View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5710-Insertion-5 (Length: 230)
Name: NF5710-Insertion-5
Description: NF5710
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5710-Insertion-5 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 7 - 230
Target Start/End: Complemental strand, 43142175 - 43141950
Alignment:
| Q |
7 |
accaagatgtaattccaatttcttgtatatcctttaagaataagcatacataaaagagcta--aactgtacgtcaactgaacttatgagttatgatcaca |
104 |
Q |
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| T |
43142175 |
accaagatgtaattccaatttcttgtatatcctttaagaataagcatacataaaagagctataaactgtacgtcaactgaacttatgagttatgatcaca |
43142076 |
T |
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| Q |
105 |
ctactagtgataataaacaatgtgaacatgtaattgactacatcatgtatgcacaatattaatgtgggnnnnnnnngtaaaccaagaaaatacatgcaaa |
204 |
Q |
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| T |
43142075 |
ctactagtgataataaacaatgtgaacatgtaattgattacatcatgtatgcacaatattaatgtgggaaaaaaaagtaaaccaagaaaatacatgcaaa |
43141976 |
T |
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| Q |
205 |
tctaatattttgtagccaaaacatgc |
230 |
Q |
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| T |
43141975 |
tctaatattttgtagccaaaacatgc |
43141950 |
T |
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