View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5714-Insertion-9 (Length: 483)

Name: NF5714-Insertion-9
Description: NF5714
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5714-Insertion-9
NF5714-Insertion-9
[»] chr5 (67 HSPs)
chr5 (6-202)||(35585834-35586030)
chr5 (226-467)||(35585549-35585788)
chr5 (291-445)||(7613706-7613860)
chr5 (291-449)||(25814363-25814521)
chr5 (291-445)||(11099432-11099586)
chr5 (291-445)||(6610836-6610990)
chr5 (288-445)||(39183582-39183739)
chr5 (291-442)||(33988199-33988350)
chr5 (291-445)||(3725185-3725339)
chr5 (291-459)||(8369641-8369805)
chr5 (291-383)||(20189891-20189983)
chr5 (291-454)||(858334-858497)
chr5 (291-442)||(17242912-17243063)
chr5 (291-445)||(42575593-42575747)
chr5 (291-444)||(8692774-8692927)
chr5 (326-444)||(35646045-35646163)
chr5 (289-444)||(15254762-15254917)
chr5 (324-407)||(24231042-24231125)
chr5 (291-454)||(42211332-42211491)
chr5 (365-466)||(4576344-4576445)
chr5 (289-445)||(16283542-16283698)
chr5 (351-454)||(15814701-15814804)
chr5 (291-442)||(35334484-35334635)
chr5 (325-445)||(39008161-39008285)
chr5 (289-451)||(36469043-36469205)
chr5 (288-385)||(17699329-17699426)
chr5 (288-355)||(34534918-34534985)
chr5 (325-407)||(22582865-22582946)
chr5 (300-454)||(25344686-25344838)
chr5 (248-407)||(15898151-15898306)
chr5 (291-439)||(17935222-17935369)
chr5 (288-441)||(4475241-4475393)
chr5 (289-356)||(31956727-31956794)
chr5 (324-443)||(36446644-36446763)
chr5 (289-459)||(5357758-5357928)
chr5 (288-445)||(6172935-6173092)
chr5 (288-356)||(5072946-5073014)
chr5 (249-356)||(14184093-14184197)
chr5 (288-356)||(19889577-19889645)
chr5 (288-356)||(42158690-42158758)
chr5 (226-277)||(9426673-9426724)
chr5 (289-356)||(10044665-10044732)
chr5 (226-277)||(13597966-13598017)
chr5 (288-407)||(25108569-25108688)
chr5 (288-407)||(25167661-25167780)
chr5 (291-378)||(41184116-41184203)
chr5 (345-431)||(4412434-4412520)
chr5 (291-369)||(13135752-13135830)
chr5 (289-339)||(13422413-13422463)
chr5 (288-356)||(17741214-17741285)
chr5 (364-445)||(28057785-28057866)
chr5 (364-445)||(41184732-41184813)
chr5 (249-277)||(4044596-4044624)
chr5 (249-277)||(4194600-4194628)
chr5 (249-277)||(4412343-4412371)
chr5 (292-380)||(6735377-6735465)
chr5 (249-277)||(13016484-13016512)
chr5 (249-277)||(13087862-13087890)
chr5 (249-277)||(20369235-20369263)
chr5 (249-277)||(24534562-24534590)
chr5 (249-277)||(25814324-25814352)
chr5 (249-277)||(31090264-31090292)
chr5 (417-461)||(31956850-31956894)
chr5 (249-277)||(39035975-39036003)
chr5 (288-356)||(42479538-42479606)
chr5 (249-277)||(42575758-42575786)
chr5 (417-445)||(42870939-42870967)
[»] scaffold0034 (1 HSPs)
scaffold0034 (291-459)||(98824-98992)
[»] chr2 (76 HSPs)
chr2 (291-455)||(28301433-28301597)
chr2 (226-444)||(18181168-18181384)
chr2 (291-445)||(43077680-43077834)
chr2 (291-436)||(30757531-30757676)
chr2 (288-404)||(16864930-16865045)
chr2 (293-445)||(435030-435184)
chr2 (291-442)||(37247841-37247992)
chr2 (291-445)||(23684958-23685112)
chr2 (291-445)||(28108329-28108483)
chr2 (291-445)||(28925802-28925956)
chr2 (288-462)||(31545955-31546129)
chr2 (291-445)||(41436078-41436231)
chr2 (322-453)||(2882015-2882147)
chr2 (291-407)||(8031740-8031856)
chr2 (289-445)||(8550596-8550752)
chr2 (291-445)||(13375142-13375298)
chr2 (291-445)||(24775764-24775916)
chr2 (226-454)||(33602171-33602402)
chr2 (230-445)||(5211912-5212124)
chr2 (289-454)||(11726667-11726832)
chr2 (340-455)||(565137-565252)
chr2 (291-454)||(28526963-28527126)
chr2 (326-445)||(36103255-36103374)
chr2 (288-454)||(39095627-39095793)
chr2 (324-454)||(43950393-43950523)
chr2 (291-395)||(7649979-7650083)
chr2 (325-445)||(28572241-28572360)
chr2 (325-436)||(44534446-44534557)
chr2 (325-407)||(3100433-3100515)
chr2 (288-385)||(44424277-44424374)
chr2 (249-395)||(4794530-4794676)
chr2 (288-452)||(6213797-6213961)
chr2 (288-452)||(10069532-10069696)
chr2 (291-407)||(10818620-10818736)
chr2 (326-444)||(15859300-15859415)
chr2 (348-455)||(32556228-32556333)
chr2 (288-385)||(7420891-7420988)
chr2 (288-356)||(7931539-7931607)
chr2 (288-445)||(2048288-2048445)
chr2 (325-445)||(2756707-2756827)
chr2 (288-385)||(19515877-19515974)
chr2 (291-376)||(37028757-37028842)
chr2 (320-405)||(43056403-43056488)
chr2 (300-356)||(29937957-29938013)
chr2 (288-356)||(31592546-31592614)
chr2 (288-356)||(39166739-39166807)
chr2 (291-445)||(3123642-3123799)
chr2 (226-277)||(12872937-12872988)
chr2 (288-355)||(18460484-18460551)
chr2 (289-356)||(28844056-28844123)
chr2 (289-454)||(45464160-45464327)
chr2 (289-427)||(733984-734121)
chr2 (288-378)||(3487390-3487480)
chr2 (249-356)||(6972583-6972691)
chr2 (291-353)||(7213474-7213536)
chr2 (326-396)||(13718812-13718882)
chr2 (320-445)||(36748176-36748301)
chr2 (248-277)||(8385035-8385064)
chr2 (368-445)||(40965090-40965167)
chr2 (417-454)||(44736991-44737028)
chr2 (248-276)||(435204-435232)
chr2 (249-277)||(3100360-3100388)
chr2 (249-277)||(7213435-7213463)
chr2 (249-277)||(9724841-9724869)
chr2 (249-277)||(13375593-13375621)
chr2 (288-356)||(14384321-14384389)
chr2 (249-277)||(15859461-15859489)
chr2 (248-276)||(17154376-17154404)
chr2 (249-277)||(19009805-19009833)
chr2 (288-356)||(26273755-26273823)
chr2 (249-277)||(28572171-28572199)
chr2 (288-336)||(33275761-33275809)
chr2 (249-277)||(41436039-41436067)
chr2 (249-277)||(42881396-42881424)
chr2 (249-277)||(43427482-43427510)
chr2 (249-277)||(44534606-44534634)
[»] chr4 (82 HSPs)
chr4 (249-454)||(38160097-38160301)
chr4 (288-462)||(22872323-22872499)
chr4 (292-455)||(4360352-4360515)
chr4 (291-451)||(37309697-37309857)
chr4 (325-455)||(8295062-8295192)
chr4 (291-449)||(39979779-39979937)
chr4 (291-447)||(18849711-18849867)
chr4 (226-444)||(41436418-41436633)
chr4 (291-445)||(49812228-49812382)
chr4 (288-452)||(52676978-52677142)
chr4 (289-436)||(49448838-49448985)
chr4 (300-467)||(30568667-30568838)
chr4 (323-449)||(54729430-54729560)
chr4 (291-407)||(26799208-26799324)
chr4 (291-447)||(3686010-3686168)
chr4 (291-454)||(41203736-41203899)
chr4 (290-404)||(27977145-27977259)
chr4 (331-445)||(35909527-35909641)
chr4 (291-435)||(38976990-38977135)
chr4 (226-451)||(43334971-43335193)
chr4 (291-445)||(1825200-1825356)
chr4 (305-454)||(28974319-28974468)
chr4 (291-436)||(42185759-42185904)
chr4 (291-455)||(41710088-41710252)
chr4 (291-455)||(42024145-42024309)
chr4 (291-442)||(49306586-49306737)
chr4 (311-402)||(50328068-50328159)
chr4 (288-454)||(17237039-17237205)
chr4 (291-376)||(48740519-48740604)
chr4 (291-454)||(39258215-39258380)
chr4 (291-379)||(44020782-44020870)
chr4 (291-375)||(51527418-51527501)
chr4 (249-356)||(55360391-55360497)
chr4 (328-407)||(18509877-18509956)
chr4 (289-356)||(47277725-47277792)
chr4 (291-445)||(47787801-47787955)
chr4 (325-407)||(9093754-9093836)
chr4 (291-412)||(42544208-42544329)
chr4 (291-383)||(14009650-14009742)
chr4 (310-454)||(50714600-50714744)
chr4 (322-453)||(34021067-34021198)
chr4 (291-369)||(29644354-29644432)
chr4 (249-449)||(38319871-38320069)
chr4 (226-381)||(51572246-51572397)
chr4 (227-276)||(3503175-3503224)
chr4 (321-442)||(26185211-26185332)
chr4 (289-353)||(11583917-11583981)
chr4 (328-403)||(8065569-8065644)
chr4 (325-455)||(33047525-33047655)
chr4 (305-396)||(39976393-39976484)
chr4 (325-407)||(283469-283551)
chr4 (288-441)||(10309213-10309366)
chr4 (335-409)||(40881182-40881256)
chr4 (292-445)||(16493252-16493403)
chr4 (417-462)||(27790358-27790403)
chr4 (288-445)||(29550681-29550838)
chr4 (291-356)||(35998160-35998225)
chr4 (288-356)||(3505718-3505786)
chr4 (249-356)||(36047143-36047248)
chr4 (249-356)||(49218825-49218930)
chr4 (331-406)||(31862828-31862903)
chr4 (289-356)||(40293684-40293751)
chr4 (289-356)||(47846896-47846963)
chr4 (291-445)||(4357567-4357720)
chr4 (289-347)||(32323661-32323719)
chr4 (248-277)||(388539-388568)
chr4 (248-277)||(18873071-18873100)
chr4 (248-277)||(20964413-20964442)
chr4 (291-356)||(39052944-39053009)
chr4 (248-277)||(39979739-39979768)
chr4 (249-277)||(5291649-5291677)
chr4 (249-277)||(8294991-8295019)
chr4 (288-356)||(22020553-22020621)
chr4 (288-356)||(25149447-25149515)
chr4 (249-277)||(28330752-28330780)
chr4 (248-276)||(32323623-32323651)
chr4 (300-356)||(32949892-32949948)
chr4 (249-277)||(33047458-33047486)
chr4 (249-277)||(37316041-37316069)
chr4 (418-462)||(40020882-40020926)
chr4 (249-277)||(47386119-47386147)
chr4 (249-277)||(48400749-48400777)
[»] chr1 (79 HSPs)
chr1 (291-454)||(7785217-7785383)
chr1 (291-445)||(50267393-50267547)
chr1 (291-445)||(32587764-32587918)
chr1 (291-403)||(48242587-48242699)
chr1 (291-445)||(42926133-42926287)
chr1 (291-445)||(49494118-49494272)
chr1 (291-407)||(19532912-19533028)
chr1 (326-452)||(5040523-5040649)
chr1 (291-407)||(26755975-26756091)
chr1 (291-455)||(28839338-28839502)
chr1 (325-445)||(36467150-36467270)
chr1 (291-455)||(51749128-51749292)
chr1 (248-404)||(17342787-17342940)
chr1 (291-434)||(28277001-28277147)
chr1 (291-445)||(5442339-5442493)
chr1 (300-452)||(34813925-34814077)
chr1 (295-445)||(43895850-43895999)
chr1 (292-454)||(46536340-46536502)
chr1 (291-442)||(45889205-45889357)
chr1 (325-444)||(52432345-52432464)
chr1 (292-462)||(3718788-3718957)
chr1 (325-455)||(32348251-32348381)
chr1 (288-434)||(40019755-40019901)
chr1 (291-445)||(52830369-52830522)
chr1 (338-454)||(49944978-49945094)
chr1 (291-407)||(17724707-17724823)
chr1 (291-442)||(8327716-8327867)
chr1 (349-445)||(28908144-28908242)
chr1 (288-378)||(52382408-52382498)
chr1 (331-455)||(8773281-8773406)
chr1 (341-447)||(10370137-10370244)
chr1 (326-407)||(46496052-46496133)
chr1 (293-413)||(21304385-21304505)
chr1 (288-455)||(11425814-11425981)
chr1 (326-385)||(36784348-36784407)
chr1 (291-454)||(46880415-46880577)
chr1 (291-436)||(3555519-3555664)
chr1 (300-454)||(48391755-48391911)
chr1 (333-445)||(6787288-6787400)
chr1 (340-412)||(7787710-7787782)
chr1 (289-385)||(45305850-45305946)
chr1 (226-451)||(13500676-13500896)
chr1 (326-445)||(21304762-21304880)
chr1 (289-408)||(25842596-25842714)
chr1 (305-435)||(27391360-27391490)
chr1 (291-340)||(27698811-27698860)
chr1 (288-447)||(27831841-27831999)
chr1 (326-407)||(30749965-30750046)
chr1 (326-407)||(30771416-30771497)
chr1 (248-356)||(31798377-31798482)
chr1 (290-403)||(34877087-34877200)
chr1 (288-348)||(16451627-16451687)
chr1 (288-348)||(16460780-16460840)
chr1 (372-443)||(1608064-1608137)
chr1 (289-407)||(40061806-40061924)
chr1 (325-436)||(51848656-51848769)
chr1 (292-444)||(2571363-2571514)
chr1 (248-277)||(15290449-15290478)
chr1 (320-385)||(25869711-25869776)
chr1 (248-277)||(37541237-37541266)
chr1 (292-356)||(705393-705457)
chr1 (249-277)||(2219567-2219595)
chr1 (249-277)||(2886131-2886159)
chr1 (249-277)||(6784963-6784991)
chr1 (300-356)||(10707971-10708027)
chr1 (249-277)||(14358126-14358154)
chr1 (249-277)||(26583688-26583716)
chr1 (249-277)||(26760117-26760145)
chr1 (249-277)||(26924389-26924417)
chr1 (249-277)||(27698772-27698800)
chr1 (288-356)||(29225749-29225817)
chr1 (249-277)||(29756264-29756292)
chr1 (249-277)||(36467315-36467343)
chr1 (249-277)||(36784274-36784302)
chr1 (288-356)||(37925290-37925358)
chr1 (249-277)||(43895807-43895835)
chr1 (249-277)||(46536300-46536328)
chr1 (249-277)||(48242710-48242738)
chr1 (249-277)||(52830533-52830561)
[»] chr7 (60 HSPs)
chr7 (291-435)||(30463015-30463159)
chr7 (292-454)||(27234503-27234664)
chr7 (291-435)||(34963772-34963919)
chr7 (291-435)||(36117660-36117805)
chr7 (291-433)||(2842018-2842160)
chr7 (291-445)||(37490572-37490726)
chr7 (326-445)||(5724662-5724780)
chr7 (331-445)||(23058858-23058971)
chr7 (291-445)||(47454003-47454157)
chr7 (325-445)||(7425831-7425952)
chr7 (291-407)||(23703915-23704031)
chr7 (291-459)||(44604418-44604585)
chr7 (325-455)||(11616594-11616724)
chr7 (249-403)||(31581439-31581590)
chr7 (291-445)||(29434535-29434688)
chr7 (291-445)||(49100457-49100610)
chr7 (325-445)||(33773997-33774117)
chr7 (291-455)||(29257546-29257710)
chr7 (305-467)||(46095353-46095514)
chr7 (310-384)||(21387495-21387569)
chr7 (291-436)||(2846639-2846784)
chr7 (288-445)||(2849251-2849408)
chr7 (288-444)||(34064211-34064367)
chr7 (325-444)||(38181829-38181948)
chr7 (292-384)||(28333171-28333263)
chr7 (291-407)||(33584562-33584678)
chr7 (294-402)||(34001856-34001964)
chr7 (288-444)||(36070101-36070257)
chr7 (288-356)||(37496440-37496508)
chr7 (291-383)||(40590841-40590933)
chr7 (300-407)||(17266035-17266142)
chr7 (288-383)||(27337889-27337984)
chr7 (291-384)||(18235189-18235282)
chr7 (288-452)||(32775979-32776144)
chr7 (288-434)||(5068266-5068409)
chr7 (288-356)||(10355778-10355846)
chr7 (288-441)||(14648876-14649030)
chr7 (310-405)||(19687977-19688072)
chr7 (249-462)||(37264273-37264482)
chr7 (349-445)||(22617989-22618081)
chr7 (333-459)||(40038049-40038174)
chr7 (288-385)||(1099100-1099197)
chr7 (326-383)||(7456600-7456657)
chr7 (325-445)||(48981689-48981809)
chr7 (300-356)||(3667920-3667976)
chr7 (288-356)||(6591584-6591652)
chr7 (311-435)||(40803591-40803714)
chr7 (365-444)||(5083427-5083506)
chr7 (322-356)||(21412079-21412113)
chr7 (230-276)||(37157112-37157158)
chr7 (291-377)||(46288453-46288539)
chr7 (289-354)||(27242775-27242840)
chr7 (227-276)||(28923347-28923396)
chr7 (249-277)||(7425998-7426026)
chr7 (249-277)||(11616521-11616549)
chr7 (245-277)||(29997148-29997180)
chr7 (288-356)||(30462656-30462724)
chr7 (249-277)||(39343790-39343818)
chr7 (249-277)||(40023845-40023873)
chr7 (249-277)||(48981339-48981367)
[»] chr6 (23 HSPs)
chr6 (291-447)||(31265778-31265934)
chr6 (295-459)||(7739458-7739622)
chr6 (322-454)||(14312593-14312725)
chr6 (291-449)||(7301032-7301188)
chr6 (291-445)||(15081422-15081576)
chr6 (245-403)||(31723450-31723605)
chr6 (291-445)||(3604554-3604708)
chr6 (324-445)||(4238453-4238572)
chr6 (291-445)||(33109372-33109526)
chr6 (322-454)||(14306186-14306318)
chr6 (291-445)||(9755101-9755255)
chr6 (326-454)||(34915756-34915886)
chr6 (291-447)||(30063901-30064057)
chr6 (290-432)||(26356267-26356409)
chr6 (300-406)||(117087-117193)
chr6 (288-455)||(33921413-33921580)
chr6 (249-277)||(2310407-2310435)
chr6 (249-277)||(4552862-4552890)
chr6 (288-356)||(8232354-8232421)
chr6 (249-277)||(9755265-9755293)
chr6 (249-277)||(15081383-15081411)
chr6 (288-356)||(33017987-33018055)
chr6 (288-356)||(34803750-34803818)
[»] chr8 (70 HSPs)
chr8 (291-445)||(12653686-12653840)
chr8 (288-462)||(42412320-42412494)
chr8 (291-445)||(44790376-44790530)
chr8 (292-445)||(31410562-31410715)
chr8 (291-435)||(28802766-28802910)
chr8 (291-445)||(38252391-38252546)
chr8 (291-455)||(5392048-5392212)
chr8 (291-407)||(39171542-39171658)
chr8 (291-407)||(45425484-45425600)
chr8 (291-445)||(32967231-32967385)
chr8 (291-445)||(29615797-29615951)
chr8 (324-445)||(22324909-22325030)
chr8 (248-444)||(32241379-32241572)
chr8 (291-447)||(5962425-5962581)
chr8 (288-452)||(27868272-27868436)
chr8 (325-444)||(33190864-33190983)
chr8 (291-445)||(2349349-2349504)
chr8 (249-407)||(45197571-45197727)
chr8 (300-454)||(139030-139184)
chr8 (245-454)||(3384488-3384698)
chr8 (291-407)||(34133126-34133242)
chr8 (288-444)||(2195464-2195620)
chr8 (290-447)||(26677067-26677229)
chr8 (325-453)||(29730840-29730972)
chr8 (288-452)||(7258314-7258478)
chr8 (288-356)||(33826227-33826295)
chr8 (295-407)||(42558573-42558685)
chr8 (291-403)||(44615361-44615473)
chr8 (288-383)||(8418318-8418413)
chr8 (249-356)||(2796999-2797104)
chr8 (349-454)||(4480415-4480519)
chr8 (334-407)||(9014745-9014818)
chr8 (288-445)||(29638297-29638454)
chr8 (249-356)||(886491-886595)
chr8 (293-377)||(18725910-18725994)
chr8 (288-379)||(1230383-1230473)
chr8 (305-445)||(138654-138793)
chr8 (288-462)||(3442479-3442652)
chr8 (302-396)||(21587287-21587381)
chr8 (288-378)||(32679031-32679121)
chr8 (291-356)||(4274342-4274407)
chr8 (326-443)||(15559086-15559203)
chr8 (288-396)||(8618124-8618232)
chr8 (288-356)||(10728965-10729033)
chr8 (288-356)||(14117458-14117526)
chr8 (332-445)||(7042792-7042907)
chr8 (289-356)||(27987655-27987722)
chr8 (289-356)||(28044957-28045024)
chr8 (288-441)||(5423122-5423276)
chr8 (292-378)||(11637140-11637226)
chr8 (322-356)||(23764996-23765030)
chr8 (289-462)||(27875079-27875252)
chr8 (291-445)||(33746173-33746327)
chr8 (290-356)||(41759673-41759739)
chr8 (243-276)||(17790217-17790250)
chr8 (322-355)||(27571582-27571615)
chr8 (288-356)||(2875129-2875197)
chr8 (249-277)||(5392008-5392036)
chr8 (249-277)||(13085070-13085098)
chr8 (249-277)||(14689920-14689948)
chr8 (288-356)||(14748749-14748817)
chr8 (293-353)||(18733386-18733446)
chr8 (249-277)||(26570278-26570306)
chr8 (249-277)||(32231839-32231867)
chr8 (249-277)||(33191028-33191056)
chr8 (231-275)||(33826177-33826221)
chr8 (288-436)||(40077713-40077861)
chr8 (249-277)||(41726481-41726509)
chr8 (248-276)||(42797807-42797835)
chr8 (249-277)||(45421059-45421087)
[»] chr3 (57 HSPs)
chr3 (291-445)||(39866507-39866661)
chr3 (291-445)||(54122178-54122332)
chr3 (325-445)||(9017834-9017954)
chr3 (325-444)||(43639471-43639590)
chr3 (305-445)||(48744272-48744413)
chr3 (226-454)||(2868511-2868736)
chr3 (291-445)||(32827258-32827412)
chr3 (291-445)||(33994656-33994810)
chr3 (291-442)||(26134660-26134811)
chr3 (291-454)||(53876381-53876544)
chr3 (249-405)||(41031532-41031688)
chr3 (325-435)||(54782996-54783106)
chr3 (300-445)||(11251081-11251226)
chr3 (291-447)||(32023052-32023209)
chr3 (305-454)||(36097600-36097749)
chr3 (324-454)||(10855026-10855156)
chr3 (291-383)||(45392089-45392181)
chr3 (291-453)||(54845462-54845624)
chr3 (292-454)||(17776939-17777101)
chr3 (292-454)||(19078240-19078402)
chr3 (291-436)||(5245411-5245556)
chr3 (372-469)||(49408589-49408686)
chr3 (292-404)||(26832071-26832183)
chr3 (288-424)||(41287258-41287394)
chr3 (288-448)||(52325173-52325333)
chr3 (291-407)||(54493907-54494023)
chr3 (324-454)||(14756059-14756189)
chr3 (291-454)||(46785924-46786089)
chr3 (291-405)||(54458303-54458417)
chr3 (321-386)||(22202402-22202467)
chr3 (288-362)||(37041910-37041984)
chr3 (292-385)||(11529125-11529218)
chr3 (300-404)||(46627920-46628024)
chr3 (288-356)||(53754107-53754175)
chr3 (325-444)||(21296458-21296577)
chr3 (289-356)||(27668370-27668437)
chr3 (288-444)||(48409580-48409738)
chr3 (288-354)||(34081100-34081166)
chr3 (300-432)||(1772073-1772206)
chr3 (288-385)||(3862186-3862283)
chr3 (399-455)||(11529020-11529076)
chr3 (323-407)||(55415431-55415515)
chr3 (289-356)||(47496166-47496233)
chr3 (415-453)||(4980731-4980769)
chr3 (366-451)||(39364985-39365071)
chr3 (288-445)||(44218988-44219144)
chr3 (288-385)||(39329764-39329861)
chr3 (322-383)||(47165210-47165271)
chr3 (229-277)||(8706088-8706136)
chr3 (229-277)||(9057975-9058023)
chr3 (249-277)||(21296622-21296650)
chr3 (289-356)||(30261544-30261612)
chr3 (249-277)||(36790992-36791020)
chr3 (249-277)||(43640684-43640712)
chr3 (249-277)||(46194325-46194353)
chr3 (249-277)||(51164912-51164940)
chr3 (288-356)||(53051022-53051090)
[»] scaffold0058 (1 HSPs)
scaffold0058 (291-449)||(14455-14613)
[»] scaffold0221 (1 HSPs)
scaffold0221 (291-382)||(8886-8977)
[»] scaffold0045 (1 HSPs)
scaffold0045 (291-369)||(26321-26399)
[»] scaffold0155 (1 HSPs)
scaffold0155 (248-356)||(7997-8102)
[»] scaffold0685 (1 HSPs)
scaffold0685 (288-378)||(6421-6511)
[»] scaffold0321 (2 HSPs)
scaffold0321 (291-467)||(9485-9657)
scaffold0321 (249-277)||(9668-9696)
[»] scaffold0006 (1 HSPs)
scaffold0006 (325-444)||(229856-229974)
[»] scaffold0007 (1 HSPs)
scaffold0007 (291-445)||(230255-230408)
[»] scaffold0003 (1 HSPs)
scaffold0003 (288-383)||(352477-352572)
[»] scaffold0086 (1 HSPs)
scaffold0086 (291-356)||(5817-5882)
[»] scaffold0020 (1 HSPs)
scaffold0020 (288-407)||(171222-171341)
[»] scaffold0028 (1 HSPs)
scaffold0028 (291-381)||(26612-26702)


Alignment Details
Target: chr5 (Bit Score: 173; Significance: 8e-93; HSPs: 67)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 173; E-Value: 8e-93
Query Start/End: Original strand, 6 - 202
Target Start/End: Complemental strand, 35586030 - 35585834
Alignment:
Q  6 cagatcgatcttttgacaatgatggctctgtcgtggctcccacggttgttgaccttcagggagtcaaagatttgttgaagcaaagatctccacctgagtc 105  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  35586030 cagatcgatcttttgacaaggatggctctgtcgtggctcccacagttgttgaccttcagggagtcaaagatttgttgaagcaaggatctccacctgagtc 35585931  T
Q  106 ctgacttacccttttcgtcatctatcttcaagatgacactatgcaagaaagtgaatgagaggcctcatgagtgggaagacgagcttgcttacatata 202  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  35585930 ctgacttacccttttcgtcatatatcttcaagatgacactatgcaagaaagtgaatgagaggcctcatgagtgtgaagacgagcttgcttatatata 35585834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 226 - 467
Target Start/End: Complemental strand, 35585788 - 35585549
Alignment:
Q  226 tattgtcctaaaattacttacatatttcacttttcaatacaatattaattacnnnnnnnnnncaattataactttaatcaatattactttaattattctc 325  Q
    |||||||||||||||||| | || ||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| || | ||||    
T  35585788 tattgtcctaaaattactgatatgtttcacttttcaatacaatattaattactttttttt--caattataactttaatcaatattactttcatcactctc 35585691  T
Q  326 aattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttatacatt 425  Q
    ||||||||||||||||||||   |||||||| ||||||||||||||||||||||||||||||| ||||||  |||||||| |||| |||| |||||||||    
T  35585690 aattcaatatatttcactttgtctttatgatagtggataatgcatcaatacttaacaagaatatttaaaatcatttttctttttcccccatttatacatt 35585591  T
Q  426 tttcttaatatatgtgaaataagcaaatggttcacttcatcc 467  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  35585590 tttcttaatatgtgtgaaataagcaaatggttcacttcatcc 35585549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 291 - 445
Target Start/End: Original strand, 7613706 - 7613860
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| ||||||||||| || |||  |||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||   |||    
T  7613706 ttataactataattaatattacttttatcatttccaattcaatatatttcactttacatttatgatagtggagaatgcaccaatacttaacaagtgcact 7613805  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    |||||| |||||||||||||    | |||||||||||||||||||| ||| ||||    
T  7613806 taaaactatttttctctttccttaatttatacatttttcttaatatgtgttaaat 7613860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 291 - 449
Target Start/End: Original strand, 25814363 - 25814521
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    ||||||||||||| ||||||||| | || |||  |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||   |||    
T  25814363 ttataactttaattaatattactctcatcatttccaattcaatatatttcactttacatttatgatagtggataatgtaccaatacttaacaagtgcact 25814462  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagc 449  Q
    |||||| |||||||||| ||   || |||| ||||||||||||||  ||||||||||||    
T  25814463 taaaactatttttctctctccttcatttatgcatttttcttaatacgtgtgaaataagc 25814521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 291 - 445
Target Start/End: Complemental strand, 11099586 - 11099432
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| |||| |||||| || | || |||||||||||||| ||||||  ||||||||| ||||| |||||| ||||||||||||| || |||    
T  11099586 ttataactctaattaatactactttcatcactcccaattcaatatattccactttgtatttatgatagtggagaatgcaccaatacttaacaaaaacact 11099487  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    |||||| |||||||||| |||  || |||||||||||||||||||| ||||||||    
T  11099486 taaaactatttttctctctctttcatttatacatttttcttaatatgtgtgaaat 11099432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 291 - 445
Target Start/End: Original strand, 6610836 - 6610990
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    ||||||||||||| ||||||||||| || | ||  ||||||||||||||||||||||||||||||| ||||| |||||| |||||||||| || || |||    
T  6610836 ttataactttaattaatattactttcatcactccgaattcaatatatttcactttacatttatgatagtggagaatgcaccaatacttaataaaaacact 6610935  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    ||||   |||||||||| ||   || | |||||||||||||||| ||||||||||    
T  6610936 taaactcatttttctctctccttcattgatacatttttcttaatctatgtgaaat 6610990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 288 - 445
Target Start/End: Complemental strand, 39183739 - 39183582
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaat 387  Q
    ||||||||||| |||| ||||||||||| || | ||||||||||||||||| |||||| |||||||||| ||||| ||| |||||||||||||| | |      
T  39183739 caattataactctaattaatattactttcatcactctcaattcaatatattccactttgcatttatgatagtggagaattcatcaatacttaacgaaagc 39183640  T
Q  388 acttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    ||||||||  |||||| ||| | |  || |||||||||||||||||||| ||||||||    
T  39183639 acttaaaatcatttttatctctttttcatttatacatttttcttaatatgtgtgaaat 39183582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 291 - 442
Target Start/End: Original strand, 33988199 - 33988350
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| ||||  |||||||||| |||| || |||||||||||||| ||||||||||||||||| ||||| ||| || ||||||||||||| || |||    
T  33988199 ttataactctaattcatattactttcattactcccaattcaatatattccactttacatttatgatagtggagaatacaccaatacttaacaaaaacact 33988298  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtga 442  Q
    |||||| |||||||| | ||   || |||||||||| ||||||||| |||||    
T  33988299 taaaaccatttttctttctccttcatttatacatttgtcttaatatgtgtga 33988350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 291 - 445
Target Start/End: Original strand, 3725185 - 3725339
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| ||||||||||| || | || |||||| ||||||| |||| | |||||||||| ||||| |||||| ||||||||||||| |  |||    
T  3725185 ttataactctaattaatattactttcatcactcacaattcgatatattccactatgcatttatgatagtggagaatgcaccaatacttaacaatagcact 3725284  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    |||||| |||||||||| ||   |  |||||||||||||||||||| ||||||||    
T  3725285 taaaaccatttttctctctccttcctttatacatttttcttaatatgtgtgaaat 3725339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 291 - 459
Target Start/End: Complemental strand, 8369805 - 8369641
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| |||| |||||| |  | | ||||||||||||||| |||||| |||||||||| ||||| |||||| |||||||||||||||  | |    
T  8369805 ttataactctaattaatactactttcacaactttcaattcaatatattccactttgcatttatgatagtggagaatgcaccaatacttaacaagagcatt 8369706  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaatggttca 459  Q
    ||||||||||||||||  |||||   |||||||||| |||||||| ||||||||| |  ||||||||||    
T  8369705 taaaacaatttttctc--tctcc--tttatacatttgtcttaatacatgtgaaatgaaaaaatggttca 8369641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 291 - 383
Target Start/End: Original strand, 20189891 - 20189983
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaa 383  Q
    |||||||| |||| ||||||||||| || ||||||||||||||||||| |||||||||||||||||  |||| ||||||||| ||||||||||    
T  20189891 ttataactctaattaatattactttcatcattctcaattcaatatattccactttacatttatgataatggagaatgcatcagtacttaacaa 20189983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 291 - 454
Target Start/End: Original strand, 858334 - 858497
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| |||| |||||| || | |||||||| ||||||||||| ||| ||||||||||  |||| |||| | ||||| |||||||||  |||    
T  858334 ttataactctaattaatactactttcatcactctcaattaaatatatttcattttgcatttatgataatggagaatgtaccaatatttaacaagataact 858433  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaatg 454  Q
    |||||| |||||| ||| ||    | |||||||||||||||||||| |||||||| ||||||||    
T  858434 taaaaccatttttttctctcctttatttatacatttttcttaatatgtgtgaaatgagcaaatg 858497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 291 - 442
Target Start/End: Complemental strand, 17243063 - 17242912
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| |||| |||||| || | ||||||||||||||||| |||||| |||||||||| || || |||  | ||||||||||||||| ||||    
T  17243063 ttataactctaattaatactactttcatcactctcaattcaatatattccactttgcatttatgatagtagagaatagaccaatacttaacaagagtact 17242964  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtga 442  Q
     ||||| |||||||||| ||   || |||||||||| ||||||||| |||||    
T  17242963 aaaaaccatttttctctctcattcatttatacatttgtcttaatatgtgtga 17242912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 291 - 445
Target Start/End: Complemental strand, 42575747 - 42575593
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    ||||||||||||| |||| |||||| |  | |  |||||||||||||| |||||| |||||||||| ||||| ||| || ||||||||| |||||  |||    
T  42575747 ttataactttaattaatactactttcacaacttccaattcaatatattccactttgcatttatgatagtggagaatacaccaatacttaccaagagcact 42575648  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    |||||| |||||||||| ||   || |||||||||| ||||||||| ||||||||    
T  42575647 taaaaccatttttctctctcattcatttatacatttgtcttaatatgtgtgaaat 42575593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 291 - 444
Target Start/End: Complemental strand, 8692927 - 8692774
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| ||||||||||| |  | |  ||||| ||||||||||| ||| |||||||||| ||||| |||||| |||||||||||||||| |||    
T  8692927 ttataactctaattaatattactttcacaacttccaatttaatatatttcattttgcatttatgatagtggagaatgcaccaatacttaacaagaacact 8692828  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaa 444  Q
    |||||| |||||||||  ||   || ||||| |||| ||||||||| |||||||    
T  8692827 taaaaccatttttctccctccttcatttatatatttgtcttaatatgtgtgaaa 8692774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 326 - 444
Target Start/End: Complemental strand, 35646163 - 35646045
Alignment:
Q  326 aattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttatacatt 425  Q
    ||||||||||||| |||||| |||||||||| ||||| |||||| |||||||||||||||  ||||||||  |||||||||| ||   || ||||| |||    
T  35646163 aattcaatatattccactttgcatttatgatagtggagaatgcaccaatacttaacaagatcacttaaaatcatttttctctctcattcatttatatatt 35646064  T
Q  426 tttcttaatatatgtgaaa 444  Q
    | ||||||||| |||||||    
T  35646063 tgtcttaatatgtgtgaaa 35646045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 289 - 444
Target Start/End: Original strand, 15254762 - 15254917
Alignment:
Q  289 aattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaata 388  Q
    |||||||||| |||| ||||||||||| || | | |||||||||||||||  | ||| |||| ||||| | ||| ||||||  ||||| |||||| || |    
T  15254762 aattataactctaattaatattactttcatcactttcaattcaatatattctaatttgcattaatgatagcggagaatgcactaatacataacaaaaaca 15254861  T
Q  389 cttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaa 444  Q
    |||||||  |||||||| ||||  ||| |||||||||||||||||||  |||||||    
T  15254862 cttaaaatcatttttctttttcctccatttatacatttttcttaatacgtgtgaaa 15254917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 24231042 - 24231125
Alignment:
Q  324 tcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctct 407  Q
    ||||||||||||||| |||||| |||||||| | ||||| ||||||||||||||||||||||| | ||||||  ||||||||||    
T  24231042 tcaattcaatatattccactttccatttatggtagtggagaatgcatcaatacttaacaagaacagttaaaatcatttttctct 24231125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 291 - 454
Target Start/End: Original strand, 42211332 - 42211491
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    ||||||||  ||| |||| |||||| || | || ||||||||||||||||||||| |||||||||| ||||| ||| |    |||||||||||||  |||    
T  42211332 ttataactcaaattaatactactttcatcactcacaattcaatatatttcactttgcatttatgatagtggaaaatac----atacttaacaagagcact 42211427  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaatg 454  Q
    |||||| |||||||||   |   || |||||||||||| ||||||| |||||||| ||||||||    
T  42211428 taaaaccatttttctcccaccttcatttatacattttttttaatatgtgtgaaatgagcaaatg 42211491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 365 - 466
Target Start/End: Complemental strand, 4576445 - 4576344
Alignment:
Q  365 atgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaatggttcacttca 464  Q
    ||||| |||||||| ||||||| |||||||||  ||||||||||| |  || |||||||||||||||||||| |||||||| ||||||  | ||||||||    
T  4576445 atgcaccaatacttgacaagaacacttaaaactgtttttctctttttttcatttatacatttttcttaatatgtgtgaaatgagcaaacagctcacttca 4576346  T
Q  465 tc 466  Q
    ||    
T  4576345 tc 4576344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 289 - 445
Target Start/End: Complemental strand, 16283698 - 16283542
Alignment:
Q  289 aattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaata 388  Q
    |||||||||| ||||  ||  |||||| || | ||||||||||||||||| |||||| |||||||||| || || |||||| |||||| |||||| |  |    
T  16283698 aattataactctaattgatgctactttcatcactctcaattcaatatattccactttgcatttatgatagttgagaatgcaccaatacataacaaaatca 16283599  T
Q  389 cttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
     ||||||| |||||| ||| ||   || |||||||||||| |||||| |||||||||    
T  16283598 tttaaaaccatttttttctctccttcatttatacattttttttaatacatgtgaaat 16283542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 351 - 454
Target Start/End: Original strand, 15814701 - 15814804
Alignment:
Q  351 tatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagca 450  Q
    |||||| ||||| ||| ||  ||||||||||||||   ||||||| ||||||||||| ||   || |||||||||||| |||||||||||||||||||||    
T  15814701 tatgatagtggaaaatacacaaatacttaacaagagcgcttaaaataatttttctctctccttcatttatacattttttttaatatatgtgaaataagca 15814800  T
Q  451 aatg 454  Q
    ||||    
T  15814801 aatg 15814804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 291 - 442
Target Start/End: Complemental strand, 35334635 - 35334484
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| |||| |||||| || | || |||||||||||||| |||||| |||||||||| ||||| |||  |  ||||||||| ||||  |||    
T  35334635 ttataactctaattaatactactttcatcactcccaattcaatatattccactttgcatttatgatagtggagaatagacaaatacttaataagagcact 35334536  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtga 442  Q
    |||||| |||||||||| ||   || ||||| |||| ||||||||| |||||    
T  35334535 taaaactatttttctctctccttcatttatatatttgtcttaatatctgtga 35334484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 325 - 445
Target Start/End: Original strand, 39008161 - 39008285
Alignment:
Q  325 caattcaatatatttcactttacatttatga----tggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttat 420  Q
    |||||||||||||||||||||||||||||||    | ||||| |||| | |||||||||||||||  ||||||||| |||||||||| ||   || ||||    
T  39008161 caattcaatatatttcactttacatttatgatagttagtggagaatgaaccaatacttaacaagagcacttaaaaccatttttctctctccttcatttat 39008260  T
Q  421 acatttttcttaatatatgtgaaat 445  Q
    |||||| | ||||||| ||| ||||    
T  39008261 acatttgttttaatatgtgtaaaat 39008285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 289 - 451
Target Start/End: Complemental strand, 36469205 - 36469043
Alignment:
Q  289 aattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaata 388  Q
    |||||||| | |||| |||| |||||| || | | | |||||||||||||  ||||| |||||||||| ||||| |||||| |||||| |||||| || |    
T  36469205 aattataattctaattaatactactttcatcacttttaattcaatatattatactttgcatttatgatagtggagaatgcaccaatacataacaaaaaca 36469106  T
Q  389 cttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaa 451  Q
    |||| ||  |||||| | | ||   || |||||||||||||||||||| |||||||| |||||    
T  36469105 cttataatcatttttttatctccttcatttatacatttttcttaatatgtgtgaaatgagcaa 36469043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 288 - 385
Target Start/End: Original strand, 17699329 - 17699426
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaaga 385  Q
    |||||||||||||||| |||| |||||| |||| |||||||||||||||||  || |||||||||||||  ||   |||||||||||| || ||||||    
T  17699329 caattataactttaattaatactactttcattactctcaattcaatatattataccttacatttatgatattgagaaatgcatcaataattgacaaga 17699426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 288 - 355
Target Start/End: Original strand, 34534918 - 34534985
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatga 355  Q
    ||||||||||| |||| ||||||||||| || |||||||||||||||||||  |||||| ||||||||    
T  34534918 caattataactctaattaatattacttttatcattctcaattcaatatattatactttatatttatga 34534985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 325 - 407
Target Start/End: Complemental strand, 22582946 - 22582865
Alignment:
Q  325 caattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctct 407  Q
    ||||||||||| || |||||| |||||||||| ||||| ||||||||| ||||||||||||  ||||||||  ||||||||||    
T  22582946 caattcaatat-ttccactttgcatttatgatagtggagaatgcatcattacttaacaagagcacttaaaatcatttttctct 22582865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 454
Target Start/End: Complemental strand, 25344838 - 25344686
Alignment:
Q  300 taatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaaca-a 398  Q
    |||| |||| |||||| || |||||||||||||||||||  ||||||||||||||||  |||  ||||||  |||| || ||   || |||||||| | |    
T  25344838 taattaatactactttcatcattctcaattcaatatattctactttacatttatgataatggtgaatgcactaatatttgac---aacacttaaaaaata 25344742  T
Q  399 tttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaatg 454  Q
    ||||||||| |||  || |||||||||||||||| ||| |||||||| || |||||    
T  25344741 tttttctctctctttcacttatacatttttcttagtatgtgtgaaatgaggaaatg 25344686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 248 - 407
Target Start/End: Original strand, 15898151 - 15898306
Alignment:
Q  248 tatttcacttttcaatacaatattaattacnnnnnnnnnncaattataactttaatcaatattactttaattattctcaattcaatatatttcactttac 347  Q
    ||||||||||||||||||||||||||||||          ||||||||||  |||| ||||||||||| |  | |||||||||||||||||  ||||| |    
T  15898151 tatttcacttttcaatacaatattaattactttttt----caattataacactaattaatattactttcaccactctcaattcaatatattctactttgc 15898246  T
Q  348 atttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctct 407  Q
    |||||||||   | | |||||||||||| |||| ||| | |||||||   ||||||||||    
T  15898247 atttatgataaagaagaatgcatcaatagttaataaggacacttaaactcatttttctct 15898306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 291 - 439
Target Start/End: Original strand, 17935222 - 17935369
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||| |||||| ||||||| ||| || | | |||||| | |||||||||||||  |||||||||| || | ||||||  |||| |||||||||| |||    
T  17935222 ttataattttaattaatattattttcatcactatcaatttattatatttcactttgtatttatgatgatgtagaatgcactaatatttaacaagaacact 17935321  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatg 439  Q
    |||| | |||||| |||  |   || |||||||||||||||||||||||    
T  17935322 taaacctattttt-tctcaccttcatttatacatttttcttaatatatg 17935369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 288 - 441
Target Start/End: Original strand, 4475241 - 4475393
Alignment:
Q  288 caattata-actttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaa 386  Q
    |||||||| ||| |||| |||| |||||| || |||  |||||||| || || |||||| ||||||||||  |||  |||||| |||||||| ||||| |    
T  4475241 caattatacactataattaatactacttttatcatttccaattcaacattttccactttgcatttatgataatggtgaatgcaccaatacttgacaagga 4475340  T
Q  387 tacttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtg 441  Q
     ||| ||  ||||||||||||||||  || ||||||| |||||||||||| ||||    
T  4475341 cactcaa--caatttttctctttctttcacttatacacttttcttaatatgtgtg 4475393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 289 - 356
Target Start/End: Original strand, 31956727 - 31956794
Alignment:
Q  289 aattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    |||||||||| |||| ||||||||||| || | |||||| ||||||||||  ||||||||||||||||    
T  31956727 aattataactctaattaatattacttttatcactctcaactcaatatattcaactttacatttatgat 31956794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 443
Target Start/End: Complemental strand, 36446763 - 36446644
Alignment:
Q  324 tcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttataca 423  Q
    |||||||||||||||  ||||| |||||||||| ||||| ||||||  ||||| |||||| || ||||| ||  |||||| | | ||   || |||||||    
T  36446763 tcaattcaatatattatactttgcatttatgatagtggagaatgcacaaatacataacaaaaacacttataatcatttttttatctccttcatttataca 36446664  T
Q  424 tttttcttaatatatgtgaa 443  Q
    ||||||||||||| ||||||    
T  36446663 tttttcttaatatgtgtgaa 36446644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 459
Target Start/End: Complemental strand, 5357928 - 5357758
Alignment:
Q  289 aattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaata 388  Q
    |||||||||| |||| ||||||||||| |  | |  |||| |||||||||  ||||||||||||||||   | | |||| | |||||||||||||  | |    
T  5357928 aattataactctaattaatattactttcaccacttccaatacaatatattctactttacatttatgataaagaagaatgaaccaatacttaacaaagaca 5357829  T
Q  389 cttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaatggttca 459  Q
    || ||||| |||||||||| ||   || | ||| |||||||||||||  |||| ||| |||||||||||||    
T  5357828 ctcaaaaccatttttctctctccttcactaatatatttttcttaataagtgtgtaatgagcaaatggttca 5357758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 288 - 445
Target Start/End: Complemental strand, 6173092 - 6172935
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaat 387  Q
    ||||||||||| |||| |||| |||||| || | || ||||||||||||||  ||||| ||||||||||  |||  ||||||| |||| || | ||||      
T  6173092 caattataactataattaatactactttcatcactcacaattcaatatattatactttgcatttatgataatggtaaatgcattaatatttgataagagc 6172993  T
Q  388 acttaaaacaatttttctct-ttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    ||||||||| |||||| ||| ||||  || | |||||||||||||||||  ||||||||    
T  6172992 acttaaaactatttttatctcttct-tcactaatacatttttcttaataagtgtgaaat 6172935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 356
Target Start/End: Original strand, 5072946 - 5073014
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    ||||||||||| |||| |||| |||||  |||  || ||||||||||||||| ||||||||||||||||    
T  5072946 caattataactctaattaatactacttccattgctcccaattcaatatattttactttacatttatgat 5073014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 249 - 356
Target Start/End: Complemental strand, 14184197 - 14184093
Alignment:
Q  249 atttcacttttcaatacaatattaattacnnnnnnnnnncaattataactttaatcaatattactttaattattctcaattcaatatatttcactttaca 348  Q
    |||||||||||||||||||||||||||||          ||||||||||| |||| ||||| | ||| |||| |||||||||||||||||  || |||||    
T  14184197 atttcacttttcaatacaatattaattactttttttc--caattataactataattaatatcattttcattactctcaattcaatatattatac-ttaca 14184101  T
Q  349 tttatgat 356  Q
    ||||||||    
T  14184100 tttatgat 14184093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 356
Target Start/End: Complemental strand, 19889645 - 19889577
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    ||||||||||| |||| ||||||||||| |  | | |||||||||||||||  ||||||||||||||||    
T  19889645 caattataactctaattaatattactttcaccactttcaattcaatatattctactttacatttatgat 19889577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 356
Target Start/End: Complemental strand, 42158758 - 42158690
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    |||| |||||| |||| ||||||||||| ||  |||||||||||| |||||| ||||| ||||||||||    
T  42158758 caatcataactctaattaatattactttcatctttctcaattcaacatattttactttgcatttatgat 42158690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 226 - 277
Target Start/End: Complemental strand, 9426724 - 9426673
Alignment:
Q  226 tattgtcctaaaattacttacatatttcacttttcaatacaatattaattac 277  Q
    |||||||||||||| | | ||  |||||||||||||||||||||||||||||    
T  9426724 tattgtcctaaaataattgactcatttcacttttcaatacaatattaattac 9426673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 356
Target Start/End: Original strand, 10044665 - 10044732
Alignment:
Q  289 aattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    |||||||||| |||| ||||||||||| |  | |||||| |||||||| || ||||||||||||||||    
T  10044665 aattataactctaattaatattactttcacaactctcaaatcaatatactttactttacatttatgat 10044732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 226 - 277
Target Start/End: Original strand, 13597966 - 13598017
Alignment:
Q  226 tattgtcctaaaattacttacatatttcacttttcaatacaatattaattac 277  Q
    |||||||||||||| | | ||  |||||||||||||||||||||||||||||    
T  13597966 tattgtcctaaaataattgactcatttcacttttcaatacaatattaattac 13598017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 407
Target Start/End: Original strand, 25108569 - 25108688
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaat 387  Q
    ||||||||| |||||| |||| |||||| |  | |  ||||||||||||||  ||||||||||||||||   | | |||||| |||||||||||||  |     
T  25108569 caattataattttaattaatactactttcaccacttccaattcaatatattatactttacatttatgataaagaagaatgcagcaatacttaacaaagac 25108668  T
Q  388 acttaaaacaatttttctct 407  Q
    ||| ||||| ||||||||||    
T  25108669 actcaaaactatttttctct 25108688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 407
Target Start/End: Original strand, 25167661 - 25167780
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaat 387  Q
    ||||||||| |||||| |||| |||||| |  | |  ||||||||||||||  ||||||||||||||||   | | |||||| |||||||||||||  |     
T  25167661 caattataattttaattaatactactttcaccacttccaattcaatatattatactttacatttatgataaagaagaatgcagcaatacttaacaaagac 25167760  T
Q  388 acttaaaacaatttttctct 407  Q
    ||| ||||| ||||||||||    
T  25167761 actcaaaactatttttctct 25167780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 378
Target Start/End: Original strand, 41184116 - 41184203
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatactt 378  Q
    |||||||| |||| ||||||||||| || |||||||||| ||| |||| ||||||| || ||||||  |||| |||||  ||||||||    
T  41184116 ttataactctaattaatattactttcatcattctcaatttaatttattccactttaaatctatgataatggagaatgccccaatactt 41184203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 345 - 431
Target Start/End: Original strand, 4412434 - 4412520
Alignment:
Q  345 tacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttatacatttttctt 431  Q
    ||||||||| || || || ||||||||||||||||||||| | |||||| |  |||||||||| ||   || |||||||||||||||    
T  4412434 tacatttataatagtagagaatgcatcaatacttaacaagtagacttaatatcatttttctctctccttcatttatacatttttctt 4412520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 291 - 369
Target Start/End: Original strand, 13135752 - 13135830
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgca 369  Q
    ||||||||||||| | || |||||| || | ||  ||||||||||||| |||||| |||||||||| ||||| ||||||    
T  13135752 ttataactttaattactactactttcatcactcctaattcaatatattccactttgcatttatgatagtggagaatgca 13135830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 339
Target Start/End: Complemental strand, 13422463 - 13422413
Alignment:
Q  289 aattataactttaatcaatattactttaattattctcaattcaatatattt 339  Q
    |||||||||| |||| ||||||||||| || | ||||||||||||||||||    
T  13422463 aattataactataattaatattactttcatcactctcaattcaatatattt 13422413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 356
Target Start/End: Complemental strand, 17741285 - 17741214
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaa---tatatttcactttacatttatgat 356  Q
    ||||||||||| |||| ||||||||||| || | |||||||||||   ||||||  ||||||||||||||||    
T  17741285 caattataactataattaatattactttcatcactctcaattcaatactatattatactttacatttatgat 17741214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 445
Target Start/End: Complemental strand, 28057866 - 28057785
Alignment:
Q  364 aatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    ||||||||||||||||||||| | | ||||||  |||||||||| ||   || |||||||||||||||| ||  ||||||||    
T  28057866 aatgcatcaatacttaacaagtacatttaaaattatttttctctctccttcatttatacatttttcttagtacgtgtgaaat 28057785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 445
Target Start/End: Original strand, 41184732 - 41184813
Alignment:
Q  364 aatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    |||||| ||||||||||||||   ||||||||| |||||||| | ||   || |||||||||||||||||||  ||||||||    
T  41184732 aatgcaccaatacttaacaagtgcacttaaaactatttttctttctccttcatttatacatttttcttaatacgtgtgaaat 41184813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Complemental strand, 4044624 - 4044596
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  4044624 atttcacttttcaatacaatattaattac 4044596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Original strand, 4194600 - 4194628
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  4194600 atttcacttttcaatacaatattaattac 4194628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Original strand, 4412343 - 4412371
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  4412343 atttcacttttcaatacaatattaattac 4412371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 292 - 380
Target Start/End: Complemental strand, 6735465 - 6735377
Alignment:
Q  292 tataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaa 380  Q
    ||||||| |||| ||||||||||| || | |   |||| |||||||| |||||| |||||||||| ||||| ||||||  |||||||||    
T  6735465 tataactctaattaatattactttcatcacttcaaatttaatatattccactttgcatttatgatagtggagaatgcacaaatacttaa 6735377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Complemental strand, 13016512 - 13016484
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  13016512 atttcacttttcaatacaatattaattac 13016484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Complemental strand, 13087890 - 13087862
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  13087890 atttcacttttcaatacaatattaattac 13087862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Original strand, 20369235 - 20369263
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  20369235 atttcacttttcaatacaatattaattac 20369263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Original strand, 24534562 - 24534590
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  24534562 atttcacttttcaatacaatattaattac 24534590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Original strand, 25814324 - 25814352
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  25814324 atttcacttttcaatacaatattaattac 25814352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Original strand, 31090264 - 31090292
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  31090264 atttcacttttcaatacaatattaattac 31090292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 461
Target Start/End: Original strand, 31956850 - 31956894
Alignment:
Q  417 ttatacatttttcttaatatatgtgaaataagcaaatggttcact 461  Q
    |||||||| |||||||||||||||||||| || |||| |||||||    
T  31956850 ttatacatatttcttaatatatgtgaaatgagaaaattgttcact 31956894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Complemental strand, 39036003 - 39035975
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  39036003 atttcacttttcaatacaatattaattac 39035975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 356
Target Start/End: Original strand, 42479538 - 42479606
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    ||||||||||| |||| ||| ||||||| || ||| |||||| |||||||| || ||| ||||||||||    
T  42479538 caattataactataattaatgttacttttatcattttcaatttaatatattgcattttgcatttatgat 42479606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Complemental strand, 42575786 - 42575758
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  42575786 atttcacttttcaatacaatattaattac 42575758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 445
Target Start/End: Complemental strand, 42870967 - 42870939
Alignment:
Q  417 ttatacatttttcttaatatatgtgaaat 445  Q
    |||||||||||||||||||||||||||||    
T  42870967 ttatacatttttcttaatatatgtgaaat 42870939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 291 - 459
Target Start/End: Original strand, 98824 - 98992
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| ||||||| ||| || | ||||||||||||||||| ||||||| |||||| ||||||||||||||| ||||||||| |||||  |||    
T  98824 ttataactctaattaatattattttcatcactctcaattcaatatattccactttatatttattatggtggataatgcaccaatacttatcaagagcact 98923  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaatggttca 459  Q
    |||||  |||||||||| ||   || |||||||||||||||||||| |||||||| | |||||||||||    
T  98924 taaaatcatttttctctctcattcatttatacatttttcttaatatgtgtgaaatgaacaaatggttca 98992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 4e-33; HSPs: 76)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 291 - 455
Target Start/End: Original strand, 28301433 - 28301597
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| |||| |||||| || | |||||||||||||||||||||||| |||||||||| ||||| |||  | |||||||||||||||  |||    
T  28301433 ttataactctaattaatactactttcatcactctcaattcaatatatttcactttgcatttatgatagtggagaatagaccaatacttaacaagagcact 28301532  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaatgg 455  Q
    |||||| |||||||||||||   || |||||||||| |||||||||||||||  | |||||||||    
T  28301533 taaaaccatttttctctttccttcatttatacatttgtcttaatatatgtgatttgagcaaatgg 28301597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 226 - 444
Target Start/End: Complemental strand, 18181384 - 18181168
Alignment:
Q  226 tattgtcctaaaattacttacatatttcacttttcaatacaatattaattacnnnnnnnnnncaattataactttaatcaatattactttaattattctc 325  Q
    |||||||||||||| ||| ||  ||||||||||||||||||||||||||||            |||||||||| |||| |||| |||||| ||||||| |    
T  18181384 tattgtcctaaaataactgacccatttcacttttcaatacaatattaatta--ttttttttctaattataactctaattaatactactttcattattccc 18181287  T
Q  326 aattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttatacatt 425  Q
    ||||||| |||||  ||||| |||||||||| ||||| |||||| |||||| |||||| |  ||||||||| |||||||||| |||| || ||||||| |    
T  18181286 aattcaaaatattctactttgcatttatgatagtggagaatgcaccaatacataacaaaagcacttaaaaccatttttctctctctctcacttatacact 18181187  T
Q  426 tttcttaatatatgtgaaa 444  Q
    ||||||||| | |||||||    
T  18181186 tttcttaatctgtgtgaaa 18181168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 291 - 445
Target Start/End: Complemental strand, 43077834 - 43077680
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| ||||||||||| || ||| ||||||||||||||||||||||||||||||||  ||||| |||||| ||||| |||||||| | | |    
T  43077834 ttataactctaattaatattactttcatcattttcaattcaatatatttcactttacatttatgacagtggaaaatgcaccaatagttaacaagtacatt 43077735  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    |||||| |||||||||| ||   || |||||||||| ||||||||  ||||||||    
T  43077734 taaaactatttttctctctcattcatttatacatttgtcttaatacgtgtgaaat 43077680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 291 - 436
Target Start/End: Complemental strand, 30757676 - 30757531
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| |||| |||||| || |||| |||||||||||||| || |||||||||||||| ||||| ||||||| |||||||||||||   |||    
T  30757676 ttataactctaattaatactactttcatcattcccaattcaatatattccaatttacatttatgatagtggaaaatgcattaatacttaacaagtgcact 30757577  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatat 436  Q
    |||||| |||||||||| ||   || ||||||||||||||||||||    
T  30757576 taaaactatttttctctctccttcatttatacatttttcttaatat 30757531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 288 - 404
Target Start/End: Complemental strand, 16865045 - 16864930
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaat 387  Q
    ||||||||||| |||| ||||| ||||| || |||| |||||||||||||||||||||||||||||||   ||| |||||||||||||||| ||||||||    
T  16865045 caattataactctaattaatatcactttcatcattcacaattcaatatatttcactttacatttatga-aatggttaatgcatcaatacttgacaagaat 16864947  T
Q  388 acttaaaacaatttttc 404  Q
    ||||||||| |||||||    
T  16864946 acttaaaaccatttttc 16864930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 293 - 445
Target Start/End: Complemental strand, 435184 - 435030
Alignment:
Q  293 ataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatactta 392  Q
    ||||||||||| |||| |||||| || ||||||||||||||||||||||||||||||||||||| ||||| ||||||  |||| ||||||||   |||||    
T  435184 ataactttaattaatactactttcatcattctcaattcaatatatttcactttacatttatgatagtggagaatgcactaatatttaacaagtgcactta 435085  T
Q  393 aaacaatttttctctttctcccagttatac--atttttcttaatatatgtgaaat 445  Q
    |||| |||||| ||| |||  || ||||||  |||||||||||||  ||||||||    
T  435084 aaactatttttgtctctctttcatttatacatatttttcttaatacgtgtgaaat 435030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 291 - 442
Target Start/End: Complemental strand, 37247992 - 37247841
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| ||||||||||| || |  ||||||||||||||||||||||| |||||||||| ||||| |||  | |||||||||||||||  |||    
T  37247992 ttataactctaattaatattactttcatcacactcaattcaatatatttcactttgcatttatgatagtggagaatagaccaatacttaacaagagcact 37247893  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtga 442  Q
    |||||| |||||| ||||||   |  |||||||||| |||||||||||||||    
T  37247892 taaaactatttttttctttccttcttttatacatttgtcttaatatatgtga 37247841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 291 - 445
Target Start/End: Original strand, 23684958 - 23685112
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| |||| |||||| || | |||||||||||||||||||||||| |||||||||| ||||| ||||||  |||||||||||| || |||    
T  23684958 ttataactctaattaatactactttcatcactctcaattcaatatatttcactttgcatttatgatagtggagaatgcactaatacttaacaaaaacact 23685057  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    |||||| | |||||||| ||    | ||||||||||||||||||||  |||||||    
T  23685058 taaaactaattttctctctcctttatttatacatttttcttaatatgcgtgaaat 23685112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 291 - 445
Target Start/End: Complemental strand, 28108483 - 28108329
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| |||| |||||| || ||||||||||||||||||| |||||||||| |||||| ||||| |||||| ||||||||||||||   |||    
T  28108483 ttataactctaattaatactactttcatcattctcaattcaatatattccactttacatgtatgatagtggagaatgcaccaatacttaacaagtgcact 28108384  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    |||||| |||||||||| ||   || |||||  ||||||||||||  ||||||||    
T  28108383 taaaactatttttctctctccttcatttataattttttcttaatacgtgtgaaat 28108329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 291 - 445
Target Start/End: Complemental strand, 28925956 - 28925802
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| |||| |  ||| || |||| |||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||   |||    
T  28925956 ttataactctaattaatactgttttgatcattcccaattcaatatatttcactttacaattatgatagtggagaatgcatcaatacttaacaagtgcact 28925857  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    |||||| |||||||||| ||    | |||||||||||||||||||  ||||||||    
T  28925856 taaaactatttttctctctcctttatttatacatttttcttaatacgtgtgaaat 28925802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 288 - 462
Target Start/End: Complemental strand, 31546129 - 31545955
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaat 387  Q
    ||||||||||| ||||||||| |||||| || | ||| || | |||||||| |||||| ||||| |||| ||||| | |||||||||| |||||||||      
T  31546129 caattataactctaatcaatactactttcatcactcttaactaaatatattccactttgcatttgtgatagtggagagtgcatcaatatttaacaagatc 31546030  T
Q  388 acttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaatggttcactt 462  Q
    ||||||||| | |||||  | ||   || |||||||||||| |||||||||||||||| |||||||| |||||||    
T  31546029 acttaaaaccacttttccttctccttcatttatacattttttttaatatatgtgaaatgagcaaatgattcactt 31545955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 291 - 445
Target Start/End: Original strand, 41436078 - 41436231
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| |||| |||||| || ||||||||||||||||||| |||||| |||||||||| ||| | ||| |||||||||||||||| || |||    
T  41436078 ttataactctaattaatactactttcatcattctcaattcaatatattccactttgcatttatgatagtgaagaatacatcaatacttaacaaaaacact 41436177  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    |||||  | |||||||| |    || |||||||||||||||||||| ||||||||    
T  41436178 taaaatta-ttttctctctaattcatttatacatttttcttaatatgtgtgaaat 41436231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 322 - 453
Target Start/End: Original strand, 2882015 - 2882147
Alignment:
Q  322 tctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttata 421  Q
    ||||||| |||||||||||||||| |||||||||| ||||| |||||| |||||||||||||||  ||||||||  |||||||| | |||  || |||||    
T  2882015 tctcaatacaatatatttcactttgcatttatgatagtggagaatgcaccaatacttaacaagagcacttaaaatcatttttctatctctttcatttata 2882114  T
Q  422 ca-tttttcttaatatatgtgaaataagcaaat 453  Q
    || ||||||||||||||  |||||| |||||||    
T  2882115 cattttttcttaatatacatgaaatgagcaaat 2882147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 291 - 407
Target Start/End: Original strand, 8031740 - 8031856
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    ||||||||||||| |||| |||||| || |||| ||||||||||||||| ||||| ||||||||||  |||| ||| ||||||||||||||||||| ||     
T  8031740 ttataactttaattaatactacttttatcattcacaattcaatatatttaactttgcatttatgataatggagaatacatcaatacttaacaagaacaca 8031839  T
Q  391 taaaacaatttttctct 407  Q
    |||||  ||||||||||    
T  8031840 taaaatcatttttctct 8031856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 289 - 445
Target Start/End: Complemental strand, 8550752 - 8550596
Alignment:
Q  289 aattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaata 388  Q
    |||||||||| |||| |||| |||||| || | ||| |||||||||||||  ||||| ||||||||||  |||| ||||||  ||||||| ||||||| |    
T  8550752 aattataactataattaatactactttcatcactcttaattcaatatattagactttgcatttatgataatggagaatgcacaaatacttgacaagaaca 8550653  T
Q  389 cttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    |||||||| | |||||||| |||  || |||||||||||||| ||| | ||||||||    
T  8550652 cttaaaaccacttttctctctctttcacttatacatttttctaaatgtgtgtgaaat 8550596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 291 - 445
Target Start/End: Complemental strand, 13375298 - 13375142
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatata-tttcactttacatttatgatggtggataatgcatcaata-cttaacaagaata 388  Q
    |||||||| |||| ||||||| ||| || ||||||||||||||||| |||||||||||||||||||| ||||| |||||| ||||| ||||||||    |    
T  13375298 ttataactctaattaatattattttcatcattctcaattcaatatattttcactttacatttatgatagtggagaatgcaccaataccttaacaactgca 13375199  T
Q  389 cttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    |||||||  |||| ||||| ||   || |||||||||||||||||||  ||||||||    
T  13375198 cttaaaattatttatctctctccttcatttatacatttttcttaatacgtgtgaaat 13375142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 291 - 445
Target Start/End: Complemental strand, 24775916 - 24775764
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| | || |||| |||||| || ||| | ||||||||||||||||||||||||||||||| ||||| ||| || ||||||||||||||   |||    
T  24775916 ttataactctgattaatactactttcatcatttttaattcaatatatttcactttacatttatgatagtggagaatacaccaatacttaacaagtgcact 24775817  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    |||||  |||||||||| ||   || |||||||||||||  ||||| ||||||||    
T  24775816 taaaattatttttctctctccttcatttatacatttttc--aatatgtgtgaaat 24775764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 226 - 454
Target Start/End: Complemental strand, 33602402 - 33602171
Alignment:
Q  226 tattgtcctaaaattacttacatatttcacttttcaatacaatattaattacnnnnnnnnnncaattataactttaatcaatattactttaattattctc 325  Q
    |||||| ||||||| ||| |  |||||||||||||||||||||||||||||            |||||||||| |||| ||| ||||||| || | ||||    
T  33602402 tattgttctaaaataactgatctatttcacttttcaatacaatattaattattatttttttctaattataactctaattaatgttactttcatcactctc 33602303  T
Q  326 aattcaatat---atttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttatac 422  Q
    ||||||||||   ||| |||||| |||||||||||||| | ||||||  ||||| ||||||||  ||||||||| |||||| |   |||   | ||||||    
T  33602302 aattcaatattatattccactttgcatttatgatggtgaagaatgcactaatacataacaagagcacttaaaaccattttttttcctcttttatttatac 33602203  T
Q  423 atttttcttaatatatgtgaaataagcaaatg 454  Q
    |||||||||||||| ||| |||| ||||||||    
T  33602202 atttttcttaatatgtgtaaaatgagcaaatg 33602171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 230 - 445
Target Start/End: Complemental strand, 5212124 - 5211912
Alignment:
Q  230 gtcctaaaattacttacatatttcacttttcaatacaatattaattacnnnnnnnnnncaattataactttaatcaatattactttaattattctcaatt 329  Q
    |||||||||| ||| |  ||||||||||||||||||||||||||||||          |  |||||| |||||| |||| |||||| |  | | ||||||    
T  5212124 gtcctaaaataactgagttatttcacttttcaatacaatattaattacttttttt---cctttataaatttaattaatactactttcacaactttcaatt 5212028  T
Q  330 caatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctct-ttctcccagttatacattttt 428  Q
    ||||||||| |||||| |||||||||| || |||||||||  ||||||||||||||  ||||||||| ||||||| || ||||  || |||||||||| |    
T  5212027 caatatattccactttgcatttatgatagttgataatgcacaaatacttaacaagagcacttaaaactatttttccctcttct-tcatttatacatttgt 5211929  T
Q  429 cttaatatatgtgaaat 445  Q
     ||||||| ||||||||    
T  5211928 tttaatatgtgtgaaat 5211912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 289 - 454
Target Start/End: Complemental strand, 11726832 - 11726667
Alignment:
Q  289 aattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaata 388  Q
    |||||||| |||||| |||| |||||| || | ||| |||||||||||||  ||||| || ||||||| ||||| ||||||| ||||| |||||| | ||    
T  11726832 aattataattttaattaatactactttcatcactcttaattcaatatattctactttgcaattatgatagtggagaatgcattaatacataacaatagta 11726733  T
Q  389 cttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaatg 454  Q
    |||||||| |||||||||| ||   ||  ||||||||||| ||||||  ||| |||| ||||||||    
T  11726732 cttaaaactatttttctctctccttcatctatacatttttgttaatacgtgttaaatgagcaaatg 11726667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 340 - 455
Target Start/End: Original strand, 565137 - 565252
Alignment:
Q  340 cactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttatacatttttcttaatatatg 439  Q
    |||||| |||||||||| ||||| |||||| |||||||||||||||| ||||||||  |||||||| | ||   ||  |||||||||||||||| || ||    
T  565137 cactttgcatttatgatagtggagaatgcaccaatacttaacaagaacacttaaaatcatttttctttctccttcatatatacatttttcttaaaatgtg 565236  T
Q  440 tgaaataagcaaatgg 455  Q
    | ||||||||||||||    
T  565237 taaaataagcaaatgg 565252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 291 - 454
Target Start/End: Original strand, 28526963 - 28527126
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| ||||||||||| |  | |  |||||||||||| | |||||||||| |||| | ||| | ||||||  ||||||||||||||  |||    
T  28526963 ttataactataattaatattactttcacaacttccaattcaatatagtccactttacatatatggtagtgaagaatgcacgaatacttaacaagagcact 28527062  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaatg 454  Q
    |||||| |||||| | | ||   || |||||||||||||||||||| |||||||| ||||||||    
T  28527063 taaaaccatttttttttctccttcatttatacatttttcttaatatgtgtgaaatgagcaaatg 28527126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 326 - 445
Target Start/End: Complemental strand, 36103374 - 36103255
Alignment:
Q  326 aattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttatacatt 425  Q
    ||||||||||||| || |||| ||| ||||| ||||| |||||||| |||||||||||||| ||||||||  |||||||||| ||   || || ||||||    
T  36103374 aattcaatatattccattttatattcatgatagtggagaatgcatcgatacttaacaagaacacttaaaatcatttttctctctccttcatttgtacatt 36103275  T
Q  426 tttcttaatatatgtgaaat 445  Q
    |||||||||| || ||||||    
T  36103274 tttcttaatacatatgaaat 36103255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 288 - 454
Target Start/End: Original strand, 39095627 - 39095793
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaat 387  Q
    |||||||||||||||| ||||||||||| || | |  |||||||||||||| |||||| ||||||||||  |||| |||| ||||||||||  | ||||     
T  39095627 caattataactttaattaatattactttcatcactgacaattcaatatattccactttgcatttatgataatggagaatgtatcaatacttctcgagaac 39095726  T
Q  388 acttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaatg 454  Q
    |||| |||  |||||| ||| |    || |||||||||||||| ||||||||| |||| || |||||    
T  39095727 acttcaaatgatttttttctctacttcatttatacatttttctcaatatatgtaaaatgagaaaatg 39095793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 324 - 454
Target Start/End: Complemental strand, 43950523 - 43950393
Alignment:
Q  324 tcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttataca 423  Q
    |||||||||||||||  ||||| |||||||| |  |||| ||| |||||||||||||||| || | ||||||| |||||||||| |||  || |||||||    
T  43950523 tcaattcaatatattctactttgcatttatgttaatggaaaatacatcaatacttaacaaaaacatttaaaactatttttctctctctttcacttataca 43950424  T
Q  424 tttttcttaatatatgtgaaataagcaaatg 454  Q
    ||||| ||||||  |||||||| || |||||    
T  43950423 ttttttttaataagtgtgaaatgagtaaatg 43950393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 291 - 395
Target Start/End: Complemental strand, 7650083 - 7649979
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| |||| ||  || || ||| ||||||||||||||| |||||| |||||||||| ||||| ||||||||| ||||||||||||  |||    
T  7650083 ttataactctaattaatactatcttcatcattttcaattcaatatattccactttgcatttatgatagtggagaatgcatcagtacttaacaagagcact 7649984  T
Q  391 taaaa 395  Q
    |||||    
T  7649983 taaaa 7649979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 325 - 445
Target Start/End: Original strand, 28572241 - 28572360
Alignment:
Q  325 caattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttatacat 424  Q
    ||||||||||||||||| ||| |||||||||| ||||| |||||| |||||||||||||||  ||||||||  | |||||||| ||    | ||||||||    
T  28572241 caattcaatatatttcattttgcatttatgatagtggagaatgcaccaatacttaacaagagcacttaaaatca-ttttctctctcctttatttatacat 28572339  T
Q  425 ttttcttaatatatgtgaaat 445  Q
    || ||||||||| ||||||||    
T  28572340 ttgtcttaatatgtgtgaaat 28572360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 325 - 436
Target Start/End: Complemental strand, 44534557 - 44534446
Alignment:
Q  325 caattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttatacat 424  Q
    |||||||||||||| |||||| |||||||||| ||||| |||| | |||||||||||||||| | ||||||  |||||| ||| ||   || ||||||||    
T  44534557 caattcaatatattccactttgcatttatgatagtggagaatgtaccaatacttaacaagaacatttaaaatcatttttttctgtccttcatttatacat 44534458  T
Q  425 ttttcttaatat 436  Q
    || |||||||||    
T  44534457 ttgtcttaatat 44534446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 325 - 407
Target Start/End: Original strand, 3100433 - 3100515
Alignment:
Q  325 caattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctct 407  Q
    ||||| |||||||| |||||| |||||||||| ||||| |||||| |||||||||||||||  ||||||||  ||||||||||    
T  3100433 caatttaatatattccactttgcatttatgatagtggagaatgcagcaatacttaacaagatcacttaaaatcatttttctct 3100515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 288 - 385
Target Start/End: Complemental strand, 44424374 - 44424277
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaaga 385  Q
    ||||||||||| |||| |||| |||||| || |||||||||||||||||||  ||||| ||||||||||  |  | ||||||||||||||| ||||||    
T  44424374 caattataactctaattaatactactttcatcattctcaattcaatatattcaactttgcatttatgataataaaaaatgcatcaatacttgacaaga 44424277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 249 - 395
Target Start/End: Original strand, 4794530 - 4794676
Alignment:
Q  249 atttcacttttcaatacaatattaattacnnnnnnnnnncaattataactttaatcaatattactttaattattctcaattcaatatatttcactttaca 348  Q
    ||||||||||||||||||||||||||||           ||||||||||| |||| |||| |||||| || | | ||||||||||||||| |||||| ||    
T  4794530 atttcacttttcaatacaatattaattaatttttttctccaattataactctaattaatactactttcatcactttcaattcaatatattccactttgca 4794629  T
Q  349 tttatgatggtggataatgcatcaatacttaacaagaatacttaaaa 395  Q
    ||||||||  |  | |||||||||||| || ||||||| ||| ||||    
T  4794630 tttatgataataaaaaatgcatcaatatttgacaagaacactcaaaa 4794676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 288 - 452
Target Start/End: Complemental strand, 6213961 - 6213797
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaat 387  Q
    ||||| |||||||||| |||| |||||| || | ||| |||| ||||||||  ||||| ||||||||||  |||  |||| | |||||||| || ||||     
T  6213961 caattttaactttaattaatactactttcatcactcttaattgaatatattctactttgcatttatgataatggtaaatgaagcaatacttgacgagaac 6213862  T
Q  388 acttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaa 452  Q
    ||||||||  |||||||||||||   || | || ||||||||||||||  |||||||| ||||||    
T  6213861 acttaaaatcatttttctctttcattcactaattcatttttcttaataagtgtgaaatgagcaaa 6213797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 288 - 452
Target Start/End: Complemental strand, 10069696 - 10069532
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaat 387  Q
    |||| |||||| |||| |||| |||||| || | |||||||||||||||||  ||||| ||||||||||  |||  ||||||  ||||||| |||| | |    
T  10069696 caatgataactctaattaataatactttcatcactctcaattcaatatattcgactttgcatttatgataatggtaaatgcacaaatacttgacaaaagt 10069597  T
Q  388 acttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaa 452  Q
    ||||||||  |||||| ||| |||  || ||||| ||||||||||||   |||||||| ||||||    
T  10069596 acttaaaatcatttttatctctctttcacttatatatttttcttaatgagtgtgaaatgagcaaa 10069532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 291 - 407
Target Start/End: Original strand, 10818620 - 10818736
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| ||||| ||||| || | ||  ||||||||| |||||||||| ||||||||||  | || |||||| ||||||||||||||| | |     
T  10818620 ttataactctaattaatatcactttcatcactcctaattcaatacatttcactttgcatttatgatactagagaatgcaccaatacttaacaagagtgca 10818719  T
Q  391 taaaacaatttttctct 407  Q
    |||||| ||||||||||    
T  10818720 taaaaccatttttctct 10818736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 326 - 444
Target Start/End: Complemental strand, 15859415 - 15859300
Alignment:
Q  326 aattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttatacatt 425  Q
    |||||||||||||||||||| |||||||    ||||| |||||  ||||||||||||| | |||||||||| |||||||||| ||   || ||||| |||    
T  15859415 aattcaatatatttcactttgcatttatt---gtggagaatgccccaatacttaacaaaagtacttaaaactatttttctctctccttcatttatatatt 15859319  T
Q  426 tttcttaatatatgtgaaa 444  Q
    | ||||||||| |||||||    
T  15859318 tgtcttaatatgtgtgaaa 15859300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 348 - 455
Target Start/End: Original strand, 32556228 - 32556333
Alignment:
Q  348 atttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataa 447  Q
    |||||||||| |||  |||||| |||||||| ||||| ||||||||||| |||||||||  |||  || ||||||| |||||||||||| |||||||| |    
T  32556228 atttatgatgatggtgaatgcaccaatacttgacaaggatacttaaaaccatttttctc--tctttcacttatacacttttcttaatatgtgtgaaatga 32556325  T
Q  448 gcaaatgg 455  Q
     |||||||    
T  32556326 acaaatgg 32556333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 288 - 385
Target Start/End: Complemental strand, 7420988 - 7420891
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaaga 385  Q
    |||||||||||||||| ||||||| |||  ||| |||| ||| ||||||||| ||||| ||||||||||  |||| ||||||| |||| || ||||||    
T  7420988 caattataactttaattaatattaatttcgttactctctattaaatatattttacttttcatttatgataatggaaaatgcattaatatttgacaaga 7420891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 288 - 356
Target Start/End: Complemental strand, 7931607 - 7931539
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    ||||||||||| |||| |||| |||||| |  | |||||||||||||||||| ||||||||||||||||    
T  7931607 caattataactctaattaatactactttcacaactctcaattcaatatattttactttacatttatgat 7931539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 288 - 445
Target Start/End: Original strand, 2048288 - 2048445
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaat 387  Q
    ||||||||||| |||| ||||||| ||| | || |||||||||||||||||  ||||| ||||||||||     | |||||| ||||| || | ||||      
T  2048288 caattataactctaattaatattattttcactactctcaattcaatatattctactttgcatttatgataaacaagaatgcaccaatagttgataagagc 2048387  T
Q  388 acttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    ||| | ||| |||||||||| |||  || |||||||||||| ||||||  ||||||||    
T  2048388 actcataaccatttttctctctctttcacttatacattttttttaataagtgtgaaat 2048445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 325 - 445
Target Start/End: Original strand, 2756707 - 2756827
Alignment:
Q  325 caattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctct-ttctcccagttataca 423  Q
    ||||| ||||||||  ||||||||||||||||  |||  ||||||  ||||||| ||||||  |||||||| ||||||||||| ||||  || | |||||    
T  2756707 caatttaatatattctactttacatttatgataatggtaaatgcactaatacttgacaagagcacttaaaataatttttctctcttct-tcattaataca 2756805  T
Q  424 tttttcttaatatatgtgaaat 445  Q
    ||||||||||||  ||||||||    
T  2756806 tttttcttaataagtgtgaaat 2756827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 288 - 385
Target Start/End: Original strand, 19515877 - 19515974
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaaga 385  Q
    ||||||||||| |||| |||| |||||| |||| |  ||||||||||||||| ||||| ||||||||||  || | |||| | |||||||| ||||||    
T  19515877 caattataactctaattaatactactttcattacttacaattcaatatattttactttgcatttatgataatgaaaaatgaaccaatacttgacaaga 19515974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 376
Target Start/End: Original strand, 37028757 - 37028842
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatac 376  Q
    |||||||| |||| ||||||||||| || | | ||| ||||  |||||||||||||||||||||||  |||||||| || ||||||    
T  37028757 ttataactctaattaatattactttcatcactttcagttcataatatttcactttacatttatgataatggataatacaccaatac 37028842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 320 - 405
Target Start/End: Original strand, 43056403 - 43056488
Alignment:
Q  320 attctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttct 405  Q
    |||| ||||||||||||||  ||||||||||||||||  | |  |||| ||||||| || | |||| |||||||||||||||||||    
T  43056403 attcccaattcaatatattatactttacatttatgataatcgtaaatgtatcaatatttgaaaagagtacttaaaacaatttttct 43056488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 356
Target Start/End: Complemental strand, 29938013 - 29937957
Alignment:
Q  300 taatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    |||| ||||||||||| || |||||||||||||||||||| |||||  |||||||||    
T  29938013 taattaatattacttttatcattctcaattcaatatattttactttgtatttatgat 29937957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 356
Target Start/End: Original strand, 31592546 - 31592614
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    |||||||||||||||| ||||||| ||| || | |||||||||||||||||  |||||  |||||||||    
T  31592546 caattataactttaattaatattattttcatcactctcaattcaatatattctactttgtatttatgat 31592614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 356
Target Start/End: Complemental strand, 39166807 - 39166739
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    ||||||| ||||||||  |||||||||| | || || ||||||||||||||  ||||||||||||||||    
T  39166807 caattatgactttaatttatattactttcactactcccaattcaatatattatactttacatttatgat 39166739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 445
Target Start/End: Original strand, 3123642 - 3123799
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaata---tatttcactttacatttatgatggtggataatgcatcaatacttaacaagaat 387  Q
    |||||||| |||| ||||||| ||| || | || ||||||||||   |||| || |||  ||||||||| ||| | |||||| ||||||||||  | |      
T  3123642 ttataactctaattaatattattttcatcactcacaattcaatactatattccattttgtatttatgatagtgaagaatgcaccaatacttaatgaaagc 3123741  T
Q  388 acttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    ||||||||  |||||||||| |    ||||||||||||||||||||||| ||||||||    
T  3123742 acttaaaattatttttctctctacttcagttatacatttttcttaatatgtgtgaaat 3123799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 226 - 277
Target Start/End: Original strand, 12872937 - 12872988
Alignment:
Q  226 tattgtcctaaaattacttacatatttcacttttcaatacaatattaattac 277  Q
    |||||| | ||||| ||| ||||||||||||||||||| |||||||||||||    
T  12872937 tattgtaccaaaataactgacatatttcacttttcaattcaatattaattac 12872988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 355
Target Start/End: Original strand, 18460484 - 18460551
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatga 355  Q
    ||||||||||| |||| ||||||||||  |  | |||||||||||||||||  |||||||||||||||    
T  18460484 caattataactctaattaatattacttctacaactctcaattcaatatattctactttacatttatga 18460551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 356
Target Start/End: Original strand, 28844056 - 28844123
Alignment:
Q  289 aattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    |||||||||| |||| |||| |||||| |  | |||||||||||||||||  ||||||||||||||||    
T  28844056 aattataactctaataaataatactttcaccactctcaattcaatatattatactttacatttatgat 28844123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 454
Target Start/End: Complemental strand, 45464327 - 45464160
Alignment:
Q  289 aattataactttaatcaatattactttaattattctcaattcaatatat-ttc-actttacatttatgatggtggataatgcatcaatacttaacaagaa 386  Q
    |||||||||| |||| ||||||||| | || | |||||||| ||||||| ||| | ||| |||| |||||  ||  |||||||  || |||||||||||     
T  45464327 aattataactctaattaatattactatcatcactctcaatttaatatatcttctattttgcattaatgataatgattaatgcacaaacacttaacaagag 45464228  T
Q  387 tacttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaatg 454  Q
     | ||||||  |||||| ||| ||   || |||||||||||||||||||| |||||||| ||||||||    
T  45464227 catttaaaatcatttttttctctcattcacttatacatttttcttaatatgtgtgaaatgagcaaatg 45464160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 427
Target Start/End: Complemental strand, 734121 - 733984
Alignment:
Q  289 aattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaata 388  Q
    |||||||||| |||| ||||||||||| || | || ||| ||||||||||| ||| ||||||||||||  | |  |||||| ||||| || |||| ||||    
T  734121 aattataactctaat-aatattactttcatcactcccaactcaatatattttactatacatttatgataatagtgaatgcaccaatatttgacaaaaata 734023  T
Q  389 cttaaaacaatttttctctttctcccagttatacatttt 427  Q
     | ||||  |||||||||| |||  || |||||||||||    
T  734022 ttcaaaatcatttttctctctctttcatttatacatttt 733984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 378
Target Start/End: Original strand, 3487390 - 3487480
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatactt 378  Q
    ||||||| ||| |||| ||||||||||| || | |||||||||||||||||  ||||| ||||| | ||  |||  |||||||||||||||    
T  3487390 caattattactctaattaatattactttcatcactctcaattcaatatattctactttgcatttgtaataatggtaaatgcatcaatactt 3487480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 356
Target Start/End: Complemental strand, 6972691 - 6972583
Alignment:
Q  249 atttcacttttcaatacaatattaattacnnnnnnnnnn-caattataactttaatcaatattactttaattattctcaattcaatatatttcactttac 347  Q
    |||||||||||||||||||||||||||||           ||||||||||  |||| ||||||||||| |  | |||||||||||||||||  ||||| |    
T  6972691 atttcacttttcaatacaatattaattacttttttttcttcaattataacactaattaatattacttttaccactctcaattcaatatattctactttgc 6972592  T
Q  348 atttatgat 356  Q
    |||||||||    
T  6972591 atttatgat 6972583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 291 - 353
Target Start/End: Original strand, 7213474 - 7213536
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttat 353  Q
    |||||||| |||| |||| |||||| |  | ||||||||||||||||| ||||||||||||||    
T  7213474 ttataactctaattaatactactttcacaactctcaattcaatatattccactttacatttat 7213536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 396
Target Start/End: Complemental strand, 13718882 - 13718812
Alignment:
Q  326 aattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaac 396  Q
    |||||||||| ||| ||||| ||||||||||| |||  |||| |||||||||| |||||  ||||||||||    
T  13718882 aattcaatattttttactttgcatttatgatgatggtgaatgtatcaatacttcacaagcgtacttaaaac 13718812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 320 - 445
Target Start/End: Original strand, 36748176 - 36748301
Alignment:
Q  320 attctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatactt-aacaagaatacttaaaacaatttttctctttctcccagtt 418  Q
    |||||||||||||||||||| |||||| |||||||||   | |||| ||| |||||||| || ||| | ||| ||||| |||||||||| | |  |  ||    
T  36748176 attctcaattcaatatattttactttaaatttatgataaagaataacgcaccaatacttgaaaaagga-actcaaaactatttttctctctatttctttt 36748274  T
Q  419 atacatttttcttaatatatgtgaaat 445  Q
    ||||| |||||||||||| ||||||||    
T  36748275 atacacttttcttaatatgtgtgaaat 36748301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 277
Target Start/End: Original strand, 8385035 - 8385064
Alignment:
Q  248 tatttcacttttcaatacaatattaattac 277  Q
    ||||||||||||||||||||||||||||||    
T  8385035 tatttcacttttcaatacaatattaattac 8385064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 445
Target Start/End: Original strand, 40965090 - 40965167
Alignment:
Q  368 catcaatacttaacaagaatacttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    ||||||||||||||||    ||||||||| |||||||||| ||   || |||||||||||||||||||  ||||||||    
T  40965090 catcaatacttaacaaatgcacttaaaactatttttctctctccttcatttatacatttttcttaatacgtgtgaaat 40965167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 454
Target Start/End: Original strand, 44736991 - 44737028
Alignment:
Q  417 ttatacatttttcttaatatatgtgaaataagcaaatg 454  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  44736991 ttatacatttttcttaatatgtgtgaaatgagcaaatg 44737028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 248 - 276
Target Start/End: Complemental strand, 435232 - 435204
Alignment:
Q  248 tatttcacttttcaatacaatattaatta 276  Q
    |||||||||||||||||||||||||||||    
T  435232 tatttcacttttcaatacaatattaatta 435204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Original strand, 3100360 - 3100388
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  3100360 atttcacttttcaatacaatattaattac 3100388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Original strand, 7213435 - 7213463
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  7213435 atttcacttttcaatacaatattaattac 7213463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Original strand, 9724841 - 9724869
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  9724841 atttcacttttcaatacaatattaattac 9724869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Complemental strand, 13375621 - 13375593
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  13375621 atttcacttttcaatacaatattaattac 13375593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 356
Target Start/End: Complemental strand, 14384389 - 14384321
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    ||||||||| | |||| |||| ||||||  | | |||||||||||||||||  ||||||||||||||||    
T  14384389 caattataattctaattaatactactttcttcactctcaattcaatatattatactttacatttatgat 14384321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Complemental strand, 15859489 - 15859461
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  15859489 atttcacttttcaatacaatattaattac 15859461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 248 - 276
Target Start/End: Complemental strand, 17154404 - 17154376
Alignment:
Q  248 tatttcacttttcaatacaatattaatta 276  Q
    |||||||||||||||||||||||||||||    
T  17154404 tatttcacttttcaatacaatattaatta 17154376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Original strand, 19009805 - 19009833
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  19009805 atttcacttttcaatacaatattaattac 19009833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 356
Target Start/End: Original strand, 26273755 - 26273823
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    ||||||||| |||||| |||| |||||| || | || ||||||||||||||  ||||| ||||||||||    
T  26273755 caattataaatttaattaatactactttcatcactcccaattcaatatattctactttgcatttatgat 26273823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Original strand, 28572171 - 28572199
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  28572171 atttcacttttcaatacaatattaattac 28572199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 336
Target Start/End: Complemental strand, 33275809 - 33275761
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatata 336  Q
    ||||||||| |||||| ||||||||||| || |||| ||||||||||||    
T  33275809 caattataattttaattaatattactttcatcattcccaattcaatata 33275761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Original strand, 41436039 - 41436067
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  41436039 atttcacttttcaatacaatattaattac 41436067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Complemental strand, 42881424 - 42881396
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  42881424 atttcacttttcaatacaatattaattac 42881396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Complemental strand, 43427510 - 43427482
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  43427510 atttcacttttcaatacaatattaattac 43427482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Complemental strand, 44534634 - 44534606
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  44534634 atttcacttttcaatacaatattaattac 44534606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 1e-32; HSPs: 82)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 249 - 454
Target Start/End: Complemental strand, 38160301 - 38160097
Alignment:
Q  249 atttcacttttcaatacaatattaattacnnnnnnnnnncaattataactttaatcaatattactttaattattctcaattcaatatatttcactttaca 348  Q
    ||||||||||||||||||||||||||||           ||||||||||| |||| ||||||||||| || | ||||||||||||||||||||||||  |    
T  38160301 atttcacttttcaatacaatattaatta-ttttttttttcaattataactctaattaatattacttttatcactctcaattcaatatatttcactttgta 38160203  T
Q  349 tttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataag 448  Q
    ||||||||  |||| |||||||||||| || ||||  | |||||||||||||||||||| ||    | |||||||||||||||||||||| | |||| ||    
T  38160202 tttatgataatggagaatgcatcaatatttgacaaagacacttaaaacaatttttctctctcctttatttatacatttttcttaatatatataaaatgag 38160103  T
Q  449 caaatg 454  Q
    ||||||    
T  38160102 caaatg 38160097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 288 - 462
Target Start/End: Complemental strand, 22872499 - 22872323
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaa--ga 385  Q
    ||||||||||| |||| ||||||||||| || | ||||||||||||||||| |||||| ||||||||||  |||| |||||| |||||||| ||||  ||    
T  22872499 caattataactctaattaatattactttcatcactctcaattcaatatattccactttgcatttatgataatggagaatgcaccaatacttgacaaacga 22872400  T
Q  386 atacttaaaacaatttttctct-ttctcccagttatacatttttcttaatatatgtgaaataagcaaatggttcactt 462  Q
      ||||||||| |||||||||| ||||  || |||||||||||||||||||| |||||||| ||||||||| ||||||    
T  22872399 gcacttaaaaccatttttctctcttct-tcacttatacatttttcttaatatgtgtgaaatgagcaaatggctcactt 22872323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 292 - 455
Target Start/End: Complemental strand, 4360515 - 4360352
Alignment:
Q  292 tataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatactt 391  Q
    ||||||| |||| |||| |||||| || |||| |||||||||||||| |||||| |||||||| | ||||| |||||| ||||||||||||| |  ||||    
T  4360515 tataactctaattaatactactttcatcattcacaattcaatatattccactttgcatttatgctagtggagaatgcaccaatacttaacaaaagcactt 4360416  T
Q  392 aaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaatgg 455  Q
    ||||| |||||||||||||   || |||||| ||||||||||||| |||||||| | |||||||    
T  4360415 aaaaccatttttctctttcattcatttatacttttttcttaatatgtgtgaaatgaacaaatgg 4360352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 291 - 451
Target Start/End: Original strand, 37309697 - 37309857
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| ||||||||||| || | |||||||||||||||||| ||||| |||||||||| || || ||||||||||||||||||||||| | |    
T  37309697 ttataactctaattaatattactttcatcactctcaattcaatatatttaactttgcatttatgatagtagagaatgcatcaatacttaacaagaacaat 37309796  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaa 451  Q
    ||||   |||||||||| ||    | |||| ||||||||||||||||| |||||| |||||    
T  37309797 taaagtcatttttctctctcatttatttatgcatttttcttaatatatatgaaatgagcaa 37309857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 325 - 455
Target Start/End: Original strand, 8295062 - 8295192
Alignment:
Q  325 caattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttatacat 424  Q
    ||||||||||||||  || || |||||||||| ||||| |||||| ||||||||| |||||  |||||||||||||||||||| |||  || ||||||||    
T  8295062 caattcaatatattatacattgcatttatgatagtggagaatgcaccaatacttatcaagaggacttaaaacaatttttctctctctttcatttatacat 8295161  T
Q  425 ttttcttaatatatgtgaaataagcaaatgg 455  Q
    |||||||||| | |||||||| |||||||||    
T  8295162 ttttcttaatttgtgtgaaatgagcaaatgg 8295192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 291 - 449
Target Start/End: Original strand, 39979779 - 39979937
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| ||||||||||| || |||  |||||||||||||| ||||||||||||||||| ||||| |||||| | ||||||||||||   |||    
T  39979779 ttataactctaattaatattactttcatcatttccaattcaatatattccactttacatttatgatagtggagaatgcaccgatacttaacaagtgcact 39979878  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagc 449  Q
    |||||| |||||||| | |    || |||||||||||||||||||  ||||||||||||    
T  39979879 taaaactatttttctttctacttcatttatacatttttcttaatacgtgtgaaataagc 39979937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 291 - 447
Target Start/End: Complemental strand, 18849867 - 18849711
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| ||||||||||| |  | |  ||||||||||||||||||||| |||||||||| ||||| |||||| |||||||||||||||  |||    
T  18849867 ttataactctaattaatattactttcacaacttccaattcaatatatttcactttgcatttatgatagtggagaatgcaccaatacttaacaagagcact 18849768  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataa 447  Q
    |||||| || ||||| | ||   || |||||||||| ||||||||| ||||||||||    
T  18849767 taaaaccatatttctttctccttcatttatacatttgtcttaatatgtgtgaaataa 18849711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 226 - 444
Target Start/End: Original strand, 41436418 - 41436633
Alignment:
Q  226 tattgtcctaaaattacttacatatttcacttttcaatacaatattaattacnnnnnnnnnncaattataactttaatcaatattactttaattattctc 325  Q
    |||||||||||||| ||  ||  ||||||||||||||||||||||||||||            |||||||||| |||| |||| |||||| || |||| |    
T  41436418 tattgtcctaaaataaccgaccaatttcacttttcaatacaatattaattatttttttct---aattataactctaattaatactactttcatcattcgc 41436514  T
Q  326 aattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttatacatt 425  Q
    ||||||| |||||  ||||| |||||||||| ||||| |||||| |||||| |||||| |  ||||||||| |||||| ||| |||| || ||||||| |    
T  41436515 aattcaaaatattctactttgcatttatgatagtggagaatgcaccaatacataacaaaagcacttaaaaccatttttttctctctctcacttatacact 41436614  T
Q  426 tttcttaatatatgtgaaa 444  Q
    ||||||||||| |||||||    
T  41436615 tttcttaatatgtgtgaaa 41436633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 291 - 445
Target Start/End: Original strand, 49812228 - 49812382
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| |||| || ||| ||  ||| |||| ||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||   |||    
T  49812228 ttataactctaattaatactattttcatctttcccaatacaatatattccactttacatttatgatagtggataatgcaccaatacttaacaagtgcact 49812327  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    |||||| |||||| ||| ||   || ||||| ||||||||||||| |||||||||    
T  49812328 taaaactatttttttctctccttcatttataaatttttcttaatacatgtgaaat 49812382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 288 - 452
Target Start/End: Complemental strand, 52677142 - 52676978
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaat 387  Q
    ||||||||| | || |||||| |||||| || | |||||||| ||||||||| ||||||||||||||||  ||   |||||||||||||||| |||||      
T  52677142 caattataattgtattcaatagtactttcatcactctcaatttaatatattttactttacatttatgataatgataaatgcatcaatacttatcaagagc 52677043  T
Q  388 acttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaa 452  Q
    ||||||||  |||||||||||||   || | ||||||||||||||||| || |||||| ||||||    
T  52677042 acttaaaatcatttttctctttcattcactaatacatttttcttaataaatatgaaatgagcaaa 52676978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 289 - 436
Target Start/End: Original strand, 49448838 - 49448985
Alignment:
Q  289 aattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaata 388  Q
    |||||||||| |||| |||| |||||| || |||||||||||||||||||  ||||| ||||||||||  | || ||||||  ||||||| ||||||  |    
T  49448838 aattataactctaattaatactactttcatcattctcaattcaatatattatactttgcatttatgataatagagaatgcacaaatacttgacaagagca 49448937  T
Q  389 cttaaaacaatttttctctttctcccagttatacatttttcttaatat 436  Q
    |||||||| |||||||||| ||   || ||||||||||||||||||||    
T  49448938 cttaaaaccatttttctctctccttcacttatacatttttcttaatat 49448985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 300 - 467
Target Start/End: Original strand, 30568667 - 30568838
Alignment:
Q  300 taatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatc----aatacttaacaagaatacttaaaa 395  Q
    |||| ||||||| ||| || | |||||||||||||||||||||||| |||||||||| |  || |||| ||     |||||||||||| || ||||||||    
T  30568667 taattaatattattttcatcactctcaattcaatatatttcactttgcatttatgatagcagagaatgaatgcactaatacttaacaataacacttaaaa 30568766  T
Q  396 caatttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaatggttcacttcatcc 467  Q
    | |||||||||||||   |  |||||||||||||||||||||| ||||||||| |||||  |||||| ||||    
T  30568767 ccatttttctctttccttcctttatacatttttcttaatatatatgaaataagtaaatgactcacttaatcc 30568838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 323 - 449
Target Start/End: Complemental strand, 54729560 - 54729430
Alignment:
Q  323 ctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttatac 422  Q
    |||||||||||||||| |||||| |||||||||| ||||| ||| ||  |||||||||||| || ||||||||| |||||||||| |||  || ||||||    
T  54729560 ctcaattcaatatattccactttgcatttatgatagtggagaatacactaatacttaacaaaaacacttaaaactatttttctctctctttcatttatac 54729461  T
Q  423 atttt----tcttaatatatgtgaaataagc 449  Q
    |||||    ||||||||| ||||||||||||    
T  54729460 atttttctttcttaatatgtgtgaaataagc 54729430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 291 - 407
Target Start/End: Complemental strand, 26799324 - 26799208
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| |||| |||||| || |||||||||||||||||||  | ||| |||||||||| ||||| ||| ||||||||||||| ||||| |||    
T  26799324 ttataactctaattaatagtactttcatcattctcaattcaatatattctattttgcatttatgatagtggaaaatacatcaatacttaaaaagaacact 26799225  T
Q  391 taaaacaatttttctct 407  Q
    |||| | ||||||||||    
T  26799224 taaatctatttttctct 26799208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 291 - 447
Target Start/End: Original strand, 3686010 - 3686168
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| ||||||||||| || | |||||||||||||||||  ||||| ||||||| || ||||| |||||| ||||||||||||| | ||||    
T  3686010 ttataactctaattaatattactttcatcactctcaattcaatatattcaactttgcatttataatagtggagaatgcaccaatacttaacaaaagtact 3686109  T
Q  391 taaaacaatttttctctttctcc--cagttatacatttttcttaatatatgtgaaataa 447  Q
    ||||||  |||||  || |||||  || ||||| ||||| |||||||| ||| ||||||    
T  3686110 taaaacttttttttcctatctccttcatttatatattttccttaatatgtgtaaaataa 3686168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 291 - 454
Target Start/End: Original strand, 41203736 - 41203899
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| |||| |||||| || | | ||||||||||||||| ||||||  ||||||| | ||| | ||||||||||||||||||||||  |||    
T  41203736 ttataactctaattaatactacttttatcactttcaattcaatatattccactttgtatttatggtagtgaagaatgcatcaatacttaacaagagcact 41203835  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaatg 454  Q
     ||||| |||||||| | ||   || |||||||||||||||||||  |||||||  ||||||||    
T  41203836 aaaaaccatttttctatctccttcatttatacatttttcttaatacgtgtgaaacgagcaaatg 41203899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 290 - 404
Target Start/End: Original strand, 27977145 - 27977259
Alignment:
Q  290 attataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatac 389  Q
    ||||||||| |||| ||||| ||||| || | ||||||||||||||||| |||||| ||||||| || ||||| |||||| ||||||||||||| || ||    
T  27977145 attataactctaattaatatcactttcatcactctcaattcaatatattccactttgcatttataatagtggagaatgcaccaatacttaacaaaaacac 27977244  T
Q  390 ttaaaacaatttttc 404  Q
    ||||||  |||||||    
T  27977245 ttaaaatcatttttc 27977259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 331 - 445
Target Start/End: Complemental strand, 35909641 - 35909527
Alignment:
Q  331 aatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttatacatttttct 430  Q
    ||||||||||||||||||||||| || ||||| |||||| |||||||||||||  | ||||||||  |||||| ||||||   || ||||||||||||||    
T  35909641 aatatatttcactttacatttataatagtggaaaatgcaccaatacttaacaaatacacttaaaattatttttatctttcattcatttatacatttttct 35909542  T
Q  431 taatatatgtgaaat 445  Q
    |||||  ||||||||    
T  35909541 taatacgtgtgaaat 35909527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 291 - 435
Target Start/End: Original strand, 38976990 - 38977135
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtgga-taatgcatcaatacttaacaagaatac 389  Q
    |||||||| |||| |||| |||||| || ||| ||||||||||||||| ||||||||||||||||| | |||  |||||| |||||||||| |||   ||    
T  38976990 ttataactctaattaatactactttcatcattttcaattcaatatattccactttacatttatgataggggagaaatgcaccaatacttaagaagtgcac 38977089  T
Q  390 ttaaaacaatttttctct-ttctcccagttatacatttttcttaata 435  Q
    ||||||| |||||||||| ||||  || |||||||||||||||||||    
T  38977090 ttaaaactatttttctctcttct-tcatttatacatttttcttaata 38977135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 226 - 451
Target Start/End: Complemental strand, 43335193 - 43334971
Alignment:
Q  226 tattgtcctaaaattacttacatatttcacttttcaatacaatattaattacnnnnnnnnnncaattataactttaatcaatattactttaattattctc 325  Q
    |||||| ||||||| ||| |  ||||||||||||||||||||||||||||||          ||||||| ||| |||| |||| ||||||  | | ||||    
T  43335193 tattgttctaaaataactgatttatttcacttttcaatacaatattaattactttttat---caattatgactataattaatactactttcttcactctc 43335097  T
Q  326 aattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttatacatt 425  Q
    ||||||||||||| |||||| ||||||  ||  |||| ||||||  |||| || ||||||| ||||||||  |||||||| || |   || |||||||||    
T  43335096 aattcaatatattccactttccatttaaaataatggagaatgcactaatatttgacaagaacacttaaaattatttttctattacattcatttatacatt 43334997  T
Q  426 tttcttaatatatgtgaaataagcaa 451  Q
    ||||||||||| |||||||| |||||    
T  43334996 tttcttaatatgtgtgaaatgagcaa 43334971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 291 - 445
Target Start/End: Complemental strand, 1825356 - 1825200
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcat--caatacttaacaagaata 388  Q
    |||||||| |||| ||||||| ||| || ||| ||||||||||||||| ||||||||||||||||  || || |||||||   |||||||||||||   |    
T  1825356 ttataactctaattaatattattttcatcattttcaattcaatatattccactttacatttatgaaagttgagaatgcatactaatacttaacaagtgca 1825257  T
Q  389 cttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    |||||||| |||||||| | ||    | |||||||||||||||||||| ||||||||    
T  1825256 cttaaaactatttttctatctcctttatttatacatttttcttaatatgtgtgaaat 1825200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 305 - 454
Target Start/End: Original strand, 28974319 - 28974468
Alignment:
Q  305 aatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttc 404  Q
    |||| |||||| || | ||||| ||||||||||| | |||| ||||||||||  |||| |||||| ||||||||||||| || ||||||||| | ||||     
T  28974319 aatactactttcatcactctcatttcaatatattcccctttgcatttatgataatggagaatgcaccaatacttaacaacaacacttaaaaccactttta 28974418  T
Q  405 tctttctcccagttatacatttttcttaatatatgtgaaataagcaaatg 454  Q
    |||  ||  || |||||||||| ||||||||| |||||||||| ||||||    
T  28974419 tctccctttcatttatacatttgtcttaatatgtgtgaaataaacaaatg 28974468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 291 - 436
Target Start/End: Complemental strand, 42185904 - 42185759
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| |||| |||||| || | ||||||||||||||||||||| ||  ||||||||| |||||||||  | |||||||||||||||  |||    
T  42185904 ttataactctaattaatactactttcatcactctcaattcaatatatttcaccttgtatttatgatagtggataatagaccaatacttaacaagagcact 42185805  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatat 436  Q
    |||||  |||||||| | ||   || |||||||||| |||||||||    
T  42185804 taaaatcatttttctatctccttcatttatacatttgtcttaatat 42185759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 291 - 455
Target Start/End: Complemental strand, 41710252 - 41710088
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| ||||||||||| || | || |||||||||||||| |||||| |||||||||| ||||| |||  | ||||| |||||||||  |||    
T  41710252 ttataactctaattaatattactttcatcactcccaattcaatatattccactttgcatttatgatagtggaaaatagaccaataattaacaagagcact 41710153  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaatgg 455  Q
    |||||| |||||| ||| |    || |||||||||| ||||||||| |||||  | |||||||||    
T  41710152 taaaaccatttttttctctgcttcatttatacatttgtcttaatatgtgtgatttgagcaaatgg 41710088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 291 - 455
Target Start/End: Complemental strand, 42024309 - 42024145
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| |||| |||||| || | |  |||||||||||||| |||||| ||||||| || ||||| |||  | ||||||||||||||| || |    
T  42024309 ttataactataattaatactactttcatcacttccaattcaatatattccactttgcatttataatagtggagaatagaccaatacttaacaagagtagt 42024210  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaatgg 455  Q
    |||||| |||||||||| ||   || |||||||||| ||||||||| |||||  | |||||||||    
T  42024209 taaaaccatttttctctctccttcatttatacatttgtcttaatatgtgtgatttgagcaaatgg 42024145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 291 - 442
Target Start/End: Original strand, 49306586 - 49306737
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| |||| |||||| || | ||  ||||||||||||| |||||| |||||||||| | ||| |||  | |||||||||||||||  |||    
T  49306586 ttataactctaattaatactactttcatcactcctaattcaatatattccactttgcatttatgataggggagaatagaccaatacttaacaagagcact 49306685  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtga 442  Q
    |||||| |||||||||| |||  || |||||||||| |||||| || |||||    
T  49306686 taaaaccatttttctctctctttcatttatacatttgtcttaaaatgtgtga 49306737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 311 - 402
Target Start/End: Complemental strand, 50328159 - 50328068
Alignment:
Q  311 actttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttt 402  Q
    ||||| || |||||||||||||||||||||||||| |||||||||| ||||  |||||| |||||||| ||||| | ||||||||| |||||    
T  50328159 acttttatcattctcaattcaatatatttcactttgcatttatgatagtggtgaatgcaccaatacttgacaagtacacttaaaaccatttt 50328068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 288 - 454
Target Start/End: Original strand, 17237039 - 17237205
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaat 387  Q
    ||||||||||| |||| |||| |||||| ||   | ||||||||||||||| |||||| |||||||||| ||  | ||| ||  |||||||||||| |      
T  17237039 caattataactctaattaatactactttcatcgctttcaattcaatatattccactttgcatttatgatagtaaagaatccactaatacttaacaaaatc 17237138  T
Q  388 acttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaatg 454  Q
    ||||||||| |||||||||| ||   || ||||| |||||||||||||  |||||||| ||||||||    
T  17237139 acttaaaactatttttctctctccttcatttatatatttttcttaataggtgtgaaatgagcaaatg 17237205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 291 - 376
Target Start/End: Original strand, 48740519 - 48740604
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatac 376  Q
    |||||||| |||| ||||||||||| || ||| | ||||||||||||| ||||||||||||||||| ||||| |||||| ||||||    
T  48740519 ttataactctaattaatattacttttatcatttttaattcaatatattccactttacatttatgatagtggagaatgcaccaatac 48740604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 291 - 454
Target Start/End: Complemental strand, 39258380 - 39258215
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaata---cttaacaagaat 387  Q
    ||||||||||||| |||| |||||| || | |||||||| |||||||| || |||||||||||||| ||  | ||||||  ||||   ||||||||||      
T  39258380 ttataactttaattaataatactttcatcactctcaatttaatatattccattttacatttatgatagtaaagaatgcacgaatagtgcttaacaagagc 39258281  T
Q  388 acttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaatg 454  Q
    ||||||||  | |||||||| ||   || |||||||||||| ||||||| |||||||||||||||||    
T  39258280 acttaaaatca-ttttctctctcattcacttatacattttttttaatatgtgtgaaataagcaaatg 39258215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 291 - 379
Target Start/End: Complemental strand, 44020870 - 44020782
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatactta 379  Q
    |||||||| ||||||||| |||||| || |||   |||||||||| || ||||||||||||||||| |||||||||||| |||||||||    
T  44020870 ttataactctaatcaatactactttcatcatttctaattcaatatgttccactttacatttatgatagtggataatgcaccaatactta 44020782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 291 - 375
Target Start/End: Original strand, 51527418 - 51527501
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaata 375  Q
    |||||||| |||| ||||||| ||| || ||| ||||||||||||||||||||||||||||||||| ||||| |||||| |||||    
T  51527418 ttataactctaattaatatta-tttcatcattttcaattcaatatatttcactttacatttatgatagtggagaatgcaccaata 51527501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 249 - 356
Target Start/End: Complemental strand, 55360497 - 55360391
Alignment:
Q  249 atttcacttttcaatacaatattaattacnnnnnnnnnncaattataactttaatcaatattactttaattattctcaattcaatatatttcactttaca 348  Q
    |||||||||||||||||||||||||||||          ||||||||||| |||| ||||||||||| || | |||||||||||||||||  ||||||||    
T  55360497 atttcacttttcaatacaatattaattacttttttttt-caattataactctaattaatattactttcatcactctcaattcaatatattgtactttaca 55360399  T
Q  349 tttatgat 356  Q
    ||||||||    
T  55360398 tttatgat 55360391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 18509877 - 18509956
Alignment:
Q  328 ttcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctct 407  Q
    ||||||||||| ||||||  ||||||| | || ||||||||| |||||||||||||||||||||||||  ||||||||||    
T  18509877 ttcaatatattccactttgtatttatgttagtagataatgcaccaatacttaacaagaatacttaaaaatatttttctct 18509956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 289 - 356
Target Start/End: Complemental strand, 47277792 - 47277725
Alignment:
Q  289 aattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    |||||||||| |||| |||| ||||||||| | |||||||||||||||||| ||||||||||||||||    
T  47277792 aattataactataattaatactactttaatcactctcaattcaatatattttactttacatttatgat 47277725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 291 - 445
Target Start/End: Complemental strand, 47787955 - 47787801
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| |||| |||||| || ||| ||||||| |||||||| | |||||||||||||| ||| |  |||||||| |||||||||||    ||    
T  47787955 ttataactctaattaatactactttcatcattttcaattccatatattttattttacatttatgatagtgaaggatgcatcagtacttaacaagtgccct 47787856  T
Q  391 taaaacaatttttctct-ttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    |||||| |||||| ||| ||||  || |||||||||||||||||||  ||||||||    
T  47787855 taaaactatttttatctcttct-tcatttatacatttttcttaatacgtgtgaaat 47787801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 325 - 407
Target Start/End: Complemental strand, 9093836 - 9093754
Alignment:
Q  325 caattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctct 407  Q
    ||||| |||||||| ||||||||||||||||| ||||| ||||||  |||||||||||||   ||||||||| ||||||||||    
T  9093836 caatttaatatattccactttacatttatgatagtggagaatgcacaaatacttaacaagtgcacttaaaactatttttctct 9093754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 291 - 412
Target Start/End: Original strand, 42544208 - 42544329
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| ||||||||||| || | || |||||||||||||| |||||| |||||||||| ||||| |||  |  ||||||||||||||  |||    
T  42544208 ttataactctaattaatattacttttatcactcacaattcaatatattccactttgcatttatgatagtggagaatagactaatacttaacaagagcact 42544307  T
Q  391 taaaacaatttttctctttctc 412  Q
    |||||  |||| ||||| ||||    
T  42544308 taaaatcatttctctctctctc 42544329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 291 - 383
Target Start/End: Complemental strand, 14009742 - 14009650
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaa 383  Q
    ||||||||||||| | |||| | || || | |||||||||||||||||||| ||| ||||||| || ||||| ||| ||||||||||||||||    
T  14009742 ttataactttaattagtattgcgttcatcactctcaattcaatatatttcattttgcatttataatagtggagaatacatcaatacttaacaa 14009650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 310 - 454
Target Start/End: Original strand, 50714600 - 50714744
Alignment:
Q  310 tactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctcttt 409  Q
    |||||| || ||||||||||||||||||| ||||||  |||||||||  |||  ||||||  | ||||| ||||||  ||||||||| |||| | ||  |    
T  50714600 tactttcatcattctcaattcaatatattccactttcaatttatgataatggtgaatgcactactacttgacaagagcacttaaaactatttatatccct 50714699  T
Q  410 ctcccagttatacatttttcttaatatatgtgaaataagcaaatg 454  Q
    ||  || ||||| |||||||||||||||| |||||||| ||||||    
T  50714700 ctttcacttataaatttttcttaatatatatgaaataaacaaatg 50714744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 322 - 453
Target Start/End: Original strand, 34021067 - 34021198
Alignment:
Q  322 tctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttata 421  Q
    |||||||||||||||||  ||||| |||||||||| || || |||||| ||||||  |||||||| ||| ||||  |||||||||| ||    | |||||    
T  34021067 tctcaattcaatatattagactttgcatttatgatagtagagaatgcaccaataccgaacaagaacactgaaaattatttttctctctcctttatttata 34021166  T
Q  422 catttttcttaatatatgtgaaataagcaaat 453  Q
    ||||| ||| ||||| |||||||| |||||||    
T  34021167 catttgtctcaatatgtgtgaaatgagcaaat 34021198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 291 - 369
Target Start/End: Original strand, 29644354 - 29644432
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgca 369  Q
    |||||||| |||| |||| |||||| || |||||||||||||||||||  |||||||||||||||| || || ||||||    
T  29644354 ttataactataattaatactactttcatcattctcaattcaatatattctactttacatttatgatagtagagaatgca 29644432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 249 - 449
Target Start/End: Original strand, 38319871 - 38320069
Alignment:
Q  249 atttcacttttcaatacaatattaattacnnnnnnnnnncaattataactttaatcaatattactttaattattctcaattcaatatatttcactttaca 348  Q
    |||||||||||||||||||||||||||||          ||||||||||  |||| |||| |||||| || | |||||||||||||||||  ||||| ||    
T  38319871 atttcacttttcaatacaatattaattac---ttttttccaattataacactaattaatactactttcatcactctcaattcaatatattctactttgca 38319967  T
Q  349 tttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttataca-tttttcttaatatatgtgaaataa 447  Q
    ||||||||   | | |||||| ||||| || | |||   ||| ||| | |||||||||| |||  || ||||||| |||||||||||| |||||||||||    
T  38319968 tttatgataaagaagaatgcaccaatagttgataagggcactcaaacccatttttctctctctttcacttatacactttttcttaataaatgtgaaataa 38320067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 226 - 381
Target Start/End: Complemental strand, 51572397 - 51572246
Alignment:
Q  226 tattgtcctaaaattacttacatatttcacttttcaatacaatattaattacnnnnnnnnnncaattataactttaatcaatattactttaattattctc 325  Q
    |||||||||||||| | | || ||||||||||||||||||||||||||||             |||||||||| |||| |||| |||||| || | |  |    
T  51572397 tattgtcctaaaataattgacttatttcacttttcaatacaatattaatt----tttttttttaattataactctaattaatactacttttatcacttcc 51572302  T
Q  326 aattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaac 381  Q
    ||||||||||||| ||||||||||||||||| || || |||||| |||||| ||||    
T  51572301 aattcaatatattacactttacatttatgatagtagaaaatgcaccaatacataac 51572246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 227 - 276
Target Start/End: Complemental strand, 3503224 - 3503175
Alignment:
Q  227 attgtcctaaaattacttacatatttcacttttcaatacaatattaatta 276  Q
    ||||||||||||| | ||| ||||||||||||||||||||||||||||||    
T  3503224 attgtcctaaaataatttatatatttcacttttcaatacaatattaatta 3503175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 321 - 442
Target Start/End: Original strand, 26185211 - 26185332
Alignment:
Q  321 ttctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttat 420  Q
    |||||||| ||| ||||| ||| || |||||||||| ||||| |||  | ||||||||||||||| || ||||||| |||||||||| ||   || ||||    
T  26185211 ttctcaatgcaacatattccacgttgcatttatgatagtggagaatagaccaatacttaacaagagtatttaaaaccatttttctctctccttcatttat 26185310  T
Q  421 acatttttcttaatatatgtga 442  Q
    |||||| |||| |||| |||||    
T  26185311 acatttgtcttgatatgtgtga 26185332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 353
Target Start/End: Complemental strand, 11583981 - 11583917
Alignment:
Q  289 aattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttat 353  Q
    ||||||||| ||||| ||||||||||| || | |||||||| ||||||||| |||||||||||||    
T  11583981 aattataacattaattaatattactttcatcactctcaatttaatatattttactttacatttat 11583917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 328 - 403
Target Start/End: Original strand, 8065569 - 8065644
Alignment:
Q  328 ttcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaattttt 403  Q
    ||||||||||  ||||||||||||||||| || || |||||| ||||||||||||||   ||||||||| ||||||    
T  8065569 ttcaatatataccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattttt 8065644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 325 - 455
Target Start/End: Original strand, 33047525 - 33047655
Alignment:
Q  325 caattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctct-ttctcccagttataca 423  Q
    |||||||||||||| ||||||  ||||||||| ||||| |||  | ||||||||||||| |  ||||||||| |||||||||| ||||     |||||||    
T  33047525 caattcaatatattccactttgtatttatgatagtggagaatctaccaatacttaacaaaagcacttaaaaccatttttctctcttct-ttgtttataca 33047623  T
Q  424 tttttcttaatatatgtgaaataagcaaatgg 455  Q
    ||||||||||||  |||||||| ||| |||||    
T  33047624 tttttcttaataggtgtgaaatgagctaatgg 33047655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 305 - 396
Target Start/End: Complemental strand, 39976484 - 39976393
Alignment:
Q  305 aatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaac 396  Q
    |||| |||||| || | ||||||||||||||||| |||||| ||||| | |  ||||| |||||| |||||||||||||||  |||||||||    
T  39976484 aatactactttcatcactctcaattcaatatattccactttgcatttctaacagtggagaatgcaccaatacttaacaagagcacttaaaac 39976393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 407
Target Start/End: Complemental strand, 283551 - 283469
Alignment:
Q  325 caattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctct 407  Q
    |||||| ||||||| ||||||  |||| | || ||||| ||||||  ||||||||||||||  ||||||||||||||||||||    
T  283551 caattctatatattccactttgaatttctaatagtggagaatgcacaaatacttaacaagagcacttaaaacaatttttctct 283469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 288 - 441
Target Start/End: Complemental strand, 10309366 - 10309213
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaat 387  Q
    |||||||||  ||||| ||||||||||| |||  |||||||||||||||||| | ||| ||||||||||   | | ||| || ||||| |||| ||| |     
T  10309366 caattataatcttaattaatattactttcatttatctcaattcaatatattttattttgcatttatgataccgcagaatacaccaatatttaagaag-ac 10309268  T
Q  388 acttaaaacaatttttctctttctcccagttataca-tttttcttaatatatgtg 441  Q
    ||||||||  ||||||||||||||   | ||||||| ||||||||| ||||||||    
T  10309267 acttaaaattatttttctctttctttaatttatacactttttcttattatatgtg 10309213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 409
Target Start/End: Complemental strand, 40881256 - 40881182
Alignment:
Q  335 tatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctcttt 409  Q
    |||| ||||||||||||||||| ||||| ||| |||||||| |||||||   || ||||||| ||||||||||||    
T  40881256 tattccactttacatttatgatagtggagaatacatcaatatttaacaaatgtaattaaaactatttttctcttt 40881182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 292 - 445
Target Start/End: Complemental strand, 16493403 - 16493252
Alignment:
Q  292 tataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatactt 391  Q
    ||||||| |||| ||||||||||| || | |  |||||||||||||| |||||| || ||||||| |  || ||||||  ||||||| |||| || ||||    
T  16493403 tataactctaattaatattactttcataacttccaattcaatatattccactttgca-ttatgatagctgagaatgcacaaatactt-acaaaaacactt 16493306  T
Q  392 aaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    ||||| |||||| ||| |||   | |||||||||| ||||||||| ||||||||    
T  16493305 aaaaccatttttttctctcttttatttatacatttatcttaatatgtgtgaaat 16493252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 417 - 462
Target Start/End: Complemental strand, 27790403 - 27790358
Alignment:
Q  417 ttatacatttttcttaatatatgtgaaataagcaaatggttcactt 462  Q
    |||||||||||||||||||| |||||||| | ||||||||||||||    
T  27790403 ttatacatttttcttaatatgtgtgaaatgaacaaatggttcactt 27790358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 288 - 445
Target Start/End: Complemental strand, 29550838 - 29550681
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaat 387  Q
    ||||||||||| |||| |||| |||||| |  | || ||||||||||||||  ||||||||||||||||   | || |  ||||||||||||| ||        
T  29550838 caattataactctaattaatactactttcacaactcccaattcaatatattctactttacatttatgataaagaatgaaacatcaatacttaaaaaaggc 29550739  T
Q  388 acttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    ||| ||||| |||||||||| |||  |  |||||||||||||||||| | ||||||||    
T  29550738 actcaaaactatttttctctctctttcctttatacatttttcttaatctgtgtgaaat 29550681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 356
Target Start/End: Complemental strand, 35998225 - 35998160
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    |||||||| |||| |||| |||||| |  | |||||||||||||||||| ||||||||||||||||    
T  35998225 ttataactctaattaatactactttcaccactctcaattcaatatattttactttacatttatgat 35998160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 356
Target Start/End: Original strand, 3505718 - 3505786
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    ||||||||||| |||| |||  |||||| | || |||||||||||||||||  ||||||||||||||||    
T  3505718 caattataactctaattaatcatactttcactaatctcaattcaatatattctactttacatttatgat 3505786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 249 - 356
Target Start/End: Complemental strand, 36047248 - 36047143
Alignment:
Q  249 atttcacttttcaatacaatattaattacnnnnnnnnnncaattataactttaatcaatattactttaattattctcaattcaatatatttcactttaca 348  Q
    |||||||||||||||||||||||||||||          ||| |||||| ||||| ||||||||||| |  | |||||||||||||||||  ||||| ||    
T  36047248 atttcacttttcaatacaatattaattactttttttc--caactataacattaattaatattactttcaccactctcaattcaatatattctactttgca 36047151  T
Q  349 tttatgat 356  Q
    ||||||||    
T  36047150 tttatgat 36047143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 249 - 356
Target Start/End: Complemental strand, 49218930 - 49218825
Alignment:
Q  249 atttcacttttcaatacaatattaattacnnnnnnnnnncaattataactttaatcaatattactttaattattctcaattcaatatatttcactttaca 348  Q
    |||||||||||||||||||||||||||||          |||||||||| ||||| ||||||||||| |  | |||||||||||||||||  |||||  |    
T  49218930 atttcacttttcaatacaatattaattactttttttt--caattataacattaattaatattactttcaccactctcaattcaatatattatactttgaa 49218833  T
Q  349 tttatgat 356  Q
    ||||||||    
T  49218832 tttatgat 49218825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 406
Target Start/End: Original strand, 31862828 - 31862903
Alignment:
Q  331 aatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctc 406  Q
    |||||||| |||||| ||| |||||| ||| | | ||||||||||||||||||||  | ||||||| |||||||||    
T  31862828 aatatattccactttgcatctatgatagtgaagagtgcatcaatacttaacaagagaaattaaaaccatttttctc 31862903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 356
Target Start/End: Original strand, 40293684 - 40293751
Alignment:
Q  289 aattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    |||||||||| |||| |||| |||||| || |||||||||| ||||  |||||||||||||| |||||    
T  40293684 aattataactctaataaatactacttttatcattctcaatttaatacttttcactttacattgatgat 40293751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 356
Target Start/End: Original strand, 47846896 - 47846963
Alignment:
Q  289 aattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    |||||||||| |||| |||| |||||| || | ||  |||||||||||||||||||| ||||||||||    
T  47846896 aattataactctaattaatactactttcatcactcctaattcaatatatttcactttgcatttatgat 47846963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 291 - 445
Target Start/End: Original strand, 4357567 - 4357720
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| |||| || ||| || | || |||||||||||||||   |||  ||||||||| ||| | ||| || ||||||||||||| || |||    
T  4357567 ttataactctaattaatactattttcatcactcccaattcaatatattttt-tttgtatttatgatagtgaagaatccaccaatacttaacaaaaacact 4357665  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    |||||  || ||||||| ||   || ||||| |||||||||||||||| ||||||    
T  4357666 taaaatcatctttctctctccttcatttatatatttttcttaatatatatgaaat 4357720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 347
Target Start/End: Original strand, 32323661 - 32323719
Alignment:
Q  289 aattataactttaatcaatattactttaattattctcaattcaatatatttcactttac 347  Q
    ||||||||||| ||| ||||||| |||||| | |||||||||||||||||  |||||||    
T  32323661 aattataacttcaatgaatattattttaatcactctcaattcaatatattatactttac 32323719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 277
Target Start/End: Complemental strand, 388568 - 388539
Alignment:
Q  248 tatttcacttttcaatacaatattaattac 277  Q
    ||||||||||||||||||||||||||||||    
T  388568 tatttcacttttcaatacaatattaattac 388539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 277
Target Start/End: Complemental strand, 18873100 - 18873071
Alignment:
Q  248 tatttcacttttcaatacaatattaattac 277  Q
    ||||||||||||||||||||||||||||||    
T  18873100 tatttcacttttcaatacaatattaattac 18873071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 277
Target Start/End: Complemental strand, 20964442 - 20964413
Alignment:
Q  248 tatttcacttttcaatacaatattaattac 277  Q
    ||||||||||||||||||||||||||||||    
T  20964442 tatttcacttttcaatacaatattaattac 20964413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 356
Target Start/End: Complemental strand, 39053009 - 39052944
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    |||||||| |||| |||| |||||| |  | |||||||||||||||||  ||||||||||||||||    
T  39053009 ttataactctaattaatactactttcaccactctcaattcaatatattctactttacatttatgat 39052944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 277
Target Start/End: Original strand, 39979739 - 39979768
Alignment:
Q  248 tatttcacttttcaatacaatattaattac 277  Q
    ||||||||||||||||||||||||||||||    
T  39979739 tatttcacttttcaatacaatattaattac 39979768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Original strand, 5291649 - 5291677
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  5291649 atttcacttttcaatacaatattaattac 5291677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Original strand, 8294991 - 8295019
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  8294991 atttcacttttcaatacaatattaattac 8295019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 356
Target Start/End: Complemental strand, 22020621 - 22020553
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    ||||||||||| |||| | || |||||| |  |||||||||||||||||||  ||||| ||||||||||    
T  22020621 caattataactctaattattactactttcaccattctcaattcaatatattctactttgcatttatgat 22020553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 356
Target Start/End: Original strand, 25149447 - 25149515
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    ||||||||||| |||| |||| |||||| |  | |  |||||||||||||| |||||||||||||||||    
T  25149447 caattataactctaattaatactactttcacaacttccaattcaatatattccactttacatttatgat 25149515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Original strand, 28330752 - 28330780
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  28330752 atttcacttttcaatacaatattaattac 28330780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 248 - 276
Target Start/End: Original strand, 32323623 - 32323651
Alignment:
Q  248 tatttcacttttcaatacaatattaatta 276  Q
    |||||||||||||||||||||||||||||    
T  32323623 tatttcacttttcaatacaatattaatta 32323651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 356
Target Start/End: Complemental strand, 32949948 - 32949892
Alignment:
Q  300 taatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    |||| ||||||| ||| | || |||||||||||||||||  ||||||||||||||||    
T  32949948 taattaatattattttcactactctcaattcaatatattctactttacatttatgat 32949892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Original strand, 33047458 - 33047486
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  33047458 atttcacttttcaatacaatattaattac 33047486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Complemental strand, 37316069 - 37316041
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  37316069 atttcacttttcaatacaatattaattac 37316041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 418 - 462
Target Start/End: Complemental strand, 40020926 - 40020882
Alignment:
Q  418 tatacatttttcttaatatatgtgaaataagcaaatggttcactt 462  Q
    ||||||||||||||||||| |||||||| | ||||||| ||||||    
T  40020926 tatacatttttcttaatatgtgtgaaatgaccaaatgggtcactt 40020882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Original strand, 47386119 - 47386147
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  47386119 atttcacttttcaatacaatattaattac 47386147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Complemental strand, 48400777 - 48400749
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  48400777 atttcacttttcaatacaatattaattac 48400749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 1e-32; HSPs: 79)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 291 - 454
Target Start/End: Complemental strand, 7785383 - 7785217
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatact--taacaagaata 388  Q
    |||||||| |||| |||| |||||| ||   ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||| || |    
T  7785383 ttataactctaattaatactacttttatcgctctcaattcaatatatttcactttacatttatgatagtggagaatgcatcaatacttataacaataaca 7785284  T
Q  389 cttaaaacaatttttctct-ttctcccagttatacatttttcttaatatatgtgaaataagcaaatg 454  Q
    |||||||| |||||||||| || |  || |||||||||||||||| ||| |||||||| ||||||||    
T  7785283 cttaaaactatttttctctcttatttcatttatacatttttcttagtatgtgtgaaatgagcaaatg 7785217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 291 - 445
Target Start/End: Complemental strand, 50267547 - 50267393
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||| | |||| ||||||||||| || |||| ||||||||||||||||||||||||||||||||  |||| |||||| ||||||||||||||   |||    
T  50267547 ttataattctaattaatattactttcatcattcccaattcaatatatttcactttacatttatgataatggagaatgcaccaatacttaacaagtgcact 50267448  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    |||||| ||||||||||  ||  || |||||||||||||||||||  ||||||||    
T  50267447 taaaactatttttctctcactttcatttatacatttttcttaatacgtgtgaaat 50267393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 291 - 445
Target Start/End: Original strand, 32587764 - 32587918
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| |||| || ||| || | |||||||||||||||||||||||| ||||||||||  |||| |||||||||||||||||||| || |||    
T  32587764 ttataactctaattaataataatttcatcactctcaattcaatatatttcactttgcatttatgataatggaaaatgcatcaatacttaacaaaaacact 32587863  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    |||||  ||||||||||  |   || |||||||||||||||||||| ||||||||    
T  32587864 taaaattatttttctctcaccttcatttatacatttttcttaatatgtgtgaaat 32587918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 291 - 403
Target Start/End: Complemental strand, 48242699 - 48242587
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    ||||||||||||| ||||||||||| || ||||||||||||||||||| ||||||||||||||||| |||||  ||||||||||||||| ||||   |||    
T  48242699 ttataactttaattaatattacttttatcattctcaattcaatatattccactttacatttatgatagtggaggatgcatcaatacttatcaagtgcact 48242600  T
Q  391 taaaacaattttt 403  Q
    |||||| ||||||    
T  48242599 taaaactattttt 48242587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 291 - 445
Target Start/End: Original strand, 42926133 - 42926287
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||| | |||| ||||||| ||| ||| |||| |||||||||||||||| ||| |||||||||| ||||| |||||| | ||||||||||| || |||    
T  42926133 ttataattctaattaatattaatttcattgttctgaattcaatatatttcattttgcatttatgatagtggagaatgcaccgatacttaacaaaaacact 42926232  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    |||||  |||||||||||||   || |||||||||||||||||||| ||| ||||    
T  42926233 taaaatcatttttctctttcattcatttatacatttttcttaatatgtgtcaaat 42926287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 291 - 445
Target Start/End: Complemental strand, 49494272 - 49494118
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    ||||||||||||| ||||||||||| || |||   ||||||||||||| ||||||||||||||||| ||||| |||  | ||||| ||||||||   |||    
T  49494272 ttataactttaattaatattactttcatcatttctaattcaatatattccactttacatttatgatagtggagaattgaccaatatttaacaagtgcact 49494173  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    |||||| |||||||||| |||  || |||||||||||||||||||  ||||||||    
T  49494172 taaaactatttttctctctctttcatttatacatttttcttaatacgtgtgaaat 49494118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 291 - 407
Target Start/End: Complemental strand, 19533028 - 19532912
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    ||||||||||||| |||| |||||| || |||  || ||||||||||||||||||||||||||||| ||||| |||| | |||||||||||||| | |||    
T  19533028 ttataactttaattaatactactttcatcatttacagttcaatatatttcactttacatttatgatagtggagaatgaaccaatacttaacaagtacact 19532929  T
Q  391 taaaacaatttttctct 407  Q
    |||||| ||||||||||    
T  19532928 taaaactatttttctct 19532912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 326 - 452
Target Start/End: Complemental strand, 5040649 - 5040523
Alignment:
Q  326 aattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttatacatt 425  Q
    |||||||||||||||||||  |||||||||| ||||| ||||||||||||||||||||||  || |||||| |||||||||| ||   || |||||||||    
T  5040649 aattcaatatatttcacttcgcatttatgatagtggagaatgcatcaatacttaacaagatcacctaaaaccatttttctctctcattcatttatacatt 5040550  T
Q  426 tttcttaatatatgtgaaataagcaaa 452  Q
    | ||| ||||| |||||||| ||||||    
T  5040549 tgtctaaatatgtgtgaaatgagcaaa 5040523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 291 - 407
Target Start/End: Original strand, 26755975 - 26756091
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| |||| |||||| || ||| ||||||||||||||| ||||||| ||||||||| ||||| |||||||||||||||||||||   |||    
T  26755975 ttataactctaattaatactactttcatcattttcaattcaatatattacactttatatttatgatagtggagaatgcatcaatacttaacaagtgcact 26756074  T
Q  391 taaaacaatttttctct 407  Q
    |||||| ||||| ||||    
T  26756075 taaaactattttcctct 26756091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 291 - 455
Target Start/End: Original strand, 28839338 - 28839502
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| |||| |||||| || | || |||||||||||||| |||||| |||||||||| ||||| |||  | |||||||||||||||  | |    
T  28839338 ttataactataattaatactactttcatcactcccaattcaatatattccactttgcatttatgatagtggagaatagaccaatacttaacaagagcatt 28839437  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaatgg 455  Q
    |||||| |||||||||| ||   || |||||||||| |||||||||||||||  | |||||||||    
T  28839438 taaaactatttttctctctccttcatttatacatttgtcttaatatatgtgatttgagcaaatgg 28839502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 325 - 445
Target Start/End: Complemental strand, 36467270 - 36467150
Alignment:
Q  325 caattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttatacat 424  Q
    ||||||||||||||||||||||||||||| || ||||| ||| || ||||||||||||||   ||||||||| |||||||||| ||   || ||||||||    
T  36467270 caattcaatatatttcactttacatttatcatagtggagaatccaccaatacttaacaagtgcacttaaaactatttttctctctcattcatttatacat 36467171  T
Q  425 ttttcttaatatatgtgaaat 445  Q
    |||||||||||  ||||||||    
T  36467170 ttttcttaatacgtgtgaaat 36467150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 291 - 455
Target Start/End: Complemental strand, 51749292 - 51749128
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| ||||||||||| || | || |||||||||||||| |||||| ||||||||||  |||| |||  | |||||||||||||||| |||    
T  51749292 ttataactctaattaatattactttcatcactcccaattcaatatattccactttgcatttatgataatggagaataaaccaatacttaacaagaacact 51749193  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaatgg 455  Q
    |||||  | |||||||| ||   || |||||||||| |||||||||||||||  | |||||||||    
T  51749192 taaaatcagttttctctctccttcatttatacatttatcttaatatatgtgatttgagcaaatgg 51749128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 248 - 404
Target Start/End: Original strand, 17342787 - 17342940
Alignment:
Q  248 tatttcacttttcaatacaatattaattacnnnnnnnnnncaattataactttaatcaatattactttaattattctcaattcaatatatttcactttac 347  Q
    ||||||||||||||||||||||||||||||            ||||||||| |||| |||| |||||| || | ||||||||||||||||||||||||      
T  17342787 tatttcacttttcaatacaatattaattactattttttc---attataactctaattaatactacttttatcactctcaattcaatatatttcactttgt 17342883  T
Q  348 atttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttc 404  Q
    |||||||||  |||| |||||| ||||||||||||| || ||||||||| |||||||    
T  17342884 atttatgataatggagaatgcaccaatacttaacaaaaacacttaaaaccatttttc 17342940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 291 - 434
Target Start/End: Complemental strand, 28277147 - 28277001
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| ||||  ||||| || ||| |||||||||||||||||||||||||||||||||  |||| |||||| ||||||||||||||   |||    
T  28277147 ttataactctaattaataccactttcatcattttcaattcaatatatttcactttacatttatgatactggagaatgcaccaatacttaacaagtgcact 28277048  T
Q  391 taaaacaatttttctctt-tctcc--cagttatacatttttcttaat 434  Q
    |||||| |||||| | || |||||  || ||||||||||||||||||    
T  28277047 taaaactattttttttttctctccttcatttatacatttttcttaat 28277001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 291 - 445
Target Start/End: Original strand, 5442339 - 5442493
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| ||||||||||| |  | |  |||||||||||||| |||||| |||||||||| ||||| ||||||  ||||||||||||||  |||    
T  5442339 ttataactataattaatattactttcacaacttccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagataact 5442438  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    |||||| |||||||||| ||   || |||||||||| ||||||||  ||||||||    
T  5442439 taaaaccatttttctctctcattcatttatacatttgtcttaataggtgtgaaat 5442493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 300 - 452
Target Start/End: Original strand, 34813925 - 34814077
Alignment:
Q  300 taatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaat 399  Q
    |||| |||| |||||| || |||||||||||||||||||  ||||| ||||||||||  ||   ||||||  ||||||||||||||| ||||||||| ||    
T  34813925 taatgaatactactttcatcattctcaattcaatatattctactttgcatttatgataatgataaatgcactaatacttaacaagaacacttaaaactat 34814024  T
Q  400 ttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaa 452  Q
    |||||||| ||   || | |||||||||||||||||  |||||||| ||||||    
T  34814025 ttttctctctccttcactaatacatttttcttaataagtgtgaaatgagcaaa 34814077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 295 - 445
Target Start/End: Original strand, 43895850 - 43895999
Alignment:
Q  295 aactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaa 394  Q
    |||| |||| ||||||| ||| |||| |||||||||||||||||  ||||| |||||||||| ||||| ||  || ||||||||||||| || || ||||    
T  43895850 aactctaattaatattatttttattactctcaattcaatatattcaactttgcatttatgatagtggagaacacaccaatacttaacaaaaacacataaa 43895949  T
Q  395 acaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    || | |||||||| |||  ||  ||||||||||||||||||| ||||||||    
T  43895950 acta-ttttctctctctttcatctatacatttttcttaatatgtgtgaaat 43895999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 292 - 454
Target Start/End: Original strand, 46536340 - 46536502
Alignment:
Q  292 tataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatactt 391  Q
    ||||||| |||| |||| |||||| || | ||| |||| |||||||| ||||||  ||||||||| ||||| ||| || ||||| |||||||||  ||||    
T  46536340 tataactctaattaatactactttcatcactcttaatttaatatattccactttgtatttatgatagtggagaatacaacaatatttaacaagagcactt 46536439  T
Q  392 aaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaatg 454  Q
    ||||| |||||||||||||   ||  |||| ||||||||||||| ||||||||  ||||||||    
T  46536440 aaaaccatttttctctttccttcatctataaatttttcttaatacatgtgaaacgagcaaatg 46536502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 291 - 442
Target Start/End: Complemental strand, 45889357 - 45889205
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| |||| |||||| || ||||  ||||||||||||| |||||| ||||||||||  |||| |||  | ||||| |||||||||  |||    
T  45889357 ttataactctaattaatactactttcatcattcataattcaatatattccactttgcatttatgataatggagaatagaccaatagttaacaagagcact 45889258  T
Q  391 taaaacaatttttctct-ttctcccagttatacatttttcttaatatatgtga 442  Q
    |||||| |||||||||| | ||  || |||||||||| |||||||||||||||    
T  45889257 taaaaccatttttctctctcctttcatttatacatttgtcttaatatatgtga 45889205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 325 - 444
Target Start/End: Original strand, 52432345 - 52432464
Alignment:
Q  325 caattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctct-ttctcccagttataca 423  Q
    |||||||||||||||||||||||||||||| | ||  | ||||||||||||||||||||||  ||||||||  |||||||||| ||||  || |||||||    
T  52432345 caattcaatatatttcactttacatttatggtagtaaagaatgcatcaatacttaacaagagcacttaaaatcatttttctctcttct-tcatttataca 52432443  T
Q  424 tttttcttaatatatgtgaaa 444  Q
    ||| ||||||| | |||||||    
T  52432444 tttgtcttaatgtgtgtgaaa 52432464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 292 - 462
Target Start/End: Complemental strand, 3718957 - 3718788
Alignment:
Q  292 tataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatactt 391  Q
    ||||||| |||| |||| ||| || || | |||||||||||||||||  ||||||||||||||||  ||   ||||||  ||||||| ||||||  ||||    
T  3718957 tataactctaattaatactaccttcatcactctcaattcaatatattatactttacatttatgataatgataaatgcacaaatacttgacaagagcactt 3718858  T
Q  392 aaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaatggttcactt 462  Q
    ||||| |||||||||| |||  || | |||||||||||||||||  |||||||| ||||||  ||||||||    
T  3718857 aaaactatttttctctctct-tcattaatacatttttcttaataagtgtgaaatgagcaaaatgttcactt 3718788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 325 - 455
Target Start/End: Original strand, 32348251 - 32348381
Alignment:
Q  325 caattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttatacat 424  Q
    |||||||||||||| |||||| ||||| |||| ||||| |||  | |||||||||||||||  ||||||||| |||||||||| ||   || ||||||||    
T  32348251 caattcaatatattccactttgcatttgtgatagtggaaaatagaccaatacttaacaagagcacttaaaaccatttttctctctccttcatttatacat 32348350  T
Q  425 ttttcttaatatatgtgaaataagcaaatgg 455  Q
    || ||||||||| |||||  | |||||||||    
T  32348351 ttgtcttaatatgtgtgatttgagcaaatgg 32348381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 288 - 434
Target Start/End: Original strand, 40019755 - 40019901
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaat 387  Q
    ||||||||||| |||| ||||||||||| || | ||| |||||||||| |||||||||   ||||||||  |||  ||| ||  ||||||| ||||||      
T  40019755 caattataactctaattaatattactttcatcactctgaattcaatatttttcactttgtctttatgataatggtgaatacacaaatacttgacaagagc 40019854  T
Q  388 acttaaaacaatttttctctttctcccagttatacatttttcttaat 434  Q
    |||||||||||||||||||| ||   || ||||||||||||||||||    
T  40019855 acttaaaacaatttttctctctcattcacttatacatttttcttaat 40019901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 291 - 445
Target Start/End: Complemental strand, 52830522 - 52830369
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||| |||||| | ||||||||| || |||| ||||| |||||||| ||||||||||||||||| ||||| |||||| |||||||||||||    |||    
T  52830522 ttataattttaattagtattactttcatcattc-caattgaatatattccactttacatttatgatagtggaaaatgcaccaatacttaacaaatgcact 52830424  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
     ||||  |||||||||| ||   || |||||||||||| ||||||  ||||||||    
T  52830423 caaaattatttttctctctccttcatttatacattttttttaatacgtgtgaaat 52830369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 338 - 454
Target Start/End: Original strand, 49944978 - 49945094
Alignment:
Q  338 ttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctct-ttctcccagttatacatttttcttaatat 436  Q
    |||||||| |||||||||| | | | ||||||  ||||||||||||||  ||||||||| |||||||||| ||||  || ||||||||||||||||||||    
T  49944978 ttcactttgcatttatgatagagaagaatgcacaaatacttaacaagagcacttaaaaccatttttctctcttct-tcatttatacatttttcttaatat 49945076  T
Q  437 atgtgaaataagcaaatg 454  Q
     |||||||| ||||||||    
T  49945077 gtgtgaaatgagcaaatg 49945094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 291 - 407
Target Start/End: Complemental strand, 17724823 - 17724707
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| |||| || ||| || | || |||||||||| |||  ||||| |||||||| | ||||| |||||||||||| |||||||||  |||    
T  17724823 ttataactctaattaatactattttcatcactcccaattcaataaattctactttgcatttatggtagtggagaatgcatcaataattaacaagagcact 17724724  T
Q  391 taaaacaatttttctct 407  Q
    |||||||||||||||||    
T  17724723 taaaacaatttttctct 17724707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 291 - 442
Target Start/End: Original strand, 8327716 - 8327867
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| |||| |||||| || | ||||||||||||||||| || ||| |||||||||| | ||| |||  | |||||||||||||||  |||    
T  8327716 ttataactctaattaatactactttcatcactctcaattcaatatattccattttgcatttatgataggggagaatagaccaatacttaacaagagcact 8327815  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtga 442  Q
    |||||  |||||||||| ||   || |||||||||| |||||| || |||||    
T  8327816 taaaattatttttctctctcattcatttatacatttgtcttaaaatgtgtga 8327867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 349 - 445
Target Start/End: Original strand, 28908144 - 28908242
Alignment:
Q  349 tttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcc--cagttatacatttttcttaatatatgtgaaat 445  Q
    |||| ||| ||||| ||||||  |||||||||||||| |||||||||  |||||||||| |||||  || |||||||||||||||||||| ||||||||    
T  28908144 tttaagatagtggagaatgcactaatacttaacaagagtacttaaaatcatttttctctctctccttcatttatacatttttcttaatatgtgtgaaat 28908242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 288 - 378
Target Start/End: Complemental strand, 52382498 - 52382408
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatactt 378  Q
    ||||||||||| |||| ||||||||||| |  | |||||||||||||||||| ||||||||||||||||   | | |||||||||||||||    
T  52382498 caattataactctaattaatattactttcaccactctcaattcaatatattttactttacatttatgataaagaagaatgcatcaatactt 52382408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 331 - 455
Target Start/End: Original strand, 8773281 - 8773406
Alignment:
Q  331 aatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaac-aatttttctctttctcccagttatacatttttc 429  Q
    |||||||| |||||| ||| |||||  ||||| |||||| |||||||||||||||  ||||||||| | ||||||||| ||   || |||||| ||||||    
T  8773281 aatatattccactttgcatatatgacagtggagaatgcaccaatacttaacaagagcacttaaaactattttttctctctcgatcatttatacgtttttc 8773380  T
Q  430 ttaatatatgtgaaataagcaaatgg 455  Q
    ||||||| |||||| | |||||||||    
T  8773381 ttaatatgtgtgaattgagcaaatgg 8773406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 447
Target Start/End: Complemental strand, 10370244 - 10370137
Alignment:
Q  341 actttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctccc--agttatacatttttcttaatatat 438  Q
    ||||| |||||||||||||| | ||||||| |||||||||||| |  ||||||||| |||||| ||| |||||   | ||||||||||||||||||||||    
T  10370244 actttgcatttatgatggtgaagaatgcattaatacttaacaaaagcacttaaaactattttt-tctctctcctttatttatacatttttcttaatatat 10370146  T
Q  439 gtgaaataa 447  Q
    || ||||||    
T  10370145 gtaaaataa 10370137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 326 - 407
Target Start/End: Original strand, 46496052 - 46496133
Alignment:
Q  326 aattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctct 407  Q
    ||||||||||||| |||||| ||||||||||  |||| ||| ||||||| ||||||||||| ||| ||||| ||||||||||    
T  46496052 aattcaatatattccactttgcatttatgataatggagaatacatcaatccttaacaagaacactcaaaaccatttttctct 46496133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 293 - 413
Target Start/End: Original strand, 21304385 - 21304505
Alignment:
Q  293 ataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatactta 392  Q
    |||||| |||| ||||||||||| || | ||| |||||||||||||||||||| |||||||||| || || ||||||   |||| ||||||||  |||||    
T  21304385 ataactgtaattaatattactttcatcactcttaattcaatatatttcactttgcatttatgatagtcgagaatgcactgatacataacaagatcactta 21304484  T
Q  393 aaacaatttttctctttctcc 413  Q
    |||  |||||| ||| |||||    
T  21304485 aaatcatttttttctctctcc 21304505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 288 - 455
Target Start/End: Complemental strand, 11425981 - 11425814
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaat 387  Q
    |||||||||||||||| |||| |||||| | || |  |||| |||||||||  ||||||||||||||||   | | |||| | |||||||||||||  |     
T  11425981 caattataactttaattaatactactttcactacttccaatacaatatattctactttacatttatgataaagaagaatggaccaatacttaacaaagac 11425882  T
Q  388 acttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaatgg 455  Q
    ||| ||||| |||||||||| ||   || | ||| ||||||||||||| | ||||||| |||||||||    
T  11425881 actcaaaactatttttctctctccttcactaatatatttttcttaataaacgtgaaatgagcaaatgg 11425814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 326 - 385
Target Start/End: Original strand, 36784348 - 36784407
Alignment:
Q  326 aattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaaga 385  Q
    |||||||||||||||||||| |||||||||| ||||| ||||||  ||||||||||||||    
T  36784348 aattcaatatatttcactttgcatttatgatagtggaaaatgcacaaatacttaacaaga 36784407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 454
Target Start/End: Original strand, 46880415 - 46880577
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||  ||||||||||| || || ||||||| ||||||||  |||||||||||||||| ||||| ||  || | |||||||| ||||   ||    
T  46880415 ttataactctaactaatattactttcatcat-ctcaatttaatatattcaactttacatttatgatagtggagaagacaccgatacttaataagagctct 46880513  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaatg 454  Q
     ||||  |||||||||| ||   || ||||||| |||||||||||| |||||||||| ||||||    
T  46880514 caaaatcatttttctctctccttcatttatacaattttcttaatatgtgtgaaataaacaaatg 46880577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 291 - 436
Target Start/End: Complemental strand, 3555664 - 3555519
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| |||| |||||| ||   || |||||||||||||| |||||| |||||||||| ||||| |||  | |||||||||| || |  |||    
T  3555664 ttataactctaattaatactactttcatctatcccaattcaatatattccactttgcatttatgatagtggagaatagaccaatacttaaaaaaagcact 3555565  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatat 436  Q
    |||||| ||||||| || ||   || |||||||||| |||||||||    
T  3555564 taaaaccatttttccctatccttcatttatacatttgtcttaatat 3555519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 454
Target Start/End: Original strand, 48391755 - 48391911
Alignment:
Q  300 taatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaat 399  Q
    |||| ||||||||||| || | ||  |||||||||||||||||||||||||| ||||| || | ||||||  ||||  |||||| || ||||||  | ||    
T  48391755 taattaatattactttcatcactcataattcaatatatttcactttacatttgtgatgatgaagaatgcacaaatatataacaaaaacacttaagcctat 48391854  T
Q  400 ttttctctttctcc--cagttatacatttttcttaatatatgtgaaataagcaaatg 454  Q
    |||||||  |||||  |  |||| ||||||||||||||||| |||||| | ||||||    
T  48391855 ttttctccctctccttcgtttatccatttttcttaatatatttgaaatgaacaaatg 48391911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 445
Target Start/End: Original strand, 6787288 - 6787400
Alignment:
Q  333 tatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttatacatttttctta 432  Q
    |||||| ||||||||||||||||| |||||||||| |  |||| |||||||  | | ||||||| |||||||||| |||  |  ||||| ||||||||||    
T  6787288 tatattccactttacatttatgatagtggataatgtactaatatttaacaaatacatttaaaactatttttctctctctttcgtttatatatttttctta 6787387  T
Q  433 atatatgtgaaat 445  Q
    |||  ||||||||    
T  6787388 atacgtgtgaaat 6787400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 412
Target Start/End: Original strand, 7787710 - 7787782
Alignment:
Q  340 cactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctc 412  Q
    ||||||||||||||||| ||||| ||| || ||||||||||||||  |||||||||| |||| ||||| ||||    
T  7787710 cactttacatttatgatagtggagaatacaccaatacttaacaagtgtacttaaaactatttctctctctctc 7787782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 385
Target Start/End: Original strand, 45305850 - 45305946
Alignment:
Q  289 aattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaaga 385  Q
    ||||||||||||||| || |||| ||| || | |||||||||||||||||  ||||| ||||||||||  || | ||||||| ||||||| ||||||    
T  45305850 aattataactttaattaaaattattttcatcaatctcaattcaatatattctactttgcatttatgataatgaagaatgcataaatacttgacaaga 45305946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 226 - 451
Target Start/End: Complemental strand, 13500896 - 13500676
Alignment:
Q  226 tattgtcctaaaattacttacatatttcacttttcaatacaatattaattacnnnnnnnnnncaattataactttaatcaatattactttaattattctc 325  Q
    |||||||||||||| |||||   ||||||||||| |||||||||||||||             |||||||| | |||| |||| |||||| |  | || |    
T  13500896 tattgtcctaaaataacttatccatttcactttttaatacaatattaatt-------ttttttaattataattctaattaatactactttcagcactccc 13500804  T
Q  326 aattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctc--ccagttataca 423  Q
    |||||||||| || |||||| |||||||||| ||| | |||||| |||||| |||||| |  ||||||||  |||| ||| | ||||   || |||||||    
T  13500803 aattcaatattttccactttgcatttatgatagtgaagaatgcaccaatacataacaaaagcacttaaaatcatttctctttctctcattcatttataca 13500704  T
Q  424 tttttcttaatatatgtgaaataagcaa 451  Q
    ||||||||||||| ||| ||||||||||    
T  13500703 tttttcttaatatgtgtaaaataagcaa 13500676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 326 - 445
Target Start/End: Complemental strand, 21304880 - 21304762
Alignment:
Q  326 aattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttatacatt 425  Q
    |||||||||||||  |||||| |||||||||   | | ||||||||||||||| ||||  | ||| |||||||||||  ||| |||  || |||||||||    
T  21304880 aattcaatatattatactttatatttatgataaagaaaaatgcatcaatacttgacaaagacactcaaaacaatttta-tctctctttcatttatacatt 21304782  T
Q  426 tttcttaatatatgtgaaat 445  Q
    ||||||||| ||||||||||    
T  21304781 tttcttaatttatgtgaaat 21304762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 289 - 408
Target Start/End: Original strand, 25842596 - 25842714
Alignment:
Q  289 aattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaata 388  Q
    |||||||||| |||| || | |||||| || ||||||||| |||||||||  ||||||||||||||||  | || |||| | |||||||||| ||| | |    
T  25842596 aattataactataattaacactactttcatcattctcaatgcaatatattctactttacatttatgataatagaaaatgtaccaatacttaataag-aca 25842694  T
Q  389 cttaaaacaatttttctctt 408  Q
    || ||||| |||||||||||    
T  25842695 ctcaaaactatttttctctt 25842714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 435
Target Start/End: Original strand, 27391360 - 27391490
Alignment:
Q  305 aatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttc 404  Q
    ||||||||||| |  ||| ||||||||||||||| |||||| ||||||||||  | |  |||| | |||||||||| ||||  ||||||||  |||||||    
T  27391360 aatattactttcaccattttcaattcaatatattccactttgcatttatgataatagtaaatgaaccaatacttaataagagcacttaaaatcatttttc 27391459  T
Q  405 tctttctcccagttatacatttttcttaata 435  Q
    ||| ||   || ||||||||||||| |||||    
T  27391460 tctctccttcacttatacatttttcgtaata 27391490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 340
Target Start/End: Original strand, 27698811 - 27698860
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttc 340  Q
    |||||||| |||| ||||||||||| || |||||||||||||||||||||    
T  27698811 ttataactctaattaatattactttcatcattctcaattcaatatatttc 27698860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 288 - 447
Target Start/End: Original strand, 27831841 - 27831999
Alignment:
Q  288 caattata-actttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaa 386  Q
    |||||||| ||| |||| |||| |||||| || | || ||||||||||| || |||||| ||||||||||  |||  |||||| |||||||| |||||      
T  27831841 caattatacactctaattaatactactttcatcactcccaattcaatatcttccactttgcatttatgataatggtgaatgcaccaatacttgacaaggg 27831940  T
Q  387 tacttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataa 447  Q
     ||||||||| |||||||||  |||  || | || || |||||||||||| ||||||||||    
T  27831941 cacttaaaactatttttctc--tctttcactcatgcacttttcttaatatttgtgaaataa 27831999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 326 - 407
Target Start/End: Original strand, 30749965 - 30750046
Alignment:
Q  326 aattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctct 407  Q
    ||||||||||||  |||||| |||||||||| || || ||| |||||||| ||||||| |  ||||||||| ||||||||||    
T  30749965 aattcaatatataccactttgcatttatgatagtagagaatacatcaatatttaacaaaagcacttaaaactatttttctct 30750046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 326 - 407
Target Start/End: Original strand, 30771416 - 30771497
Alignment:
Q  326 aattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctct 407  Q
    ||||||||||||  |||||| |||||||||| || || ||| |||||||| ||||||| |  ||||||||| ||||||||||    
T  30771416 aattcaatatataccactttgcatttatgatagtagagaatacatcaatatttaacaaaagcacttaaaactatttttctct 30771497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 248 - 356
Target Start/End: Original strand, 31798377 - 31798482
Alignment:
Q  248 tatttcacttttcaatacaatattaattacnnnnnnnnnncaattataactttaatcaatattactttaattattctcaattcaatatatttcactttac 347  Q
    ||||||||||||||||| ||||||||||||          ||||||||||  |||| ||||||||||| | || |||||||||||||||||  ||||| |    
T  31798377 tatttcacttttcaatataatattaattacttttttc---caattataacactaattaatattactttcactactctcaattcaatatattctactttgc 31798473  T
Q  348 atttatgat 356  Q
    |||||||||    
T  31798474 atttatgat 31798482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 290 - 403
Target Start/End: Complemental strand, 34877200 - 34877087
Alignment:
Q  290 attataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatac 389  Q
    ||||||||| |||| ||||||| ||| || | || ||||||||||||||  ||||| ||||||||||  | || ||||||  |||| ||||| |||  ||    
T  34877200 attataactctaattaatattattttcatcactcacaattcaatatattcaactttgcatttatgataatagaaaatgcacgaatatttaaccagagcac 34877101  T
Q  390 ttaaaacaattttt 403  Q
    ||||||||||||||    
T  34877100 ttaaaacaattttt 34877087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 348
Target Start/End: Original strand, 16451627 - 16451687
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttaca 348  Q
    |||||||||||||||| |||| |||||| |  | |||||||||||||||||| ||||||||    
T  16451627 caattataactttaattaatactactttcacaactctcaattcaatatatttaactttaca 16451687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 348
Target Start/End: Original strand, 16460780 - 16460840
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttaca 348  Q
    |||||||||||||||| |||| |||||| |  | |||||||||||||||||| ||||||||    
T  16460780 caattataactttaattaatactactttcacaactctcaattcaatatatttaactttaca 16460840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 443
Target Start/End: Original strand, 1608064 - 1608137
Alignment:
Q  372 aatacttaacaagaatacttaaaacaatttttctctttctc--ccagttatacatttttcttaatatatgtgaa 443  Q
    |||||||||||||| | |||||||| |||||||||| ||||  ||  |||||||||||||| ||||| ||||||    
T  1608064 aatacttaacaagagtccttaaaaccatttttctctctctcatccgtttatacatttttctgaatatgtgtgaa 1608137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 407
Target Start/End: Original strand, 40061806 - 40061924
Alignment:
Q  289 aattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaata 388  Q
    |||||||| | |||| ||||||||||| || | |||||||||||||||||  | ||| ||||||||||  || | |||| | |||||||| | ||||| |    
T  40061806 aattataattctaattaatattactttcatcactctcaattcaatatattctaatttgcatttatgataatgaaaaatgtaacaatacttgataagaaca 40061905  T
Q  389 cttaaaacaatttttctct 407  Q
     ||||||  ||||||||||    
T  40061906 tttaaaatcatttttctct 40061924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 436
Target Start/End: Complemental strand, 51848769 - 51848656
Alignment:
Q  325 caattcaatatatttcactttacatttatgatggtggataatgcatca--atacttaacaagaatacttaaaacaatttttctctttctcccagttatac 422  Q
    |||||||||||||| ||||||| ||||||||| ||||| ||| || ||  ||| ||||||| |  ||||||||| |||||||| | ||   || ||||||    
T  51848769 caattcaatatattccactttatatttatgatagtggagaatacaccaatatatttaacaatagcacttaaaactatttttctatctccatcatttatac 51848670  T
Q  423 atttttcttaatat 436  Q
    |||| |||||||||    
T  51848669 atttatcttaatat 51848656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 444
Target Start/End: Original strand, 2571363 - 2571514
Alignment:
Q  292 tataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatactt 391  Q
    ||||||| || | |||| |||||| || | |||||||||||||||||  ||||| |||||| |||     |||||||| |||||||||||||| | |||     
T  2571363 tataactctagttaatactactttcatcactctcaattcaatatattctactttgcatttaggataagaaataatgcaccaatacttaacaag-acactc 2571461  T
Q  392 aaaacaatttttctctttctcccagttataca-tttttcttaatatatgtgaaa 444  Q
    ||||| | |||||||| |||  || ||||||| ||||||||||||| |||||||    
T  2571462 aaaacta-ttttctctctctttcatttatacattttttcttaatatgtgtgaaa 2571514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 277
Target Start/End: Original strand, 15290449 - 15290478
Alignment:
Q  248 tatttcacttttcaatacaatattaattac 277  Q
    ||||||||||||||||||||||||||||||    
T  15290449 tatttcacttttcaatacaatattaattac 15290478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 385
Target Start/End: Original strand, 25869711 - 25869776
Alignment:
Q  320 attctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaaga 385  Q
    ||||||||| |||||||||  ||||||||||||||||  | || |||| |||||||||||| ||||    
T  25869711 attctcaatgcaatatattctactttacatttatgataatagaaaatgtatcaatacttaataaga 25869776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 277
Target Start/End: Complemental strand, 37541266 - 37541237
Alignment:
Q  248 tatttcacttttcaatacaatattaattac 277  Q
    ||||||||||||||||||||||||||||||    
T  37541266 tatttcacttttcaatacaatattaattac 37541237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 292 - 356
Target Start/End: Complemental strand, 705457 - 705393
Alignment:
Q  292 tataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    ||||||| |||| ||||||||||| |  | |||||||||||||||||  ||||||||| ||||||    
T  705457 tataactctaattaatattacttttaccactctcaattcaatatattatactttacatctatgat 705393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Complemental strand, 2219595 - 2219567
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  2219595 atttcacttttcaatacaatattaattac 2219567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Original strand, 2886131 - 2886159
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  2886131 atttcacttttcaatacaatattaattac 2886159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Original strand, 6784963 - 6784991
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  6784963 atttcacttttcaatacaatattaattac 6784991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 356
Target Start/End: Original strand, 10707971 - 10708027
Alignment:
Q  300 taatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    |||| |||||||||||||| |||| ||||||||||| ||  ||||| ||||||||||    
T  10707971 taattaatattactttaatcattcacaattcaatatcttcaactttgcatttatgat 10708027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Complemental strand, 14358154 - 14358126
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  14358154 atttcacttttcaatacaatattaattac 14358126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Original strand, 26583688 - 26583716
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  26583688 atttcacttttcaatacaatattaattac 26583716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Original strand, 26760117 - 26760145
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  26760117 atttcacttttcaatacaatattaattac 26760145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Complemental strand, 26924417 - 26924389
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  26924417 atttcacttttcaatacaatattaattac 26924389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Original strand, 27698772 - 27698800
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  27698772 atttcacttttcaatacaatattaattac 27698800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 356
Target Start/End: Original strand, 29225749 - 29225817
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    ||||||||||| |||| |||| |||||| || | || ||||||||||||||  ||||| ||||||||||    
T  29225749 caattataactctaattaatactactttcatcactcccaattcaatatattctactttgcatttatgat 29225817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Complemental strand, 29756292 - 29756264
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  29756292 atttcacttttcaatacaatattaattac 29756264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Complemental strand, 36467343 - 36467315
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  36467343 atttcacttttcaatacaatattaattac 36467315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Original strand, 36784274 - 36784302
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  36784274 atttcacttttcaatacaatattaattac 36784302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 356
Target Start/End: Complemental strand, 37925358 - 37925290
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    ||||||||||  |||| ||||||||||| |  | |||||||||||||||||  ||||| ||||||||||    
T  37925358 caattataacactaattaatattactttcaccactctcaattcaatatattctactttgcatttatgat 37925290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Original strand, 43895807 - 43895835
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  43895807 atttcacttttcaatacaatattaattac 43895835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Original strand, 46536300 - 46536328
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  46536300 atttcacttttcaatacaatattaattac 46536328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Complemental strand, 48242738 - 48242710
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  48242738 atttcacttttcaatacaatattaattac 48242710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Complemental strand, 52830561 - 52830533
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  52830561 atttcacttttcaatacaatattaattac 52830533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 9e-31; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 291 - 435
Target Start/End: Original strand, 30463015 - 30463159
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| ||||||||||| || ||| ||||||||||||||| || |||||||||||||| ||||| |||||| ||||||||||||||   |||    
T  30463015 ttataactctaattaatattactttcatcattttcaattcaatatattccattttacatttatgattgtggagaatgcaccaatacttaacaagtgcact 30463114  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaata 435  Q
    |||||| |||||||||| ||   || |||||||||||||||||||    
T  30463115 taaaactatttttctctctcattcatttatacatttttcttaata 30463159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 292 - 454
Target Start/End: Original strand, 27234503 - 27234664
Alignment:
Q  292 tataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatactt 391  Q
    |||||||||||| |||| || ||| || | || ||||| ||||||||||  ||| |||||||||| ||||| |||||||||||||||||||| || ||||    
T  27234503 tataactttaattaatactattttcatcactcacaatttaatatatttcgttttgcatttatgatagtggagaatgcatcaatacttaacaaaaacactt 27234602  T
Q  392 aaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaatg 454  Q
    ||||||| |||||||| ||   || |||||||||||||||||||| |||||||| | ||||||    
T  27234603 aaaacaa-ttttctctgtcattcatttatacatttttcttaatatgtgtgaaatgaacaaatg 27234664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 291 - 435
Target Start/End: Complemental strand, 34963919 - 34963772
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtg---gataatgcatcaatacttaacaagaat 387  Q
    |||||||| |||| ||||||||||| || |||||||||| |||||||||||||||||||||||||| |||   || |||||| ||||| ||||||||       
T  34963919 ttataactctaattaatattactttcatcattctcaattaaatatatttcactttacatttatgatagtgaaagagaatgcaccaatatttaacaagttc 34963820  T
Q  388 acttaaaacaatttttctctttctcccagttatacatttttcttaata 435  Q
    ||||||||| |||||||||  |||  || |||||||||||||||||||    
T  34963819 acttaaaactatttttctccctctatcatttatacatttttcttaata 34963772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 291 - 435
Target Start/End: Original strand, 36117660 - 36117805
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatg-atggtggataatgcatcaatacttaacaagaatac 389  Q
    ||||||||||||| ||||| ||||| || ||| ||||||||||||||| ||||||||||||||| || ||||| ||||||  |||||||||||||   ||    
T  36117660 ttataactttaattaatatcactttcatcattttcaattcaatatattccactttacatttatgaatagtggagaatgcacaaatacttaacaagtgcac 36117759  T
Q  390 ttaaaacaatttttctctttctcccagttatacatttttcttaata 435  Q
    ||||||| |||||||||||||    | |||||||||||||||||||    
T  36117760 ttaaaactatttttctctttcctttatttatacatttttcttaata 36117805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 291 - 433
Target Start/End: Complemental strand, 2842160 - 2842018
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||| | |||| |||| |||||| || | ||| |||||||||||||||||||| |||||||||| ||||| ||||||||||||||| |||| || |||    
T  2842160 ttataattataattaatactactttcatcactctaaattcaatatatttcactttgcatttatgatagtggagaatgcatcaatacttgacaataacact 2842061  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaa 433  Q
    ||| || |||||||||| ||   || |||||||||||||||||    
T  2842060 taacaccatttttctctctccttcatttatacatttttcttaa 2842018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 291 - 445
Target Start/End: Complemental strand, 37490726 - 37490572
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||| | |||| ||||||||||| || | | ||||||||||||||| |||||| |||||||||| ||||| |||||| |||||||||| || || |||    
T  37490726 ttataattctaattaatattacttttatcactatcaattcaatatattccactttgcatttatgatagtggagaatgcaccaatacttaaaaaaaacact 37490627  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    |||||  |||||||||| ||   || ||||||||||||||||| || ||||||||    
T  37490626 taaaatcatttttctctctccttcatttatacatttttcttaacatgtgtgaaat 37490572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 326 - 445
Target Start/End: Complemental strand, 5724780 - 5724662
Alignment:
Q  326 aattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttatacatt 425  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||  |||||||||||||   ||||||||| |||||||||| ||   || |||||||||    
T  5724780 aattcaatatatttcactttacatttatgatagtggagaatgcactaatacttaacaag-gcacttaaaactatttttctctctccttcatttatacatt 5724682  T
Q  426 tttcttaatatatgtgaaat 445  Q
    ||||||||||  ||||||||    
T  5724681 tttcttaatacgtgtgaaat 5724662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 331 - 445
Target Start/End: Original strand, 23058858 - 23058971
Alignment:
Q  331 aatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttatacatttttct 430  Q
    ||||||||||||||| |||||||||| ||||| |||||| ||||||| |||||||| ||||||||| |||||||||| |||  || ||||| ||||||||    
T  23058858 aatatatttcactttgcatttatgatagtggagaatgcaccaatact-aacaagaacacttaaaactatttttctctctctttcatttatatatttttct 23058956  T
Q  431 taatatatgtgaaat 445  Q
    |||||  ||||||||    
T  23058957 taatacgtgtgaaat 23058971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 291 - 445
Target Start/End: Original strand, 47454003 - 47454157
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| | || |||||| || |||  ||| |||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||   |||    
T  47454003 ttataactataattattactactttcatcatttacaaatcaatatatttcactttacatttatgatagtggagaatgcaccaatacttaacaagtgcact 47454102  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    |||||| ||||| |||| ||   || ||||| |||||||||||||  ||||||||    
T  47454103 taaaactattttactctctccttcatttatatatttttcttaatacgtgtgaaat 47454157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 325 - 445
Target Start/End: Complemental strand, 7425952 - 7425831
Alignment:
Q  325 caattcaatatatttcactttacatttatgatggtggataatgcatcaatactt-aacaagaatacttaaaacaatttttctctttctcccagttataca 423  Q
    |||||||||||||| |||||| |||||||||| ||||| |||||| |||||||| |||||||| ||||||||| |||||||||| ||   || |||||||    
T  7425952 caattcaatatattccactttgcatttatgatagtggagaatgcaccaatacttaaacaagaacacttaaaaccatttttctctctcattcatttataca 7425853  T
Q  424 tttttcttaatatatgtgaaat 445  Q
    ||| ||||||||  ||||||||    
T  7425852 tttgtcttaatacgtgtgaaat 7425831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 291 - 407
Target Start/End: Original strand, 23703915 - 23704031
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| |||| |||||| || ||| |||||||||||||||||| |||||||||||||| ||||| |||||| ||||| ||||||||    ||    
T  23703915 ttataactctaattaatactacttttatcattttcaattcaatatatttcattttacatttatgatagtggagaatgcagcaataattaacaagtgcgct 23704014  T
Q  391 taaaacaatttttctct 407  Q
    |||||| ||||||||||    
T  23704015 taaaactatttttctct 23704031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 291 - 459
Target Start/End: Complemental strand, 44604585 - 44604418
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| |||| |||||| || | |||||| |||||||||| |||||| | |||||||| ||||| |||  | |||||||||||||||| |||    
T  44604585 ttataactctaattaatactactttcatcactctcaactcaatatattccactttgc-tttatgatagtggagaataaaccaatacttaacaagaacact 44604487  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaatggttca 459  Q
    |||||  |||||||||| ||   || |||||||||| ||||||||| |||||  | |||||||||||||    
T  44604486 taaaatcatttttctctctccttcatttatacatttgtcttaatatgtgtgatttgagcaaatggttca 44604418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 325 - 455
Target Start/End: Original strand, 11616594 - 11616724
Alignment:
Q  325 caattcaat-atatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttataca 423  Q
    ||||||||| ||||| |||||| ||| |||||| ||||| |||||| |||||||||||||||  ||||||||| |||||||||| ||   || |||||||    
T  11616594 caattcaattatattccactttgcatatatgatagtggagaatgcaccaatacttaacaagagcacttaaaaccatttttctctctccttcatttataca 11616693  T
Q  424 tttttcttaatatatgtgaaataagcaaatgg 455  Q
    ||||| ||||||| |||||||| |||||||||    
T  11616694 ttttt-ttaatatgtgtgaaatgagcaaatgg 11616724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 249 - 403
Target Start/End: Complemental strand, 31581590 - 31581439
Alignment:
Q  249 atttcacttttcaatacaatattaattacnnnnnnnnnncaattataactttaatcaatattactttaattattctcaattcaatatatttcactttaca 348  Q
    |||||||||||||||||||||||||||||          || |||||||| |||| |||| |||||| || ||| ||||||||||||||| || ||||||    
T  31581590 atttcacttttcaatacaatattaattacttttttc---catttataactctaattaatactactttcatcattttcaattcaatatattccattttaca 31581494  T
Q  349 tttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaattttt 403  Q
    ||||||||  |||| |||||| |||||||||||||   |||||||||| ||||||    
T  31581493 tttatgatattggagaatgcaccaatacttaacaaatgtacttaaaactattttt 31581439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 291 - 445
Target Start/End: Complemental strand, 29434688 - 29434535
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| |||| |||||| || |||| |||||||||||||| |||||| |||||||||  ||||| ||| || ||||||||||||| |  |||    
T  29434688 ttataactctaattaatactactttcatcattcacaattcaatatattccactttgcatttatgaaagtggagaatccaccaatacttaacaaaagcact 29434589  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    |||||| |||||||||| |||  || ||| | | |||||||||||| ||||||||    
T  29434588 taaaactatttttctctctct-tcatttaaaaaattttcttaatatgtgtgaaat 29434535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 291 - 445
Target Start/End: Complemental strand, 49100610 - 49100457
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    ||||||||||||| |||  || ||| || |||  |||||||||||||| ||||||||||||||||| ||||| |||  | ||||||||||||||   |||    
T  49100610 ttataactttaattaattctatttttatcatttccaattcaatatattccactttacatttatgatagtggagaataaaccaatacttaacaagtgcact 49100511  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    | |||| |||||||||| |||  || |||||||||||||||||||  ||||||||    
T  49100510 t-aaactatttttctctgtctttcatttatacatttttcttaatacgtgtgaaat 49100457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 325 - 445
Target Start/End: Complemental strand, 33774117 - 33773997
Alignment:
Q  325 caattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttataca- 423  Q
    ||||||| |||||| |||||| ||| |||||| ||||| ||| ||||||||||||||||| | ||| ||||| |||||||||| |||  || |||||||     
T  33774117 caattcagtatattccactttgcatctatgatagtggagaatacatcaatacttaacaag-acactcaaaactatttttctctctctttcacttatacac 33774019  T
Q  424 tttttcttaatatatgtgaaat 445  Q
    ||||||||||||||||||||||    
T  33774018 tttttcttaatatatgtgaaat 33773997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 291 - 455
Target Start/End: Original strand, 29257546 - 29257710
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| ||||||||||| || | || |||||||||||||| |||||| |||||||||| ||||| |||  | ||||| |||||||||  |||    
T  29257546 ttataactctaattaatattactttcatcactcccaattcaatatattccactttgcatttatgatagtggaaaatagaccaataattaacaagagcact 29257645  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaatgg 455  Q
    |||||| |||||| ||| |    || |||||||||| ||||||||| |||||  | |||||||||    
T  29257646 taaaaccatttttttctctgcttcatttatacatttgtcttaatatgtgtgatttgagcaaatgg 29257710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 305 - 467
Target Start/End: Complemental strand, 46095514 - 46095353
Alignment:
Q  305 aatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttc 404  Q
    |||| |||||| || | |||||||||||||||||||||||| |||||||||| || || ||||||  |||| |||||||||  ||| ||||| ||||||     
T  46095514 aatactacttttatcactctcaattcaatatatttcactttgcatttatgatagtagagaatgcacaaatatttaacaagagcactcaaaaccattttt- 46095416  T
Q  405 tctttctcc--cagttatacatttttcttaatatatgtgaaataagcaaatggttcacttcatcc 467  Q
      |||||||   | |||||||||||||||||||| | |||||| ||||||||  |||||| ||||    
T  46095415 --tttctcctttatttatacatttttcttaatatgtatgaaattagcaaatgtctcacttaatcc 46095353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 310 - 384
Target Start/End: Complemental strand, 21387569 - 21387495
Alignment:
Q  310 tactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaag 384  Q
    |||||| || ||| ||||||||||||||| ||||||||||||||||| ||||| |||||| ||||||||||||||    
T  21387569 tactttcatcattttcaattcaatatattccactttacatttatgatagtggagaatgcaccaatacttaacaag 21387495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 291 - 436
Target Start/End: Complemental strand, 2846784 - 2846639
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| |||| |||||| || | |  |||||||||||||| ||||||  ||||||||| ||||| |||  | |||||||||||||||  |||    
T  2846784 ttataactctaattaatactactttcatcaattccaattcaatatattccactttgaatttatgatagtggagaatagaccaatacttaacaagagcact 2846685  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatat 436  Q
    |||||| |||||||||| ||   || |||||||||| |||||||||    
T  2846684 taaaactatttttctctctcgttcatttatacatttgtcttaatat 2846639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 288 - 445
Target Start/End: Original strand, 2849251 - 2849408
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaat 387  Q
    ||||||||| | |||| |||| |||||| |  | |||||||||||||||||  ||||||||||||||||   | | |||||| |||||||| ||||  |     
T  2849251 caattataattctaattaatactactttcaccactctcaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgacaaagac 2849350  T
Q  388 acttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    ||  ||||| |||||||||| |||  || |||||||||||||||||||| ||||||||    
T  2849351 acgcaaaactatttttctctctctttcatttatacatttttcttaatatgtgtgaaat 2849408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 288 - 444
Target Start/End: Original strand, 34064211 - 34064367
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaat 387  Q
    ||||||||||| |||| ||||||||||| || | |||||||||||||||||  ||||||||||||||||     | |||||| |||||||||||||| |     
T  34064211 caattataactctaattaatattactttcatcactctcaattcaatatattctactttacatttatgataagaaagaatgcaccaatacttaacaag-ac 34064309  T
Q  388 acttaaaacaatttttctctttctcccagttataca-tttttcttaatatatgtgaaa 444  Q
    ||| ||||| |||||||||| | |  || ||||||| ||||| ||||||| |||||||    
T  34064310 actcaaaactatttttctctctatttcatttatacacttttttttaatatgtgtgaaa 34064367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 325 - 444
Target Start/End: Complemental strand, 38181948 - 38181829
Alignment:
Q  325 caattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttatacat 424  Q
    ||||||||||||||  | ||| |||||||||| ||||| |||||| ||||||||| |||||| ||||||||| |||||||||| |||  || ||||| ||    
T  38181948 caattcaatatattctattttgcatttatgatagtggaaaatgcaccaatacttaccaagaacacttaaaaccatttttctctctctttcatttatatat 38181849  T
Q  425 ttttcttaatatatgtgaaa 444  Q
    |  |||||| || |||||||    
T  38181848 tagtcttaacatgtgtgaaa 38181829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 292 - 384
Target Start/End: Original strand, 28333171 - 28333263
Alignment:
Q  292 tataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaag 384  Q
    ||||||| |||| ||||||||||| || | || ||||||||||||||  ||||||||||||||||     |||||||||||||||||||||||    
T  28333171 tataactctaattaatattactttcatcactcccaattcaatatattctactttacatttatgataagaaataatgcatcaatacttaacaag 28333263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 291 - 407
Target Start/End: Original strand, 33584562 - 33584678
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| |||| |||||| || | || |||||||||||||| || ||| ||||||||||  |||| ||| || ||||||||||||| |  |||    
T  33584562 ttataactataattaatactactttcatcactcccaattcaatatattccattttgcatttatgatactggagaatacaccaatacttaacaatagcact 33584661  T
Q  391 taaaacaatttttctct 407  Q
    |||||| ||||||||||    
T  33584662 taaaaccatttttctct 33584678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 294 - 402
Target Start/End: Complemental strand, 34001964 - 34001856
Alignment:
Q  294 taactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaa 393  Q
    ||||| |||| |||| |||||| || |  |||||||||||||||| |||||| ||||||||||  ||||||   ||||||||||||||||||  ||||||    
T  34001964 taactgtaattaatactactttcatcaccctcaattcaatatattccactttgcatttatgataatggataccacatcaatacttaacaagagcacttaa 34001865  T
Q  394 aacaatttt 402  Q
    ||| |||||    
T  34001864 aaccatttt 34001856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 288 - 444
Target Start/End: Original strand, 36070101 - 36070257
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaat 387  Q
    |||||||| || |||| |||| |||||| || | |||||||||| ||||||  ||||||| ||||||||   | |||||||| ||||| || ||||  |     
T  36070101 caattatagctctaattaatactactttcatcactctcaattcagtatattctactttacgtttatgataaagaataatgcaccaatatttgacaaagac 36070200  T
Q  388 acttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaa 444  Q
    ||| ||||| ||||| |||| |||  || |||||||||||||||||| |||||||||    
T  36070201 actcaaaaccattttcctctctctttcatttatacatttttcttaatctatgtgaaa 36070257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 288 - 356
Target Start/End: Complemental strand, 37496508 - 37496440
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    |||||||||||||||| |||| |||||| || | |||||||||||||||||  ||||||||||||||||    
T  37496508 caattataactttaattaatactactttcatcactctcaattcaatatattctactttacatttatgat 37496440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 291 - 383
Target Start/End: Complemental strand, 40590933 - 40590841
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaa 383  Q
    |||||||| |||| |||| |||||| |||||||||| |||||||||||  |||||  ||||||||| | ||| |||||| |||||||||||||    
T  40590933 ttataactctaattaatactacttttattattctcatttcaatatattctactttgtatttatgatagcggaaaatgcaccaatacttaacaa 40590841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 300 - 407
Target Start/End: Original strand, 17266035 - 17266142
Alignment:
Q  300 taatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaat 399  Q
    |||| ||||||| ||| || | || |||||| |||||||||||||| |||||||||| ||| | |||||| |||||||||| || || |||| |||| ||    
T  17266035 taattaatattattttcatcactcccaattcgatatatttcactttgcatttatgatagtgaagaatgcaccaatacttaataaaaacactttaaaccat 17266134  T
Q  400 ttttctct 407  Q
    ||||||||    
T  17266135 ttttctct 17266142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 288 - 383
Target Start/End: Complemental strand, 27337984 - 27337889
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaa 383  Q
    |||||||||||||||| ||||||||||| |  | || ||||||||||||||  ||||||||||||||||   | |||||||| |||||||| ||||    
T  27337984 caattataactttaattaatattacttttaccactcccaattcaatatattatactttacatttatgataaagaataatgcaccaatacttgacaa 27337889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 291 - 384
Target Start/End: Original strand, 18235189 - 18235282
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaag 384  Q
    ||||| || |||| ||||||| ||| || |||  |||||  ||||||| ||||||||||||||||| ||||| |||||| ||||||||||||||    
T  18235189 ttatagctctaattaatattattttcatcatttccaatttcatatattccactttacatttatgatagtggagaatgcaccaatacttaacaag 18235282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 288 - 452
Target Start/End: Original strand, 32775979 - 32776144
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaat 387  Q
    ||||||||||| |||  |||| |||||| |  | || ||||||||||||||  ||||||||||||||||   | | |||||| |||||||||||||        
T  32775979 caattataactctaaataatactactttcaccactcccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttaacaaaggc 32776078  T
Q  388 acttaaaacaatttttctctttctcccagttataca-tttttcttaatatatgtgaaataagcaaa 452  Q
    ||| ||||| |||||||||| ||   || ||||||| ||||||||||||| |||||||| ||||||    
T  32776079 actcaaaaccatttttctctctccttcacttatacactttttcttaatatgtgtgaaatgagcaaa 32776144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 288 - 434
Target Start/End: Complemental strand, 5068409 - 5068266
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaat 387  Q
    ||||||||||| |||| ||||||||||| |  | ||| |||||||||||||  |||||||||||||||   |  | |||||| |||||||||| || ||     
T  5068409 caattataactctaattaatattactttcaccactcttaattcaatatattctactttacatttatga---taaagaatgcaccaatacttaataaaaac 5068313  T
Q  388 acttaaaacaatttttctctttctcccagttatacatttttcttaat 434  Q
    ||| || || |||||| |||||||  || ||||||| ||||||||||    
T  5068312 actcaatactatttttttctttctttcatttatacacttttcttaat 5068266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 288 - 356
Target Start/End: Complemental strand, 10355846 - 10355778
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    ||||||||||| |||| ||||||||||| |  |||||||||||||||||||  ||||| ||||||||||    
T  10355846 caattataactctaattaatattacttttaccattctcaattcaatatattctactttgcatttatgat 10355778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 288 - 441
Target Start/End: Complemental strand, 14649030 - 14648876
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaag--a 385  Q
    ||||||||||| |||| ||||||||||| || | |||||||||||||||||  || || ||||||||||  ||   |||||| ||||| || |||||  |    
T  14649030 caattataactctaattaatattactttcatcactctcaattcaatatattctaccttgcatttatgataatgagaaatgcaccaataattgacaagaca 14648931  T
Q  386 atacttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtg 441  Q
     || ||||||  ||||||||||||||  || |||||||||||| | ||||||||||    
T  14648930 ctaattaaaatcatttttctctttctttcacttatacattttt-tcaatatatgtg 14648876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 310 - 405
Target Start/End: Original strand, 19687977 - 19688072
Alignment:
Q  310 tactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttct 405  Q
    |||||| || |||| ||||||||||||||  ||||| ||||||||||  |||  ||| ||||||||||| ||||||| ||||||||  ||||||||    
T  19687977 tactttcatgattcacaattcaatatattatactttgcatttatgataatggtaaattcatcaatacttgacaagaacacttaaaaacatttttct 19688072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 249 - 462
Target Start/End: Original strand, 37264273 - 37264482
Alignment:
Q  249 atttcacttttcaatacaatattaattacnnnnnnnnnncaattataactttaatcaatattactttaattattctcaattcaatatatttcactttaca 348  Q
    |||||||||||||||||||||||||||||           |||||||||| |||| |||| |||||| |  | || ||||||||||||||  ||||| ||    
T  37264273 atttcacttttcaatacaatattaattactttttcct---aattataactctaattaatactactttcaccactcccaattcaatatattctactttgca 37264369  T
Q  349 tttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataag 448  Q
    ||||||||   |   ||||||||||||||| |||||   ||| ||||| |||||||||| | || |   ||||| ||||||||||||| |||||||| ||    
T  37264370 tttatgataaagagcaatgcatcaatacttgacaagggcactcaaaaccatttttctctctttcacttatatac-tttttcttaatatgtgtgaaatgag 37264468  T
Q  449 caaatggttcactt 462  Q
    |||| || ||||||    
T  37264469 caaaaggctcactt 37264482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 445
Target Start/End: Complemental strand, 22618081 - 22617989
Alignment:
Q  349 tttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    ||||||||||||   |||| ||||||||||||||| || ||||||||| ||||| ||||||||  || |||||||||||| ||||||| ||| ||||    
T  22618081 tttatgatggtg---aatgtatcaatacttaacaaaaacacttaaaacgattttcctctttctttcacttatacattttt-ttaatatgtgtcaaat 22617989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 459
Target Start/End: Complemental strand, 40038174 - 40038049
Alignment:
Q  333 tatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttatacatttttctta 432  Q
    ||||||| |||||  ||||||||| ||| | ||| || |||||||||||||||  | ||||||  |||||||||||||   || |||||||||| |||||    
T  40038174 tatattttactttgtatttatgatagtgaagaataca-caatacttaacaagatcatttaaaattatttttctctttccttcatttatacatttatctta 40038076  T
Q  433 atatatgtgaaataagcaaatggttca 459  Q
    ||||||||||  |||| ||||| ||||    
T  40038075 atatatgtgatttaagtaaatgattca 40038049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 288 - 385
Target Start/End: Complemental strand, 1099197 - 1099100
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaaga 385  Q
    |||||||||||||||| ||||||| ||| ||||| |||||||| |||||||  |||||  |||||| ||| || | |||||| ||| |||| ||||||    
T  1099197 caattataactttaattaatattattttcattatcctcaattcgatatattctactttgtatttataatgatgaaaaatgcaccaacacttgacaaga 1099100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 326 - 383
Target Start/End: Complemental strand, 7456657 - 7456600
Alignment:
Q  326 aattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaa 383  Q
    |||| |||||||| ||||||| ||||||||| ||||| ||| ||||||||||||||||    
T  7456657 aatttaatatattccactttatatttatgatagtggagaatacatcaatacttaacaa 7456600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 325 - 445
Target Start/End: Original strand, 48981689 - 48981809
Alignment:
Q  325 caattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctct-ttctcccagttataca 423  Q
    ||||| |||||||| ||||||||||||||||| |||||||||  | |||||| |||||||   | ||||||| |||||||| | ||||  || |||||||    
T  48981689 caatttaatatattccactttacatttatgatagtggataatataccaatacataacaagtgcatttaaaactatttttctttcttct-tcatttataca 48981787  T
Q  424 tttttcttaatatatgtgaaat 445  Q
    ||| ||||||||  ||||||||    
T  48981788 tttatcttaatacgtgtgaaat 48981809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 356
Target Start/End: Complemental strand, 3667976 - 3667920
Alignment:
Q  300 taatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    |||| ||||||||||| || | |||||||||||||||||  ||||||||||||||||    
T  3667976 taattaatattactttcatcactctcaattcaatatattctactttacatttatgat 3667920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 356
Target Start/End: Complemental strand, 6591652 - 6591584
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    ||||||||||| |||| |||||||| || |||| ||| |||||||||||||  ||||| ||||||||||    
T  6591652 caattataactataattaatattacgttcattactcttaattcaatatattctactttgcatttatgat 6591584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 435
Target Start/End: Complemental strand, 40803714 - 40803591
Alignment:
Q  311 actttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttc 410  Q
    ||||| || |||| |||||||||||| |||| |||||||||||||| ||||| ||  || ||||| |||||||| | || |||||  |||||||||| ||    
T  40803714 acttttatcattcccaattcaatataattcattttacatttatgatagtggagaaaacaccaatatttaacaagtacac-taaaattatttttctctctc 40803616  T
Q  411 tcccagttatacatttttcttaata 435  Q
       || ||||| |||||||||||||    
T  40803615 cttcatttataaatttttcttaata 40803591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 444
Target Start/End: Complemental strand, 5083506 - 5083427
Alignment:
Q  365 atgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaa 444  Q
    ||||| |||||||||||||||  ||||||||| |||||| ||||||    | |||||||||| | |||||||||||||||    
T  5083506 atgcaccaatacttaacaagagcacttaaaactatttttatctttcctttatttatacatttgttttaatatatgtgaaa 5083427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 356
Target Start/End: Complemental strand, 21412113 - 21412079
Alignment:
Q  322 tctcaattcaatatatttcactttacatttatgat 356  Q
    |||||||||||||||||| ||||||||||||||||    
T  21412113 tctcaattcaatatattttactttacatttatgat 21412079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 37157112 - 37157158
Alignment:
Q  230 gtcctaaaattacttacatatttcacttttcaatacaatattaatta 276  Q
    |||||||||| ||| |  |||||||||||||||||||||||||||||    
T  37157112 gtcctaaaataactgagctatttcacttttcaatacaatattaatta 37157158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 291 - 377
Target Start/End: Complemental strand, 46288539 - 46288453
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatact 377  Q
    |||||||| |||| |||| |||||| || | | ||||||||||||||| |||||| |||| ||||| || || ||||||| ||||||    
T  46288539 ttataactctaattaatactactttcataactttcaattcaatatattccactttgcattaatgatagtcgagaatgcattaatact 46288453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 354
Target Start/End: Complemental strand, 27242840 - 27242775
Alignment:
Q  289 aattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatg 354  Q
    |||||||||| |||| ||| ||| ||| || |||||||||||||||||||| | ||| ||||||||    
T  27242840 aattataactctaattaattttattttcatcattctcaattcaatatattttattttgcatttatg 27242775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 276
Target Start/End: Complemental strand, 28923396 - 28923347
Alignment:
Q  227 attgtcctaaaattacttacatatttcacttttcaatacaatattaatta 276  Q
    |||||| |||||| ||| || ||||||| |||||||||||||||||||||    
T  28923396 attgtcttaaaataactgacttatttcatttttcaatacaatattaatta 28923347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Complemental strand, 7426026 - 7425998
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  7426026 atttcacttttcaatacaatattaattac 7425998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Original strand, 11616521 - 11616549
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  11616521 atttcacttttcaatacaatattaattac 11616549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 245 - 277
Target Start/End: Complemental strand, 29997180 - 29997148
Alignment:
Q  245 acatatttcacttttcaatacaatattaattac 277  Q
    |||||||||| ||||||||||||||||||||||    
T  29997180 acatatttcatttttcaatacaatattaattac 29997148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 356
Target Start/End: Original strand, 30462656 - 30462724
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    ||||||||||| |||| |||| || ||| || | |||||||||||||||||  | ||||||||||||||    
T  30462656 caattataactctaattaatactaatttcatcactctcaattcaatatattatattttacatttatgat 30462724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Complemental strand, 39343818 - 39343790
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  39343818 atttcacttttcaatacaatattaattac 39343790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Complemental strand, 40023873 - 40023845
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  40023873 atttcacttttcaatacaatattaattac 40023845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Original strand, 48981339 - 48981367
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  48981339 atttcacttttcaatacaatattaattac 48981367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 9e-31; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 291 - 447
Target Start/End: Original strand, 31265778 - 31265934
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| ||||||||||| |  | |  |||||||||||||| ||||||||||||||||| ||||| |||||| |||||||||||||||  |||    
T  31265778 ttataactctaattaatattactttcacaacttccaattcaatatattccactttacatttatgatagtggagaatgcaccaatacttaacaagagcact 31265877  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataa 447  Q
    |||||| |||||||||| ||   || |||||||||| ||||||||| ||||||||||    
T  31265878 taaaactatttttctctctccttcatttatacatttgtcttaatatgtgtgaaataa 31265934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 295 - 459
Target Start/End: Complemental strand, 7739622 - 7739458
Alignment:
Q  295 aactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaa 394  Q
    |||| |||| |||| |||||| || |||||||||||||||| ||  ||||||||||||| ||  |||  |||||||||||||||||||| || | || ||    
T  7739622 aactctaattaatactacttttatcattctcaattcaatatcttctactttacatttataataatggtgaatgcatcaatacttaacaaaaacattttaa 7739523  T
Q  395 acaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaatggttca 459  Q
    || |||||||| | |||  || |||||||||||||||| || ||||||||| |||||||| ||||    
T  7739522 actatttttctatctctttcacttatacatttttcttattacatgtgaaatgagcaaatgattca 7739458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 322 - 454
Target Start/End: Complemental strand, 14312725 - 14312593
Alignment:
Q  322 tctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttata 421  Q
    ||||||||||||| |||||||||||||||||||||  |||| |||||| ||||||||||||| || ||||||||| |||||||| | ||   || ||||     
T  14312725 tctcaattcaatacatttcactttacatttatgataatggagaatgcaccaatacttaacaaaaacacttaaaaccatttttctatgtccttcatttatg 14312626  T
Q  422 catttttcttaatatatgtgaaataagcaaatg 454  Q
    ||||||| ||||||  | |||||||||||||||    
T  14312625 catttttattaatacttatgaaataagcaaatg 14312593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 291 - 449
Target Start/End: Complemental strand, 7301188 - 7301032
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||  ||||||||||| || ||| ||||||||||||||| |||||||||||||||||  |||| ||||||  ||||||||||||  | |||    
T  7301188 ttataactctaactaatattactttcatcattttcaattcaatatattccactttacatttatgataatggagaatgcacaaatacttaacaaacacact 7301089  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagc 449  Q
    |||||| |||||||||  ||    | |||||||||||||||||||  ||||||||||||    
T  7301088 taaaactatttttctc--tcatttatttatacatttttcttaatacgtgtgaaataagc 7301032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 291 - 445
Target Start/End: Original strand, 15081422 - 15081576
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| |||| |||||| || |||  |||||||||||||| |||||||| |||||||| ||||| ||||||  |||||||||||||   |||    
T  15081422 ttataactctaattaatactactttcataatttccaattcaatatattccactttacgtttatgatagtggagaatgcacaaatacttaacaagtgcact 15081521  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    |||||| ||||||||||  |   || |||||||||||||||||||  ||||||||    
T  15081522 taaaactatttttctctcaccttcatttatacatttttcttaatacgtgtgaaat 15081576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 245 - 403
Target Start/End: Original strand, 31723450 - 31723605
Alignment:
Q  245 acatatttcacttttcaatacaatattaattacnnnnnnnnnncaattataactttaatcaatattactttaattattctcaattcaatatatttcactt 344  Q
    |||||||||||||||||||||||||||||||||          ||||||||| | |||| ||||||| ||| |||||||||||||||||||||| || ||    
T  31723450 acatatttcacttttcaatacaatattaattacttttttt---caattataattataattaatattattttcattattctcaattcaatatattccaatt 31723546  T
Q  345 tacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaattttt 403  Q
    || |||||||||| |  | ||||||| ||||||| | || || ||||||||| ||||||    
T  31723547 tatatttatgatgataaagaatgcattaatacttgataaaaacacttaaaactattttt 31723605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 291 - 445
Target Start/End: Complemental strand, 3604708 - 3604554
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| ||||||||||| |  | |  |||||||||||||| |||||| ||||||  ||  |||| |||||| |||||||||||||||  |||    
T  3604708 ttataactctaattaatattactttcacaacttccaattcaatatattccactttgcatttacaataatggagaatgcaccaatacttaacaagagaact 3604609  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    |||||| |||||||||| |||   | |||||||||| ||||||||| ||||||||    
T  3604608 taaaaccatttttctctctcttttatttatacatttgtcttaatatgtgtgaaat 3604554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 324 - 445
Target Start/End: Original strand, 4238453 - 4238572
Alignment:
Q  324 tcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttataca 423  Q
    ||||||||||| ||||||||||||||||||||| ||| | |||||| |||||||||||||||  ||||||||| || ||||||  |||  || |||||||    
T  4238453 tcaattcaatagatttcactttacatttatgatagtgaagaatgcaccaatacttaacaagagcacttaaaactatatttctc--tctttcatttataca 4238550  T
Q  424 tttttcttaatatatgtgaaat 445  Q
    ||| |||| |||| ||||||||    
T  4238551 tttatcttgatatgtgtgaaat 4238572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 291 - 445
Target Start/End: Original strand, 33109372 - 33109526
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| |||| |||||| || |||||||||||||||||||||| |||||||| | ||| ||||| ||||||  |||| ||||||||   | |    
T  33109372 ttataactctaattaatactactttcatcattctcaattcaatatatttcattttacattaacgatagtggagaatgcacaaatatttaacaagtgcatt 33109471  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    |||||| |||||||||| ||   ||  ||||||||||||||||||  ||||||||    
T  33109472 taaaactatttttctctctcattcatctatacatttttcttaatacgtgtgaaat 33109526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 322 - 454
Target Start/End: Complemental strand, 14306318 - 14306186
Alignment:
Q  322 tctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttata 421  Q
    |||||||| |||| |||||||||||||||||||||  |||| |||||| ||||||||||||| || ||||||||| |||||||| | ||   || ||||     
T  14306318 tctcaatttaatacatttcactttacatttatgataatggagaatgcaccaatacttaacaaaaacacttaaaaccatttttctatgtccttcatttatg 14306219  T
Q  422 catttttcttaatatatgtgaaataagcaaatg 454  Q
    | ||||| ||||||  | |||||||||||||||    
T  14306218 ctttttttttaatacttatgaaataagcaaatg 14306186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 291 - 445
Target Start/End: Complemental strand, 9755255 - 9755101
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| ||||||| ||| || ||| |||||||||||||||  ||| |||||||||||| ||||| |||| | |||||||||||| |   |||    
T  9755255 ttataactgtaattaatattattttcatcattttcaattcaatatattctactctacatttatgatagtggagaatgtaccaatacttaacacgtgaact 9755156  T
Q  391 taaaacaatttttctct-ttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    |||||| |||||||||| ||||  || ||||| |||||||||||||  ||||||||    
T  9755155 taaaactatttttctctcttct-tcatttatatatttttcttaatacgtgtgaaat 9755101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 326 - 454
Target Start/End: Complemental strand, 34915886 - 34915756
Alignment:
Q  326 aattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcc--cagttataca 423  Q
    ||||||||||||| |||||| ||||||||||  |||| |||||| |||||||||||   || ||||||||  |||| ||||| ||||   |  |||||||    
T  34915886 aattcaatatattccactttgcatttatgataatggagaatgcaccaatacttaacgtaaacacttaaaatcatttctctctctctctttcgtttataca 34915787  T
Q  424 tttttcttaatatatgtgaaataagcaaatg 454  Q
    |||||||||||||||||||||| ||||||||    
T  34915786 tttttcttaatatatgtgaaatgagcaaatg 34915756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 291 - 447
Target Start/End: Complemental strand, 30064057 - 30063901
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| ||||||||||| || | || |||||||||||||| |||||| ||||||| || ||||| ||| ||  ||||||||| || |  |||    
T  30064057 ttataactctaattaatattactttcatcactcccaattcaatatattccactttgcatttataatagtggagaatacacaaatacttaataaaagcact 30063958  T
Q  391 taaaacaatttttctctttctcc--cagttatacatttttcttaatatatgtgaaataa 447  Q
    ||||||  ||||| |||||||||  || ||||||||||| ||||||||  |||||||||    
T  30063957 taaaac--tttttttctttctccttcatttatacattttccttaatatgcgtgaaataa 30063901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 290 - 432
Target Start/End: Original strand, 26356267 - 26356409
Alignment:
Q  290 attataactttaatcaatattactttaatta-ttctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaata 388  Q
    |||||||||||||| |||| |||||| || | |||| |||||||||||||||||||| ||||||||||| ||   ||| ||  ||||||| |||||| ||    
T  26356267 attataactttaattaatactactttcatcacttct-aattcaatatatttcactttgcatttatgatgatgacaaatacactaatacttgacaagagta 26356365  T
Q  389 cttaaaacaatttttctctttctcccagttatacatttttctta 432  Q
     ||| ||| |||||||||| || | |  ||||||||||||||||    
T  26356366 tttataaccatttttctctatcactcctttatacatttttctta 26356409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 300 - 406
Target Start/End: Original strand, 117087 - 117193
Alignment:
Q  300 taatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaat 399  Q
    |||| |||| |||||| || | ||||||||||||||||| ||||||  |||||||||  |||| |||||| ||||  ||||||||| | |||||||| ||    
T  117087 taattaatactactttcatcactctcaattcaatatattccactttgtatttatgatcatggagaatgcaccaatttttaacaagagtccttaaaaccat 117186  T
Q  400 ttttctc 406  Q
    |||||||    
T  117187 ttttctc 117193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 288 - 455
Target Start/End: Complemental strand, 33921580 - 33921413
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaat 387  Q
    ||||||||||| |||| |||| |||||| |  | || ||||||||||||||  ||||||||||||||||   | | |||| | |||||||||||||  |     
T  33921580 caattataactctaattaatactacttttacaactcccaattcaatatattctactttacatttatgataaagaagaatggaccaatacttaacaaacac 33921481  T
Q  388 acttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaatgg 455  Q
    ||| ||||| |||||||||| ||   || | ||| |||||||||||||  || ||||| |||||||||    
T  33921480 actcaaaaccatttttctctctccttcactaatatatttttcttaataagtgcgaaatgagcaaatgg 33921413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Complemental strand, 2310435 - 2310407
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  2310435 atttcacttttcaatacaatattaattac 2310407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Original strand, 4552862 - 4552890
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  4552862 atttcacttttcaatacaatattaattac 4552890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 356
Target Start/End: Complemental strand, 8232421 - 8232354
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    ||||||||| | |||| |||| |||||| |  | |||||||||||||||||| ||||||||||||||||    
T  8232421 caattataattctaattaatagtactttcacaagtctcaattcaatatattt-actttacatttatgat 8232354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Complemental strand, 9755293 - 9755265
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  9755293 atttcacttttcaatacaatattaattac 9755265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Original strand, 15081383 - 15081411
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  15081383 atttcacttttcaatacaatattaattac 15081411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 356
Target Start/End: Complemental strand, 33018055 - 33017987
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    ||||||||||| |||| |||| |||||| |  | || ||||||||||||||  ||||||||||||||||    
T  33018055 caattataactctaattaatactactttcaccactcccaattcaatatattctactttacatttatgat 33017987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 356
Target Start/End: Complemental strand, 34803818 - 34803750
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    ||||||||||| |||| |||| |||||| |  | |||||||||||||||||| | ||| ||||||||||    
T  34803818 caattataactataattaatactactttcacaactctcaattcaatatattttattttgcatttatgat 34803750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 3e-27; HSPs: 70)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 291 - 445
Target Start/End: Original strand, 12653686 - 12653840
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| | || ||||||||||| || ||||||||||||||||||| |||||||||||||| || |||||||||||| ||||| |||||||    |||    
T  12653686 ttataactctgattaatattactttcatcattctcaattcaatatattccactttacatttataatagtggataatgcaccaatatttaacaaacgcact 12653785  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    |||||| |||||||||| |    || |||||||||||||||||||  ||||||||    
T  12653786 taaaactatttttctctctacttcatttatacatttttcttaatacgtgtgaaat 12653840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 288 - 462
Target Start/End: Complemental strand, 42412494 - 42412320
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaat 387  Q
    |||||||| || |||| |||| |||||| || | || |||||||||||||| |||||| ||||||||||  |||| |||||| |||||  | ||||||      
T  42412494 caattatagctctaattaatactactttcatcactcccaattcaatatattccactttgcatttatgataatggagaatgcaccaatatatgacaagagc 42412395  T
Q  388 acttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaatggttcactt 462  Q
    ||||||||| |||||||||| ||   || |||||||||||||||||||| |||||||| ||||||||| ||||||    
T  42412394 acttaaaactatttttctctctcattcacttatacatttttcttaatatgtgtgaaatgagcaaatggctcactt 42412320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 291 - 445
Target Start/End: Complemental strand, 44790530 - 44790376
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| |||| |||||| |  |||| |||||||||||||| ||||||||||||||||| ||||| |||||| ||||||||||||||   |||    
T  44790530 ttataactctaattaatactactttcaccattcccaattcaatatattccactttacatttatgatagtggagaatgcaccaatacttaacaagtgcact 44790431  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    |||||| |||||||||| ||   || |||||||||| ||||||||  ||||||||    
T  44790430 taaaactatttttctctctccttcatttatacatttgtcttaatacgtgtgaaat 44790376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 292 - 445
Target Start/End: Complemental strand, 31410715 - 31410562
Alignment:
Q  292 tataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatactt 391  Q
    |||||||||||| |||| |||||| |||| ||| ||||||||||||| |||||| |||||||||| ||| |||||||| ||||| ||||||| || ||||    
T  31410715 tataactttaattaatactactttcattactcttaattcaatatattccactttgcatttatgatagtgtataatgcaccaatatttaacaaaaacactt 31410616  T
Q  392 aaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    |||||  ||||||||| ||   || ||||  |||||||||||||| ||||||||    
T  31410615 aaaactgtttttctctctccttcatttattaatttttcttaatatgtgtgaaat 31410562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 291 - 435
Target Start/End: Original strand, 28802766 - 28802910
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| |||| || ||| || | ||||||||||||||||| |||||| |||||||||| ||||| |||  |||||||||||||||||  |||    
T  28802766 ttataactctaattaataatattttcatcactctcaattcaatatattccactttgcatttatgatagtggagaatagatcaatacttaacaagagcact 28802865  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaata 435  Q
    |||||| |||||||||| |||  || |||||||||| ||||||||    
T  28802866 taaaaccatttttctctctctttcatttatacatttgtcttaata 28802910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 291 - 445
Target Start/End: Complemental strand, 38252546 - 38252391
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| ||||||||| |||||| || |||  |||||||||||||| ||||||||||||||||  ||||| ||||||  |||||||||||||   |||    
T  38252546 ttataactctaatcaatactactttcatcatttccaattcaatatattccactttacatttatgacagtggagaatgcactaatacttaacaagtgcact 38252447  T
Q  391 taaaacaatttttctctttctcc--cagttatacatttttcttaatatatgtgaaat 445  Q
    |||||| |||||| ||| |||||  || |||||||||||||||||||  ||||||||    
T  38252446 taaaactattttt-tctctctccttcatttatacatttttcttaatacgtgtgaaat 38252391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 291 - 455
Target Start/End: Original strand, 5392048 - 5392212
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| |||| |||||| |  | || |||||||||||||| |||||| |||||||||| ||||| |||||| |||||||| |||| |  |||    
T  5392048 ttataactctaattaatactactttcaacactcccaattcaatatattccactttgcatttatgatagtggagaatgcaccaatacttgacaaaagcact 5392147  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaatgg 455  Q
    |||||| |||||||||| ||   || |||||||||| ||||||||  |||||||| |||||||||    
T  5392148 taaaaccatttttctctctccttcatttatacatttgtcttaataggtgtgaaatgagcaaatgg 5392212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 291 - 407
Target Start/End: Original strand, 39171542 - 39171658
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| |||| || ||| || | || |||||||||||||| |||||| |||||||||| || ||||||||||||||||||||||| | ||||    
T  39171542 ttataactctaattaatactattttcatcactcacaattcaatatattccactttgcatttatgatagtagataatgcatcaatacttaacaaaagtact 39171641  T
Q  391 taaaacaatttttctct 407  Q
    |||||| ||||||||||    
T  39171642 taaaaccatttttctct 39171658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 291 - 407
Target Start/End: Original strand, 45425484 - 45425600
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| ||||||||||| || ||||  |||| |||||||| |||||| |||||||||| ||||| ||||||||||||||||||||||  |||    
T  45425484 ttataactctaattaatattactttcatcattcctaatttaatatattccactttgcatttatgatagtggaaaatgcatcaatacttaacaagagcact 45425583  T
Q  391 taaaacaatttttctct 407  Q
    |||||| |||| |||||    
T  45425584 taaaaccatttgtctct 45425600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 291 - 445
Target Start/End: Complemental strand, 32967385 - 32967231
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| |||| |||||| || ||||||||||||||||||| ||||||| ||||||||| ||||| |||| | |||||||||| |||   |||    
T  32967385 ttataactctaattaatactactttcatcattctcaattcaatatattccactttaaatttatgatagtggagaatggaccaatacttaagaagtgcact 32967286  T
Q  391 taaaacaatttttctct-ttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    |||||| |||||||||| ||||  || ||||||||||| |||||||  ||||||||    
T  32967285 taaaactatttttctctcttct-tcatttatacattttacttaatacgtgtgaaat 32967231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 291 - 445
Target Start/End: Original strand, 29615797 - 29615951
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    ||||||||||||| |||| |||||| || |||| |||||||||||||| ||||||||||||||||  ||||| | | || ||||||||||||||   | |    
T  29615797 ttataactttaattaatactactttcatcattcccaattcaatatattccactttacatttatgacagtggaaagtacaccaatacttaacaagtgcatt 29615896  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    |||||  |||||||||| ||   || |||||||||||||||||||  ||||||||    
T  29615897 taaaattatttttctctctccttcatttatacatttttcttaatacgtgtgaaat 29615951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 324 - 445
Target Start/End: Complemental strand, 22325030 - 22324909
Alignment:
Q  324 tcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttataca 423  Q
    ||||||||||||||| ||||||||||||||||| ||||| ||||||  |||| |||||||| | ||||||||  |||||||||| ||   || |||||||    
T  22325030 tcaattcaatatattccactttacatttatgatagtggaaaatgcactaatatttaacaagtacacttaaaattatttttctctctccttcatttataca 22324931  T
Q  424 tttttcttaatatatgtgaaat 445  Q
    ||||||||||||  ||||||||    
T  22324930 tttttcttaatacttgtgaaat 22324909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 248 - 444
Target Start/End: Complemental strand, 32241572 - 32241379
Alignment:
Q  248 tatttcacttttcaatacaatattaattacnnnnnnnnnncaattataactttaatcaatattactttaattattctcaattcaatatatttcactttac 347  Q
    ||||||||||||||||||||||||||||||          |  |||||||| |||| ||||||||||| |  | |  ||||||| |||||| |||||| |    
T  32241572 tatttcacttttcaatacaatattaattac---ttttttccctttataactctaattaatattactttcacaacttccaattcattatattccactttgc 32241476  T
Q  348 atttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaa 444  Q
    ||||||||| ||| | ||||||||||||||||||||||| ||||||||  |||||| ||| ||   || |||||||||| ||||||||| |||||||    
T  32241475 atttatgatagtgaagaatgcatcaatacttaacaagaacacttaaaatcatttttatctctccttcatttatacatttgtcttaatatgtgtgaaa 32241379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 291 - 447
Target Start/End: Complemental strand, 5962581 - 5962425
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| ||||||| ||| || | || |||||||||||||| |||||| ||||||| || ||||| |||||| ||||||||||||| |  |||    
T  5962581 ttataactctaattaatattaatttcatcactcccaattcaatatattccactttgcatttataatagtggagaatgcaccaatacttaacaaaagcact 5962482  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataa 447  Q
    ||||||  ||||||| | ||   || ||||||||||| |||||||| ||||||||||    
T  5962481 taaaacgttttttctatctccttcatttatacattttccttaatatgtgtgaaataa 5962425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 288 - 452
Target Start/End: Complemental strand, 27868436 - 27868272
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaat 387  Q
    ||||||||| |||||| |||| |||||| || |||||||||||||||||||  ||||| ||||||||||  ||   |||| |||||||||| |||||||     
T  27868436 caattataattttaattaatactactttcatcattctcaattcaatatattctactttgcatttatgataatgataaatggatcaatacttgacaagaac 27868337  T
Q  388 acttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaa 452  Q
    || |||||| |||||||||  ||   || | |||||||||||||||||  |||||||| ||||||    
T  27868336 acgtaaaaccatttttctccatcattcactaatacatttttcttaataagtgtgaaatgagcaaa 27868272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 325 - 444
Target Start/End: Complemental strand, 33190983 - 33190864
Alignment:
Q  325 caattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctct-ttctcccagttataca 423  Q
    |||||||||||||| |||| | |||||||||| ||||| ||||||| ||||||||||||||| ||||||||  |||||||||| ||||  || |||||||    
T  33190983 caattcaatatattccactatgcatttatgatagtggagaatgcattaatacttaacaagaacacttaaaatcatttttctctcttct-tcatttataca 33190885  T
Q  424 tttttcttaatatatgtgaaa 444  Q
    ||| ||||||||| |||||||    
T  33190884 tttgtcttaatatgtgtgaaa 33190864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 291 - 445
Target Start/End: Original strand, 2349349 - 2349504
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| ||||||||||| |  |||  |||||||||||||| || |||||||||||||| ||||| ||||||  ||||||||||||    |||    
T  2349349 ttataactctaattaatattactttcaacatttccaattcaatatattccaatttacatttatgatagtggagaatgcacaaatacttaacaaatgcact 2349448  T
Q  391 taaaacaatttttctctttctcc--cagttatacatttttcttaatatatgtgaaat 445  Q
    |||||| |||||| ||| |||||  || |||||||||||| |||||| |||||||||    
T  2349449 taaaactattttt-tctctctccttcatttatacattttttttaatacatgtgaaat 2349504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 249 - 407
Target Start/End: Original strand, 45197571 - 45197727
Alignment:
Q  249 atttcacttttcaatacaatattaattacnnnnnnnnnncaattataactttaatcaatattactttaattattctcaattcaatatatttcactttaca 348  Q
    |||||||||||||||||||||||||||||           ||||||| || |||| |||| || ||| || | |||||||||||||||||||| ||||||    
T  45197571 atttcacttttcaatacaatattaattacttttatta---aattatagctctaattaatagtaatttcatcactctcaattcaatatatttcattttaca 45197667  T
Q  349 tttatgatggtggataatgcatcaatacttaacaagaatacttaaaa-caatttttctct 407  Q
    |||||||  ||| | |||||||||||||||||||| || |||||||| || |||||||||    
T  45197668 tttatgacagtgaagaatgcatcaatacttaacaaaaacacttaaaatcattttttctct 45197727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 300 - 454
Target Start/End: Original strand, 139030 - 139184
Alignment:
Q  300 taatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaat 399  Q
    |||| |||| || ||| |||| || ||||||| |||||| |||||| |||||||||| | ||| |||||| |||||||||||||||  | ||||||  ||    
T  139030 taattaatactaatttcattactcacaattcattatattccactttgcatttatgatagcggaaaatgcaccaatacttaacaagagaatttaaaatcat 139129  T
Q  400 ttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaatg 454  Q
    |||| ||| ||   || |||||||||||||||||||| |||||||| || |||||    
T  139130 ttttatctctcattcatttatacatttttcttaatatgtgtgaaatgagtaaatg 139184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 245 - 454
Target Start/End: Original strand, 3384488 - 3384698
Alignment:
Q  245 acatatttcacttttcaatacaatattaattacnnnnnnnnnncaattataactttaatcaata---ttactttaattattctcaattcaatatatttca 341  Q
    ||||||||||||||| |||||||||||||||||          |||||||||||||||| ||||   ||||||| || | | |||||||||||||||  |    
T  3384488 acatatttcactttttaatacaatattaattactttttt----caattataactttaattaataatattactttcatcactttcaattcaatatattcaa 3384583  T
Q  342 ctttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcc--cagttatacatttttcttaatatatg 439  Q
    |||| |||||||||| ||| | |||  | |||||| |||||||| || |||| || |||||||||| ||| |  || |||||||||||||||||||| ||    
T  3384584 ctttgcatttatgatagtgaagaatataccaatacataacaagagtatttaataccatttttctctctcttcttcatttatacatttttcttaatatgtg 3384683  T
Q  440 tgaaataagcaaatg 454  Q
    | |||| | ||||||    
T  3384684 taaaatgaacaaatg 3384698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 291 - 407
Target Start/End: Original strand, 34133126 - 34133242
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    ||||||||  ||| ||||||||||| || ||   ||||||||||||||||| |||||||||||||| ||||| |||||  ||||||||||||||   |||    
T  34133126 ttataactccaattaatattactttcatcatatccaattcaatatatttcattttacatttatgatagtggagaatgcgccaatacttaacaagtgcact 34133225  T
Q  391 taaaacaatttttctct 407  Q
    |||||  ||||||||||    
T  34133226 taaaattatttttctct 34133242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 288 - 444
Target Start/End: Original strand, 2195464 - 2195620
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaat 387  Q
    ||||||||||| |||| |||| |||||| || | || ||||||||||||||  ||||| ||||||||||     | |||||| |||||||||||||| |     
T  2195464 caattataactctaattaatactactttcatcactcccaattcaatatattctactttgcatttatgataagaaagaatgcaccaatacttaacaag-ac 2195562  T
Q  388 acttaaaacaatttttctctttctcccagttataca-tttttcttaatatatgtgaaa 444  Q
    ||| ||||| |||||||||| |||  || ||||||| ||||||||||||| |||||||    
T  2195563 actcaaaactatttttctctctctttcacttatacactttttcttaatatgtgtgaaa 2195620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 290 - 447
Target Start/End: Original strand, 26677067 - 26677229
Alignment:
Q  290 attataactttaatcaatattactttaattattctcaattcaat----atatttcactttacatttatgatggtggataatgcatcaatacttaacaaga 385  Q
    |||||||||||||| ||||||| ||| || | ||| ||||||||    |||||  ||||| ||||||||||  |||  |||||| ||||| || ||||      
T  26677067 attataactttaattaatattaatttcatcactcttaattcaatttatatattctactttgcatttatgataatggtgaatgcaccaatattttacaatg 26677166  T
Q  386 atacttaaaacaa-tttttctctttctcccagttatacatttttcttaatatatgtgaaataa 447  Q
    | ||||||||||| ||||||||| |||  || |||||||||||||||||||| ||||||||||    
T  26677167 acacttaaaacaaatttttctctctctttcacttatacatttttcttaatatgtgtgaaataa 26677229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 325 - 453
Target Start/End: Complemental strand, 29730972 - 29730840
Alignment:
Q  325 caattcaatatat-ttc-actttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttatac 422  Q
    ||||||||||||| ||| ||||| |||||||||| ||||| |||||| |||||||||||||||| ||||||||| | |||||||| ||   || |||||     
T  29730972 caattcaatatatattctactttgcatttatgatagtggagaatgcaccaatacttaacaagaacacttaaaaccacttttctctctccttcatttatat 29730873  T
Q  423 a--tttttcttaatatatgtgaaataagcaaat 453  Q
    |  |||||||||||| |||| |||| |||||||    
T  29730872 atttttttcttaatacatgtaaaatgagcaaat 29730840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 288 - 452
Target Start/End: Complemental strand, 7258478 - 7258314
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaat 387  Q
    ||||||||||| |||| |||| |||||| || | || ||||||||||||||  | ||| ||||||||||  ||   |||||| |||||||| ||||||      
T  7258478 caattataactctaattaatactactttcatcactcccaattcaatatattctagtttgcatttatgataatgataaatgcaccaatacttgacaagagc 7258379  T
Q  388 acttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaa 452  Q
     |||||||| |||||||||||||   || | ||| |||||| ||||||  |||||||||||||||    
T  7258378 gcttaaaaccatttttctctttccttcattaatatattttttttaataagtgtgaaataagcaaa 7258314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 288 - 356
Target Start/End: Original strand, 33826227 - 33826295
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    ||||||||||| ||||||||| |||||| || |||||||||||||||||||   |||||||||||||||    
T  33826227 caattataactctaatcaatactactttcatcattctcaattcaatatattctgctttacatttatgat 33826295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 295 - 407
Target Start/End: Complemental strand, 42558685 - 42558573
Alignment:
Q  295 aactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaa 394  Q
    |||| |||| |||| |||||| || | ||| ||||||||||||| |||||| |||||||||| ||||| |||  | |||||||||||||||| | |||||    
T  42558685 aactctaattaatactactttcatcactcttaattcaatatattccactttgcatttatgatagtggagaataaaccaatacttaacaagaacaattaaa 42558586  T
Q  395 acaatttttctct 407  Q
    || |||| |||||    
T  42558585 accatttatctct 42558573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 291 - 403
Target Start/End: Complemental strand, 44615473 - 44615361
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| ||||||| ||| || | |||||||||||||||||  ||||| ||||||| || ||||| ||| || ||||||||||||| || |||    
T  44615473 ttataactctaattaatattattttcatcactctcaattcaatatattctactttgcatttataatagtggagaattcaccaatacttaacaaaaacact 44615374  T
Q  391 taaaacaattttt 403  Q
    | ||||| |||||    
T  44615373 tcaaacatttttt 44615361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 288 - 383
Target Start/End: Complemental strand, 8418413 - 8418318
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaa 383  Q
    ||||||||||| |||| |||| |||||| || | |||||||||| ||||||  ||||||||||||||||   | ||||||||||||||||| ||||    
T  8418413 caattataactctaattaatactactttcatcactctcaattcagtatattctactttacatttatgataaagaataatgcatcaatacttgacaa 8418318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 249 - 356
Target Start/End: Original strand, 2796999 - 2797104
Alignment:
Q  249 atttcacttttcaatacaatattaattacnnnnnnnnnncaattataactttaatcaatattactttaattattctcaattcaatatatttcactttaca 348  Q
    ||||||||||||||||||||||||||||           ||||||||||| |||| ||||||||||| |||| || ||||||||||||||  ||||| ||    
T  2796999 atttcacttttcaatacaatattaatta--tttttttaccaattataactctaattaatattactttcattactcccaattcaatatattctactttgca 2797096  T
Q  349 tttatgat 356  Q
    ||||||||    
T  2797097 tttatgat 2797104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 349 - 454
Target Start/End: Complemental strand, 4480519 - 4480415
Alignment:
Q  349 tttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataag 448  Q
    ||||||||  |||| |||||| |||||| |||||| | || |||||| | ||||||||| |||  || |||||||||||||||||||||||| |||| ||    
T  4480519 tttatgatactggagaatgcaccaatacataacaaaagtatttaaaata-tttttctctctctttcatttatacatttttcttaatatatgttaaatgag 4480421  T
Q  449 caaatg 454  Q
    ||||||    
T  4480420 caaatg 4480415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 334 - 407
Target Start/End: Original strand, 9014745 - 9014818
Alignment:
Q  334 atatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctct 407  Q
    ||||| |||||| |||||||||| ||||| |||||||||||||||||||| |  ||||||||  ||||||||||    
T  9014745 atattccactttgcatttatgatagtggagaatgcatcaatacttaacaaaagcacttaaaatcatttttctct 9014818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 288 - 445
Target Start/End: Original strand, 29638297 - 29638454
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaat 387  Q
    ||||||||||| |||| ||||||||||| |  | ||  |||||||||||||  ||||||||||||||||   | |||||| | |||||||| ||||        
T  29638297 caattataactctaattaatattactttcaccactcctaattcaatatattatactttacatttatgataaagaataatgaaccaatacttgacaaaggc 29638396  T
Q  388 acttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    | | ||||| ||||||||||||||  || ||||||| |||||||||| | ||||||||    
T  29638397 attcaaaaccatttttctctttctttcatttatacacttttcttaatctgtgtgaaat 29638454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 249 - 356
Target Start/End: Complemental strand, 886595 - 886491
Alignment:
Q  249 atttcacttttcaatacaatattaattacnnnnnnnnnncaattataactttaatcaatattactttaattattctcaattcaatatatttcactttaca 348  Q
    |||||||||||||||||||||||||||||          ||||||||||  |||| ||||||||||| || ||||||||||| |||||||  ||||| ||    
T  886595 atttcacttttcaatacaatattaattacttttttt---caattataacactaattaatattacttttatcattctcaattcgatatattctactttgca 886499  T
Q  349 tttatgat 356  Q
    ||||||||    
T  886498 tttatgat 886491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 293 - 377
Target Start/End: Original strand, 18725910 - 18725994
Alignment:
Q  293 ataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatact 377  Q
    ||||||||||| ||||||||||| |||| ||| |||| ||||||||  ||||||||||||| ||  || | ||||||||||||||    
T  18725910 ataactttaattaatattactttcattactcttaattaaatatattctactttacatttataataatgaaaaatgcatcaatact 18725994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 288 - 379
Target Start/End: Complemental strand, 1230473 - 1230383
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatactta 379  Q
    |||||||||||||||| ||||||| ||  || | |||||||||||||||||  ||||| ||||||||||  |||| |||||| |||||||||    
T  1230473 caattataactttaattaatattatttccatcactctcaattcaatatattctactttgcatttatgataatgga-aatgcaccaatactta 1230383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 445
Target Start/End: Complemental strand, 138793 - 138654
Alignment:
Q  305 aatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttc 404  Q
    ||||||||||| || |||   ||||||||||||| |||||| |||||||||| |  || ||| || |||||| |||||| || ||||||||  |||||||    
T  138793 aatattactttcatcattactaattcaatatattccactttgcatttatgatagaagaaaatccaccaatacataacaaaaacacttaaaatcatttttc 138694  T
Q  405 tctttctcccagttataca-tttttcttaatatatgtgaaat 445  Q
    ||||  |  || ||||||| ||||||||||| ||||||||||    
T  138693 tcttctt--catttatacattttttcttaatgtatgtgaaat 138654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 288 - 462
Target Start/End: Original strand, 3442479 - 3442652
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaat 387  Q
    ||||||||||| |||| |||| || ||| || ||| |||||||||||| ||||| ||||  ||||||||  ||   ||| ||||||||||||    |||     
T  3442479 caattataactctaattaatactattttcatcattttcaattcaatatctttcaatttatgtttatgataatgatgaatacatcaatacttattt-gaac 3442577  T
Q  388 acttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaatggttcactt 462  Q
    | ||| ||| |||||| ||||||   || ||||||||||||||||| || |||||||| |||||||| |||||||    
T  3442578 aattataaccatttttttctttccttcacttatacatttttcttaacatgtgtgaaatgagcaaatgattcactt 3442652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 302 - 396
Target Start/End: Original strand, 21587287 - 21587381
Alignment:
Q  302 atcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaac 396  Q
    ||||||| |||||| || | || |||||||||||||| |||||| ||||| | |  ||||| |||||| |||||||||||||||  |||||||||    
T  21587287 atcaatactactttcatcactcccaattcaatatattccactttgcatttctaacagtggagaatgcaccaatacttaacaagagcacttaaaac 21587381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 288 - 378
Target Start/End: Original strand, 32679031 - 32679121
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatactt 378  Q
    ||||||||||| |||| |||| |||||| |  | |||||||| ||||||||| ||||||||||||||||   | |||||||| ||||||||    
T  32679031 caattataactctaattaatactacttttacaactctcaatttaatatattttactttacatttatgataaagaataatgcaccaatactt 32679121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 356
Target Start/End: Complemental strand, 4274407 - 4274342
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    |||||||| |||| ||||||| ||| |  | |||||||||||||||||||||||| ||||||||||    
T  4274407 ttataactctaattaatattattttcaccactctcaattcaatatatttcactttgcatttatgat 4274342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 326 - 443
Target Start/End: Complemental strand, 15559203 - 15559086
Alignment:
Q  326 aattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttatacatt 425  Q
    |||||||||||||  ||||| ||||||||||  |||  ||| || |||||||| ||||||| ||||||||  |||||| ||| ||   || | |||||||    
T  15559203 aattcaatatattctactttgcatttatgataatggtaaatacaccaatacttgacaagaacacttaaaatcatttttgtctctccttcactaatacatt 15559104  T
Q  426 tttcttaatatatgtgaa 443  Q
    |||||||||| |||||||    
T  15559103 tttcttaataaatgtgaa 15559086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 396
Target Start/End: Original strand, 8618124 - 8618232
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaat 387  Q
    |||||||||||||||| |||| || ||| |  | |  ||||||||||||||  | ||||||||||||||   | |||||||| ||||||||||||| ||     
T  8618124 caattataactttaattaatactatttttaccacttccaattcaatatattatattttacatttatgataaagaataatgcaccaatacttaacaaaaac 8618223  T
Q  388 acttaaaac 396  Q
    |||||||||    
T  8618224 acttaaaac 8618232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 356
Target Start/End: Complemental strand, 10729033 - 10728965
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    ||||| ||||| |||| |||| ||||||||| | || |||||||||||||| |||||| ||||||||||    
T  10729033 caattgtaactctaattaatactactttaatcactcccaattcaatatattccactttgcatttatgat 10728965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 356
Target Start/End: Original strand, 14117458 - 14117526
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    ||||||||||| |||| ||||||||||| |  | | |||||||||||||||  ||||||||||||||||    
T  14117458 caattataactctaattaatattactttcacaactttcaattcaatatattcaactttacatttatgat 14117526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 445
Target Start/End: Original strand, 7042792 - 7042907
Alignment:
Q  332 atatatttcactttacatttatgatggtggataatgcatcaatacttaa-caagaatacttaaaacaatttttctctttctcc-cagttatacatttttc 429  Q
    ||||||| |||||||||||||||||  | || |||||| |||||||||| |||||  |||||||   |||||||||||| |   || |||||||||||||    
T  7042792 atatattccactttacatttatgataatagagaatgcaccaatacttaaacaagagcacttaaattcatttttctcttttttttcatttatacatttttc 7042891  T
Q  430 ttaatatatgtgaaat 445  Q
    || |||| ||||||||    
T  7042892 ttgatatgtgtgaaat 7042907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 356
Target Start/End: Original strand, 27987655 - 27987722
Alignment:
Q  289 aattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    |||||||||| |||| |||| |||||| || | || ||||||||||||||||| ||| ||||||||||    
T  27987655 aattataactataattaatactactttcatcactcacaattcaatatatttcattttgcatttatgat 27987722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 356
Target Start/End: Original strand, 28044957 - 28045024
Alignment:
Q  289 aattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    |||||||||| |||| |||| |||||| || | || ||||||||||||||||| ||| ||||||||||    
T  28044957 aattataactataattaatactactttcatcactcacaattcaatatatttcattttgcatttatgat 28045024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 441
Target Start/End: Complemental strand, 5423276 - 5423122
Alignment:
Q  288 caattata-actttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaa 386  Q
    |||||||| ||| |||| |||| |||||| || |||||||||||||||| || ||||||  |||||||||  |||  ||| || |||| ||| ||||| |    
T  5423276 caattatacactataattaatactacttttatcattctcaattcaatatcttccactttgtatttatgataatggtaaatacaccaatgcttgacaagga 5423177  T
Q  387 tacttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtg 441  Q
     ||| ||||  |||||||||| |||  || |||| ||||| ||||||||| ||||    
T  5423176 cactcaaaatcatttttctctctctttcacttatgcatttatcttaatatgtgtg 5423122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 378
Target Start/End: Original strand, 11637140 - 11637226
Alignment:
Q  292 tataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatactt 378  Q
    ||||||| |||| |||| |||||| |  | |||||||||||||||||  ||||||||||||||||   | |||||| ||||||||||    
T  11637140 tataactataattaatactactttcaccactctcaattcaatatattctactttacatttatgataaagaataatgtatcaatactt 11637226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 356
Target Start/End: Original strand, 23764996 - 23765030
Alignment:
Q  322 tctcaattcaatatatttcactttacatttatgat 356  Q
    |||||||||||||||||| ||||||||||||||||    
T  23764996 tctcaattcaatatattttactttacatttatgat 23765030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 462
Target Start/End: Complemental strand, 27875252 - 27875079
Alignment:
Q  289 aattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaata 388  Q
    ||||||||||||||| |||| || |||    |||| ||||||||| ||||  ||||| ||||||||||  | |  |||| |||||||||| ||||||| |    
T  27875252 aattataactttaattaatactattttcgacattcccaattcaatgtattatactttgcatttatgataatagtaaatggatcaatacttgacaagaaca 27875153  T
Q  389 cttaaaacaatttttct-ctttctcccagttatacatttttcttaatatatgtgaaataagcaaatggttcactt 462  Q
     ||||||| |||||||| | ||||  || | |||||||||| |||||| ||||||||| | ||||  ||||||||    
T  27875152 tttaaaaccatttttctccattct-tcactaatacattttttttaataaatgtgaaatgaacaaaatgttcactt 27875079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 291 - 445
Target Start/End: Complemental strand, 33746327 - 33746173
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| |||| || ||| || ||| | ||||||||||||| |  |||| |||||| || ||||| | ||||  ||||||||| |||   |||    
T  33746327 ttataactataattaatactattttcatcatttttaattcaatatattcctttttatatttatcatagtggagattgcactaatacttaataagtgcact 33746228  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    |||||  |||||||| |||||  || |||||||||||| ||||||  ||||||||    
T  33746227 taaaattatttttctttttctttcatttatacattttttttaatacgtgtgaaat 33746173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 290 - 356
Target Start/End: Complemental strand, 41759739 - 41759673
Alignment:
Q  290 attataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    |||||||| ||||| ||||||||||| | || || ||||||||||||||| |||||  |||||||||    
T  41759739 attataacattaattaatattactttcactactcccaattcaatatattttactttgtatttatgat 41759673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 276
Target Start/End: Complemental strand, 17790250 - 17790217
Alignment:
Q  243 ttacatatttcacttttcaatacaatattaatta 276  Q
    |||| |||||||||||||||||||||||||||||    
T  17790250 ttacttatttcacttttcaatacaatattaatta 17790217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 355
Target Start/End: Original strand, 27571582 - 27571615
Alignment:
Q  322 tctcaattcaatatatttcactttacatttatga 355  Q
    |||||||||||||| |||||||||||||||||||    
T  27571582 tctcaattcaatatttttcactttacatttatga 27571615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 356
Target Start/End: Complemental strand, 2875197 - 2875129
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    ||||||||||| |||| |||| |||||| |||  ||| |||||||||||||  ||||| ||||||||||    
T  2875197 caattataactctaattaatactactttcattcctctaaattcaatatattctactttgcatttatgat 2875129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Original strand, 5392008 - 5392036
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  5392008 atttcacttttcaatacaatattaattac 5392036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Complemental strand, 13085098 - 13085070
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  13085098 atttcacttttcaatacaatattaattac 13085070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Original strand, 14689920 - 14689948
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  14689920 atttcacttttcaatacaatattaattac 14689948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 356
Target Start/End: Complemental strand, 14748817 - 14748749
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    ||||||||||  |||| |||| |||||| |  |||||||||||||||||||  ||||| ||||||||||    
T  14748817 caattataacactaattaatactactttcaccattctcaattcaatatattctactttgcatttatgat 14748749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 293 - 353
Target Start/End: Original strand, 18733386 - 18733446
Alignment:
Q  293 ataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttat 353  Q
    |||| |||||| |||||||||||||||| ||| |||| ||||||||  ||||| |||||||    
T  18733386 ataattttaattaatattactttaattactcttaattaaatatattctactttgcatttat 18733446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Complemental strand, 26570306 - 26570278
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  26570306 atttcacttttcaatacaatattaattac 26570278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Complemental strand, 32231867 - 32231839
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  32231867 atttcacttttcaatacaatattaattac 32231839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Complemental strand, 33191056 - 33191028
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  33191056 atttcacttttcaatacaatattaattac 33191028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 275
Target Start/End: Original strand, 33826177 - 33826221
Alignment:
Q  231 tcctaaaattacttacatatttcacttttcaatacaatattaatt 275  Q
    ||||||||| | | || ||||||||||||||||||||||||||||    
T  33826177 tcctaaaataattgacttatttcacttttcaatacaatattaatt 33826221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 436
Target Start/End: Complemental strand, 40077861 - 40077713
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaat 387  Q
    |||||||||||  ||| ||||||||||| |  | ||  |||||||||||||  ||||||||||||||||   | | |||||| |||||||| ||||  |     
T  40077861 caattataactcaaattaatattactttcacaactccaaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgacaaagac 40077762  T
Q  388 acttaaaacaatttttctctttctcccagttatacatttttcttaatat 436  Q
    ||| ||||  |||||| ||| |||  || ||||||| ||||||||||||    
T  40077761 actcaaaatcatttttttctctctttcatttatacacttttcttaatat 40077713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Original strand, 41726481 - 41726509
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  41726481 atttcacttttcaatacaatattaattac 41726509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 248 - 276
Target Start/End: Complemental strand, 42797835 - 42797807
Alignment:
Q  248 tatttcacttttcaatacaatattaatta 276  Q
    |||||||||||||||||||||||||||||    
T  42797835 tatttcacttttcaatacaatattaatta 42797807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Complemental strand, 45421087 - 45421059
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  45421087 atttcacttttcaatacaatattaattac 45421059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 3e-27; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 291 - 445
Target Start/End: Complemental strand, 39866661 - 39866507
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| ||||  ||||| || | || ||||||||| ||||||||||| |||||||||| ||||| ||| || ||||||||||||| |  |||    
T  39866661 ttataactctaattaataccactttcatcactcacaattcaatgtatttcactttgcatttatgatagtggagaatacaccaatacttaacaaaatcact 39866562  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    |||||| |||||||||||||   || |||||||||||||||||||| ||||||||    
T  39866561 taaaactatttttctctttccttcatttatacatttttcttaatatgtgtgaaat 39866507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 291 - 445
Target Start/End: Complemental strand, 54122332 - 54122178
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| ||||||||| |||||| |  | |  ||||||||||||||||||||| |||||||||| ||||| |||||| ||||||||||||| || | |    
T  54122332 ttataactctaatcaatactactttcacaacttccaattcaatatatttcactttgcatttatgatagtggagaatgcaccaatacttaacaaaaacatt 54122233  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    |||||| |||||||||| ||   || |||||||||| ||||||||| ||||||||    
T  54122232 taaaactatttttctctctccttcatttatacatttgtcttaatatgtgtgaaat 54122178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 325 - 445
Target Start/End: Original strand, 9017834 - 9017954
Alignment:
Q  325 caattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttatacat 424  Q
    ||||||||||||||||||||| ||||||| || ||||| |||||| ||||||||||||| |  ||||||||| |||||||||| |||  || ||||||||    
T  9017834 caattcaatatatttcactttgcatttataatagtggagaatgcaccaatacttaacaaaagcacttaaaactatttttctctctctttcatttatacat 9017933  T
Q  425 ttttcttaatatatgtgaaat 445  Q
    |||| ||||||| ||||||||    
T  9017934 tttttttaatatgtgtgaaat 9017954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 325 - 444
Target Start/End: Complemental strand, 43639590 - 43639471
Alignment:
Q  325 caattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttatacat 424  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||| |  ||||||||| |||||||||| ||   || ||||| ||    
T  43639590 caattcaatatatttcactttgcatttatgatagtggaaaatgcatcaatacttaacaacagcacttaaaaccatttttctctctccttcatttatatat 43639491  T
Q  425 ttttcttaatatatgtgaaa 444  Q
    || ||||||||| |||||||    
T  43639490 ttgtcttaatatgtgtgaaa 43639471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 305 - 445
Target Start/End: Original strand, 48744272 - 48744413
Alignment:
Q  305 aatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttc 404  Q
    ||||||||||| || ||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    ||||||||| ||||||     
T  48744272 aatattactttcatcattttcaattcaatatatttcactttacatttatgatagtggagaatgcatcaatacttaacaaatgcacttaaaactattttt- 48744370  T
Q  405 tctttctcc--cagttatacatttttcttaatatatgtgaaat 445  Q
    | ||||| |  || ||||||| |||||||||||  ||||||||    
T  48744371 tttttcttcttcatttatacacttttcttaatacgtgtgaaat 48744413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 226 - 454
Target Start/End: Original strand, 2868511 - 2868736
Alignment:
Q  226 tattgtcctaaaattacttacatatttcacttttcaatacaatattaattacnnnnnnnnnncaattataactttaatcaatattactttaattattctc 325  Q
    |||||||||||||| ||| |   ||||||||||||||||||||||||||||            ||||| |||| |||| ||||||||||| || | || |    
T  2868511 tattgtcctaaaataactgatccatttcacttttcaatacaatattaattatttttttct---aattacaactctaattaatattactttcatcactccc 2868607  T
Q  326 aattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttatacatt 425  Q
    ||||| || |||| |||||| |||||||||  ||||| |||||| |||||| |||||| |  ||||||||| |||||||||| ||   || |||||||||    
T  2868608 aattcgatttattccactttgcatttatgacagtggagaatgcagcaatacataacaaaagaacttaaaaccatttttctctctccttcatttatacatt 2868707  T
Q  426 tttcttaatatatgtgaaataagcaaatg 454  Q
    ||||||||||| |||||||| ||||||||    
T  2868708 tttcttaatatgtgtgaaatgagcaaatg 2868736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 291 - 445
Target Start/End: Complemental strand, 32827412 - 32827258
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| |||| |||||| || |||   ||||||||||||||||||||||||||||||| ||||| |||||| |||||| |||||||   |||    
T  32827412 ttataactctaattaatactactttcatcatttctaattcaatatatttcactttacatttatgatagtggagaatgcaccaatacgtaacaagtgcact 32827313  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    |||||| |||||| ||| ||   || |||||||||||||||||||  ||||||||    
T  32827312 taaaactatttttttctctccttcatttatacatttttcttaatacgtgtgaaat 32827258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 291 - 445
Target Start/End: Original strand, 33994656 - 33994810
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| ||||  ||||| || ||||||| ||||||||||| ||||||||||||||||| ||||| |||||| ||||||||||||||   |||    
T  33994656 ttataactctaattaataccactttcatcattctcagttcaatatattccactttacatttatgatagtggagaatgcaccaatacttaacaagtgcact 33994755  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    |||||  |||||||||| ||   || ||||||||||||||| |||  ||||||||    
T  33994756 taaaattatttttctctctccttcatttatacatttttcttgatacgtgtgaaat 33994810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 291 - 442
Target Start/End: Complemental strand, 26134811 - 26134660
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| | || |||||| || | || ||||||||||||||||||||| |||||||||| ||||| |||  |  ||||||||||||||  |||    
T  26134811 ttataactctaattagtactactttcatcactcccaattcaatatatttcactttgcatttatgatagtggagaatagactaatacttaacaagagcact 26134712  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtga 442  Q
    ||||||||||||||||| ||   || |||||||||| ||||||||| |||||    
T  26134711 taaaacaatttttctctctccttcatttatacatttgtcttaatatgtgtga 26134660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 291 - 454
Target Start/End: Complemental strand, 53876544 - 53876381
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||| | |||| ||| ||||||| || | ||||||||||||||||||||||||||||||||||| ||||| ||||||  |||| ||||||| |  |||    
T  53876544 ttataattctaattaattttactttcatcactctcaattcaatatatttcactttacatttatgatagtggaaaatgcacaaatatttaacaaaagcact 53876445  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaatg 454  Q
    |||||  |||||| ||  ||   || |||||||||||||||||||| | |||||||| ||||||    
T  53876444 taaaatcatttttttcactccttcatttatacatttttcttaatatctatgaaataaacaaatg 53876381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 249 - 405
Target Start/End: Original strand, 41031532 - 41031688
Alignment:
Q  249 atttcacttttcaatacaatattaattacnnnnnnnnnncaattataactttaatcaatattactttaattattctcaattcaatatatttcactttaca 348  Q
    |||||||||||||||||||||||||||||          || ||||||||||||| |||| |||||| || |||  ||||||||||||||||||||||||    
T  41031532 atttcacttttcaatacaatattaattacttttttc---catttataactttaattaatactactttcatcatttccaattcaatatatttcactttaca 41031628  T
Q  349 t---ttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttct 405  Q
    |   ||||||| ||||| |||||| ||||||||||||||   ||||||||| ||||||||    
T  41031629 tttattatgatagtggaaaatgcaccaatacttaacaagtgcacttaaaactatttttct 41031688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 325 - 435
Target Start/End: Original strand, 54782996 - 54783106
Alignment:
Q  325 caattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttatacat 424  Q
    |||||||||||||||||||||||||||||||| | | |||||||| |||||||||| |||   ||||||||| |||||||||| ||   || ||||||||    
T  54782996 caattcaatatatttcactttacatttatgatagcgcataatgcaccaatacttaagaagtgcacttaaaactatttttctctctcattcatttatacat 54783095  T
Q  425 ttttcttaata 435  Q
    |||||||||||    
T  54783096 ttttcttaata 54783106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 300 - 445
Target Start/End: Complemental strand, 11251226 - 11251081
Alignment:
Q  300 taatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaat 399  Q
    |||| ||| ||||||| || | || ||||| |||||| |||| ||| |||||||||| ||||| |||||| |||||||||||||||  ||||||||  ||    
T  11251226 taattaatgttactttcatcactcacaatttaatatagttcaatttgcatttatgatagtggagaatgcaccaatacttaacaagagcacttaaaatcat 11251127  T
Q  400 ttttctctttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    |||| ||| ||   || |||||||||||||||||||||||||||||    
T  11251126 ttttttctctcattcatttatacatttttcttaatatatgtgaaat 11251081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 291 - 447
Target Start/End: Complemental strand, 32023209 - 32023052
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| ||||||||||| || | |||||||||||||||||  ||||| ||||||| || ||||| |||||| ||||||||||||| | ||||    
T  32023209 ttataactctaattaatattactttcatcactctcaattcaatatattcaactttgcatttataatagtggagaatgcaccaatacttaacaaaagtact 32023110  T
Q  391 taaaac-aatttttctctttctcccagttatacatttttcttaatatatgtgaaataa 447  Q
    ||||||  |||||||| | ||   || ||||||||||| |||||||| ||| ||||||    
T  32023109 taaaacttatttttctatctccttcatttatacattttccttaatatgtgtaaaataa 32023052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 305 - 454
Target Start/End: Complemental strand, 36097749 - 36097600
Alignment:
Q  305 aatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttc 404  Q
    ||||||||||| || | ||||||||||||||||| |||||| ||||| | |  ||||| |||||| | ||||||||||||| |||||||||| |||||||    
T  36097749 aatattactttcatcactctcaattcaatatattccactttgcatttctaacagtggagaatgcaccgatacttaacaagagtacttaaaaccatttttc 36097650  T
Q  405 tctttctcccagttatacatttttcttaatatatgtgaaataagcaaatg 454  Q
    ||| ||   || |||||| || |||||||||| | |||||| ||||||||    
T  36097649 tctctccttcatttatacgttcttcttaatatgtatgaaatgagcaaatg 36097600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 324 - 454
Target Start/End: Original strand, 10855026 - 10855156
Alignment:
Q  324 tcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttataca 423  Q
    ||||||||||||||| |||||| |||||||||  |||||||||||| |||||| ||| || || ||||||||| |||||||||| ||   || |||||||    
T  10855026 tcaattcaatatattccactttgcatttatgagagtggataatgcaccaatacataataaaaacacttaaaactatttttctctctccttcatttataca 10855125  T
Q  424 tttttcttaatatatgtgaaataagcaaatg 454  Q
    ||| ||||||||  |||||||| | ||||||    
T  10855126 tttatcttaatacgtgtgaaatgatcaaatg 10855156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 291 - 383
Target Start/End: Original strand, 45392089 - 45392181
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaa 383  Q
    |||||||| |||| ||||||||||| || |||  |||||||||||||||||||||||||||| ||| || ||||||||| ||||| |||||||    
T  45392089 ttataactctaattaatattactttcatcatttccaattcaatatatttcactttacatttacgatagtagataatgcaccaatagttaacaa 45392181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 291 - 453
Target Start/End: Complemental strand, 54845624 - 54845462
Alignment:
Q  291 ttataactttaatcaatattactttaatta-ttctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatac 389  Q
    |||||||| |||| |||| |||||| |||| |||| ||||||||||||| |||||| ||||||||||  | || |||||||| || |||||||| || ||    
T  54845624 ttataactctaattaatactactttcattacttct-aattcaatatattccactttgcatttatgatactagagaatgcatcgatccttaacaaaaacac 54845526  T
Q  390 ttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaat 453  Q
    ||||||| |||||||||| ||   || |||||||| ||||||||||| | | |||| |||||||    
T  54845525 ttaaaactatttttctctctccttcatttatacatatttcttaatatgtataaaatgagcaaat 54845462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 292 - 454
Target Start/End: Complemental strand, 17777101 - 17776939
Alignment:
Q  292 tataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatactt 391  Q
    ||||||| |||| ||||||| ||| || | |||| |||||||||||| |||||| |||||||| | ||||| ||||||  ||||||||| || |  || |    
T  17777101 tataactctaattaatattattttcatcactctcgattcaatatattccactttgcatttatggtagtggagaatgcacaaatacttaaaaaaagcacct 17777002  T
Q  392 aaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaatg 454  Q
    ||||| |||||||||| ||   || |||||||||||| ||||||  |||||||| ||||||||    
T  17777001 aaaaccatttttctctctcattcatttatacattttttttaatacgtgtgaaatgagcaaatg 17776939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 292 - 454
Target Start/End: Complemental strand, 19078402 - 19078240
Alignment:
Q  292 tataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatactt 391  Q
    ||||||| |||| ||||||| ||| || | |||| |||||||||||| |||||| |||||||| | ||||| ||||||  ||||||||| || |  || |    
T  19078402 tataactctaattaatattattttcatcactctcgattcaatatattccactttgcatttatggtagtggagaatgcacaaatacttaaaaaaagcacct 19078303  T
Q  392 aaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaatg 454  Q
    ||||| |||||||||| ||   || |||||||||||| ||||||  |||||||| ||||||||    
T  19078302 aaaaccatttttctctctcattcatttatacattttttttaatacgtgtgaaatgagcaaatg 19078240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 291 - 436
Target Start/End: Original strand, 5245411 - 5245556
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| ||||  ||||| || | ||||||||||||||||| ||||||  |||||||||  |||| ||| || |||||||||||||||  |||    
T  5245411 ttataactctaattaataccactttcatcactctcaattcaatatattccactttgtatttatgatattggagaatacaccaatacttaacaagagcact 5245510  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatat 436  Q
    |||||| |||||||||| ||   ||  ||||||||| |||||||||    
T  5245511 taaaactatttttctctctccttcatgtatacatttgtcttaatat 5245556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 372 - 469
Target Start/End: Original strand, 49408589 - 49408686
Alignment:
Q  372 aatacttaacaagaatacttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaatggttcacttcatccag 469  Q
    ||||||||||||||| ||||||||| |||||||||||||   || ||||| ||| |||||||||| | |||||| ||||||||||||| || ||||||    
T  49408589 aatacttaacaagaacacttaaaactatttttctctttccttcatttataaattattcttaatatgtatgaaatgagcaaatggttcaattaatccag 49408686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 292 - 404
Target Start/End: Original strand, 26832071 - 26832183
Alignment:
Q  292 tataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatactt 391  Q
    ||||||| |||| |||| |||||| || | |  ||||| ||||||||||||||| |||||||| ||||||| ||||||||||||||||| ||||  || |    
T  26832071 tataactctaattaatactactttcatcactaccaatttaatatatttcactttgcatttatggtggtggagaatgcatcaatacttaataagagcacgt 26832170  T
Q  392 aaaacaatttttc 404  Q
    ||||| |||||||    
T  26832171 aaaactatttttc 26832183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 288 - 424
Target Start/End: Original strand, 41287258 - 41287394
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaat 387  Q
    ||||||||||| |||| ||||||| ||| |  | |||||||||||||||||  ||||||||||||||||   | ||||||||||||||||| ||||  ||    
T  41287258 caattataactctaattaatattaatttcacaactctcaattcaatatattctactttacatttatgataaagaataatgcatcaatacttgacaaagat 41287357  T
Q  388 acttaaaacaatttttctctttctcccagttatacat 424  Q
    | | ||||| |||||||||| |||  || ||||||||    
T  41287358 agtcaaaaccatttttctctctctttcacttatacat 41287394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 288 - 448
Target Start/End: Original strand, 52325173 - 52325333
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaat 387  Q
    ||||||||||| |||| |||| ||||||  | ||||||||||||||||||| |||||| |||||||||| | | | |||||| |||||| |||||| ||     
T  52325173 caattataactctaattaatactactttcgtcattctcaattcaatatattccactttgcatttatgatagcgtagaatgcaccaatacataacaataac 52325272  T
Q  388 acttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataag 448  Q
    ||| |||||  ||||||| | ||    | |||||||||||||||||||  ||| |||||||    
T  52325273 actaaaaaccctttttctatctcctttatttatacatttttcttaatacgtgtaaaataag 52325333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 291 - 407
Target Start/End: Original strand, 54493907 - 54494023
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| |||| |||||| || |||  ||||| |||||||||||||||||||||||||| ||||| ||| |  ||||||||||||||   |||    
T  54493907 ttataactctaattaatactactttcatcatttccaatttaatatatttcactttacatttatgatagtggagaatacgccaatacttaacaagtgcact 54494006  T
Q  391 taaaacaatttttctct 407  Q
    |||||| || |||||||    
T  54494007 taaaactatatttctct 54494023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 324 - 454
Target Start/End: Complemental strand, 14756189 - 14756059
Alignment:
Q  324 tcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttataca 423  Q
    |||||| ||||||||  ||||| |||||||||| ||||| |||| | || ||||||||||||  ||||||||  |||||||||| ||    | |||||||    
T  14756189 tcaatttaatatattctactttgcatttatgatagtggagaatgtaccagtacttaacaagagcacttaaaattatttttctctctcctttaattataca 14756090  T
Q  424 tttttcttaatatatgtgaaataagcaaatg 454  Q
    ||||||||||||| ||| |||| ||||||||    
T  14756089 tttttcttaatatgtgtaaaatgagcaaatg 14756059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 291 - 454
Target Start/End: Complemental strand, 46786089 - 46785924
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaat--acttaacaagaata 388  Q
    ||||||||||| | |||| |||||| ||   || ||||||||||||||||||||| |||||||||| ||||| |||  | ||||  |||||||||||  |    
T  46786089 ttataactttagttaatactactttcatcgctcccaattcaatatatttcactttgcatttatgatagtggagaatataccaatacacttaacaagatca 46785990  T
Q  389 cttaaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaatg 454  Q
     ||||||| |||||| ||| ||    | | ||||||||||||||||||||||||||| || |||||    
T  46785989 tttaaaactatttttttctctcctttactaatacatttttcttaatatatgtgaaatgagtaaatg 46785924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 291 - 405
Target Start/End: Complemental strand, 54458417 - 54458303
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    ||||||| ||||| ||||||  |||  | ||||||||||||||||||| |||||||||||||||||  |||| |||||| | ||||||||||| |  |||    
T  54458417 ttataaccttaattaatattgttttcctcattctcaattcaatatattccactttacatttatgataatggagaatgcacccatacttaacaaaatcact 54458318  T
Q  391 taaaacaatttttct 405  Q
    |||||  ||||||||    
T  54458317 taaaatcatttttct 54458303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 386
Target Start/End: Complemental strand, 22202467 - 22202402
Alignment:
Q  321 ttctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaa 386  Q
    ||||||||| ||||||||  ||||| |||||||||| |||||||||||| ||||||||||||||||    
T  22202467 ttctcaatttaatatattcaactttgcatttatgatagtggataatgcaccaatacttaacaagaa 22202402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 288 - 362
Target Start/End: Complemental strand, 37041984 - 37041910
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtgga 362  Q
    ||||||||||| |||| |||| |||||| || |||  |||||||||||||||||||||| ||||||||| |||||    
T  37041984 caattataactctaattaatactactttcatcatttccaattcaatatatttcactttatatttatgatagtgga 37041910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 292 - 385
Target Start/End: Complemental strand, 11529218 - 11529125
Alignment:
Q  292 tataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaaga 385  Q
    ||||||| |||| ||||||||||| || | ||  |||| |||||||| |||||| ||||||||||  |||| |||| |||||||||||||||||    
T  11529218 tataactctaattaatattacttttatcactcataatttaatatattccactttgcatttatgatattggagaatgtatcaatacttaacaaga 11529125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 404
Target Start/End: Complemental strand, 46628024 - 46627920
Alignment:
Q  300 taatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaat 399  Q
    |||| |||| |||||| || |||||| ||||||||||||  ||||| ||||||||||  |||  ||| ||||||||||| ||||||| ||||||||  ||    
T  46628024 taattaatactacttttatcattctctattcaatatattatactttgcatttatgataatggtaaatacatcaatacttgacaagaacacttaaaatcat 46627925  T
Q  400 ttttc 404  Q
    |||||    
T  46627924 ttttc 46627920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 288 - 356
Target Start/End: Complemental strand, 53754175 - 53754107
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    ||||||||||| |||| |||| |||||| | |||||| |||||||||||||  ||||||||||||||||    
T  53754175 caattataactctaattaatactacttttactattcttaattcaatatattctactttacatttatgat 53754107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 325 - 444
Target Start/End: Complemental strand, 21296577 - 21296458
Alignment:
Q  325 caattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttatacat 424  Q
    ||||||||||||||  ||||| |||||||||| ||| | |||||| |||||||||||||||  | ||||||  ||||| |||| ||   || ||||||||    
T  21296577 caattcaatatattctactttgcatttatgatagtgaaaaatgcaccaatacttaacaagagcatttaaaatcattttcctctctccttcatttatacat 21296478  T
Q  425 ttttcttaatatatgtgaaa 444  Q
    || ||||| ||| |||||||    
T  21296477 ttgtcttagtatgtgtgaaa 21296458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 289 - 356
Target Start/End: Complemental strand, 27668437 - 27668370
Alignment:
Q  289 aattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    |||||||||| |||| |||| |||||| || | ||| |||||||||||||||||||| ||||||||||    
T  27668437 aattataactctaattaatactacttttatcactcttaattcaatatatttcactttgcatttatgat 27668370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 288 - 444
Target Start/End: Original strand, 48409580 - 48409738
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaat 387  Q
    ||||||||||| |||| |||| |||||| |  | || |||||||| |||||  ||||||||||||||||   | | ||| || |||||||| ||||  |     
T  48409580 caattataactctaattaatactactttcaccactcccaattcaacatattctactttacatttatgataaagaagaatccaccaatacttgacaaagac 48409679  T
Q  388 acttaaaacaatttttctctttctc--ccagttatacatttttcttaatatatgtgaaa 444  Q
    ||| |||||||| ||||||| ||||   || |||||||||||||||||||| |||||||    
T  48409680 actcaaaacaatctttctctctctctttcatttatacatttttcttaatatgtgtgaaa 48409738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 288 - 354
Target Start/End: Complemental strand, 34081166 - 34081100
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatg 354  Q
    ||||||||| |||||| |||| |||||| || |||||||||| ||||||||  ||||||||||||||    
T  34081166 caattataaatttaattaatactacttttatcattctcaatttaatatattatactttacatttatg 34081100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 300 - 432
Target Start/End: Complemental strand, 1772206 - 1772073
Alignment:
Q  300 taatcaatattactttaattattctcaattcaatatattt-cactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaa 398  Q
    |||| ||||||||||| || | ||  ||||||||||| |  |||||| | |||||||| ||||| |||  | |||||||||||||||| ||||||||| |    
T  1772206 taattaatattactttcatcactcctaattcaatataatcacactttgcttttatgatagtggagaatataccaatacttaacaagaacacttaaaacca 1772107  T
Q  399 tttttctctttctcccagttatacatttttctta 432  Q
    ||||||||| ||    | ||||||||||||||||    
T  1772106 tttttctctctcctttatttatacatttttctta 1772073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 288 - 385
Target Start/End: Complemental strand, 3862283 - 3862186
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaaga 385  Q
    ||||||||||| |||| ||||||||||| || | |||||||||| ||||||| | ||| ||||||||||  ||   ||||||||||| ||| ||||||    
T  3862283 caattataactctaattaatattactttcatcactctcaattcagtatattttaatttgcatttatgataatgtggaatgcatcaatccttgacaaga 3862186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 455
Target Start/End: Complemental strand, 11529076 - 11529020
Alignment:
Q  399 tttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaaatgg 455  Q
    |||||||||||||  || ||||| |||||||||||||| |||||||| |||||||||    
T  11529076 tttttctctttctttcatttatatatttttcttaatatgtgtgaaatgagcaaatgg 11529020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 407
Target Start/End: Complemental strand, 55415515 - 55415431
Alignment:
Q  323 ctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctct 407  Q
    ||||||||||||| | |||||||  ||||||||| ||  | |||||| ||||||||||||| || | ||||||| ||||||||||    
T  55415515 ctcaattcaatatgtgtcactttgtatttatgatagtaaagaatgcaccaatacttaacaaaaacagttaaaaccatttttctct 55415431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 356
Target Start/End: Original strand, 47496166 - 47496233
Alignment:
Q  289 aattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    |||||||||| |||| |||| |||||| || | ||| |||||||||||||  ||||||||||||||||    
T  47496166 aattataactctaattaatactactttcatcactcttaattcaatatattagactttacatttatgat 47496233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 415 - 453
Target Start/End: Complemental strand, 4980769 - 4980731
Alignment:
Q  415 agttatacatttttcttaatatatgtgaaataagcaaat 453  Q
    |||| |||||||||||| |||||||||||||||||||||    
T  4980769 agttttacatttttcttgatatatgtgaaataagcaaat 4980731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 366 - 451
Target Start/End: Complemental strand, 39365071 - 39364985
Alignment:
Q  366 tgcatcaatacttaacaagaatacttaaaacaa-tttttctctttctcccagttatacatttttcttaatatatgtgaaataagcaa 451  Q
    |||| |||||||||||||||  ||||||||| | ||||||||| ||    | |||||||||||||||||||| |||||||| |||||    
T  39365071 tgcaccaatacttaacaagagcacttaaaaccactttttctctctcctttatttatacatttttcttaatatgtgtgaaatgagcaa 39364985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 445
Target Start/End: Complemental strand, 44219144 - 44218988
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaat 387  Q
    ||||||||||| |||| |||| || ||| |||| |  ||||||||||||||  |||||  |||||||||  |||  |||||| ||| |||| ||||| |     
T  44219144 caattataactctaattaatactattttcattacttccaattcaatatattctactttgtatttatgataatggggaatgcaccaacactt-acaag-ac 44219047  T
Q  388 acttaaaacaatttttctctttctcccagttataca-tttttcttaatatatgtgaaat 445  Q
    ||| ||||| ||||||||||||||   | ||||||| ||||||||||||| ||||||||    
T  44219046 actcaaaaccatttttctctttctttgacttatacactttttcttaatatgtgtgaaat 44218988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 385
Target Start/End: Complemental strand, 39329861 - 39329764
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaaga 385  Q
    ||||||||| | |||| |||| |||||| || | |||||||||||||||||  ||||| ||||||||||     | |||||| |||||||||||||||    
T  39329861 caattataattctaattaatactactttcatcactctcaattcaatatattctactttgcatttatgataagaaagaatgcaccaatacttaacaaga 39329764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 383
Target Start/End: Complemental strand, 47165271 - 47165210
Alignment:
Q  322 tctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaa 383  Q
    |||||||||||||  ||||||||||||||||||||  |||  ||||||| ||||||| ||||    
T  47165271 tctcaattcaatagctttcactttacatttatgataatggtaaatgcattaatacttgacaa 47165210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 229 - 277
Target Start/End: Original strand, 8706088 - 8706136
Alignment:
Q  229 tgtcctaaaattacttacatatttcacttttcaatacaatattaattac 277  Q
    ||||||||||  ||| |||| |||||||||||||||||||||| |||||    
T  8706088 tgtcctaaaaaaactgacatgtttcacttttcaatacaatattgattac 8706136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 229 - 277
Target Start/End: Original strand, 9057975 - 9058023
Alignment:
Q  229 tgtcctaaaattacttacatatttcacttttcaatacaatattaattac 277  Q
    ||||||||||  ||| |||| |||||||||||||||||||||| |||||    
T  9057975 tgtcctaaaaaaactgacatgtttcacttttcaatacaatattgattac 9058023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Complemental strand, 21296650 - 21296622
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  21296650 atttcacttttcaatacaatattaattac 21296622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 289 - 356
Target Start/End: Complemental strand, 30261612 - 30261544
Alignment:
Q  289 aattataactttaatcaatattactttaattattctcaa-ttcaatatatttcactttacatttatgat 356  Q
    |||||||||| |||| |||| |||||| || | || ||| ||||||||||| |||||||||||||||||    
T  30261612 aattataactctaattaatactactttcatcactcccaaattcaatatattccactttacatttatgat 30261544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Complemental strand, 36791020 - 36790992
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  36791020 atttcacttttcaatacaatattaattac 36790992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Complemental strand, 43640712 - 43640684
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  43640712 atttcacttttcaatacaatattaattac 43640684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Complemental strand, 46194353 - 46194325
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  46194353 atttcacttttcaatacaatattaattac 46194325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Original strand, 51164912 - 51164940
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  51164912 atttcacttttcaatacaatattaattac 51164940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 356
Target Start/End: Original strand, 53051022 - 53051090
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    ||||||||||| |||| |||| |||||| |  | || ||||||||||||||  ||||||||||||||||    
T  53051022 caattataactctaattaatactactttcacaactcccaattcaatatattatactttacatttatgat 53051090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 291 - 449
Target Start/End: Original strand, 14455 - 14613
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| |||| |||||| || ||| ||||||||||||||| ||||||||||||||||  ||||| |||||||||||||||| ||||   | |    
T  14455 ttataactctaattaatactactttcatcattttcaattcaatatattccactttacatttatgacagtggagaatgcatcaatacttagcaagtgcaat 14554  T
Q  391 taaaacaatttttctctttctcccagttatacatttttcttaatatatgtgaaataagc 449  Q
    |||||| |||||| |||  |   || |||||||||||||||||||  ||||||||||||    
T  14555 taaaactatttttatctccccttcatttatacatttttcttaatacgtgtgaaataagc 14613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 291 - 382
Target Start/End: Original strand, 8886 - 8977
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaaca 382  Q
    |||||||| |||| ||||||||||| || ||||||||||||||||||| |||||| ||||||| || ||||| |||||| |||||| |||||    
T  8886 ttataactctaattaatattactttcatcattctcaattcaatatattccactttgcatttataatagtggagaatgcaccaatacataaca 8977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 291 - 369
Target Start/End: Original strand, 26321 - 26399
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgca 369  Q
    |||||||| |||| ||||||||||| || |||  |||||||||||||| ||||||||||||||||| ||||||||||||    
T  26321 ttataactctaattaatattacttttatcatttccaattcaatatattccactttacatttatgatagtggataatgca 26399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 248 - 356
Target Start/End: Complemental strand, 8102 - 7997
Alignment:
Q  248 tatttcacttttcaatacaatattaattacnnnnnnnnnncaattataactttaatcaatattactttaattattctcaattcaatatatttcactttac 347  Q
    ||||||||||||||||||||||| ||||||          |||||||||||||||| |||| |||||| |  |||||||||||||||||||| |||||||    
T  8102 tatttcacttttcaatacaatatcaattactttttcc---caattataactttaattaatactactttcacaattctcaattcaatatattttactttac 8006  T
Q  348 atttatgat 356  Q
    |||||||||    
T  8005 atttatgat 7997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0685 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0685
Description:

Target: scaffold0685; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 288 - 378
Target Start/End: Complemental strand, 6511 - 6421
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatactt 378  Q
    ||||||||||| |||| ||||||||||| |  | |||||||||||||||||| ||||||||||||||||   | | |||||||||||||||    
T  6511 caattataactctaattaatattactttcaccactctcaattcaatatattttactttacatttatgataaagaagaatgcatcaatactt 6421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 291 - 467
Target Start/End: Complemental strand, 9657 - 9485
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| |||| |||||| || | ||||||||||   |||| |||||| ||||||||||  |||| ||| ||| ||||||||||||||  |||    
T  9657 ttataactctaattaatactactttcatcactctcaattca---tattccactttgcatttatgataatggagaatacattaatacttaacaagagcact 9561  T
Q  391 taaaacaatttttctctttctcccagttatac-atttttcttaatatatgtgaaataagcaaatggttcacttcatcc 467  Q
    |||||| |||||||||| ||   || ||||||  |||||||||  ||||||||||| ||| ||||| |||||| ||||    
T  9560 taaaaccatttttctctctccttcatttatactttttttctta--atatgtgaaatgagcgaatggctcacttaatcc 9485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 277
Target Start/End: Complemental strand, 9696 - 9668
Alignment:
Q  249 atttcacttttcaatacaatattaattac 277  Q
    |||||||||||||||||||||||||||||    
T  9696 atttcacttttcaatacaatattaattac 9668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 325 - 444
Target Start/End: Original strand, 229856 - 229974
Alignment:
Q  325 caattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatacttaaaacaatttttctctttctcccagttatacat 424  Q
    |||||||||||||  |||||| ||||||||||  |||| |||||| |||||||||||||||  ||||||||| |||||||| | ||   || ||||||||    
T  229856 caattcaatatataccactttgcatttatgataatggagaatgcaccaatacttaacaagagcacttaaaac-atttttctatctccttcatttatacat 229954  T
Q  425 ttttcttaatatatgtgaaa 444  Q
    || ||||||||  |||||||    
T  229955 ttgtcttaatacgtgtgaaa 229974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 291 - 445
Target Start/End: Original strand, 230255 - 230408
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaatact 390  Q
    |||||||| |||| ||||||||||| |  | |  |||||||||||||| || ||| ||||||||||    || |||| | | || |||||||||||||||    
T  230255 ttataactctaattaatattactttcacaacttccaattcaatatattccattttgcatttatgataacagagaatgtacccatgcttaacaagaatact 230354  T
Q  391 taaaacaatttttctct-ttctcccagttatacatttttcttaatatatgtgaaat 445  Q
    |||||| |||||||||| ||||  || ||||||| || ||||||||||||||||||    
T  230355 taaaaccatttttctctcttct-tcatttataca-ttgtcttaatatatgtgaaat 230408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 288 - 383
Target Start/End: Complemental strand, 352572 - 352477
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaa 383  Q
    ||||||||||| || | ||||||||||| | || || ||||||||||||||  ||||||||||||||||   | | |||||| |||||||||||||    
T  352572 caattataactctatttaatattactttcactactcccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttaacaa 352477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 356
Target Start/End: Original strand, 5817 - 5882
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgat 356  Q
    ||||||||||||| |||| |||||| |  | |||||||||||||||||  ||||||||||||||||    
T  5817 ttataactttaattaatactactttcaccactctcaattcaatatattctactttacatttatgat 5882  T

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Target: scaffold0020 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 407
Target Start/End: Original strand, 171222 - 171341
Alignment:
Q  288 caattataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaacaagaat 387  Q
    |||||||||||   || ||||||||||| || | ||  |||||||||||||  ||||||||||||||||  |||  || ||| |||||||| |||||||     
T  171222 caattataactcatattaatattactttcatcactcctaattcaatatattctactttacatttatgataatggtaaacgcaccaatacttgacaagaac 171321  T
Q  388 acttaaaacaatttttctct 407  Q
    | |||||||  |||||||||    
T  171322 atttaaaaccttttttctct 171341  T

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Target: scaffold0028 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 291 - 381
Target Start/End: Original strand, 26612 - 26702
Alignment:
Q  291 ttataactttaatcaatattactttaattattctcaattcaatatatttcactttacatttatgatggtggataatgcatcaatacttaac 381  Q
    |||||| | |||| |||| |||||| || | || |||||||||||||| |||||| |||||||||| ||||| |||  | |||||||||||    
T  26612 ttataattctaattaatactactttcatcactcgcaattcaatatattccactttgcatttatgatagtggagaatagaccaatacttaac 26702  T

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