View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5717_high_12 (Length: 583)

Name: NF5717_high_12
Description: NF5717
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5717_high_12
NF5717_high_12
[»] chr5 (10 HSPs)
chr5 (19-532)||(244418-244932)
chr5 (19-532)||(29949777-29950291)
chr5 (19-532)||(29951415-29951929)
chr5 (351-524)||(4568244-4568417)
chr5 (251-348)||(27401975-27402072)
chr5 (404-531)||(11126394-11126518)
chr5 (531-568)||(4568446-4568483)
chr5 (468-532)||(22821276-22821341)
chr5 (398-443)||(34597760-34597804)
chr5 (538-568)||(244360-244390)
[»] chr4 (27 HSPs)
chr4 (19-532)||(15019260-15019774)
chr4 (19-528)||(15017624-15018134)
chr4 (26-532)||(39488127-39488637)
chr4 (99-532)||(9166926-9167359)
chr4 (19-334)||(13518136-13518454)
chr4 (351-532)||(17266675-17266857)
chr4 (351-532)||(34098713-34098893)
chr4 (19-194)||(9398935-9399113)
chr4 (196-359)||(19457999-19458162)
chr4 (196-359)||(19459700-19459863)
chr4 (149-359)||(19456246-19456453)
chr4 (149-308)||(19460552-19460708)
chr4 (261-361)||(24663564-24663664)
chr4 (346-499)||(17780701-17780859)
chr4 (351-500)||(23090830-23090978)
chr4 (231-361)||(22474101-22474231)
chr4 (265-361)||(21484603-21484699)
chr4 (382-448)||(19460135-19460201)
chr4 (468-532)||(11475673-11475738)
chr4 (531-568)||(15017561-15017598)
chr4 (531-568)||(15019201-15019238)
chr4 (532-568)||(39488068-39488104)
chr4 (398-464)||(19180483-19180550)
chr4 (531-568)||(17266615-17266652)
chr4 (404-464)||(19459912-19459973)
chr4 (531-568)||(34098915-34098952)
chr4 (404-463)||(11099045-11099105)
[»] chr7 (17 HSPs)
chr7 (19-532)||(9595414-9595930)
chr7 (19-532)||(9646377-9646893)
chr7 (19-361)||(7842866-7843211)
chr7 (19-334)||(9647111-9647429)
chr7 (351-532)||(32706332-32706513)
chr7 (27-194)||(41000394-41000564)
chr7 (27-194)||(40998535-40998705)
chr7 (351-464)||(5247437-5247550)
chr7 (266-334)||(9596148-9596216)
chr7 (19-99)||(23446852-23446932)
chr7 (468-532)||(16157057-16157122)
chr7 (468-532)||(21368624-21368689)
chr7 (405-500)||(14575569-14575663)
chr7 (405-500)||(14578845-14578939)
chr7 (531-568)||(9595355-9595392)
chr7 (531-568)||(9646318-9646355)
chr7 (468-513)||(22707688-22707733)
[»] chr1 (15 HSPs)
chr1 (18-532)||(24157034-24157548)
chr1 (19-532)||(20190409-20190924)
chr1 (19-346)||(36233498-36233825)
chr1 (23-265)||(20189042-20189287)
chr1 (345-532)||(22062122-22062309)
chr1 (351-532)||(20127064-20127245)
chr1 (351-532)||(6473767-6473948)
chr1 (19-194)||(20759286-20759464)
chr1 (19-98)||(48462995-48463074)
chr1 (140-194)||(31390245-31390299)
chr1 (468-513)||(37260438-37260483)
chr1 (401-464)||(40554445-40554509)
chr1 (538-568)||(20127273-20127303)
chr1 (406-464)||(48463137-48463195)
chr1 (531-568)||(22062062-22062099)
[»] scaffold0269 (1 HSPs)
scaffold0269 (19-422)||(1490-1897)
[»] chr8 (8 HSPs)
chr8 (19-344)||(8366297-8366625)
chr8 (352-532)||(20730868-20731048)
chr8 (19-194)||(17277991-17278169)
chr8 (469-531)||(18446237-18446299)
chr8 (468-532)||(16417535-16417600)
chr8 (468-532)||(18774284-18774349)
chr8 (404-464)||(23015809-23015870)
chr8 (531-568)||(20731070-20731107)
[»] chr2 (15 HSPs)
chr2 (19-344)||(22300062-22300390)
chr2 (352-532)||(15409793-15409973)
chr2 (351-532)||(6050200-6050381)
chr2 (19-194)||(18535618-18535796)
chr2 (19-194)||(24806599-24806778)
chr2 (19-194)||(24808455-24808634)
chr2 (351-532)||(33809367-33809546)
chr2 (468-532)||(44794775-44794840)
chr2 (401-464)||(44792884-44792948)
chr2 (404-464)||(24808197-24808258)
chr2 (538-570)||(6050140-6050172)
chr2 (531-570)||(15409994-15410033)
chr2 (425-464)||(31939075-31939114)
chr2 (538-568)||(23732365-23732395)
chr2 (488-532)||(23732424-23732468)
[»] chr3 (25 HSPs)
chr3 (19-267)||(25531826-25532077)
chr3 (352-532)||(5553466-5553646)
chr3 (19-194)||(5554107-5554285)
chr3 (19-194)||(23460392-23460570)
chr3 (19-194)||(16346824-16347002)
chr3 (19-194)||(47418292-47418470)
chr3 (351-532)||(17236821-17236996)
chr3 (383-509)||(22271157-22271285)
chr3 (27-190)||(47566673-47566839)
chr3 (235-352)||(2693788-2693908)
chr3 (478-532)||(23433138-23433192)
chr3 (404-531)||(16019432-16019556)
chr3 (468-532)||(13179870-13179935)
chr3 (468-532)||(13184528-13184593)
chr3 (19-98)||(5553388-5553467)
chr3 (471-532)||(33757949-33758011)
chr3 (405-500)||(13956976-13957070)
chr3 (405-500)||(15381933-15382027)
chr3 (405-500)||(15387669-15387763)
chr3 (351-385)||(16345391-16345425)
chr3 (229-288)||(2683933-2683989)
chr3 (404-464)||(16347198-16347259)
chr3 (404-464)||(47418036-47418097)
chr3 (405-500)||(13962709-13962803)
chr3 (531-568)||(5553668-5553705)
[»] chr6 (16 HSPs)
chr6 (345-532)||(20419616-20419803)
chr6 (351-532)||(18781746-18781927)
chr6 (345-532)||(20414883-20415070)
chr6 (352-532)||(30518262-30518442)
chr6 (351-532)||(18553332-18553511)
chr6 (380-532)||(20417530-20417682)
chr6 (351-532)||(6230613-6230794)
chr6 (351-443)||(20417683-20417775)
chr6 (468-532)||(21299377-21299442)
chr6 (531-571)||(20414821-20414861)
chr6 (531-571)||(20419554-20419594)
chr6 (471-529)||(12639527-12639586)
chr6 (404-464)||(2147847-2147908)
chr6 (538-570)||(30518202-30518234)
chr6 (531-568)||(18553534-18553571)
chr6 (531-568)||(20417470-20417507)
[»] scaffold0076 (2 HSPs)
scaffold0076 (345-532)||(54758-54945)
scaffold0076 (531-568)||(54967-55004)
[»] scaffold0075 (1 HSPs)
scaffold0075 (351-532)||(25738-25919)
[»] scaffold0010 (1 HSPs)
scaffold0010 (351-532)||(136750-136931)
[»] scaffold0585 (1 HSPs)
scaffold0585 (355-532)||(850-1027)
[»] scaffold0017 (2 HSPs)
scaffold0017 (351-531)||(4572-4752)
scaffold0017 (531-568)||(4512-4549)
[»] scaffold0083 (1 HSPs)
scaffold0083 (351-532)||(33211-33391)
[»] scaffold0146 (4 HSPs)
scaffold0146 (351-532)||(6609-6789)
scaffold0146 (351-532)||(9504-9684)
scaffold0146 (351-532)||(17171-17351)
scaffold0146 (154-194)||(27480-27520)
[»] scaffold0096 (2 HSPs)
scaffold0096 (394-532)||(22592-22730)
scaffold0096 (531-570)||(22532-22571)
[»] scaffold0026 (1 HSPs)
scaffold0026 (19-188)||(86769-86941)
[»] scaffold0025 (2 HSPs)
scaffold0025 (19-194)||(55047-55225)
scaffold0025 (404-464)||(55425-55486)
[»] scaffold0013 (2 HSPs)
scaffold0013 (19-194)||(241236-241414)
scaffold0013 (404-464)||(241614-241675)
[»] scaffold0018 (2 HSPs)
scaffold0018 (19-194)||(399-578)
scaffold0018 (404-464)||(141-202)
[»] scaffold0359 (1 HSPs)
scaffold0359 (468-532)||(8747-8812)
[»] scaffold0003 (1 HSPs)
scaffold0003 (468-532)||(288993-289058)
[»] scaffold0671 (1 HSPs)
scaffold0671 (468-513)||(2155-2200)
[»] scaffold0065 (1 HSPs)
scaffold0065 (468-513)||(33779-33824)
[»] scaffold0254 (1 HSPs)
scaffold0254 (404-464)||(24311-24372)
[»] scaffold0180 (1 HSPs)
scaffold0180 (404-464)||(10850-10911)
[»] scaffold0139 (1 HSPs)
scaffold0139 (404-464)||(6465-6526)
[»] scaffold0002 (1 HSPs)
scaffold0002 (404-464)||(374790-374851)


Alignment Details
Target: chr5 (Bit Score: 487; Significance: 0; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 487; E-Value: 0
Query Start/End: Original strand, 19 - 532
Target Start/End: Complemental strand, 244932 - 244418
Alignment:
Q  19 aaattcggaatatttaatggtgtaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaaggtgtttgtggaattgtaacgtc 118  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  244932 aaattcgaaatatttaatggtgtaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaaggtgtttgtggaattgtaacgtc 244833  T
Q  119 tagaaataattagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccaacttagagagtcattttgtaacatttta 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  244832 tagaaataattagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccaacttagagagtcattttgtaacatttta 244733  T
Q  219 tttgcattaatcagccaccaaaacattattgtaattagtggttgcatttcctttcattttctaagagttttagagtcaaaatcatcatgtaataagctca 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  244732 tttgcattaatcagccaccaaaacattattgtaattagtggttgcatttcctttcattttctaagagttttagagtcaaaatcatcatgtaataagctca 244633  T
Q  319 tataaatagagcacgaaaatgatatg-aaagggagttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattga 417  Q
    |||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  244632 tataaatagagcacgaaaatgatatgaaaaaggggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattga 244533  T
Q  418 accaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctatcta 517  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  244532 accatccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtcta 244433  T
Q  518 tccattccatttctt 532  Q
    |||||||||||||||    
T  244432 tccattccatttctt 244418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 483; E-Value: 0
Query Start/End: Original strand, 19 - 532
Target Start/End: Original strand, 29949777 - 29950291
Alignment:
Q  19 aaattcggaatatttaatggtgtaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaaggtgtttgtggaattgtaacgtc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29949777 aaattcggaatatttaatggtgtaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaaggtgtttgtggaattgtaacgtc 29949876  T
Q  119 tagaaataattagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccaacttagagagtcattttgtaacatttta 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  29949877 tagaaataattagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccagcttagagagtcattttgtaacatttta 29949976  T
Q  219 tttgcattaatcagccaccaaaacattattgtaattagtggttgcatttcctttcattttctaagagttttagagtcaaaatcatcatgtaataagctca 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29949977 tttgcattaatcagccaccaaaacattattgtaattagtggttgcatttcctttcattttctaagagttttagagtcaaaatcatcatgtaataagctca 29950076  T
Q  319 tataaatagagcacgaaaatgatatg-aaagggagttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattga 417  Q
    |||||||||||||||||||||||||| ||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29950077 tataaatagagcacgaaaatgatatgaaaaagaagttgaatattatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattga 29950176  T
Q  418 accaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctatcta 517  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  29950177 accaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtcta 29950276  T
Q  518 tccattccatttctt 532  Q
    |||||| ||||||||    
T  29950277 tccattacatttctt 29950291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 479; E-Value: 0
Query Start/End: Original strand, 19 - 532
Target Start/End: Original strand, 29951415 - 29951929
Alignment:
Q  19 aaattcggaatatttaatggtgtaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaaggtgtttgtggaattgtaacgtc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29951415 aaattcggaatatttaatggtgtaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaaggtgtttgtggaattgtaacgtc 29951514  T
Q  119 tagaaataattagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccaacttagagagtcattttgtaacatttta 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  29951515 tagaaataattagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccagcttagagagtcattttgtaacatttta 29951614  T
Q  219 tttgcattaatcagccaccaaaacattattgtaattagtggttgcatttcctttcattttctaagagttttagagtcaaaatcatcatgtaataagctca 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29951615 tttgcattaatcagccaccaaaacattattgtaattagtggttgcatttcctttcattttctaagagttttagagtcaaaatcatcatgtaataagctca 29951714  T
Q  319 tataaatagagcacgaaaatgatatg-aaagggagttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattga 417  Q
    |||||||||||||||||||||||||| ||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29951715 tataaatagagcacgaaaatgatatgaaaaagaagttgaatattatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattga 29951814  T
Q  418 accaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctatcta 517  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  29951815 accaaccttgatcttatcaagaaatcatatttcttgtggtgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtcta 29951914  T
Q  518 tccattccatttctt 532  Q
    |||||| ||||||||    
T  29951915 tccattacatttctt 29951929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 351 - 524
Target Start/End: Original strand, 4568244 - 4568417
Alignment:
Q  351 agttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttc 450  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  4568244 agttgaattttatagaattttatacttatgtgtattgagagctttgtctcttgtggttctggattgaaccattcttgatcttatcaaaaaatcatatttc 4568343  T
Q  451 ttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctatctatccattc 524  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  4568344 ttgtggcgatcctcgcatccatagacttatcacttttttggattagaaagtgtggcgtccctgtctatccattc 4568417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 251 - 348
Target Start/End: Original strand, 27401975 - 27402072
Alignment:
Q  251 aattagtggttgcatttcctttcattttctaagagttttagagtcaaaatcatcatgtaataagctcatataaatagagcacgaaaatgatatgaaag 348  Q
    ||||||||| |||||||  ||||||||||| ||||||||||| |||||  |||| |||||| ||| |||||||| ||||||| |||||||||||||||    
T  27401975 aattagtggctgcatttattttcattttctgagagttttagaatcaaagccatcttgtaattagcccatataaaaagagcacaaaaatgatatgaaag 27402072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 404 - 531
Target Start/End: Complemental strand, 11126518 - 11126394
Alignment:
Q  404 tggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgt 503  Q
    ||||||| ||||| |||||  |||||| |||||||||  |   |||||||||| |||||||    ||||||||||| |||||||||||||||||||||||    
T  11126518 tggttcttgattggaccaattttgatcatatcaagaatcc---tttcttgtggtgatcctcaatcccatagacttaccactttcttggattagaaagtgt 11126422  T
Q  504 ggcgtccctatctatccattccatttct 531  Q
    ||| ||||| | | ||||||||||||||    
T  11126421 ggcatccctgtatttccattccatttct 11126394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 531 - 568
Target Start/End: Original strand, 4568446 - 4568483
Alignment:
Q  531 tttccatcaacaatattcataatttgcttccgacggct 568  Q
    |||||| |||||||||||||||||||||||||||||||    
T  4568446 tttccaccaacaatattcataatttgcttccgacggct 4568483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 468 - 532
Target Start/End: Complemental strand, 22821341 - 22821276
Alignment:
Q  468 tccatagacttatcactttcttggattagaaagtgtggcgtccct-atctatccattccatttctt 532  Q
    ||||||||||||||| |||||  |||||||||||||||||| ||| | || |||||||||||||||    
T  22821341 tccatagacttatcattttctaagattagaaagtgtggcgttcctaaactctccattccatttctt 22821276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 398 - 443
Target Start/End: Original strand, 34597760 - 34597804
Alignment:
Q  398 ctcttgtggttctggattgaaccaaccttgatcttatcaagaaatc 443  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||    
T  34597760 ctcttgtggttctggattgaaccatcctt-atcttatcaagaaatc 34597804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 538 - 568
Target Start/End: Complemental strand, 244390 - 244360
Alignment:
Q  538 caacaatattcataatttgcttccgacggct 568  Q
    |||||||||||||||||||||||||||||||    
T  244390 caacaatattcataatttgcttccgacggct 244360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 479; Significance: 0; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 479; E-Value: 0
Query Start/End: Original strand, 19 - 532
Target Start/End: Complemental strand, 15019774 - 15019260
Alignment:
Q  19 aaattcggaatatttaatggtgtaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaaggtgtttgtggaattgtaacgtc 118  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15019774 aaattcgaaatatttaatggtgtaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaaggtgtttgtggaattgtaacgtc 15019675  T
Q  119 tagaaataattagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccaacttagagagtcattttgtaacatttta 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  15019674 tagaaataattagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccaacttagagagtcattttgtaacatttca 15019575  T
Q  219 tttgcattaatcagccaccaaaacattattgtaattagtggttgcatttcctttcattttctaagagttttagagtcaaaatcatcatgtaataagctca 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15019574 tttgcattaatcagccaccaaaacattattgtaattagtggttgcatttcctttcattttctaagagttttagagtcaaaatcatcatgtaataagctca 15019475  T
Q  319 tataaatagagcacgaaaatgatatgaaaggga-gttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattga 417  Q
    |||||||||||||||||||||||||||||  || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15019474 tataaatagagcacgaaaatgatatgaaaaagaggttgaatattatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattga 15019375  T
Q  418 accaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctatcta 517  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15019374 accatccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtcta 15019275  T
Q  518 tccattccatttctt 532  Q
    |||||||||||||||    
T  15019274 tccattccatttctt 15019260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 471; E-Value: 0
Query Start/End: Original strand, 19 - 528
Target Start/End: Complemental strand, 15018134 - 15017624
Alignment:
Q  19 aaattcggaatatttaatggtgtaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaaggtgtttgtggaattgtaacgtc 118  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15018134 aaattcgaaatatttaatggtgtaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaaggtgtttgtggaattgtaacgtc 15018035  T
Q  119 tagaaataattagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccaacttagagagtcattttgtaacatttta 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15018034 tagaaataattagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccaacttagagagtcattttgtaacatttta 15017935  T
Q  219 tttgcattaatcagccaccaaaacattattgtaattagtggttgcatttcctttcattttctaagagttttagagtcaaaatcatcatgtaataagctca 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15017934 tttgcattaatcagccaccaaaacattattgtaattagtggttgcattttctttcattttctaagagttttagagtcaaaatcatcatgtaataagctca 15017835  T
Q  319 tataaatagagcacgaaaatgatatgaaaggga-gttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattga 417  Q
    |||||||||||||||||||||||||||||  || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15017834 tataaatagagcacgaaaatgatatgaaaaagaggttgaatattatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattga 15017735  T
Q  418 accaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctatcta 517  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15017734 accatccttgatcttatcaagaaatcatatttcttatggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtcta 15017635  T
Q  518 tccattccatt 528  Q
    |||||||||||    
T  15017634 tccattccatt 15017624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 417; E-Value: 0
Query Start/End: Original strand, 26 - 532
Target Start/End: Complemental strand, 39488637 - 39488127
Alignment:
Q  26 gaatatttaatggtgtaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaaggtg---tttgtggaattgtaacgtctaga 122  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||| ||||||||||||||||    
T  39488637 gaatatttaatggtttaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaaggtggtgtttgtgaaattgtaacgtctaga 39488538  T
Q  123 aataattagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccaacttagagagtcattttgtaacattttatttg 222  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  39488537 aataataagtcttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccaacttagagagtcattttgtaacctcttatttg 39488438  T
Q  223 cattaatcagccaccaaaacattattgtaattagtggttgcatttcctttcattttctaagagttttagagtcaaaatcatcatgtaataagctcatata 322  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  39488437 cattaatcagccaccaaaacattattgtaattagtggctgcatttcctttcattttctaagagttttagagtcaaaatcaacatgtaatatgctcatata 39488338  T
Q  323 aatagagcacgaaaatgatatgaaaggga-gttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaacca 421  Q
     |||||||||||||||| |||||||   | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  39488337 gatagagcacgaaaatgttatgaaaaaaaagtggaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaatca 39488238  T
Q  422 accttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctatctatcca 521  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  39488237 tccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatcca 39488138  T
Q  522 ttccatttctt 532  Q
    |||||||||||    
T  39488137 ttccatttctt 39488127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 410; E-Value: 0
Query Start/End: Original strand, 99 - 532
Target Start/End: Original strand, 9166926 - 9167359
Alignment:
Q  99 gtttgtggaattgtaacgtctagaaataattagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccaacttagag 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9166926 gtttgtggaattgtaacgtctagaaataattagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccaacttagag 9167025  T
Q  199 agtcattttgtaacattttatttgcattaatcagccaccaaaacattattgtaattagtggttgcatttcctttcattttctaagagttttagagtcaaa 298  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9167026 agtcattttgtaacattttatttgcattaatcagccaccaaaacattattgtaattagtggttggatttcctttcattttctaagagttttagagtcaaa 9167125  T
Q  299 atcatcatgtaataagctcatataaatagagcacgaaaatgatatgaaagggagttgaattttatagaattttacacatatgtgtattgagagctttgtc 398  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9167126 atcatcatgtaataagctcatataaatagagcacgaaaatgatatgaaaagaagttgaattttatagaattttacacatatgtgtattgagagctttgtc 9167225  T
Q  399 tcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaa 498  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9167226 tcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaa 9167325  T
Q  499 agtgtggcgtccctatctatccattccatttctt 532  Q
    |||||||||||||| |||||| ||| ||||||||    
T  9167326 agtgtggcgtccctgtctatcaatttcatttctt 9167359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 19 - 334
Target Start/End: Complemental strand, 13518454 - 13518136
Alignment:
Q  19 aaattcggaatatttaatggtgtaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaaggtg---tttgtggaattgtaac 115  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||   ||||||||||||||||    
T  13518454 aaattcggaatatttaatggtttaaaatgagttgtaagttgaaaacgtggttaaattgtgtaatctgaagaattaaaggtggtgtttgtggaattgtaac 13518355  T
Q  116 gtctagaaataattagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccaacttagagagtcattttgtaacatt 215  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  13518354 gtctagaaataattagcctttacaaatcaatgtgcaaatgaatatgtaacctcctcatgcatttattagccaccaacttagagagtcattttgtaacctt 13518255  T
Q  216 ttatttgcattaatcagccaccaaaacattattgtaattagtggttgcatttcctttcattttctaagagttttagagtcaaaatcatcatgtaataagc 315  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13518254 ttatttgcattaatcagccaccaaaaaattattgtaattagtggctgcatttcctttcattttctaagagttttagagtcaaaatcatcatgtaataagc 13518155  T
Q  316 tcatataaatagagcacga 334  Q
    |||||||||||||||||||    
T  13518154 tcatataaatagagcacga 13518136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 351 - 532
Target Start/End: Complemental strand, 17266857 - 17266675
Alignment:
Q  351 agttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcata-ttt 449  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||    
T  17266857 agttgaattttgtagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccatccttgatcttatcaagaaatcagatttt 17266758  T
Q  450 cttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctatctatccattccatttctt 532  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  17266757 cttgtggtgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccatttctt 17266675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 351 - 532
Target Start/End: Original strand, 34098713 - 34098893
Alignment:
Q  351 agttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttc 450  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||    
T  34098713 agttgaattttatagaattttacacttatgtgtattgagaactttgtctcttgtggttctggattgaaccatccttgatcttatcaagaaattat-tttc 34098811  T
Q  451 ttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctatctatccattccatttctt 532  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||    
T  34098812 ttgtggcgatcctcgcatctatagacttatcactttattggattagaaagtgtggcgtccctgtctatccatttcatttctt 34098893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 19 - 194
Target Start/End: Complemental strand, 9399113 - 9398935
Alignment:
Q  19 aaattcggaatatttaatggtgtaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaagg---tgtttgtggaattgtaac 115  Q
    |||||||||||||||||||||||| |||||  | ||||  ||| ||||||||||||||||| |||||||||||||||||   ||||||||||||||||||    
T  9399113 aaattcggaatatttaatggtgtagaatgatatataagcagaagacgtggttaaagtgtgttagctgaagaattaaaggcggtgtttgtggaattgtaac 9399014  T
Q  116 gtctagaaataattagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccaactt 194  Q
    ||||||| ||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||| |||||    
T  9399013 gtctagacataataagccttcacaaataaatgtgcaaatgaatatgtaaccttctcatgcattgatcagccactaactt 9398935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 196 - 359
Target Start/End: Original strand, 19457999 - 19458162
Alignment:
Q  196 gagagtcattttgtaacattttatttgcattaatcagccaccaaaacattattgtaattagtggttgcatttcctttcattttctaagagttttagagtc 295  Q
    |||| |||||||||||| |||| |||||| ||||||||||| |||||||||||| ||||||||| | || ||||||||||||||||||||| ||||| ||    
T  19457999 gagattcattttgtaaccttttctttgcactaatcagccactaaaacattattggaattagtggctacacttcctttcattttctaagagtgttagaatc 19458098  T
Q  296 aaaatcatcatgtaataagctcatataaatagagcacgaaaatgatatgaaagggagttgaatt 359  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||  ||||||| ||||||    
T  19458099 aaaatcatcatgtaataggctcatataaatagagcatgaaaatgatatataagggagatgaatt 19458162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 196 - 359
Target Start/End: Original strand, 19459700 - 19459863
Alignment:
Q  196 gagagtcattttgtaacattttatttgcattaatcagccaccaaaacattattgtaattagtggttgcatttcctttcattttctaagagttttagagtc 295  Q
    ||||||| |||| |||| |||| |||||| |||| | ||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||| ||    
T  19459700 gagagtcgttttataaccttttctttgcactaattaaccaccaaaacattattgcaattaatggatgcatttcctttcattttctaagagttttagaatc 19459799  T
Q  296 aaaatcatcatgtaataagctcatataaatagagcacgaaaatgatatgaaagggagttgaatt 359  Q
    ||||| ||||||||||| | |||||||||||| |||||||||||||||| ||||||| ||||||    
T  19459800 aaaataatcatgtaatatgttcatataaatagtgcacgaaaatgatatgcaagggagatgaatt 19459863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 149 - 359
Target Start/End: Original strand, 19456246 - 19456453
Alignment:
Q  149 gcaaatgaatatgtaacctcctcatgcattgatta-gccaccaac-ttagagagtcattttgtaacattttatttgcattaatcagccaccaaaacatta 246  Q
    |||||||||| |||||||||  ||||||||||| | |||||| || || |||||||||| ||||||||||| |||||| ||||||| | |||||||||||    
T  19456246 gcaaatgaatgtgtaacctctccatgcattgatgaagccacccaccttggagagtcattatgtaacattttctttgcactaatcagtc-ccaaaacatta 19456344  T
Q  247 ttgtaattagtggttgcatttcctttcattttctaagagttttagagtcaaaatcatcatgtaataagctcatataaatagagcacgaaaatgatatgaa 346  Q
    ||| ||||||| | ||||||||||||||||| ||||||||||||||  |||||| ||    ||||||||||||||||||||||||||| ||||||||| |    
T  19456345 ttgcaattagtagatgcatttcctttcattt-ctaagagttttagaaccaaaattata---taataagctcatataaatagagcacgacaatgatatgta 19456440  T
Q  347 agggagttgaatt 359  Q
    |||||| ||||||    
T  19456441 agggagatgaatt 19456453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 149 - 308
Target Start/End: Complemental strand, 19460708 - 19460552
Alignment:
Q  149 gcaaatgaatatgtaacctcctcatgcattgattagccaccaacttagagagtcattttgtaacattttatttgcattaatcagccaccaaaacattatt 248  Q
    |||||||||| ||||||||| |||||||||||| |  | | | ||| ||||||||||||||||  |||| ||||||||||||| ||||||||||||||||    
T  19460708 gcaaatgaatgtgtaacctcttcatgcattgatgaagc-ctaccttggagagtcattttgtaa--ttttttttgcattaatcaaccaccaaaacattatt 19460612  T
Q  249 gtaattagtggttgcatttcctttcattttctaagagttttagagtcaaaatcatcatgt 308  Q
    ||||||||||| |||||||| |||||||||| |||||||||||| |||||||||||||||    
T  19460611 gtaattagtggctgcatttcatttcattttcaaagagttttagaatcaaaatcatcatgt 19460552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 261 - 361
Target Start/End: Complemental strand, 24663664 - 24663564
Alignment:
Q  261 tgcatttcctttcattttctaagagttttagagtcaaaatcatcatgtaataagctcatataaatagagcacgaaaatgatatgaaagggagttgaattt 360  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||| | |||| || |||||||    
T  24663664 tgcatttccttttattttctaagagttttagaatcaaaatcatcatgtaataaaatcatataaatagagcacgaaaatgatacgtaaggcagatgaattt 24663565  T
Q  361 t 361  Q
    |    
T  24663564 t 24663564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 346 - 499
Target Start/End: Original strand, 17780701 - 17780859
Alignment:
Q  346 aagggagttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggatt----gaaccaaccttgatcttatcaagaaa 441  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||| | |||||||||||| ||||||    |||| | | ||||| |||||||||||    
T  17780701 aaggaagttgaattttatacaattttacacatatgtgtattgagagctct-tctcttgtggttatggattgatcgaactatctttgattttatcaagaaa 17780799  T
Q  442 tcatatttcttgtggcgatcctcgcatccatagacttatca--ctttcttggattagaaa 499  Q
    ||| |||||||||||||||||| ||||  |  | |||||||  |||||||||||||||||    
T  17780800 tcacatttcttgtggcgatccttgcatgtaccggcttatcaatctttcttggattagaaa 17780859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 351 - 500
Target Start/End: Complemental strand, 23090978 - 23090830
Alignment:
Q  351 agttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttc 450  Q
    |||| ||||||||||||||||| ||||||||||||||| |||||||||||||| |||| | ||||||| || ||||||||||||||| ||||  | ||||    
T  23090978 agttaaattttatagaattttatacatatgtgtattgatagctttgtctcttgcggttttagattgaatcatccttgatcttatcaataaattct-tttc 23090880  T
Q  451 ttgtggcgatcctcgcatccatagacttatca--ctttcttggattagaaag 500  Q
    ||||||||||| |   |||||| | |||||||  ||||||||||||||||||    
T  23090879 ttgtggcgatctt--tatccatcggcttatcattctttcttggattagaaag 23090830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 231 - 361
Target Start/End: Original strand, 22474101 - 22474231
Alignment:
Q  231 agccaccaaaacattattgtaattagtggttgcatttcctttcattttctaagagttttagagtcaaaatcatcatgtaataagctcatataaatagagc 330  Q
    ||||||||||||||| |  |||||| |||||||||||||||| ||||||| ||||||| ||| | | ||  ||| |||||| || |||||||||||||||    
T  22474101 agccaccaaaacattgtgataattaatggttgcatttccttttattttcttagagtttcagaattagaactatcttgtaatgagttcatataaatagagc 22474200  T
Q  331 acgaaaatgatatgaaagggagttgaatttt 361  Q
    |||||||||||||| | | ||| ||||||||    
T  22474201 acgaaaatgatatgtatgagagatgaatttt 22474231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 265 - 361
Target Start/End: Complemental strand, 21484699 - 21484603
Alignment:
Q  265 tttcctttcattttctaagagttttagagtcaaaatcatcatgtaataagctcatataaatagagcacgaaaatgatatgaaagggagttgaatttt 361  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||| | |||||||||| |  || ||||||||||| |||| || ||||||||    
T  21484699 tttcctttcattttgtaagagttttagaatcaaaatcatcatgtaataaacgcatataaatacaatacaaaaatgatatgtaaggcagatgaatttt 21484603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 448
Target Start/End: Original strand, 19460135 - 19460201
Alignment:
Q  382 gtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatt 448  Q
    ||||| |||| |||||| ||||||||| || ||||||| |  |||||||||||||||||||||||||    
T  19460135 gtattaagagttttgtcccttgtggttatgaattgaactattcttgatcttatcaagaaatcatatt 19460201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 468 - 532
Target Start/End: Original strand, 11475673 - 11475738
Alignment:
Q  468 tccatagacttatcactttcttggattagaaagtgtggcgtccct-atctatccattccatttctt 532  Q
    ||||| ||||||||| ||||| |||||||||||||||||||| || | || |||||||||||||||    
T  11475673 tccatggacttatcattttctaggattagaaagtgtggcgtctctaaactctccattccatttctt 11475738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 531 - 568
Target Start/End: Complemental strand, 15017598 - 15017561
Alignment:
Q  531 tttccatcaacaatattcataatttgcttccgacggct 568  Q
    |||||| |||||||||||||||||||||||||||||||    
T  15017598 tttccaccaacaatattcataatttgcttccgacggct 15017561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 531 - 568
Target Start/End: Complemental strand, 15019238 - 15019201
Alignment:
Q  531 tttccatcaacaatattcataatttgcttccgacggct 568  Q
    |||||| |||||||||||||||||||||||||||||||    
T  15019238 tttccaccaacaatattcataatttgcttccgacggct 15019201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 532 - 568
Target Start/End: Complemental strand, 39488104 - 39488068
Alignment:
Q  532 ttccatcaacaatattcataatttgcttccgacggct 568  Q
    ||||| |||||||||||||||||||||||||||||||    
T  39488104 ttccaccaacaatattcataatttgcttccgacggct 39488068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 464
Target Start/End: Complemental strand, 19180550 - 19180483
Alignment:
Q  398 ctcttgtggttctggattgaaccaacctt-gatcttatcaagaaatcatatttcttgtggcgatcctc 464  Q
    ||||| ||||||||||||| |||||  || ||||||||||||||| ||  ||||||||||||||||||    
T  19180550 ctcttttggttctggattggaccaaattttgatcttatcaagaaaccacgtttcttgtggcgatcctc 19180483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 568
Target Start/End: Complemental strand, 17266652 - 17266615
Alignment:
Q  531 tttccatcaacaatattcataatttgcttccgacggct 568  Q
    |||||| ||||| |||||||||||||||||||||||||    
T  17266652 tttccaccaacattattcataatttgcttccgacggct 17266615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 464
Target Start/End: Original strand, 19459912 - 19459973
Alignment:
Q  404 tggttctggattgaaccaacctt-gatcttatcaagaaatcatatttcttgtggcgatcctc 464  Q
    |||||||  |||||||||| ||| |||||||| |||||| ||| ||||||||||||||||||    
T  19459912 tggttctaaattgaaccaaactttgatcttataaagaaagcatgtttcttgtggcgatcctc 19459973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 568
Target Start/End: Original strand, 34098915 - 34098952
Alignment:
Q  531 tttccatcaacaatattcataatttgcttccgacggct 568  Q
    |||||| ||||| |||||||||||||||||||||||||    
T  34098915 tttccaccaacattattcataatttgcttccgacggct 34098952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 463
Target Start/End: Original strand, 11099045 - 11099105
Alignment:
Q  404 tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcct 463  Q
    ||||||||||||||||||  | ||||||||||||||||| ||  ||||||||||| |||||    
T  11099045 tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcaatcct 11099105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 439; Significance: 0; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 439; E-Value: 0
Query Start/End: Original strand, 19 - 532
Target Start/End: Complemental strand, 9595930 - 9595414
Alignment:
Q  19 aaattcggaatatttaatggtgtaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaagg---tgtttgtggaattgtaac 115  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||   ||||||||||||||||||    
T  9595930 aaattcggaatatttaatggcttaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctggagaattaaaggaggtgtttgtggaattgtaac 9595831  T
Q  116 gtctagaaataattagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccaacttagagagtcattttgtaacatt 215  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||    
T  9595830 gtctagaaataataagccttcacaaatcaatgtgcaaatgaatatgtaaccacctcatgcattgattagccaccaacttagagagtcattttgtaaactt 9595731  T
Q  216 ttatttgcattaatcagccaccaaaacattattgtaattagtggttgcatttcctttcattttctaagagttttagagtcaaaatcatcatgtaataagc 315  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  9595730 ttatttgaattaatcagccaccaaaacattattgtaattagtggctgcatttcctttcattttctaagagttttagagtcaaaatcatcatgtaataaac 9595631  T
Q  316 tcatataaatagagcacgaaaatgatatgaaagggagttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggatt 415  Q
    ||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9595630 tcatataaatagagcacgaaaatgatatgtaaagaagttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggatt 9595531  T
Q  416 gaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctatc 515  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  9595530 gaaccatccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtc 9595431  T
Q  516 tatccattccatttctt 532  Q
    |||||||| ||||||||    
T  9595430 tatccatttcatttctt 9595414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 439; E-Value: 0
Query Start/End: Original strand, 19 - 532
Target Start/End: Complemental strand, 9646893 - 9646377
Alignment:
Q  19 aaattcggaatatttaatggtgtaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaagg---tgtttgtggaattgtaac 115  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||    
T  9646893 aaattcggaatatttaatggcttaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaaggaggtgtttgtggaattgtaac 9646794  T
Q  116 gtctagaaataattagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccaacttagagagtcattttgtaacatt 215  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||    
T  9646793 gtctagaaataataagccttcacaaatcaatgtccaaatgaatatgtaaccacctcatgcattgattagccaccaacttagagagtcattttgtaaactt 9646694  T
Q  216 ttatttgcattaatcagccaccaaaacattattgtaattagtggttgcatttcctttcattttctaagagttttagagtcaaaatcatcatgtaataagc 315  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  9646693 ttatttgaattaatcagccaccaaaacattattgtaattagtggctgcatttcctttcattttctaagagttttagagtcaaaatcatcatgtaataaac 9646594  T
Q  316 tcatataaatagagcacgaaaatgatatgaaagggagttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggatt 415  Q
    ||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9646593 tcatataaatagagcacgaaaatgatatgtaaagaagttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggatt 9646494  T
Q  416 gaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctatc 515  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  9646493 gaaccatccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtc 9646394  T
Q  516 tatccattccatttctt 532  Q
    |||||||| ||||||||    
T  9646393 tatccatttcatttctt 9646377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 280; E-Value: 1e-156
Query Start/End: Original strand, 19 - 361
Target Start/End: Original strand, 7842866 - 7843211
Alignment:
Q  19 aaattcggaatatttaatggtgtaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaagg---tgtttgtggaattgtaac 115  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||   ||||||||||||||||||    
T  7842866 aaattcggaatatttaatggtttaaaatgagttgtaagtagaaaacgtggttaaagtgtgtaagctggagaattaaaggaggtgtttgtggaattgtaac 7842965  T
Q  116 gtctagaaataattagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccaacttagagagtcattttgtaacatt 215  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||    
T  7842966 gtctagaaataataagccttcacaaatcaatgtgcaaatgaatatgtaacctcttcatgcattgattagccaccaacttagagagtcattttgtaacctt 7843065  T
Q  216 ttatttgcattaatcagccaccaaaacattattgtaattagtggttgcatttcctttcattttctaagagttttagagtcaaaatcatcatgtaataagc 315  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  7843066 ttatttgcattaatcagccaccaaaacattattgtaattagtggctgcatttcctttcattttctaagagtttttgagtcaaaatcatcatgtaataagc 7843165  T
Q  316 tcatataaatagagcacgaaaatgatatgaaagggagttgaatttt 361  Q
    |||||||||||||||||||||||| |||| || | ||| |||||||    
T  7843166 tcatataaatagagcacgaaaatggtatgtaaagaagtagaatttt 7843211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 19 - 334
Target Start/End: Complemental strand, 9647429 - 9647111
Alignment:
Q  19 aaattcggaatatttaatggtgtaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaagg---tgtttgtggaattgtaac 115  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||   ||||||||||||||||||    
T  9647429 aaattcggaatatttaatggtttaaaatgagttgtaagttgaaaacgtggttaaattgtgtaacctgaagaattaaaggaggtgtttgtggaattgtaac 9647330  T
Q  116 gtctagaaataattagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccaacttagagagtcattttgtaacatt 215  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  9647329 gtctagaaataatcagcctttacaaatcaatgtgcaaatgaatatgtaacctcctcatgcatttattagccaccaacttagagagtcattttgtaacctt 9647230  T
Q  216 ttatttgcattaatcagccaccaaaacattattgtaattagtggttgcatttcctttcattttctaagagttttagagtcaaaatcatcatgtaataagc 315  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9647229 ttatttgcattaatcagccaccaaaaaattattgtaattagtggctgcatttcctttcattttctaagagttttagagtcaaaatcatcatgtaataagc 9647130  T
Q  316 tcatataaatagagcacga 334  Q
    |||||||||||||||||||    
T  9647129 tcatataaatagagcacga 9647111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 351 - 532
Target Start/End: Original strand, 32706332 - 32706513
Alignment:
Q  351 agttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttc 450  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  32706332 agttgaattttatagaattttacacatatgtgtattaagagctttgtctcttgtggttctggattgaaccatccttgatcttatcaagaaatcacatttc 32706431  T
Q  451 ttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctatctatccattccatttctt 532  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||| ||| ||||||||    
T  32706432 ttgtggcaatcctcgcatctatagacttatcactttcttggattagaaagtgtggtgtccctctctatctatttcatttctt 32706513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 27 - 194
Target Start/End: Complemental strand, 41000564 - 41000394
Alignment:
Q  27 aatatttaatggtgtaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaaggtg---tttgtggaattgtaacgtctagaa 123  Q
    |||||||||||||| |||||||||||||||| ||| ||||||||||||| ||| |||||||||||||||||||   ||| ||||||||||||||||||      
T  41000564 aatatttaatggtgcaaaatgagttgtaagtagaagacgtggttaaagtatgttagctgaagaattaaaggtggtgtttatggaattgtaacgtctagcc 41000465  T
Q  124 ataattagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccaactt 194  Q
    ||||| | ||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||    
T  41000464 ataataatccttcacaaatcaatgtgcaaatgaatatgtaaccttttcatgcattgatcagccaccaactt 41000394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 27 - 194
Target Start/End: Complemental strand, 40998705 - 40998535
Alignment:
Q  27 aatatttaatggtgtaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaaggtg---tttgtggaattgtaacgtctagaa 123  Q
    |||||||||||||| |||||||| ||||||| ||| ||||||||||||| ||| |||||||||||||||||||   ||| ||||||||||||||||||      
T  40998705 aatatttaatggtgcaaaatgagctgtaagtagaagacgtggttaaagtatgttagctgaagaattaaaggtggtgtttatggaattgtaacgtctagcc 40998606  T
Q  124 ataattagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccaactt 194  Q
    ||||| | ||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||    
T  40998605 ataataatccttcacaaatcaatgtgcaaatgaatatgtaaccttttcatgcattgatcagccaccaactt 40998535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 351 - 464
Target Start/End: Complemental strand, 5247550 - 5247437
Alignment:
Q  351 agttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttc 450  Q
    ||||||||| | ||||||||||||| |||| || |||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||     
T  5247550 agttgaattgtgtagaattttacacgtatgagtgttgagagctttgtctcttatggttctggattgaatcatccttgatcttatcaagaaatcatatttt 5247451  T
Q  451 ttgtggcgatcctc 464  Q
    |||||| |||||||    
T  5247450 ttgtggagatcctc 5247437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 266 - 334
Target Start/End: Complemental strand, 9596216 - 9596148
Alignment:
Q  266 ttcctttcattttctaagagttttagagtcaaaatcatcatgtaataagctcatataaatagagcacga 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9596216 ttcctttcattttctaagagttttagagtcaaaatcatcatgtaataagctcatataaatagagcacga 9596148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 23446852 - 23446932
Alignment:
Q  19 aaattcggaatatttaatggtgtaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaaggtg 99  Q
    |||||||||||||||||||||| | |||||| ||||||| ||| ||||||||||||| ||| |||||||||||||||||||    
T  23446852 aaattcggaatatttaatggtgcagaatgagctgtaagtagaagacgtggttaaagtatgttagctgaagaattaaaggtg 23446932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 468 - 532
Target Start/End: Original strand, 16157057 - 16157122
Alignment:
Q  468 tccatagacttatcactttcttggattagaaagtgtggcgtccct-atctatccattccatttctt 532  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||| | || |||||||||||||||    
T  16157057 tccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttctt 16157122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 468 - 532
Target Start/End: Complemental strand, 21368689 - 21368624
Alignment:
Q  468 tccatagacttatcactttcttggattagaaagtgtggcgtccct-atctatccattccatttctt 532  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||| | || |||||||||||||||    
T  21368689 tccatagacttatcattttctaggattagaaagtgtggcatccctaaactctccattccatttctt 21368624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 405 - 500
Target Start/End: Complemental strand, 14575663 - 14575569
Alignment:
Q  405 ggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatca--ctttcttggattagaaag 500  Q
    |||||||||||| |||||   |||||||||||||||||| | |||||||||| ||||||  ||||||||| |||||||  || |||||||||||||||    
T  14575663 ggttctggattggaccaaaactgatcttatcaagaaatcct-tttcttgtggtgatcct--catccataggcttatcattctctcttggattagaaag 14575569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 405 - 500
Target Start/End: Complemental strand, 14578939 - 14578845
Alignment:
Q  405 ggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatca--ctttcttggattagaaag 500  Q
    |||||||||||| |||||   |||||||||||||||||| | |||||||||| ||||||  ||||||||| |||||||  || |||||||||||||||    
T  14578939 ggttctggattggaccaaaactgatcttatcaagaaatcct-tttcttgtggtgatcct--catccataggcttatcattctctcttggattagaaag 14578845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 531 - 568
Target Start/End: Complemental strand, 9595392 - 9595355
Alignment:
Q  531 tttccatcaacaatattcataatttgcttccgacggct 568  Q
    |||||| |||||||||||||||||||||||||||||||    
T  9595392 tttccaccaacaatattcataatttgcttccgacggct 9595355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 531 - 568
Target Start/End: Complemental strand, 9646355 - 9646318
Alignment:
Q  531 tttccatcaacaatattcataatttgcttccgacggct 568  Q
    |||||| |||||||||||||||||||||||||||||||    
T  9646355 tttccaccaacaatattcataatttgcttccgacggct 9646318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 513
Target Start/End: Complemental strand, 22707733 - 22707688
Alignment:
Q  468 tccatagacttatcactttcttggattagaaagtgtggcgtcccta 513  Q
    ||||||| ||||||| ||||| ||||||||||||| ||||||||||    
T  22707733 tccataggcttatcagtttctaggattagaaagtgaggcgtcccta 22707688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 408; Significance: 0; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 408; E-Value: 0
Query Start/End: Original strand, 18 - 532
Target Start/End: Complemental strand, 24157548 - 24157034
Alignment:
Q  18 aaaattcggaatatttaatggtgtaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaaggtg---tttgtggaattgtaa 114  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||   |||||||||||||||    
T  24157548 aaaattcggaatatttaatggtttaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagcggaagaattaaaggtggtgtttgtggaattgtaa 24157449  T
Q  115 cgtctagaaataattagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccaacttagagagtcattttgtaacat 214  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  24157448 cgtctagaaataataagccttcacaaatcaat-tgcaaatgaatatgtaacctcctcatgcattgattagccaccaacttagagagtcattttgtaacct 24157350  T
Q  215 tttatttgcattaatcagccaccaaaacattattgtaattagtggttgcatttcctttcattttctaagagttttagagtcaaaatcatcatgtaataag 314  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  24157349 tttatttgcattaatcagccaccaaaacattattgtaattagtggctgcatttgctttcattttctaagagttttagagtcaaaatcatcatgtaataag 24157250  T
Q  315 ctcatataaatagagcacgaaaatgatatgaaagggagttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggat 414  Q
    |||||||||||||||||||||||||||||| ||   ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  24157249 ctcatataaatagagcacgaaaatgatatgtaa-aaagtagaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttatggat 24157151  T
Q  415 tgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctat 514  Q
     |||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||| |    
T  24157150 cgaaccatccttgatcttatcaagaaatcat-tttcttgtggtgatcctcgcatccattgacttatcactttcttgaattagaaagtgcggcgtccctgt 24157052  T
Q  515 ctatccattccatttctt 532  Q
    ||||||||||||||||||    
T  24157051 ctatccattccatttctt 24157034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 383; E-Value: 0
Query Start/End: Original strand, 19 - 532
Target Start/End: Complemental strand, 20190924 - 20190409
Alignment:
Q  19 aaattcggaatatttaatggtgtaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaaggtg---tttgtggaattgtaac 115  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||   ||||||||||||||||    
T  20190924 aaattcggaatatttaatgttttaaaatgagttgtaagttgaaaacgtgatgaaagtgtgtaagctgaagaattaaaggtggtgtttgtggaattgtaac 20190825  T
Q  116 gtctagaaataattagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccaacttagagagtcattttgtaacatt 215  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  20190824 gtcttgaaataataagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccaacttagagagtcattttgtaatctt 20190725  T
Q  216 ttatttgcattaatcagccaccaaaacattattgtaattagtggttgcatttcctttcattttctaagagttttagagtcaaaatcatcatgtaataagc 315  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  20190724 ttatttgcattaatcagccaccaaatcattattgtaattagtggctgcatttcctttcattttctaagagttttagagtcaaaatcatcatgtaataacc 20190625  T
Q  316 tcatataaatagagcacgaaaatgatatgaaagggagttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggatt 415  Q
    ||||||||||||| ||||||||||||||| ||   ||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  20190624 tcatataaatagatcacgaaaatgatatgtaaacaagttgaactttgtagaattttacacttatgtgtattgagagctttgtctcttgtggttctggatt 20190525  T
Q  416 gaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctatc 515  Q
    |||||| ||||||||||||||||| || ||  |||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||| | ||    
T  20190524 gaaccatccttgatcttatcaagacattat-gttcttgtggcaatcctcgcttccatagacttatcagtttcttggattagaaagtgtggcgtccttgtc 20190426  T
Q  516 tatccattccatttctt 532  Q
    |||||||||||||||||    
T  20190425 tatccattccatttctt 20190409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 19 - 346
Target Start/End: Original strand, 36233498 - 36233825
Alignment:
Q  19 aaattcggaatatttaatggtgtaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaaggtgtttgtggaattgtaacgtc 118  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36233498 aaattcgaaatatttaatggtgtaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaaggtgtttgtggaattgtaacgtc 36233597  T
Q  119 tagaaataattagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccaacttagagagtcattttgtaacatttta 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36233598 tagaaataattagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccaacttagagagtcattttgtaacatttta 36233697  T
Q  219 tttgcattaatcagccaccaaaacattattgtaattagtggttgcatttcctttcattttctaagagttttagagtcaaaatcatcatgtaataagctca 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  36233698 tttgcattaatcagccaccaaaacattattgtaattagtggttgcatttcctttcattttctaagagttttagagtgaaaatcatcatgtaataagctca 36233797  T
Q  319 tataaatagagcacgaaaatgatatgaa 346  Q
    ||||||||||||||||||||||||||||    
T  36233798 tataaatagagcacgaaaatgatatgaa 36233825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 23 - 265
Target Start/End: Complemental strand, 20189287 - 20189042
Alignment:
Q  23 tcggaatatttaatggtgtaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaaggtg---tttgtggaattgtaacgtct 119  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||   ||||||||||||||||||||    
T  20189287 tcggaatatttaatggtgtaaagtgagttgtaagttgaaaacgtagttaaagtgtgtaagcttaagaattaaaggtggtgtttgtggaattgtaacgtct 20189188  T
Q  120 agaaataattagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccaacttagagagtcattttgtaacattttat 219  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20189187 agaaataataagccttcacaaatcaatgtgcaaatgaatatataacctcctcatgcattgattagccaccaacttagagagtcattttgtaaccttttat 20189088  T
Q  220 ttgcattaatcagccaccaaaacattattgtaattagtggttgcat 265  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  20189087 ttgcattaatcagccaccaaaacattattgtaattagtggttgcat 20189042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 180; E-Value: 6e-97
Query Start/End: Original strand, 345 - 532
Target Start/End: Complemental strand, 22062309 - 22062122
Alignment:
Q  345 aaagggagttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatca 444  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22062309 aaaggaagttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatca 22062210  T
Q  445 tatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctatctatccattccatttctt 532  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22062209 tatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccatttctt 22062122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 351 - 532
Target Start/End: Original strand, 20127064 - 20127245
Alignment:
Q  351 agttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttc 450  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  20127064 agttgaatattatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccatccttgatcttatcaagaaatcatatttc 20127163  T
Q  451 ttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctatctatccattccatttctt 532  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  20127164 ttgtggcgatcctcgcatccatagacttatcgctttcttggattagaaagtgtggcgtccctgtctatccattccatttctt 20127245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 158; E-Value: 9e-84
Query Start/End: Original strand, 351 - 532
Target Start/End: Original strand, 6473767 - 6473948
Alignment:
Q  351 agttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttc 450  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||| |||||    
T  6473767 agttgaattttatagaattttacacatatgtgtattgagagccttgtctcttgtggttctggattgaatcatccttgatcttatcaagaaatcacatttc 6473866  T
Q  451 ttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctatctatccattccatttctt 532  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  6473867 ttgtgacgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccatttctt 6473948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 19 - 194
Target Start/End: Original strand, 20759286 - 20759464
Alignment:
Q  19 aaattcggaatatttaatggtgtaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaag---gtgtttgtggaattgtaac 115  Q
    ||||||||||||||||||||||||||||||  ||||||||||| |  || ||||||||| ||||||||| ||||||||   |||||||||||||||||||    
T  20759286 aaattcggaatatttaatggtgtaaaatgaactgtaagttgaagatatgattaaagtgtataagctgaaaaattaaagatggtgtttgtggaattgtaac 20759385  T
Q  116 gtctagaaataattagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccaactt 194  Q
     |||| ||||||  |||||| |  |||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||    
T  20759386 atctataaataacaagccttgattaatcaatgtgcaaatgaatatgtaacatcctcatgcattgatcagcgaccaactt 20759464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 48462995 - 48463074
Alignment:
Q  19 aaattcggaatatttaatggtgtaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaaggt 98  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  48462995 aaattcggaatatttaatggtttaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaaactgaagaattaaaggt 48463074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 140 - 194
Target Start/End: Original strand, 31390245 - 31390299
Alignment:
Q  140 aatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccaactt 194  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  31390245 aatcaatgtgcaaatgaatatgtaaccttctcatgcattgatcagccaccaactt 31390299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 468 - 513
Target Start/End: Original strand, 37260438 - 37260483
Alignment:
Q  468 tccatagacttatcactttcttggattagaaagtgtggcgtcccta 513  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||    
T  37260438 tccatagacttatcattttctaggattagaaagtgtggcgtcccta 37260483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 401 - 464
Target Start/End: Original strand, 40554445 - 40554509
Alignment:
Q  401 ttgtggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc 464  Q
    |||||||||||||||||||||  | ||||||||||||||||| ||  ||||||||||||||||||    
T  40554445 ttgtggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctc 40554509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 538 - 568
Target Start/End: Original strand, 20127273 - 20127303
Alignment:
Q  538 caacaatattcataatttgcttccgacggct 568  Q
    |||||||||||||||||||||||||||||||    
T  20127273 caacaatattcataatttgcttccgacggct 20127303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 406 - 464
Target Start/End: Original strand, 48463137 - 48463195
Alignment:
Q  406 gttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctc 464  Q
    ||||||||||||||||   ||||||||||||||||| ||  ||||||||| ||||||||    
T  48463137 gttctggattgaaccattattgatcttatcaagaaaccacgtttcttgtgacgatcctc 48463195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 568
Target Start/End: Complemental strand, 22062099 - 22062062
Alignment:
Q  531 tttccatcaacaatattcataatttgcttccgacggct 568  Q
    |||||| ||||| |||||||||||||||||||||||||    
T  22062099 tttccaccaacattattcataatttgcttccgacggct 22062062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 318; Significance: 1e-179; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 19 - 422
Target Start/End: Complemental strand, 1897 - 1490
Alignment:
Q  19 aaattcggaatatttaatggtgtaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaaggtg---tttgtggaattgtaac 115  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||   ||||||||||||||||    
T  1897 aaattcggaatatttaatggtttaaaatgagttgtaatttgaaaacgtggttaaagtgtgtaagcggaagaattaaaggtggtgtttgtggaattgtaac 1798  T
Q  116 gtctagaaataattagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccaacttagagagtcattttgtaacatt 215  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |     
T  1797 gtctagaaataataagctttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccactaacttagagagtcattttgtaacctc 1698  T
Q  216 ttatttgcattaatcagccaccaaaacattattgtaattagtggttgcatttcctttcattttctaagagttttagagtcaaaatcatcatgtaataagc 315  Q
    |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1697 ttatttgcattaatcagccaccaaaacattattgtaattaatggctgcatttcctttcattttctaagagttttagagtcaaaatcatcatgtaataagc 1598  T
Q  316 tcatataaatagagcacgaaaatgatatg-aaagggagttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggat 414  Q
    ||||||||||| |||||||||||  |||| |||  |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  1597 tcatataaatatagcacgaaaattctatgtaaaaagagttgaattttatagaattttacacttatgtgtattgagagctttgtctcttatggttctggat 1498  T
Q  415 tgaaccaa 422  Q
    ||||||||    
T  1497 tgaaccaa 1490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 283; Significance: 1e-158; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 19 - 344
Target Start/End: Original strand, 8366297 - 8366625
Alignment:
Q  19 aaattcggaatatttaatggtgtaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaaggtg---tttgtggaattgtaac 115  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||    
T  8366297 aaattcggaatatttaacggtttaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaaggtggtgtttgtggaattgtaac 8366396  T
Q  116 gtctagaaataattagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccaacttagagagtcattttgtaacatt 215  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |     
T  8366397 gtctagaaataataagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccaacttagagagtcattttgtaacctc 8366496  T
Q  216 ttatttgcattaatcagccaccaaaacattattgtaattagtggttgcatttcctttcattttctaagagttttagagtcaaaatcatcatgtaataagc 315  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  8366497 ttatttgcattaatcagccaccaaaacattattgtaattagtggctgcatttcctttcattttctaagagttttagagtcaaagtcctcatgtaataagc 8366596  T
Q  316 tcatataaatagagcacgaaaatgatatg 344  Q
    |||||||||||||||||||||||||||||    
T  8366597 tcatataaatagagcacgaaaatgatatg 8366625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 352 - 532
Target Start/End: Original strand, 20730868 - 20731048
Alignment:
Q  352 gttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttct 451  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20730868 gttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttct 20730967  T
Q  452 tgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctatctatccattccatttctt 532  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  20730968 tgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattcaatttctt 20731048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 19 - 194
Target Start/End: Complemental strand, 17278169 - 17277991
Alignment:
Q  19 aaattcggaatatttaatggtgtaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaaggtg---tttgtggaattgtaac 115  Q
    |||||||||||||||| ||||||| |||||| | ||||| ||| ||||||||||||||||| |||||||||||||||||||   ||||||||||||||||    
T  17278169 aaattcggaatatttagtggtgtagaatgagctataagtagaagacgtggttaaagtgtgttagctgaagaattaaaggtggtgtttgtggaattgtaac 17278070  T
Q  116 gtctagaaataattagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccaactt 194  Q
    ||||||| ||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||    
T  17278069 gtctagacataataagccttcacaaatcaatgtgaaaatgaatatgtaaccttctcatgcattgatcagccaccaactt 17277991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 18446237 - 18446299
Alignment:
Q  469 ccatagacttatcactttcttggattagaaagtgtggcgtccctatctatccattccatttct 531  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  18446237 ccatagacttatcactttcttggattagaaagtgtggcgtccctttctttccattccatttct 18446299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 468 - 532
Target Start/End: Complemental strand, 16417600 - 16417535
Alignment:
Q  468 tccatagacttatcactttcttggattagaaagtgtggcgtccct-atctatccattccatttctt 532  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||| | || |||||||||||||||    
T  16417600 tccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttctt 16417535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 468 - 532
Target Start/End: Complemental strand, 18774349 - 18774284
Alignment:
Q  468 tccatagacttatcactttcttggattagaaagtgtggcgtccct-atctatccattccatttctt 532  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||| | || |||||||||||||||    
T  18774349 tccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttctt 18774284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 464
Target Start/End: Complemental strand, 23015870 - 23015809
Alignment:
Q  404 tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc 464  Q
    ||||||||||||||||||  | ||||||||||||||||| ||  ||||||||||||||||||    
T  23015870 tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctc 23015809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 568
Target Start/End: Original strand, 20731070 - 20731107
Alignment:
Q  531 tttccatcaacaatattcataatttgcttccgacggct 568  Q
    |||||||||||| ||||| |||||||||||||||||||    
T  20731070 tttccatcaacattattcttaatttgcttccgacggct 20731107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 283; Significance: 1e-158; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 19 - 344
Target Start/End: Complemental strand, 22300390 - 22300062
Alignment:
Q  19 aaattcggaatatttaatggtgtaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaaggtg---tttgtggaattgtaac 115  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||   ||||||||||||||||    
T  22300390 aaattcggaatatttaatggtttaaaatgagttgtaagttgaaaacgtggttaaagtgtgcaagctgaagaattaaaggtggtgtttgtggaattgtaac 22300291  T
Q  116 gtctagaaataattagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccaacttagagagtcattttgtaacatt 215  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |     
T  22300290 gtctagaaataataagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccaacttagagagtcattttgtaacctc 22300191  T
Q  216 ttatttgcattaatcagccaccaaaacattattgtaattagtggttgcatttcctttcattttctaagagttttagagtcaaaatcatcatgtaataagc 315  Q
    |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  22300190 ttatttgcattaatcagccaccaaaacattattgtaattaatggctgcatttcctttcattttctaagagttttagagtcaaagtcatcatgtaataagc 22300091  T
Q  316 tcatataaatagagcacgaaaatgatatg 344  Q
    |||||||||||||||||||||||||||||    
T  22300090 tcatataaatagagcacgaaaatgatatg 22300062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 352 - 532
Target Start/End: Original strand, 15409793 - 15409973
Alignment:
Q  352 gttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttct 451  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  15409793 gttgaatattatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccatccttgatcttatcaagaaatcatatttct 15409892  T
Q  452 tgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctatctatccattccatttctt 532  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  15409893 tgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccatttctt 15409973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 351 - 532
Target Start/End: Complemental strand, 6050381 - 6050200
Alignment:
Q  351 agttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttc 450  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  6050381 agttgaatattatagaattttacacatatgtgtattaagagctttgtctcttgtggttctggattgaaccatccttgatcttatcaagaaatcatatttc 6050282  T
Q  451 ttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctatctatccattccatttctt 532  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  6050281 ttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccatttctt 6050200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 19 - 194
Target Start/End: Complemental strand, 18535796 - 18535618
Alignment:
Q  19 aaattcggaatatttaatggtgtaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaaggtg---tttgtggaattgtaac 115  Q
    |||||||||||||||||||||| | |||||| ||||||| ||| ||||||||||||| ||| |||||||||||||||||||   ||||||||| ||||||    
T  18535796 aaattcggaatatttaatggtgcagaatgagctgtaagtagaagacgtggttaaagtatgttagctgaagaattaaaggtggtgtttgtggaaatgtaac 18535697  T
Q  116 gtctagaaataattagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccaactt 194  Q
    ||||||  ||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  18535696 gtctagccataataagcattcacaaatcaatgtgcaaatgaatatgtaaccttctcatgcattgatcagccaccaactt 18535618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 19 - 194
Target Start/End: Complemental strand, 24806778 - 24806599
Alignment:
Q  19 aaattcggaatatttaatggtgtaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaaggtg---tttgtggaattgtaac 115  Q
    |||||||||||||||||||||| | |||||| ||||||| ||| ||||||||||||| ||| |||||||||||||||||||   ||||||||||||||||    
T  24806778 aaattcggaatatttaatggtgcagaatgagctgtaagtagaagacgtggttaaagtatgttagctgaagaattaaaggtggtgtttgtggaattgtaac 24806679  T
Q  116 gtctagaa-ataattagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccaactt 194  Q
    ||||||   ||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  24806678 gtctaggccataataagccttcaaaaatcaatgtgcaaatgaatatgtaaccttctcatgcattgatcagccaccaactt 24806599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 19 - 194
Target Start/End: Complemental strand, 24808634 - 24808455
Alignment:
Q  19 aaattcggaatatttaatggtgtaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaaggtg---tttgtggaattgtaac 115  Q
    |||||||||||||||||||||  | |||||| ||||| | ||| ||||||||||||| ||| |||||||||||||||||||   ||||||||||||||||    
T  24808634 aaattcggaatatttaatggttcagaatgagctgtaattagaagacgtggttaaagtatgttagctgaagaattaaaggtggtgtttgtggaattgtaac 24808535  T
Q  116 gtctagaa-ataattagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccaactt 194  Q
    | ||||   ||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||  |||||||||||    
T  24808534 ggctaggccataataagccttcaaaaatcaatgtgcaaatgaatatgtaaccttctcatgcattgatccgccaccaactt 24808455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 351 - 532
Target Start/End: Original strand, 33809367 - 33809546
Alignment:
Q  351 agttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttc 450  Q
    ||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||| |||||  ||||| |||| |||||      ||||    ||||    
T  33809367 agttgaattttatagaattttacacatatgtgtgttgagagtcttgtctcttgtggttttggatcaaaccatccttaatctt------aaatttcttttc 33809460  T
Q  451 ttgtggcgatcctcgcatccatagacttatca--ctttcttggattagaa--agtgtggcgtccctatctatccattccatttctt 532  Q
    |||||||||||||||||||||| | |||||||  |||||||||||| |||  ||||||||| || | |||||| ||||||||||||    
T  33809461 ttgtggcgatcctcgcatccatcggcttatcattctttcttggattggaaagagtgtggcgcccttgtctatcgattccatttctt 33809546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 468 - 532
Target Start/End: Original strand, 44794775 - 44794840
Alignment:
Q  468 tccatagacttatcactttcttggattagaaagtgtggcgtccct-atctatccattccatttctt 532  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||| | || |||||||||||||||    
T  44794775 tccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttctt 44794840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 401 - 464
Target Start/End: Complemental strand, 44792948 - 44792884
Alignment:
Q  401 ttgtggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc 464  Q
    |||||||||||||||||||||  | ||||||||||||||||| ||  ||||||||||||||||||    
T  44792948 ttgtggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctc 44792884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 464
Target Start/End: Complemental strand, 24808258 - 24808197
Alignment:
Q  404 tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc 464  Q
    ||||||||||||||||||  | ||||||||||||||||| ||  ||||||||||||||||||    
T  24808258 tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctc 24808197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 538 - 570
Target Start/End: Complemental strand, 6050172 - 6050140
Alignment:
Q  538 caacaatattcataatttgcttccgacggcttc 570  Q
    |||||||||||||||||||||||||||||||||    
T  6050172 caacaatattcataatttgcttccgacggcttc 6050140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 570
Target Start/End: Original strand, 15409994 - 15410033
Alignment:
Q  531 tttccatcaacaatattcataatttgcttccgacggcttc 570  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  15409994 tttccatcaacattattcttaatttgcttccgacggcttc 15410033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 425 - 464
Target Start/End: Original strand, 31939075 - 31939114
Alignment:
Q  425 ttgatcttatcaagaaatcatatttcttgtggcgatcctc 464  Q
    ||||||||||||||||| ||| ||||||||||||||||||    
T  31939075 ttgatcttatcaagaaaccatgtttcttgtggcgatcctc 31939114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 538 - 568
Target Start/End: Complemental strand, 23732395 - 23732365
Alignment:
Q  538 caacaatattcataatttgcttccgacggct 568  Q
    |||||||||||||||||||||||||||||||    
T  23732395 caacaatattcataatttgcttccgacggct 23732365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 488 - 532
Target Start/End: Complemental strand, 23732468 - 23732424
Alignment:
Q  488 ttggattagaaagtgtggcgtccctatctatccattccatttctt 532  Q
    ||||||| ||||||||||||||||| ||||||| ||| |||||||    
T  23732468 ttggatttgaaagtgtggcgtccctgtctatccgttctatttctt 23732424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 214; Significance: 1e-117; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 19 - 267
Target Start/End: Original strand, 25531826 - 25532077
Alignment:
Q  19 aaattcggaatatttaatggtgtaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaaggtg---tttgtggaattgtaac 115  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||    
T  25531826 aaattcagaatatttaatggtttaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaaggtggtgtttgtggaattgtaac 25531925  T
Q  116 gtctagaaataattagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccaacttagagagtcattttgtaacatt 215  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |     
T  25531926 gtctagaaataataagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccaacttagagagtcattttgtaacctc 25532025  T
Q  216 ttatttgcattaatcagccaccaaaacattattgtaattagtggttgcattt 267  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  25532026 ttatttgcattaatcagccaccaaaacattattgtaattagtggctgcattt 25532077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 352 - 532
Target Start/End: Original strand, 5553466 - 5553646
Alignment:
Q  352 gttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttct 451  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  5553466 gttgaattttatagaattttacacatatgtgtattgagagctttatctcttgtggttctggattgaaccatcattgatcttatcaagaaatcatatttct 5553565  T
Q  452 tgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctatctatccattccatttctt 532  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  5553566 tgtggcgatcctcgcatacatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccatttctt 5553646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 19 - 194
Target Start/End: Complemental strand, 5554285 - 5554107
Alignment:
Q  19 aaattcggaatatttaatggtgtaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaaggtg---tttgtggaattgtaac 115  Q
    |||||||||||||||||||||| | |||||| ||||||| ||| ||||||||||||| ||| |||||||||||||||||||   ||||||||||||||||    
T  5554285 aaattcggaatatttaatggtgcagaatgagctgtaagtagaagacgtggttaaagtatgttagctgaagaattaaaggtggtgtttgtggaattgtaac 5554186  T
Q  116 gtctagaaataattagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccaactt 194  Q
    ||||||  ||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||    
T  5554185 gtctagccataataagccttcacaaatcaatgtgtaaatgaatatgtaaccttctcatgcattgatcagccaccaactt 5554107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 19 - 194
Target Start/End: Original strand, 23460392 - 23460570
Alignment:
Q  19 aaattcggaatatttaatggtgtaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaaggtg---tttgtggaattgtaac 115  Q
    |||||||||||||||||||||| | |||||| |||| || ||| ||||||||||||| ||| |||||||||||||||||||   ||||||||||||||||    
T  23460392 aaattcggaatatttaatggtgcagaatgagctgtaggtagaagacgtggttaaagtatgttagctgaagaattaaaggtggtgtttgtggaattgtaac 23460491  T
Q  116 gtctagaaataattagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccaactt 194  Q
    ||||||  ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||    
T  23460492 gtctagccataataagccttcacaaatcaatgtgcaaatgaatatgtaaccttctcatgcattgatcaaccaccaactt 23460570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 19 - 194
Target Start/End: Original strand, 16346824 - 16347002
Alignment:
Q  19 aaattcggaatatttaatggtgtaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaaggtg---tttgtggaattgtaac 115  Q
    |||||| ||||||||||||||| | |||||| ||||||| ||| ||||||||||||| ||| |||||||||||||||||||   ||||||||| ||||||    
T  16346824 aaattcagaatatttaatggtgcagaatgagctgtaagtagaagacgtggttaaagtatgttagctgaagaattaaaggtggtgtttgtggaaatgtaac 16346923  T
Q  116 gtctagaaataattagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccaactt 194  Q
    ||||||  ||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  16346924 gtctagccataataagcattcacaaatcaatgtgcaaatgaatatgtaaccttctcatgcattgatcagccaccaactt 16347002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 19 - 194
Target Start/End: Complemental strand, 47418470 - 47418292
Alignment:
Q  19 aaattcggaatatttaatggtgtaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaaggtg---tttgtggaattgtaac 115  Q
    |||||| ||||||||||||||| | |||||| ||||||| ||| ||||||||||||| ||| |||||||||||||||||||   ||||||||| ||||||    
T  47418470 aaattcagaatatttaatggtgcagaatgagctgtaagtagaagacgtggttaaagtatgttagctgaagaattaaaggtggtgtttgtggaaatgtaac 47418371  T
Q  116 gtctagaaataattagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccaactt 194  Q
    ||||||  ||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  47418370 gtctagccataataagcattcacaaatcaatgtgcaaatgaatatgtaaccttctcatgcattgatcagccaccaactt 47418292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 351 - 532
Target Start/End: Complemental strand, 17236996 - 17236821
Alignment:
Q  351 agttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttc 450  Q
    ||||||||||| ||||||||||||| ||||||||| ||||| |||||||||||||||||||| ||||||||       ||||||||| |||||| |||||    
T  17236996 agttgaattttgtagaattttacacttatgtgtatcgagagttttgtctcttgtggttctggtttgaaccat------tcttatcaaaaaatcacatttc 17236903  T
Q  451 ttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctatctatccattccatttctt 532  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||| ||||| ||| |||||||||||||||    
T  17236902 ttgtggcgatcctcgcatcgataaacttatcactttcttggattaaaaagtgtggcatccctgtctgtccattccatttctt 17236821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 383 - 509
Target Start/End: Original strand, 22271157 - 22271285
Alignment:
Q  383 tattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatc--ctcgcatccatagacttat 480  Q
    ||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||    
T  22271157 tattgagagttttgtctcttgtggttctggattgaaccatcattgatcttatcaagaaatcacatttcttgtggcgatcatctcgcatccatagacttat 22271256  T
Q  481 cactttcttggattagaaagtgtggcgtc 509  Q
    |||||||| ||||||||||||||||||||    
T  22271257 cactttctgggattagaaagtgtggcgtc 22271285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 27 - 190
Target Start/End: Original strand, 47566673 - 47566839
Alignment:
Q  27 aatatttaatggtgtaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaa---ggtgtttgtggaattgtaacgtctagaa 123  Q
    |||||||||||||||| |||||| ||||||||||| ||||| |||||||||| ||| ||||||||||||   |||||||||||||||||||  |||||||    
T  47566673 aatatttaatggtgtagaatgagctgtaagttgaagacgtgattaaagtgtgcaagttgaagaattaaaagtggtgtttgtggaattgtaatttctagaa 47566772  T
Q  124 ataattagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccacca 190  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| |||| |||||||| | ||||||    
T  47566773 ataataagctttcacaaatcaatgtgcaaatgaatatgtaaccttctcaagcattgatcaaccacca 47566839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 235 - 352
Target Start/End: Original strand, 2693788 - 2693908
Alignment:
Q  235 accaaaacattattgtaattagtggttgcatttcctttcattttctaagagttttagagtcaaaa---tcatcatgtaataagctcatataaatagagca 331  Q
    |||||||||| |||| ||||||||||||||||| |||| ||||||||||||||| ||| ||||||    ||||||||| ||||| || ||||| ||  ||    
T  2693788 accaaaacataattgcaattagtggttgcatttacttttattttctaagagtttcagaatcaaaacctgcatcatgtactaagcccacataaagaggaca 2693887  T
Q  332 cgaaaatgatatgaaagggag 352  Q
    |||||||||||||||||||||    
T  2693888 cgaaaatgatatgaaagggag 2693908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 478 - 532
Target Start/End: Original strand, 23433138 - 23433192
Alignment:
Q  478 tatcactttcttggattagaaagtgtggcgtccctatctatccattccatttctt 532  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  23433138 tatcactttcttggattagaaagtgtggcgtccatgtctatccattccatttctt 23433192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 404 - 531
Target Start/End: Complemental strand, 16019556 - 16019432
Alignment:
Q  404 tggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgt 503  Q
    ||||||||||||  |||||  |||||| |||||||||  |   |||||||||| |||||||    ||| |||||||||||||||||||||||||||||||    
T  16019556 tggttctggatttgaccaattttgatcatatcaagaatcc---tttcttgtggtgatcctcaatcccagagacttatcactttcttggattagaaagtgt 16019460  T
Q  504 ggcgtccctatctatccattccatttct 531  Q
     | |||||| ||| ||||||||||||||    
T  16019459 agtgtccctttctttccattccatttct 16019432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 468 - 532
Target Start/End: Complemental strand, 13179935 - 13179870
Alignment:
Q  468 tccatagacttatcactttcttggattagaaagtgtggcgtccct-atctatccattccatttctt 532  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||| | || |||||||||||||||    
T  13179935 tccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttctt 13179870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 468 - 532
Target Start/End: Complemental strand, 13184593 - 13184528
Alignment:
Q  468 tccatagacttatcactttcttggattagaaagtgtggcgtccct-atctatccattccatttctt 532  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||| | || |||||||||||||||    
T  13184593 tccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttctt 13184528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 5553388 - 5553467
Alignment:
Q  19 aaattcggaatatttaatggtgtaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaaggt 98  Q
    ||||||| |||||||||||||| | |||||| ||||||| ||| |||||||| |||| ||| || |||||||||||||||    
T  5553388 aaattcgaaatatttaatggtgcagaatgagctgtaagtagaagacgtggttgaagtatgttagttgaagaattaaaggt 5553467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 471 - 532
Target Start/End: Complemental strand, 33758011 - 33757949
Alignment:
Q  471 atagacttatcactttcttggattagaaagtgtggcgtccct-atctatccattccatttctt 532  Q
    |||||||||||| ||||| ||||||||||||||||||||||| | || |||||||||||||||    
T  33758011 atagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttctt 33757949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 405 - 500
Target Start/End: Complemental strand, 13957070 - 13956976
Alignment:
Q  405 ggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatca--ctttcttggattagaaag 500  Q
    |||||||||||| |||||   |||||||||||||||||| | |||||||||| ||||||  ||||||||| |||||||  || |||||||||||||||    
T  13957070 ggttctggattggaccaaaactgatcttatcaagaaatcct-tttcttgtggtgatcct--catccataggcttatcattctctcttggattagaaag 13956976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 405 - 500
Target Start/End: Original strand, 15381933 - 15382027
Alignment:
Q  405 ggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatca--ctttcttggattagaaag 500  Q
    |||||||||||| |||||   |||||||||||||||||| | |||||||||| ||||||  ||||||||| |||||||  || |||||||||||||||    
T  15381933 ggttctggattggaccaaaactgatcttatcaagaaatcct-tttcttgtggtgatcct--catccataggcttatcattctctcttggattagaaag 15382027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 405 - 500
Target Start/End: Original strand, 15387669 - 15387763
Alignment:
Q  405 ggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatca--ctttcttggattagaaag 500  Q
    |||||||||||| |||||   |||||||||||||||||| | |||||||||| ||||||  ||||||||| |||||||  || |||||||||||||||    
T  15387669 ggttctggattggaccaaaactgatcttatcaagaaatcct-tttcttgtggtgatcct--catccataggcttatcattctctcttggattagaaag 15387763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 385
Target Start/End: Complemental strand, 16345425 - 16345391
Alignment:
Q  351 agttgaattttatagaattttacacatatgtgtat 385  Q
    |||||||||||||||||||||||||||||||||||    
T  16345425 agttgaattttatagaattttacacatatgtgtat 16345391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 229 - 288
Target Start/End: Original strand, 2683933 - 2683989
Alignment:
Q  229 tcagccaccaaaacattattgtaattagtggttgcatttcctttcattttctaagagttt 288  Q
    ||||||||||||||||||||| |||||   | ||||||||| ||||||||||||||||||    
T  2683933 tcagccaccaaaacattattgaaatta---gctgcatttccgttcattttctaagagttt 2683989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 464
Target Start/End: Original strand, 16347198 - 16347259
Alignment:
Q  404 tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc 464  Q
    ||||||||||||||||||  | ||||||||||||||||| ||  ||||||||||||||||||    
T  16347198 tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctc 16347259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 464
Target Start/End: Complemental strand, 47418097 - 47418036
Alignment:
Q  404 tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc 464  Q
    ||||||||||||||||||  | ||||||||||||||||| ||  ||||||||||||||||||    
T  47418097 tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctc 47418036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 500
Target Start/End: Complemental strand, 13962803 - 13962709
Alignment:
Q  405 ggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatca--ctttcttggattagaaag 500  Q
    |||||||||||| | |||   |||||||||||||||||| | |||||||||| ||||||  ||||||||| |||||||  || |||||||||||||||    
T  13962803 ggttctggattggatcaaaactgatcttatcaagaaatcct-tttcttgtggtgatcct--catccataggcttatcattctctcttggattagaaag 13962709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 568
Target Start/End: Original strand, 5553668 - 5553705
Alignment:
Q  531 tttccatcaacaatattcataatttgcttccgacggct 568  Q
    |||||||||||| ||||| |||||||||||||||||||    
T  5553668 tttccatcaacattattcttaatttgcttccgacggct 5553705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 176; Significance: 2e-94; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 345 - 532
Target Start/End: Complemental strand, 20419803 - 20419616
Alignment:
Q  345 aaagggagttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatca 444  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20419803 aaagggagttgaattttatagaattttacacatatgtgtattgagagtcttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatca 20419704  T
Q  445 tatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctatctatccattccatttctt 532  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  20419703 tatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccatttctt 20419616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 351 - 532
Target Start/End: Original strand, 18781746 - 18781927
Alignment:
Q  351 agttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttc 450  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18781746 agttgaatattatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttc 18781845  T
Q  451 ttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctatctatccattccatttctt 532  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  18781846 ttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccatttctt 18781927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 345 - 532
Target Start/End: Complemental strand, 20415070 - 20414883
Alignment:
Q  345 aaagggagttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatca 444  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20415070 aaagggagttgaattttatagaattttacacatatgtgtattgagagccttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatca 20414971  T
Q  445 tatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctatctatccattccatttctt 532  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||    
T  20414970 tatttcttgtggcgatcctcgcatccatagacttatcactttcttagattagaaagtgtggcgtccctgtctatccattcaatttctt 20414883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 352 - 532
Target Start/End: Complemental strand, 30518442 - 30518262
Alignment:
Q  352 gttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttct 451  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  30518442 gttgaatattatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccatccttgatcttatcaagaaatcatatttct 30518343  T
Q  452 tgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctatctatccattccatttctt 532  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  30518342 tgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccatttcatttctt 30518262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 351 - 532
Target Start/End: Original strand, 18553332 - 18553511
Alignment:
Q  351 agttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttc 450  Q
    |||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18553332 agttgaattttatagaattttacacat--gtgtattgagagccttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttc 18553429  T
Q  451 ttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctatctatccattccatttctt 532  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  18553430 ttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatcaattccatttctt 18553511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 380 - 532
Target Start/End: Complemental strand, 20417682 - 20417530
Alignment:
Q  380 gtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagactta 479  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20417682 gtgtattgagagccttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagactta 20417583  T
Q  480 tcactttcttggattagaaagtgtggcgtccctatctatccattccatttctt 532  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  20417582 tcactttcttggattagaaagtgtggcgtccctgtctatcaattccatttctt 20417530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 351 - 532
Target Start/End: Complemental strand, 6230794 - 6230613
Alignment:
Q  351 agttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttc 450  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  6230794 agttgaattttgtagaattttacacatatgtgtattgagagttttgactcttgtggttctggattgaaccatccttgatcttatcaagaaatcacatttc 6230695  T
Q  451 ttgtggcgatcctcgcatccatagacttatca--ctttcttggattagaaagtgtggcgtccctatctatccattccatttctt 532  Q
    || |||||||| |  ||||||| | |||||||  |||| |||||||  |||| |||  |  ||| |||||||||||||||||||    
T  6230694 ttatggcgatctt--catccatcggcttatcattcttttttggattgaaaagagtgtggcgcctgtctatccattccatttctt 6230613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 351 - 443
Target Start/End: Complemental strand, 20417775 - 20417683
Alignment:
Q  351 agttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatc 443  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20417775 agttgaattttatagaattttacacatatgtgtattgagagccttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatc 20417683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 468 - 532
Target Start/End: Complemental strand, 21299442 - 21299377
Alignment:
Q  468 tccatagacttatcactttcttggattagaaagtgtggcgtccct-atctatccattccatttctt 532  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||| | || |||||||||||||||    
T  21299442 tccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttctt 21299377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 531 - 571
Target Start/End: Complemental strand, 20414861 - 20414821
Alignment:
Q  531 tttccatcaacaatattcataatttgcttccgacggcttca 571  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  20414861 tttccaccaacaatattcataatttgcttccgacggcttca 20414821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 531 - 571
Target Start/End: Complemental strand, 20419594 - 20419554
Alignment:
Q  531 tttccatcaacaatattcataatttgcttccgacggcttca 571  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  20419594 tttccaccaacaatattcataatttgcttccgacggcttca 20419554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 471 - 529
Target Start/End: Original strand, 12639527 - 12639586
Alignment:
Q  471 atagacttatcactttcttggattagaaagtgtggcgtccct-atctatccattccattt 529  Q
    |||||||||||| ||||| ||||||||||||||||||||||| | || ||||||||||||    
T  12639527 atagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccattt 12639586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 464
Target Start/End: Complemental strand, 2147908 - 2147847
Alignment:
Q  404 tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc 464  Q
    ||||||||||||||||||  | ||||||||||||||||| ||  ||||||||||||||||||    
T  2147908 tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctc 2147847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 538 - 570
Target Start/End: Complemental strand, 30518234 - 30518202
Alignment:
Q  538 caacaatattcataatttgcttccgacggcttc 570  Q
    |||||||||||||||||||||||||||||||||    
T  30518234 caacaatattcataatttgcttccgacggcttc 30518202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 568
Target Start/End: Original strand, 18553534 - 18553571
Alignment:
Q  531 tttccatcaacaatattcataatttgcttccgacggct 568  Q
    |||||| ||||| |||||||||||||||||||||||||    
T  18553534 tttccaccaacattattcataatttgcttccgacggct 18553571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 568
Target Start/End: Complemental strand, 20417507 - 20417470
Alignment:
Q  531 tttccatcaacaatattcataatttgcttccgacggct 568  Q
    |||||| ||||| |||||||||||||||||||||||||    
T  20417507 tttccaccaacattattcataatttgcttccgacggct 20417470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 172; Significance: 4e-92; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 345 - 532
Target Start/End: Original strand, 54758 - 54945
Alignment:
Q  345 aaagggagttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatca 444  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54758 aaaggaagttgaattttatagaattttacacatatgtgtattgagagccttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatca 54857  T
Q  445 tatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctatctatccattccatttctt 532  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  54858 tatttcttgtggcgatactcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctatatatccattccatttctt 54945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 568
Target Start/End: Original strand, 54967 - 55004
Alignment:
Q  531 tttccatcaacaatattcataatttgcttccgacggct 568  Q
    |||||||||||| ||||| |||||||||||||||||||    
T  54967 tttccatcaacattattcttaatttgcttccgacggct 55004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 166; Significance: 1e-88; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 351 - 532
Target Start/End: Complemental strand, 25919 - 25738
Alignment:
Q  351 agttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttc 450  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  25919 agttgaattttatagaattttacacatatgtgtagtgagagctttgtctcttgtagttctggattgaaccaaccttgatcttatcaagaaatcatatttc 25820  T
Q  451 ttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctatctatccattccatttctt 532  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  25819 ttgtggcgatcctcgcatccatatacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccatttctt 25738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 162; Significance: 4e-86; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 351 - 532
Target Start/End: Original strand, 136750 - 136931
Alignment:
Q  351 agttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttc 450  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  136750 agttgaatattatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattaaaccatccttgatcttatcaagaaatcatatttc 136849  T
Q  451 ttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctatctatccattccatttctt 532  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  136850 ttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccaatccatttctt 136931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 158; Significance: 9e-84; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 158; E-Value: 9e-84
Query Start/End: Original strand, 355 - 532
Target Start/End: Complemental strand, 1027 - 850
Alignment:
Q  355 gaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgt 454  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  1027 gaatattatagaattttacacatatgtgtattgagaactttgtctcttgtggttctggattgaaccatccttgatcttatcaagaaatcatatttcttgt 928  T
Q  455 ggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctatctatccattccatttctt 532  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  927 ggcgatcctctcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccatttctt 850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 157; Significance: 3e-83; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 351 - 531
Target Start/End: Complemental strand, 4752 - 4572
Alignment:
Q  351 agttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttc 450  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4752 agttgaatattatagaattttacacatatgtgtattgagagccttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttc 4653  T
Q  451 ttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctatctatccattccatttct 531  Q
    ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  4652 ttgcggcgatccttgcatccatagacttatcactttcttggattagaaagtgtggcatccctgtctatccattccatttct 4572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 568
Target Start/End: Complemental strand, 4549 - 4512
Alignment:
Q  531 tttccatcaacaatattcataatttgcttccgacggct 568  Q
    |||||| ||||| |||||||||||||||||||||||||    
T  4549 tttccaccaacattattcataatttgcttccgacggct 4512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 150; Significance: 5e-79; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 351 - 532
Target Start/End: Original strand, 33211 - 33391
Alignment:
Q  351 agttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttc 450  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||    
T  33211 agttgaattttgtagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccatccttgatcttatcaagaaattat-tttc 33309  T
Q  451 ttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctatctatccattccatttctt 532  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  33310 ttgtggcgatcctcgcatccatagacttatcaatttcttggattagaaagtgtggcgtccctgtctatcaattccatttctt 33391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 142; Significance: 3e-74; HSPs: 4)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 351 - 532
Target Start/End: Original strand, 6609 - 6789
Alignment:
Q  351 agttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttc 450  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||| |  | ||||    
T  6609 agttgaattttatagaattttacacttatgtgtattgagagctttgtctcttgtggttttggattgaaccattcttgatcttatcaagaattttt-tttc 6707  T
Q  451 ttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctatctatccattccatttctt 532  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  6708 ttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccatttctt 6789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146; HSP #2
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 351 - 532
Target Start/End: Original strand, 9504 - 9684
Alignment:
Q  351 agttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttc 450  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||| |  | ||||    
T  9504 agttgaatttgatagaattttacacttatgtgtattgagagctttgtctcttgtggttctggattgaaccattcttgttcttatcaagaatttct-tttc 9602  T
Q  451 ttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctatctatccattccatttctt 532  Q
    |||||| ||||||||||||||  |||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||    
T  9603 ttgtggggatcctcgcatccaccgacttatcactttcttggattagaaagtgtggtgtccctgtctatccattccatatctt 9684  T

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Target: scaffold0146; HSP #3
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 351 - 532
Target Start/End: Original strand, 17171 - 17351
Alignment:
Q  351 agttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttc 450  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||| |  | ||||    
T  17171 agttgaatttgatagaattttacacttatgtgtattgagagctttgtctcttgtggttctggattgaaccattcttgttcttatcaagaatttct-tttc 17269  T
Q  451 ttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctatctatccattccatttctt 532  Q
    |||||| ||||||||||||||  |||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||    
T  17270 ttgtggggatcctcgcatccaccgacttatcactttcttggattagaaagtgtggtgtccctgtctatccattccatatctt 17351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 27480 - 27520
Alignment:
Q  154 tgaatatgtaacctcctcatgcattgattagccaccaactt 194  Q
    |||||||||||||| ||||||||||||| ||||||||||||    
T  27480 tgaatatgtaaccttctcatgcattgatcagccaccaactt 27520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 131; Significance: 1e-67; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 394 - 532
Target Start/End: Complemental strand, 22730 - 22592
Alignment:
Q  394 ttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggat 493  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22730 ttgtctcttgtggttctggattgaaccatccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggat 22631  T
Q  494 tagaaagtgtggcgtccctatctatccattccatttctt 532  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  22630 tagaaagtgtggcgtccctgtctatccattccatttctt 22592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 570
Target Start/End: Complemental strand, 22571 - 22532
Alignment:
Q  531 tttccatcaacaatattcataatttgcttccgacggcttc 570  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  22571 tttccatcaacattattcttaatttgcttccgacggcttc 22532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 131; Significance: 1e-67; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 19 - 188
Target Start/End: Original strand, 86769 - 86941
Alignment:
Q  19 aaattcggaatatttaatggtgtaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaa---ggtgtttgtggaattgtaac 115  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||   ||||||||||||||||||||    
T  86769 aaattcggaatatttaatggtgtaaaatgagttgtaagctgaaaacgtggttaaagtgagtaagctgaagaattaaaggtggtgtttgtggaattgtaac 86868  T
Q  116 gtctagaaataattagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccac 188  Q
    ||||| ||||||| |||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||    
T  86869 gtctataaataataagccttcacaaatcaatgtgaaaatcaatatgtaacctcctcatccattgattagccac 86941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 117; Significance: 3e-59; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 19 - 194
Target Start/End: Original strand, 55047 - 55225
Alignment:
Q  19 aaattcggaatatttaatggtgtaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaaggtg---tttgtggaattgtaac 115  Q
    |||||||||||||||||||||| | |||||| ||||||| ||| ||||||||||||| ||| |||||||||||||||||||   ||||||||||||||||    
T  55047 aaattcggaatatttaatggtgcagaatgagctgtaagtagaagacgtggttaaagtatgttagctgaagaattaaaggtggtgtttgtggaattgtaac 55146  T
Q  116 gtctagaaataattagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccaactt 194  Q
    ||||||  ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  55147 gtctagccataataagccttcacaaatcaatgtgcaaatgaatatgtaaccttctcatgcattgatcagccaccaactt 55225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 464
Target Start/End: Original strand, 55425 - 55486
Alignment:
Q  404 tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc 464  Q
    ||||||||||||||||||  | ||||||| ||||||||| ||  ||||||||||||||||||    
T  55425 tggttctggattgaaccatgcattgatctcatcaagaaaccacgtttcttgtggcgatcctc 55486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 113; Significance: 6e-57; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 19 - 194
Target Start/End: Original strand, 241236 - 241414
Alignment:
Q  19 aaattcggaatatttaatggtgtaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaaggtg---tttgtggaattgtaac 115  Q
    |||||||||||||||| ||||||| |||||| | ||||| ||| ||||||||||||||||| |||||||||||||||||||   ||||||||||||||||    
T  241236 aaattcggaatatttagtggtgtagaatgagctataagtagaagacgtggttaaagtgtgttagctgaagaattaaaggtggtgtttgtggaattgtaac 241335  T
Q  116 gtctagaaataattagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccaactt 194  Q
    ||||||| ||||| |||||||| |||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||    
T  241336 gtctagacataataagccttcaaaaatcaatgtgcaaatgaatatataaccttctcatgcattgatcagccaccaactt 241414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 464
Target Start/End: Original strand, 241614 - 241675
Alignment:
Q  404 tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc 464  Q
    ||||||||||||||||||  | ||||||||||||||||| ||  |||||||||| |||||||    
T  241614 tggttctggattgaaccatgcgttgatcttatcaagaaaccacgtttcttgtggtgatcctc 241675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 90; Significance: 3e-43; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 19 - 194
Target Start/End: Complemental strand, 578 - 399
Alignment:
Q  19 aaattcggaatatttaatggtgtaaaatgagttgtaagttgaaaacgtggttaaagtgtgtaagctgaagaattaaaggtg---tttgtggaattgtaac 115  Q
    |||||||||||||||||||||  | |||||| ||||| | ||| ||||||||||||| ||| |||||||||||||||||||   ||||||||||||||||    
T  578 aaattcggaatatttaatggttcagaatgagctgtaattagaagacgtggttaaagtatgttagctgaagaattaaaggtggtgtttgtggaattgtaac 479  T
Q  116 gtctagaa-ataattagccttcacaaatcaatgtgcaaatgaatatgtaacctcctcatgcattgattagccaccaactt 194  Q
    | ||||   ||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||  |||||||||||    
T  478 ggctaggccataataagccttcaaaaatcaatgtgcaaatgaatatgtaaccttctcatgcattgatccgccaccaactt 399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 464
Target Start/End: Complemental strand, 202 - 141
Alignment:
Q  404 tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc 464  Q
    ||||||||||||||||||  | ||||||||||||||||| ||  ||||||||||||||||||    
T  202 tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctc 141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 468 - 532
Target Start/End: Complemental strand, 8812 - 8747
Alignment:
Q  468 tccatagacttatcactttcttggattagaaagtgtggcgtccct-atctatccattccatttctt 532  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||| | || |||||||||||||||    
T  8812 tccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttctt 8747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 468 - 532
Target Start/End: Original strand, 288993 - 289058
Alignment:
Q  468 tccatagacttatcactttcttggattagaaagtgtggcgtccct-atctatccattccatttctt 532  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||| | || |||||||||||||||    
T  288993 tccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttctt 289058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 468 - 513
Target Start/End: Original strand, 2155 - 2200
Alignment:
Q  468 tccatagacttatcactttcttggattagaaagtgtggcgtcccta 513  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||    
T  2155 tccatagacttatcattttctaggattagaaagtgtggcgtcccta 2200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 468 - 513
Target Start/End: Complemental strand, 33824 - 33779
Alignment:
Q  468 tccatagacttatcactttcttggattagaaagtgtggcgtcccta 513  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||    
T  33824 tccatagacttatcattttctaggattagaaagtgtggcgtcccta 33779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 464
Target Start/End: Complemental strand, 24372 - 24311
Alignment:
Q  404 tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc 464  Q
    ||||||||||||||||||  | ||||||||||||||||| ||  ||||||||||||||||||    
T  24372 tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctc 24311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 464
Target Start/End: Complemental strand, 10911 - 10850
Alignment:
Q  404 tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc 464  Q
    ||||||||||||||||||  | ||||||||||||||||| ||  ||||||||||||||||||    
T  10911 tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctc 10850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 464
Target Start/End: Original strand, 6465 - 6526
Alignment:
Q  404 tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc 464  Q
    ||||||||||||||||||  | ||||||||||||||||| ||  ||||||||||||||||||    
T  6465 tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctc 6526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 464
Target Start/End: Complemental strand, 374851 - 374790
Alignment:
Q  404 tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc 464  Q
    ||||||||||||||||||  | ||||||||||||||||| ||  ||||||||||||||||||    
T  374851 tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctc 374790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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