View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5710_high_13 (Length: 237)
Name: NF5710_high_13
Description: NF5710
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5710_high_13 |
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Alignment Details
Target: chr5 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 43142391 - 43142170
Alignment:
| Q |
1 |
tatatggtttggttaaccatgcacagcccattgatgaagacatgttatcattagtaccattggttttaataggttaaaacatattccggatgaagatatg |
100 |
Q |
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| T |
43142391 |
tatatggtttggttaaccatgcacagcccattgatgaagacatgttatcattagtaccattggttttaataggttaaaacatattccggatgaagatatg |
43142292 |
T |
|
| Q |
101 |
tgatgatgtacaatattattagaccactctctttttctttcgttttctctttggtgtacactaaacattttccaaaactttacaccgagctttctaattc |
200 |
Q |
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|||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43142291 |
tgatgaggtacaacattattagaccactctctttttctttcgttttctctttggtgtacactaaacattttccaaaactttacaccgagctttctaattc |
43142192 |
T |
|
| Q |
201 |
actacacacagatagtaccaag |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
43142191 |
actacacacagatagtaccaag |
43142170 |
T |
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