View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5713-Insertion-8 (Length: 424)
Name: NF5713-Insertion-8
Description: NF5713
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5713-Insertion-8 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 405; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 405; E-Value: 0
Query Start/End: Original strand, 8 - 424
Target Start/End: Complemental strand, 43551398 - 43550982
Alignment:
| Q |
8 |
cctttatcttcagcagactcattagcttaggaattccatcaagctcaagtattgccttagaatggtcgacacggttataattgtcggtgcacacaaattt |
107 |
Q |
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| T |
43551398 |
cctttatcttcagcagactcattagcttaggaattccatcaagctcaagtattgccttagaatggtcgacacggttataattgtcggtgcacacaaattt |
43551299 |
T |
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| Q |
108 |
tatcaaggcaacaataacttcactagccacatttatatccttgtttccaaggtgtgcaactaaaggaccaagaacatgaggaaccttaccaggaaagttt |
207 |
Q |
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| T |
43551298 |
tatcaaggcaacaataacttcactagccacatttatatccttgtttccaaggtgtgcaactaaaggaccaagaacatgaggaaccttaccaggaaagttt |
43551199 |
T |
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| Q |
208 |
ctggccaatgacccaatggacttaatagcaggaatcagcaatgttgaatcgcgctcttctcgaaccaccttcaaaagctgatccaaaacagcctttgcaa |
307 |
Q |
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| T |
43551198 |
ctggccaatgacccaattgacttaatagcaggaatcagcaatgttgaatcgcgctcttctcgaaccaccttaaaaagctgatccaaaacagcctttgcaa |
43551099 |
T |
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| Q |
308 |
ccggtgctgtaggcttgaaagcacctcttctaagatcagcattggactctgccacagccgtaatttccataacagccatgagacaattgagcctcaattc |
407 |
Q |
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| T |
43551098 |
ccggtgctgtaggcttgaaagcacctcttctaagatcagcattggactctgccacagccgtaatttccataacagccatgagacaattgagcctcaattc |
43550999 |
T |
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| Q |
408 |
tccactctcagactcaa |
424 |
Q |
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| T |
43550998 |
tccactctcagattcaa |
43550982 |
T |
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