Target Start/End: Original strand, 2183594 - 2183706
Alignment:
Q  604 caatttcatattcttggacgatctttccattttctggtacaattgcaacacaaaattttcaccatt-tttgtgaatctttaaatactgattcatctaaac 702  Q
    ||||||||||||||||||  |||||| ||||||||||||||||||||| |||||||||||||| || |||||||||| || |||||||||||||||||||    
T  2183594 caatttcatattcttggattatctttgcattttctggtacaattgcaaaacaaaattttcacctttatttgtgaatcgttgaatactgattcatctaaac 2183693  T
Q  703 ccaatttgatatt 715  Q
    |||||||||||||    
T  2183694 ccaatttgatatt 2183706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 250 - 377
Target Start/End: Complemental strand, 26635387 - 26635260
Alignment:
Q  250 tatcctgactcaatccgttgtttggtgcaccaacaggaaatgataagtttaacatgtttctaatcctatcctattgagcctttgtaattcttatccttag 349  Q
    ||||||||||||||||||| ||||||||||||||| || ||||||| |||||| | |||| ||| |||||||| |   ||||| | ||||||||||||||    
T  26635387 tatcctgactcaatccgttttttggtgcaccaacatgatatgataaatttaacctatttccaattctatcctactcctcctttattattcttatccttag 26635288  T
Q  350 tttttggtgggttaacaacctgatagca 377  Q
    |||||||||||||| |||||||||||||    
T  26635287 tttttggtgggttagcaacctgatagca 26635260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 599 - 715
Target Start/End: Complemental strand, 45413539 - 45413422
Alignment:
Q  599 gaacccaatttcatattcttggacgatctttccattttctggtacaattgcaacacaaaattttcaccatt-tttgtgaatctttaaatactgattcatc 697  Q
    |||| |||||||||||||||||| ||||||| |||||||||||| |||||||| |||||||||||||| || |||||||||| || || ||||||||||     
T  45413539 gaactcaatttcatattcttggatgatctttgcattttctggtaaaattgcaaaacaaaattttcacctttatttgtgaatcgttgaacactgattcatt 45413440  T
Q  698 taaacccaatttgatatt 715  Q
    |||| |||||||||||||    
T  45413439 taaatccaatttgatatt 45413422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 199 - 322
Target Start/End: Original strand, 22202864 - 22202987
Alignment:
Q  199 agagcccgtttggtgtgcaggataaggagacaagatatgattagaatatcctatcctgactcaatccgttgtttggtgcaccaacaggaaatgataagtt 298  Q
    ||||||||||||||| |||||||||||||||| |||||||| ||||||||||||| || | |||||||||||||| |||  | | | |||||||||||||    
T  22202864 agagcccgtttggtgcgcaggataaggagacaggatatgatcagaatatcctatcgtgtcccaatccgttgtttgttgcgaccatatgaaatgataagtt 22202963  T
Q  299 taacatgtttctaatcctatccta 322  Q
    |||| | ||| |||||||||||||    
T  22202964 taacctatttttaatcctatccta 22202987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 245 - 380
Target Start/End: Complemental strand, 45413901 - 45413766
Alignment:
Q  245 tatcctatcctgactcaatccgttgtttggtgcaccaacaggaaatgataagtttaacatgtttctaatcctatcctattgagcctttgtaattcttatc 344  Q
    |||| |||| ||| |||||| ||||||||||||||||| |||||| ||||| || ||| | ||||  ||||||||||||  | ||||||| ||| |||||    
T  45413901 tatcatatcttgattcaatcggttgtttggtgcaccaataggaaaggataaattaaacctatttcctatcctatcctatctaacctttgttatttttatc 45413802  T
Q  345 cttagtttttggtgggttaacaacctgatagcataa 380  Q
    ||||||||||||||||||| ||||||||||||||||    
T  45413801 cttagtttttggtgggttagcaacctgatagcataa 45413766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 212 - 322
Target Start/End: Original strand, 26183605 - 26183715
Alignment:
Q  212 tgtgcaggataaggagacaagatatgattagaatatcctatcctgactcaatccgttgtttggtgcaccaacaggaaatgataagtttaacatgtttcta 311  Q
    |||||| ||||||||||||| ||| ||||| |||| | |||    ||||||| | ||||||| |||||||||||||||||||||||||||||| ||||||    
T  26183605 tgtgcatgataaggagacaacatacgattaaaataacatatttaaactcaattccttgtttgatgcaccaacaggaaatgataagtttaacatatttcta 26183704  T
Q  312 atcctatccta 322  Q
    |||||||||||    
T  26183705 atcctatccta 26183715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 204 - 368
Target Start/End: Complemental strand, 19181585 - 19181421
Alignment:
Q  204 ccgtttggtgtgcaggataaggagacaagatatgattagaatatcctatcctgactcaatccgttgtttggtgcaccaacaggaaatgataagtttaaca 303  Q
    ||||||||||  || ||||  |||||| |||||||| | | |||||||||||||  |||||  |||||||||||||||||| || ||||||| || |||     
T  19181585 ccgtttggtgcacatgatagagagacatgatatgataaaattatcctatcctgatccaatctattgtttggtgcaccaacatgatatgataaattaaacc 19181486  T
Q  304 tgtttctaatcctatcctattgagcctttgtaattcttatccttagtttttggtgggttaacaac 368  Q
    | ||||||||||||||||| | | ||||| | ||| || ||||||||||||||||| ||| ||||    
T  19181485 tatttctaatcctatcctactcatcctttattatttttgtccttagtttttggtggattagcaac 19181421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 265 - 380
Target Start/End: Complemental strand, 33235905 - 33235790
Alignment:
Q  265 cgttgtttggtgcaccaacaggaaatgataagtttaacatgtttctaatcctatcctattgagcctttgtaattcttatccttagtttttggtgggttaa 364  Q
    ||||| |||||||||||| || |||| ||||||||||| ||||  ||||||||||||||||| ||||||||||| ||||||||| |||||| || ||||     
T  33235905 cgttgcttggtgcaccaatagaaaataataagtttaacctgttcttaatcctatcctattgaacctttgtaattattatccttaatttttgatgagttag 33235806  T
Q  365 caacctgatagcataa 380  Q
    |||  |||||| ||||    
T  33235805 caatatgataggataa 33235790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 225 - 375
Target Start/End: Complemental strand, 55945803 - 55945653
Alignment:
Q  225 gagacaagatatgattagaatatcctatcctgactcaatccgttgtttggtgcaccaacaggaaatgataagtttaacatgtttctaatcctatcctatt 324  Q
    |||||| |||||||||| ||||||||| |||  ||||||||||||||||||||||||| |||||| ||||| |  ||  | |||||||||||||||||||    
T  55945803 gagacatgatatgattaaaatatcctacccttcctcaatccgttgtttggtgcaccaataggaaaggataaatccaatctatttctaatcctatcctatt 55945704  T
Q  325 gagcctttgtaattcttatccttagtttttggtgggttaacaacctgatag 375  Q
       | ||| | ||| | ||| |||  |||||||||||||||||| ||||||    
T  55945703 ctccatttcttattttaatctttaacttttggtgggttaacaacatgatag 55945653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 266 - 379
Target Start/End: Complemental strand, 36625646 - 36625533
Alignment:
Q  266 gttgtttggtgcaccaacaggaaatgataagtttaacatgtttctaatcctatcctattgagcctttgtaattcttatccttagtttttggtgggttaac 365  Q
    |||||||||||||| || |||| ||||||| || ||| | || | |||||||||||||| | ||||||||||||| ||||||| |||||| ||||||| |    
T  36625646 gttgtttggtgcactaataggatatgataaattaaacctattacgaatcctatcctattcaccctttgtaattctaatccttactttttgttgggttagc 36625547  T
Q  366 aacctgatagcata 379  Q
    ||| ||||||||||    
T  36625546 aacatgatagcata 36625533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 266 - 377
Target Start/End: Original strand, 2183300 - 2183411
Alignment:
Q  266 gttgtttggtgcaccaacaggaaatgataagtttaacatgtttctaatcctatcctattgagcctttgtaattcttatccttagtttttggtgggttaac 365  Q
    ||||||||||||||||| || ||| ||||| || |||   |||| |||||||||||||  | ||||||| ||| ||||||||| |||||||||||||| |    
T  2183300 gttgtttggtgcaccaatagaaaaggataaattaaactcatttccaatcctatcctatccaacctttgttatttttatccttaatttttggtgggttagc 2183399  T
Q  366 aacctgatagca 377  Q
    ||||||||||||    
T  2183400 aacctgatagca 2183411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 265 - 374
Target Start/End: Original strand, 33451327 - 33451436
Alignment:
Q  265 cgttgtttggtgcaccaacaggaaatgataagtttaacatgtttctaatcctatcctattgagcctttgtaattcttatccttagtttttggtgggttaa 364  Q
    |||||||||||||||||| | || |||||||  | ||| | || ||| | |||||||||| | ||||||||||| | |||||||||||||| ||||||||    
T  33451327 cgttgtttggtgcaccaatatgatatgataaaataaacctattactacttctatcctattcatcctttgtaattataatccttagtttttgatgggttaa 33451426  T
Q  365 caacctgata 374  Q
    |||| |||||    
T  33451427 caacatgata 33451436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 219 - 375
Target Start/End: Original strand, 35320583 - 35320739
Alignment:
Q  219 gataaggagacaagatatgattagaatatcctatcctgactcaatccgttgtttggtgcaccaacaggaaatgataagtttaacatgtttctaatcctat 318  Q
    ||||||||||||| ||||||||| ||||||  ||| || || |||  |||||||| |||| ||||| |||| |||||||||||| | ||| |||||||||    
T  35320583 gataaggagacaatatatgattaaaatatctcatcatggcttaataagttgtttgctgcagcaacatgaaaggataagtttaacctatttttaatcctat 35320682  T
Q  319 cctattgagcctttgtaattcttatccttagtttttggtgggttaacaacctgatag 375  Q
    |  | |    |||||| ||| | |||||||||||||||||| |||  ||||||||||    
T  35320683 ctcactctcactttgttattttaatccttagtttttggtggtttacaaacctgatag 35320739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 270 - 375
Target Start/End: Original strand, 44126013 - 44126118
Alignment:
Q  270 tttggtgcaccaacaggaaatgataagtttaacatgtttctaatcctatcctattgagcctttgtaattcttatccttagtttttggtgggttaacaacc 369  Q
    ||||||||| ||| |||||||||||| || ||| | ||||||||||||||||||| | | |||||  |||| || ||| ||||||| ||||||| ||||     
T  44126013 tttggtgcagcaataggaaatgataaattaaacttatttctaatcctatcctattcaccttttgtttttctaattctttgtttttgatgggttagcaact 44126112  T
Q  370 tgatag 375  Q
    ||||||    
T  44126113 tgatag 44126118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 362
Target Start/End: Complemental strand, 42964616 - 42964462
Alignment:
Q  206 gtttggtgtgcaggataaggagacaagatatgattagaatatcctatcctgactcaatccgttgtttggtgcaccaacaggaaatgataagtttaacatg 305  Q
    |||||||| |||||||||| ||||| |||||||| | | ||||||||||||    |||||| | |||| |||||||| |||||| ||||| || |||       
T  42964616 gtttggtgcgcaggataagcagacaggatatgataaaactatcctatcctgctgaaatccggtatttgttgcaccaataggaaaggataatttaaaccca 42964517  T
Q  306 tttctaatcctatcctattgagcctttgtaattcttatccttagtttttggtgggtt 362  Q
    || || ||||||||||||  |  || ||| ||| | |||||||||||||||||||||    
T  42964516 ttacttatcctatcctatcta--ctctgttattttaatccttagtttttggtgggtt 42964462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 203 - 361
Target Start/End: Original strand, 24155110 - 24155268
Alignment:
Q  203 cccgtttggtgtgcaggataaggagacaagatatgattagaatatcctatcctgactcaatccgttgtttggtgcaccaacaggaaatgataagtttaac 302  Q
    |||||||||||  ||||||||| |||||  ||||||| | | |||| | |||||  ||||||  ||||||| |    ||| |||||||||||| || ||     
T  24155110 cccgtttggtgcacaggataagaagacagaatatgataatactatcatgtcctgtttcaatcttttgtttgatatgtcaataggaaatgataacttaaag 24155209  T
Q  303 atgtttctaatcctatcctattgagcctttgtaattcttatccttagtttttggtgggt 361  Q
     | ||||||||||||||||| | ||| ||||  ||| | ||||||||||||||||||||    
T  24155210 ctatttctaatcctatcctactcagcatttgatattttcatccttagtttttggtgggt 24155268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 4e-34; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 269 - 363
Target Start/End: Original strand, 7670385 - 7670479
Alignment:
Q  269 gtttggtgcaccaacaggaaatgataagtttaacatgtttctaatcctatcctattgagcctttgtaattcttatccttagtttttggtgggtta 363  Q
    |||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  7670385 gtttggtgcaccaatagaaaatgataagtttaacctgtttctaatcctatcctattgagcttttgtaattcttatccttaatttttggtgggtta 7670479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 209 - 362
Target Start/End: Complemental strand, 16567877 - 16567724
Alignment:
Q  209 tggtgtgcaggataaggagacaagatatgattagaatatcctatcctgactcaatccgttgtttggtgcaccaacaggaaatgataagtttaacatgttt 308  Q
    ||||| |||||||||||||||| ||||||||| || |||| |||| || || ||||||||||||||||||||||||| ||| |||||||||||| | |||    
T  16567877 tggtgcgcaggataaggagacatgatatgatttgattatcatatcatgtcttaatccgttgtttggtgcaccaacagaaaaggataagtttaacctattt 16567778  T
Q  309 ctaatcctatcctattgagcctttgtaattcttatccttagtttttggtgggtt 362  Q
    |||||||||||  | |   ||||||| |||||||||| ||||||||||||||||    
T  16567777 ctaatcctatctcactcctcctttgttattcttatccatagtttttggtgggtt 16567724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 226 - 380
Target Start/End: Original strand, 40626434 - 40626588
Alignment:
Q  226 agacaagatatgattagaatatcctatcctgactcaatccgttgtttggtgcaccaacaggaaatgataagtttaacatgtttctaatcctatcctattg 325  Q
    ||||| |||||||| | | |||| |||| ||| |||||| | ||||||||||||||| |||||| ||||| || || || ||||||||||||||||| |     
T  40626434 agacaggatatgataaaactatcatatcttgattcaatctgctgtttggtgcaccaataggaaaggataatttaaatatatttctaatcctatcctactc 40626533  T
Q  326 agcctttgtaattcttatccttagtttttggtgggttaacaacctgatagcataa 380  Q
    | ||||| | ||| |||||||||  ||||||||||||||||||||||||||||||    
T  40626534 accctttattatttttatccttaaattttggtgggttaacaacctgatagcataa 40626588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 203 - 322
Target Start/End: Original strand, 24447922 - 24448041
Alignment:
Q  203 cccgtttggtgtgcaggataaggagacaagatatgattagaatatcctatcctgactcaatccgttgtttggtgcaccaacaggaaatgataagtttaac 302  Q
    ||||||||||| |||||||||||||||| |||||||||| |||||  ||||||| |||||||||||||||||||  || | ||||||||||||||||||     
T  24447922 cccgtttggtgcgcaggataaggagacatgatatgattaaaatattttatcctgtctcaatccgttgtttggtgtgcccataggaaatgataagtttaat 24448021  T
Q  303 atgtttctaatcctatccta 322  Q
     | ||| ||||||| |||||    
T  24448022 ctatttgtaatcctgtccta 24448041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 599 - 715
Target Start/End: Original strand, 6457878 - 6457996
Alignment:
Q  599 gaacccaatttcatattcttggacgatctttccattttctggtacaattgc-aacacaaaattttcaccatt-tttgtgaatctttaaatactgattcat 696  Q
    |||| ||||||||||||||||||  |||||| |||||||| |||||||||| || |||||||||||||| || |||||||||| || ||||||||||  |    
T  6457878 gaactcaatttcatattcttggataatctttgcattttctcgtacaattgcaaaaacaaaattttcacctttatttgtgaatcgttgaatactgatttgt 6457977  T
Q  697 ctaaacccaatttgatatt 715  Q
    |||||||||||||||||||    
T  6457978 ctaaacccaatttgatatt 6457996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 206 - 379
Target Start/End: Original strand, 6452409 - 6452581
Alignment:
Q  206 gtttggtgtgcaggataaggagacaagatatgattagaatatcctatcctgactcaatccgttgtttggtgcaccaacaggaaatgataagtttaacatg 305  Q
    |||||||| ||| |||| ||||||| |||||||| | | ||||||||||    | ||||| | ||||| |||||||| | || ||||||| || ||| |     
T  6452409 gtttggtgcgcatgata-ggagacaggatatgataaaattatcctatccaatttaaatccatggtttgatgcaccaataagatatgataaattaaaccta 6452507  T
Q  306 tttctaatcctatcctattgagcctttgtaattcttatccttagtttttggtgggttaacaacctgatagcata 379  Q
    || |||||| ||||||||| |  |||||||||||| |||||||||||||| |||||||  ||||| ||||||||    
T  6452508 ttactaatcttatcctattcacgctttgtaattctaatccttagtttttgttgggttagaaaccttatagcata 6452581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 285 - 380
Target Start/End: Complemental strand, 1529769 - 1529674
Alignment:
Q  285 ggaaatgataagtttaacatgtttctaatcctatcctattgagcctttgtaattcttatccttagtttttggtgggttaacaacctgatagcataa 380  Q
    |||||||||||||||||| | ||| ||||| ||||||| |   |||||||  |||||||||||  |||||||||||||| ||| ||| ||||||||    
T  1529769 ggaaatgataagtttaacttatttttaatcatatcctactcctcctttgttgttcttatccttgatttttggtgggttagcaatctggtagcataa 1529674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 267 - 380
Target Start/End: Complemental strand, 40054572 - 40054459
Alignment:
Q  267 ttgtttggtgcaccaacaggaaatgataagtttaacatgtttctaatcctatcctattgagcctttgtaattcttatccttagtttttggtgggttaaca 366  Q
    |||||||||||||||| || |||||||||  | ||| | ||  ||||||||||||||  | ||||||| ||| | |||||||||||| | ||||||| ||    
T  40054572 ttgtttggtgcaccaatagaaaatgataaactaaacctattgttaatcctatcctatcaatcctttgttattttaatccttagttttagctgggttagca 40054473  T
Q  367 acctgatagcataa 380  Q
    |||| |||| ||||    
T  40054472 acctaataggataa 40054459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 263 - 363
Target Start/End: Original strand, 5256379 - 5256479
Alignment:
Q  263 tccgttgtttggtgcaccaacaggaaatgataagtttaacatgtttctaatcctatcctattgagcctttgtaattcttatccttagtttttggtgggtt 362  Q
    |||| |||||||||||||   |||||||||||| || ||| ||||  ||||||||||||||||   |||||| ||| |||||||| ||||| | ||||||    
T  5256379 tccgctgtttggtgcaccggtaggaaatgataaattaaacttgttgttaatcctatcctattggctctttgttatttttatcctttgttttagctgggtt 5256478  T
Q  363 a 363  Q
    |    
T  5256479 a 5256479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 266 - 363
Target Start/End: Original strand, 18665165 - 18665262
Alignment:
Q  266 gttgtttggtgcaccaacaggaaatgataagtttaacatgtttctaatcctatcctattgagcctttgtaattcttatccttagtttttggtgggtta 363  Q
    ||||||| ||||||||| |||||| ||||| || ||| | ||||||||  |||| || | | ||||||| | | ||||||||| ||||||||||||||    
T  18665165 gttgtttcgtgcaccaaaaggaaaggataacttaaacctatttctaataatatcttactcaccctttgttaattttatccttaatttttggtgggtta 18665262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 8e-23; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 40416932 - 40417075
Alignment:
Q  245 tatcctatcctgactcaatccgttgtttggtgcaccaacaggaaatgataagtttaacatgtttctaatcctatcctattgagcctttgtaattcttatc 344  Q
    |||| |||||||  |||||||||||||||||||| |||||| ||||||||| || || || ||| |||||||||||||   | ||||| | |||||||||    
T  40416932 tatcatatcctgcttcaatccgttgtttggtgcatcaacagaaaatgataaattaaatatatttttaatcctatcctaccaaccctttattattcttatc 40417031  T
Q  345 cttagtttttggtgggttaacaacctgatagcataatattatca 388  Q
    ||| ||||||| | ||||| ||||||||||||| || |||||||    
T  40417032 cttggtttttgtttggttagcaacctgatagcacaaaattatca 40417075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 217 - 353
Target Start/End: Complemental strand, 48936458 - 48936324
Alignment:
Q  217 aggataaggagacaagatatgattagaatatcctatcctgactcaatccgttgtttggtgcaccaacaggaaatgataagtttaacatgtttctaatcct 316  Q
    |||||| | ||||| |||||||| ||| |||| |||||||  ||||||||||||||||||||||||||||||  ||||| || ||| ||||| |||||||    
T  48936458 aggataggaagacaggatatgataagactatcatatcctgtttcaatccgttgtttggtgcaccaacaggaa--gataatttaaacctgtttttaatcct 48936361  T
Q  317 atcctattgagcctttgtaattcttatccttagtttt 353  Q
    |||||| |   ||||||| ||| ||||||||||||||    
T  48936360 atcctacttctcctttgttatttttatccttagtttt 48936324  T

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Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 204 - 380
Target Start/End: Original strand, 32490846 - 32491022
Alignment:
Q  204 ccgtttggtgtgcaggataaggagacaagatatgattagaatatcctatcctgactcaatccgttgtttggtgcaccaacaggaaatgataagtttaaca 303  Q
    |||||||||| ||||||||| |||||| |||||||| | | |||| ||| ||   | ||||| |||||||||||||||| | |||| |||||    |||     
T  32490846 ccgtttggtgcgcaggataaagagacaggatatgataacactatcatattctatttaaatcctttgtttggtgcaccaatatgaaaggataatcgaaacc 32490945  T
Q  304 tgtttctaatcctatcctattgagcctttgtaattcttatccttagtttttggtgggttaacaacctgatagcataa 380  Q
    | || ||||| |||||||||  | ||||||| ||| | |||||||||||| | ||||||| ||||||||||| ||||    
T  32490946 tattgctaattctatcctatcaatcctttgttattttaatccttagttttagctgggttagcaacctgataggataa 32491022  T

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Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 261 - 379
Target Start/End: Original strand, 7038604 - 7038722
Alignment:
Q  261 aatccgttgtttggtgcaccaacaggaaatgataagtttaacatgtttctaatcctatcctattgagcctttgtaattcttatccttagtttttggtggg 360  Q
    ||||| || |||||| ||| || |||| ||||||| || ||| | || ||||||||||| |||| | | ||||||||||| ||||||| |||||| ||||    
T  7038604 aatccattatttggtacactaataggatatgataaattaaacctattactaatcctatcgtattcatcttttgtaattctaatccttactttttgttggg 7038703  T
Q  361 ttaacaacctgatagcata 379  Q
    ||| |||| ||||||||||    
T  7038704 ttagcaacatgatagcata 7038722  T

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Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 45850805 - 45850751
Alignment:
Q  326 agcctttgtaattcttatccttagtttttggtgggttaacaacctgatagcataa 380  Q
    ||||||||| ||||||||||||  |||||||||||||| ||||||||||||||||    
T  45850805 agcctttgttattcttatccttgatttttggtgggttagcaacctgatagcataa 45850751  T

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Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 266 - 375
Target Start/End: Original strand, 51976193 - 51976302
Alignment:
Q  266 gttgtttggtgcaccaacaggaaatgataagtttaacatgtttctaatcctatcctattgagcctttgtaattcttatccttagtttttggtgggttaac 365  Q
    ||||||||||||||||| || |||||||||| | |   | ||||||||| ||||||||| | | |||||  |||| ||||||   |||||||||||||||    
T  51976193 gttgtttggtgcaccaatagaaaatgataagctaaggctatttctaatcttatcctattcaccatttgtttttctaatccttgaattttggtgggttaac 51976292  T
Q  366 aacctgatag 375  Q
    ||||||||||    
T  51976293 aacctgatag 51976302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 306 - 368
Target Start/End: Original strand, 38457782 - 38457844
Alignment:
Q  306 tttctaatcctatcctattgagcctttgtaattcttatccttagtttttggtgggttaacaac 368  Q
    ||||||||||||||||||| | | ||||| | | ||||||||||| |||||||||||| ||||    
T  38457782 tttctaatcctatcctattcaccttttgttacttttatccttagtatttggtgggttagcaac 38457844  T

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Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 310 - 375
Target Start/End: Original strand, 20524901 - 20524966
Alignment:
Q  310 taatcctatcctattgagcctttgtaattcttatccttagtttttggtgggttaacaacctgatag 375  Q
    ||||| ||||||||  | ||||||||||| | ||||||  ||||||||||||||||||| ||||||    
T  20524901 taatcatatcctatctatcctttgtaattttaatccttgatttttggtgggttaacaacttgatag 20524966  T

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Target: chr6 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 259 - 375
Target Start/End: Complemental strand, 8547552 - 8547436
Alignment:
Q  259 tcaatccgttgtttggtgcaccaacaggaaatgataagtttaacatgtttctaatcctatcctattgagcctttgtaattcttatccttagtttttggtg 358  Q
    ||||||||  |||||| ||| ||| |||||| ||||| || ||| | ||||||||| |||| |||| | ||||||| ||| |||| ||||||||||||||    
T  8547552 tcaatccgccgtttggagcatcaataggaaaggataacttaaacctatttctaatcttatcatattcaccctttgttatttttatacttagtttttggtg 8547453  T
Q  359 ggttaacaacctgatag 375  Q
    ||||| |||| ||||||    
T  8547452 ggttagcaacatgatag 8547436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 269 - 368
Target Start/End: Complemental strand, 8573895 - 8573796
Alignment:
Q  269 gtttggtgcaccaacaggaaatgataagtttaacatgtttctaatcctatcctattgagcctttgtaattcttatccttagtttttggtgggttaacaac 368  Q
    |||||| ||| ||| |||||||||||| || ||| | ||||||||| |||| |||| | ||||||| ||| |||| ||||||||||||||||||| ||||    
T  8573895 gtttggagcatcaataggaaatgataacttaaacctatttctaatcttatcatattcaccctttgttatttttatacttagtttttggtgggttagcaac 8573796  T

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Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 340 - 380
Target Start/End: Complemental strand, 16342750 - 16342710
Alignment:
Q  340 ttatccttagtttttggtgggttaacaacctgatagcataa 380  Q
    ||||||||| |||||||||||||| ||||||||||||||||    
T  16342750 ttatccttaatttttggtgggttagcaacctgatagcataa 16342710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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