View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5714_low_10 (Length: 239)
Name: NF5714_low_10
Description: NF5714
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5714_low_10 |
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Alignment Details
Target: chr2 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 16 - 213
Target Start/End: Complemental strand, 36604617 - 36604420
Alignment:
| Q |
16 |
cttttcttaatggcagattagtaattcactgttatctttattcatatgtatatgtatgcatatacgtgtaattcctcttaatgctagcttctcgtattca |
115 |
Q |
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| T |
36604617 |
cttttcttaatggcagattggtaattcactgttatctttattcatatgtatatgtatgcatatacgtgtaattcctcttaatgctagcttctcgtattca |
36604518 |
T |
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| Q |
116 |
tgtttatttccaagatgcttcgtggaagctgcttctgcttagtttaaagtataccaccaatttatacgtcagaattcctacctcttcatagttactac |
213 |
Q |
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||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36604517 |
tgtttatttccaagatgcttcgtggaagctgctgctacttagtttaaagtataccaccaatttatacgtcagaattcctacctcttcatagttactac |
36604420 |
T |
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