View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5710_high_8 (Length: 266)
Name: NF5710_high_8
Description: NF5710
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5710_high_8 |
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Alignment Details
Target: chr1 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 9 - 252
Target Start/End: Complemental strand, 15380073 - 15379830
Alignment:
| Q |
9 |
agcaaaggataagaaataagattaggttattcttacgatcattcatcaaaaacttaaactaaatggcaatagttcagcatatcccatggatcatcccgat |
108 |
Q |
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| T |
15380073 |
agcaaaggataagaaataagattaggttattgttacgatcattcatcaaaaacttaaactaaatggcaatagttcagcatatcacatggatcatcccgat |
15379974 |
T |
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| Q |
109 |
tccatccatcgctgaatcttcttttcaatgagaaatcttactctatttaaagctatcagttgctccactactggtggaagcatagctggtggtcttttgt |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15379973 |
tccatccatcgctgaatcttcttttcaatgagaaatcttactctatttaaagctatcagttgctccactactggtggaagcatagctggtggtcttttgt |
15379874 |
T |
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| Q |
209 |
catgcaacttggatcataaaaagaagggtgctattggaacatat |
252 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15379873 |
catgcaacttggatcataaaaagaagggtgctattggaacatat |
15379830 |
T |
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