View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5717_high_22 (Length: 481)
Name: NF5717_high_22
Description: NF5717
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5717_high_22 |
 |  |
|
| [»] scaffold0311 (4 HSPs) |
 |  |  |
|
| [»] scaffold0057 (1 HSPs) |
 |  |  |
|
| [»] scaffold0006 (1 HSPs) |
 |  |  |
|
| [»] scaffold0189 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr6 (Bit Score: 393; Significance: 0; HSPs: 10)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 393; E-Value: 0
Query Start/End: Original strand, 1 - 464
Target Start/End: Complemental strand, 8915662 - 8915193
Alignment:
| Q |
1 |
aagagagaaagcataagagtactcgtgtgggagatactcatagaaactcattatagaaatgaatagattaataaaagatgctaaatgagtacatactaat |
100 |
Q |
| |
|
||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || | |
|
|
| T |
8915662 |
aagagagcaagcataagagtactcgtgtggaagatactcatagaaacttattatagaaatgaatagattaataaaagatgctaaatgagtacataatagt |
8915563 |
T |
 |
| Q |
101 |
ccttatttataggacttaatggactaaccaattgtttaattaacttccaactccacaaactaacttataactaactattaagtaatcctaattaaccaac |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8915562 |
ccttatttataggacttaatggactaaccaattgtttaattaacttccaactccacgaactaacttataactaactattaagtaatcctaattaaccaac |
8915463 |
T |
 |
| Q |
201 |
tgaatcctaagaatcttaacacactatgataatgtcacaaattgtttaatgacactttgattcattgtgaccttaggatctgtgcttccatgtaatgttt |
300 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |
|
|
| T |
8915462 |
tgaatcctaagaatcttaacacactgtgataatgtcacaaattgtttaatgacactttgatt-tttgtgaccttaggatctgtgcttccatgtaatgtat |
8915364 |
T |
 |
| Q |
301 |
at-------acttggtctaatagacaaattgacgaggatcgtattaaggaacaaatcgatatattttgtattaataacgcaattttatgatcaagtaatt |
393 |
Q |
| |
|
|| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8915363 |
atacttggaacttggtctaatagacaaattgacaaggatcgtattaaggaacaaattgatatattttgtattaataacgcaattttatgatcaagtaatt |
8915264 |
T |
 |
| Q |
394 |
tagtttaattttccattttgaacactacacttttaaaatttgcaaatttattgatcttggctagttaattt |
464 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8915263 |
tagtttaattttccattttgaacactacacttttaaaatttgcaaatttattgatcttggctagttaattt |
8915193 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 9 - 222
Target Start/End: Original strand, 20985853 - 20986066
Alignment:
| Q |
9 |
aagcataagagtactcgtgtgggagatactcatagaaactcattatagaaatgaatagattaataaaagatgctaaatgagtacatactaatccttattt |
108 |
Q |
| |
|
|||||||||||||||| ||||| ||||||| ||| ||| |||||||||||||||||||||| ||||||||| |||||||||||||||| ||| ||||| |
|
|
| T |
20985853 |
aagcataagagtactcatgtggtagatacttataaaaattcattatagaaatgaatagattgataaaagatagcaaatgagtacatactagtccatattt |
20985952 |
T |
 |
| Q |
109 |
ataggacttaatggactaaccaattgtttaattaacttccaactccacaaactaacttataactaactattaagtaatcctaattaaccaactgaatcct |
208 |
Q |
| |
|
|||||||||||||||||||| || ||| ||| ||||||| |||||||| ||||||||| |||||||||||||| ||||| |||||||| |||| |||||| |
|
|
| T |
20985953 |
ataggacttaatggactaacaaactgtgtaactaacttctaactccactaactaacttgtaactaactattaactaatcttaattaacaaactaaatcct |
20986052 |
T |
 |
| Q |
209 |
aagaatcttaacac |
222 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
20986053 |
aagaatcttaacac |
20986066 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 5377064 - 5376980
Alignment:
| Q |
9 |
aagcataagagtactcgtgtgggagatactcatagaaactcattatagaaatgaatagattaataaaagatgctaaatgagtaca |
93 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||| | |||||||||| |
|
|
| T |
5377064 |
aagcataagagtactcatgtgggagatactcatagaaactcattgtagaaatgaatagattgataaaagatattgaatgagtaca |
5376980 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 5378919 - 5378835
Alignment:
| Q |
9 |
aagcataagagtactcgtgtgggagatactcatagaaactcattatagaaatgaatagattaataaaagatgctaaatgagtaca |
93 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||| | |||||||||| |
|
|
| T |
5378919 |
aagcataagagtactcatgtgggagatactcatagaaactcattgtagaaatgaatagattgataaaagatattgaatgagtaca |
5378835 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 1088701 - 1088782
Alignment:
| Q |
12 |
cataagagtactcgtgtgggagatactcata-gaaactcattatagaaatgaatagattaataaaagatgctaaatgagtaca |
93 |
Q |
| |
|
||||||||||||| | ||||||||||||| | |||||||||||||||| |||||||||| |||||||||| | |||||||||| |
|
|
| T |
1088701 |
cataagagtactcatatgggagatactcaaaagaaactcattatagaa-tgaatagattgataaaagatgatgaatgagtaca |
1088782 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 19645349 - 19645429
Alignment:
| Q |
13 |
ataagagtactcgtgtgggagatactcatagaaactcattatagaaatgaatagattaataaaagatgctaaatgagtaca |
93 |
Q |
| |
|
|||||||||||| || |||||||||||| ||||| ||||| ||||||| |||||||| ||||||||| | |||||||||| |
|
|
| T |
19645349 |
ataagagtactcatgagggagatactcaaagaaattcattgtagaaataaatagattgataaaagataatgaatgagtaca |
19645429 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 9415251 - 9415205
Alignment:
| Q |
12 |
cataagagtactcgtgtgggagatactcatagaaactcattatagaa |
58 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||| ||||| |
|
|
| T |
9415251 |
cataagagtactcatgtgggagatactcatagaaactcattgtagaa |
9415205 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 15149108 - 15149167
Alignment:
| Q |
34 |
atactcatagaaactcattatagaaatgaatagattaataaaagatgctaaatgagtaca |
93 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||| ||||||||| | |||||||||| |
|
|
| T |
15149108 |
atactcaaagaaactcattgtagaaatgaatagattgataaaagataatgaatgagtaca |
15149167 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 24544805 - 24544763
Alignment:
| Q |
9 |
aagcataagagtactcgtgtgggagatactcatagaaactcat |
51 |
Q |
| |
|
|||||||||||||||| || ||||||||||||||||||||||| |
|
|
| T |
24544805 |
aagcataagagtactcatgagggagatactcatagaaactcat |
24544763 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 30488621 - 30488552
Alignment:
| Q |
9 |
aagcataagagtactcgtgtgggagatactcatagaaactcattatagaaatgaatagattaataaaagat |
79 |
Q |
| |
|
|||||||| | ||||| ||||| |||||| ||| ||||||||||||| |||||||||||| ||||||||| |
|
|
| T |
30488621 |
aagcataaaaatactcatgtggaagataccgataaaaactcattatag-aatgaatagattgataaaagat |
30488552 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 92; Significance: 2e-44; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 102 - 221
Target Start/End: Complemental strand, 18776857 - 18776738
Alignment:
| Q |
102 |
cttatttataggacttaatggactaaccaattgtttaattaacttccaactccacaaactaacttataactaactattaagtaatcctaattaaccaact |
201 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
18776857 |
cttatttataggacttaatggactaaccaattgtgtaactaacttccaactccactaactaacttgtaactaactattaactaatcctaattaaccaact |
18776758 |
T |
 |
| Q |
202 |
gaatcctaagaatcttaaca |
221 |
Q |
| |
|
|||| |||||||||||||| |
|
|
| T |
18776757 |
taatcttaagaatcttaaca |
18776738 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 29758306 - 29758222
Alignment:
| Q |
9 |
aagcataagagtactcgtgtgggagatactcatagaaactcattatagaaatgaatagattaataaaagatgctaaatgagtaca |
93 |
Q |
| |
|
|||||||||||||||| || |||||||||||| || |||||||| |||||||||||||||| ||||||||| | |||||||||| |
|
|
| T |
29758306 |
aagcataagagtactcatgagggagatactcaaagtaactcattgtagaaatgaatagattgataaaagataatgaatgagtaca |
29758222 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 8759115 - 8759193
Alignment:
| Q |
15 |
aagagtactcgtgtgggagatactcatagaaactcattatagaaatgaatagattaataaaagatgctaaatgagtaca |
93 |
Q |
| |
|
|||||||||| || |||||||||||| ||||||||||| |||||||||| ||||| |||||||||| | |||||||||| |
|
|
| T |
8759115 |
aagagtactcatgagggagatactcaaagaaactcattgtagaaatgaacagattgataaaagatgatgaatgagtaca |
8759193 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 18612085 - 18612153
Alignment:
| Q |
9 |
aagcataagagtactcgtgtgggagatactcatagaaactcattatagaaatgaatagattaataaaag |
77 |
Q |
| |
|
|||||||||||||||| ||||||||||| | | | |||||||||||||||||||||||||| ||||||| |
|
|
| T |
18612085 |
aagcataagagtactcatgtgggagatatttacaaaaactcattatagaaatgaatagattgataaaag |
18612153 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 83; Significance: 4e-39; HSPs: 9)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 83 - 221
Target Start/End: Complemental strand, 27737895 - 27737757
Alignment:
| Q |
83 |
aaatgagtacatactaatccttatttataggacttaatggactaaccaattgtttaattaacttccaactccacaaactaacttataactaactattaag |
182 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||| |
|
|
| T |
27737895 |
aaatgagtacatactagtccttatttataggacttattggactaaccaattgtgtaactaacttcaaactccactaactaacttgtaactaactattaac |
27737796 |
T |
 |
| Q |
183 |
taatcctaattaaccaactgaatcctaagaatcttaaca |
221 |
Q |
| |
|
||| |||||||||| | ||||||||||||||||||| |
|
|
| T |
27737795 |
taaccctaattaacactttaaatcctaagaatcttaaca |
27737757 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 56074691 - 56074762
Alignment:
| Q |
9 |
aagcataagagtactcgtgtgggagatactcatagaaactcattatagaaatgaatagattaataaaagatg |
80 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| | |||||||||| |
|
|
| T |
56074691 |
aagcataagagtactcatgtgggagatactcatagaaactcgttatagaaatgaatagaatgataaaagatg |
56074762 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 10 - 79
Target Start/End: Original strand, 52545149 - 52545217
Alignment:
| Q |
10 |
agcataagagtactcgtgtgggagatactcatagaaactcattatagaaatgaatagattaataaaagat |
79 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |
|
|
| T |
52545149 |
agcataagagtactcatgtgggagatactcatagaaactcattatag-aatgaatagattgataaaagat |
52545217 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 18656294 - 18656210
Alignment:
| Q |
9 |
aagcataagagtactcgtgtgggagatactcatagaaactcattatagaaatgaatagattaataaaagatgctaaatgagtaca |
93 |
Q |
| |
|
|||||||||||||||| || |||||||||||| || |||||||| |||||||||||||||| |||||||||| | |||||||||| |
|
|
| T |
18656294 |
aagcataagagtactcatgagggagatactcaaagtaactcattgtagaaatgaatagattgataaaagatgatgaatgagtaca |
18656210 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 7040547 - 7040463
Alignment:
| Q |
9 |
aagcataagagtactcgtgtgggagatactcatagaaactcattatagaaatgaatagattaataaaagatgctaaatgagtaca |
93 |
Q |
| |
|
|||||||||||||||| || |||||||||||| || |||||||| |||||||||||||||| ||||||||| | |||||||||| |
|
|
| T |
7040547 |
aagcataagagtactcatgagggagatactcaaagtaactcattgtagaaatgaatagattgataaaagataatgaatgagtaca |
7040463 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 23564720 - 23564804
Alignment:
| Q |
9 |
aagcataagagtactcgtgtgggagatactcatagaaactcattatagaaatgaatagattaataaaagatgctaaatgagtaca |
93 |
Q |
| |
|
|||||||||||||||| || |||||||||||| || |||||||| |||||||||||||||| ||||||||| | |||||||||| |
|
|
| T |
23564720 |
aagcataagagtactcatgagggagatactcaaagtaactcattgtagaaatgaatagattgataaaagataatgaatgagtaca |
23564804 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 54296614 - 54296530
Alignment:
| Q |
9 |
aagcataagagtactcgtgtgggagatactcatagaaactcattatagaaatgaatagatt-aataaaagatgctaaatgagtaca |
93 |
Q |
| |
|
||||||||||||||| || ||||||||||||||||||||||||||| |||||||| |||| | |||||||| | |||||||||| |
|
|
| T |
54296614 |
aagcataagagtactgatgagggagatactcatagaaactcattata-aaatgaattgattgattaaaagatcatgaatgagtaca |
54296530 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 52520796 - 52520753
Alignment:
| Q |
1 |
aagagagaaagcataagagtactcgtgtgggagatactcataga |
44 |
Q |
| |
|
||||||| |||||||||||||||| ||||||||||||||||||| |
|
|
| T |
52520796 |
aagagagcaagcataagagtactcatgtgggagatactcataga |
52520753 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 52518954 - 52518911
Alignment:
| Q |
1 |
aagagagaaagcataagagtactcgtgtgggagatactcataga |
44 |
Q |
| |
|
||||||| ||||||||||| |||| ||||||||||||||||||| |
|
|
| T |
52518954 |
aagagagcaagcataagagaactcatgtgggagatactcataga |
52518911 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0311 (Bit Score: 71; Significance: 6e-32; HSPs: 4)
Name: scaffold0311
Description:
Target: scaffold0311; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 83 - 221
Target Start/End: Complemental strand, 13525 - 13387
Alignment:
| Q |
83 |
aaatgagtacatactaatccttatttataggacttaatggactaaccaattgtttaattaacttccaactccacaaactaacttataactaactattaag |
182 |
Q |
| |
|
|||||||||||||||| ||| ||||||||||||| | | |||||||||||||| ||| ||||||| |||| ||| ||||||||| |||||||||||||| |
|
|
| T |
13525 |
aaatgagtacatactagtccatatttataggactaattagactaaccaattgtgtaactaacttcaaactacactaactaacttgtaactaactattaac |
13426 |
T |
 |
| Q |
183 |
taatcctaattaaccaactgaatcctaagaatcttaaca |
221 |
Q |
| |
|
||| || ||||||| ||| ||||||||||||||||||| |
|
|
| T |
13425 |
taacccaaattaacacactaaatcctaagaatcttaaca |
13387 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0311; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 128 - 221
Target Start/End: Complemental strand, 13158 - 13065
Alignment:
| Q |
128 |
ccaattgtttaattaacttccaactccacaaactaacttataactaactattaagtaatcctaattaaccaactgaatcctaagaatcttaaca |
221 |
Q |
| |
|
|||||||| ||| ||||||| |||| ||| ||||||||| |||||||||||||| ||| || ||||||| ||| ||||||||||||||||||| |
|
|
| T |
13158 |
ccaattgtgtaactaacttcaaactacactaactaacttgtaactaactattaactaacccaaattaacacactaaatcctaagaatcttaaca |
13065 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0311; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 128 - 221
Target Start/End: Complemental strand, 13319 - 13226
Alignment:
| Q |
128 |
ccaattgtttaattaacttccaactccacaaactaacttataactaactattaagtaatcctaattaaccaactgaatcctaagaatcttaaca |
221 |
Q |
| |
|
|||||||| ||| ||||||| |||| ||| ||||||||| |||||||||||||| ||| || ||||||| ||| ||||||||||||||||||| |
|
|
| T |
13319 |
ccaattgtgtaactaacttcaaactacactaactaacttgtaactaactattaactaacccaaattaacacactaaatcctaagaatcttaaca |
13226 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0311; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 15083 - 15017
Alignment:
| Q |
149 |
aactccacaaactaacttataactaactattaagtaatcctaattaaccaactgaatcctaagaatc |
215 |
Q |
| |
|
|||| ||| ||||||||| |||||||||||||| ||| |||||||||| ||| ||||||||||||| |
|
|
| T |
15083 |
aactacactaactaacttgtaactaactattaactaaccctaattaacacactaaatcctaagaatc |
15017 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 63; Significance: 3e-27; HSPs: 9)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 83 - 221
Target Start/End: Original strand, 31822306 - 31822444
Alignment:
| Q |
83 |
aaatgagtacatactaatccttatttataggacttaatggactaaccaattgtttaattaacttccaactccacaaactaacttataactaactattaag |
182 |
Q |
| |
|
||||||||||||||| ||| ||||||||||||| | |||||||||||||| ||| ||||||| |||||||| ||||||||| |||| ||||||||| |
|
|
| T |
31822306 |
aaatgagtacatacttgtccatatttataggactaatcagactaaccaattgtgtaactaacttcaaactccactaactaacttgtaaccaactattaac |
31822405 |
T |
 |
| Q |
183 |
taatcctaattaaccaactgaatcctaagaatcttaaca |
221 |
Q |
| |
|
||| |||||||||| ||| |||||||| |||||||||| |
|
|
| T |
31822406 |
taaccctaattaacacactaaatcctaataatcttaaca |
31822444 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 28014318 - 28014402
Alignment:
| Q |
9 |
aagcataagagtactcgtgtgggagatactcatagaaactcattatagaaatgaatagattaataaaagatgctaaatgagtaca |
93 |
Q |
| |
|
|||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||| |
|
|
| T |
28014318 |
aagcataagagtgctcatgtgggagatactcatagaaactcattgtagaaatgaatagattgataaaagatgaataatgagtaca |
28014402 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 83 - 174
Target Start/End: Complemental strand, 7165677 - 7165586
Alignment:
| Q |
83 |
aaatgagtacatactaatccttatttataggacttaatggactaaccaattgtttaattaacttccaactccacaaactaacttataactaa |
174 |
Q |
| |
|
|||||||||||||||| ||| ||||||||||||||| |||||||||||||||| ||| ||||||| |||||||| |||||||| ||||||| |
|
|
| T |
7165677 |
aaatgagtacatactagtccatatttataggacttattggactaaccaattgtgtaactaacttcaaactccactaactaactattaactaa |
7165586 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 20046540 - 20046607
Alignment:
| Q |
9 |
aagcataagagtactcgtgtgggagatactcatagaaactcattatagaaatgaatagattaataaaa |
76 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||| |
|
|
| T |
20046540 |
aagcataagagtactcatgtgggagatactcatagaaactcattgtagaaatgaatagattgataaaa |
20046607 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 44963349 - 44963265
Alignment:
| Q |
9 |
aagcataagagtactcgtgtgggagatactcatagaaactcattatagaaatgaatagattaataaaagatgctaaatgagtaca |
93 |
Q |
| |
|
||||||||||||| || || |||||||||||| ||||| ||||| |||||||||||||||| |||||||||| | |||||||||| |
|
|
| T |
44963349 |
aagcataagagtattcatgagggagatactcaaagaaattcattgtagaaatgaatagattgataaaagatgatgaatgagtaca |
44963265 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 25471816 - 25471900
Alignment:
| Q |
9 |
aagcataagagtactcgtgtgggagatactcatagaaactcattatagaaatgaatagattaataaaagatgctaaatgagtaca |
93 |
Q |
| |
|
|||||||||| || || |||||||||||| |||||||||||||||| ||||||||||||| |||||||||| |||||||||| |
|
|
| T |
25471816 |
aagcataagattattcacgtgggagatactaatagaaactcattatataaatgaatagattgataaaagatgaataatgagtaca |
25471900 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 28124624 - 28124667
Alignment:
| Q |
1 |
aagagagaaagcataagagtactcgtgtgggagatactcataga |
44 |
Q |
| |
|
||||||| |||||||||||||||| ||||||||||||||||||| |
|
|
| T |
28124624 |
aagagagcaagcataagagtactcatgtgggagatactcataga |
28124667 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 28126451 - 28126494
Alignment:
| Q |
1 |
aagagagaaagcataagagtactcgtgtgggagatactcataga |
44 |
Q |
| |
|
||||||| |||||||||||||||| ||||||||||||||||||| |
|
|
| T |
28126451 |
aagagagcaagcataagagtactcatgtgggagatactcataga |
28126494 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 8405693 - 8405628
Alignment:
| Q |
9 |
aagcataagagtactcgtgtgggagatactcatagaaactcattatagaaatgaatagattaataa |
74 |
Q |
| |
|
||||||||||||| || || |||||||| || |||||||||||| ||||||||| |||||| |||| |
|
|
| T |
8405693 |
aagcataagagtattcatgggggagataatcgtagaaactcattgtagaaatgactagattgataa |
8405628 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0057 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0057
Description:
Target: scaffold0057; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 58971 - 58888
Alignment:
| Q |
9 |
aagcataagagtactcgtgtgggagatactcatagaaactcattatagaaatgaatagattaataaaagatgctaaatgagtaca |
93 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||||| | |||||||||| |
|
|
| T |
58971 |
aagcataagagtactcatgtgggagatactcatagaaactcattatag-aatgaatagattgataaaagatgatgaatgagtaca |
58888 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 61; Significance: 5e-26; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 17402827 - 17402911
Alignment:
| Q |
9 |
aagcataagagtactcgtgtgggagatactcatagaaactcattatagaaatgaatagattaataaaagatgctaaatgagtaca |
93 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||| | |||||||||| |
|
|
| T |
17402827 |
aagcataagagtactcatgtgggagatactcatagaaactcattgtagaaatgaatagattgataaaagatattgaatgagtaca |
17402911 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 1140187 - 1140103
Alignment:
| Q |
9 |
aagcataagagtactcgtgtgggagatactcatagaaactcattatagaaatgaatagattaataaaagatgctaaatgagtaca |
93 |
Q |
| |
|
|||||||||||||||| || |||||||||||| || |||||||| |||||||||||||||| |||||||||| | |||||||||| |
|
|
| T |
1140187 |
aagcataagagtactcatgagggagatactcaaagtaactcattgtagaaatgaatagattgataaaagatgatgaatgagtaca |
1140103 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 6789805 - 6789722
Alignment:
| Q |
9 |
aagcataagagtactcgtgtgggagatactcatagaaactcattatagaaatgaatagattaataaaagatgctaaatgagtaca |
93 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||| | ||||||| | |||||||||| |
|
|
| T |
6789805 |
aagcataagagtactcatgtgggagatactcatagaaactcattgtag-aatgaatagattgaaaaaagatagtgaatgagtaca |
6789722 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 149 - 221
Target Start/End: Complemental strand, 36472359 - 36472287
Alignment:
| Q |
149 |
aactccacaaactaacttataactaactattaagtaatcctaattaaccaactgaatcctaagaatcttaaca |
221 |
Q |
| |
|
|||||||| ||||||||| |||||||||||||| ||| ||||||||| ||| ||||||||||||||||||| |
|
|
| T |
36472359 |
aactccactaactaacttgtaactaactattaactaactctaattaacacactaaatcctaagaatcttaaca |
36472287 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0006
Description:
Target: scaffold0006; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 39325 - 39259
Alignment:
| Q |
14 |
taagagtactcgtgtgggagatactcatagaaactcattatagaaatgaatagattaataaaagatg |
80 |
Q |
| |
|
||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |
|
|
| T |
39325 |
taagagtactcatgtgggagatactcataaaaactcattatagaaatgaatagattgataaaagatg |
39259 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 55; Significance: 2e-22; HSPs: 11)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 31032049 - 31032118
Alignment:
| Q |
9 |
aagcataagagtactcgtgtgggagatactcatagaaactcattatagaaatgaatagattaataaaagat |
79 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |
|
|
| T |
31032049 |
aagcataagagtactcatgtgggagatactcatagaaactcattatag-aatgaatagattgataaaagat |
31032118 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 5567612 - 5567528
Alignment:
| Q |
9 |
aagcataagagtactcgtgtgggagatactcatagaaactcattatagaaatgaatagattaataaaagatgctaaatgagtaca |
93 |
Q |
| |
|
|||||||||||||||| || |||||||||||| || |||||||| |||||||||||||||| |||||||||| | |||||||||| |
|
|
| T |
5567612 |
aagcataagagtactcatgagggagatactcaaagtaactcattgtagaaatgaatagattgataaaagatgatgaatgagtaca |
5567528 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 3379164 - 3379243
Alignment:
| Q |
13 |
ataagagtactcgtgtgggagatactcatagaaactcattatagaaatgaatagattaataaaagatgctaaatgagtaca |
93 |
Q |
| |
|
|||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||| ||| | |||||||||| |
|
|
| T |
3379164 |
ataaaagtactcatgtgggagatactcatagaaactcattatag-aatgaatagattgataaaaaatgatgaatgagtaca |
3379243 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 30224416 - 30224332
Alignment:
| Q |
9 |
aagcataagagtactcgtgtgggagatactcatagaaactcattatagaaatgaatagattaataaaagatgctaaatgagtaca |
93 |
Q |
| |
|
|||||||||||||||| || |||||||||||| || |||||||| |||||||||||||||| ||||||||| | |||||||||| |
|
|
| T |
30224416 |
aagcataagagtactcatgagggagatactcaaagtaactcattgtagaaatgaatagattgataaaagataatgaatgagtaca |
30224332 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 19473713 - 19473649
Alignment:
| Q |
13 |
ataagagtactcgtgtgggagatactcatagaaactcattatagaaatgaatagattaataaaaga |
78 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||| |||| |
|
|
| T |
19473713 |
ataagagtactcatgtgggagatactcatagaaactcattatag-aatgaatagattgatagaaga |
19473649 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 19544638 - 19544574
Alignment:
| Q |
13 |
ataagagtactcgtgtgggagatactcatagaaactcattatagaaatgaatagattaataaaaga |
78 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||| |||| |
|
|
| T |
19544638 |
ataagagtactcatgtgggagatactcatagaaactcattatag-aatgaatagattgatagaaga |
19544574 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 19588058 - 19588122
Alignment:
| Q |
13 |
ataagagtactcgtgtgggagatactcatagaaactcattatagaaatgaatagattaataaaaga |
78 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||| |||| |
|
|
| T |
19588058 |
ataagagtactcatgtgggagatactcatagaaactcattatag-aatgaatagattgatagaaga |
19588122 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 25249192 - 25249108
Alignment:
| Q |
9 |
aagcataagagtactcgtgtgggagatactcatagaaactcattatagaaatgaatagattaataaaagatgctaaatgagtaca |
93 |
Q |
| |
|
||||||||| |||||| || |||||||||||| || |||||||| |||||||||||||||| ||||||||| | |||||||||| |
|
|
| T |
25249192 |
aagcataagggtactcatgagggagatactcaaagtaactcattgtagaaatgaatagattgataaaagatcatgaatgagtaca |
25249108 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 14939700 - 14939630
Alignment:
| Q |
9 |
aagcataagagtactcgtgtgggagatactcatagaaactcattatagaaatgaatagattaataaaagatg |
80 |
Q |
| |
|
||||||| |||||||| ||| | |||||||| |||||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
14939700 |
aagcatatgagtactcatgtagaagatactcgtagaaactcattatag-aatgaatagattgataaaagatg |
14939630 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 6428924 - 6428879
Alignment:
| Q |
12 |
cataagagtactcgtgtgggagatactcatagaaactcattataga |
57 |
Q |
| |
|
||||||||||||| |||| |||||||||| ||||||||||| |||| |
|
|
| T |
6428924 |
cataagagtactcatgtgagagatactcaaagaaactcattgtaga |
6428879 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 210
Target Start/End: Complemental strand, 26680937 - 26680849
Alignment:
| Q |
122 |
gactaaccaattgtttaattaacttccaactccacaaactaact-tataactaactattaagtaatcctaattaaccaactgaatcctaa |
210 |
Q |
| |
|
|||||||||||||| ||| |||||| |||| | | |||||| | | |||||||||| ||| ||||||||||||||||||| |||||||| |
|
|
| T |
26680937 |
gactaaccaattgtgtaaccaacttctaacttctctaactaattgtgtaactaactaataactaatcctaattaaccaact-aatcctaa |
26680849 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0189 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0189
Description:
Target: scaffold0189; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 19139 - 19063
Alignment:
| Q |
1 |
aagagagaaagcataagagtactcgtgtgggagatactcatagaaactcattatagaaatgaatagattaataaaaga |
78 |
Q |
| |
|
|||| |||||||||| |||||||| |||||||||| |||||||||||||||||||| |||||||||||| |||||||| |
|
|
| T |
19139 |
aagatagaaagcataggagtactcatgtgggagatgctcatagaaactcattatag-aatgaatagattgataaaaga |
19063 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 46; Significance: 5e-17; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 20012968 - 20013017
Alignment:
| Q |
9 |
aagcataagagtactcgtgtgggagatactcatagaaactcattatagaa |
58 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
20012968 |
aagcataagagtactcatgtgggagatactcatagaaactcattatagaa |
20013017 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 31 - 93
Target Start/End: Original strand, 25076182 - 25076244
Alignment:
| Q |
31 |
gagatactcatagaaactcattatagaaatgaatagattaataaaagatgctaaatgagtaca |
93 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||| ||| |||||||||| | || ||||||| |
|
|
| T |
25076182 |
gagatattcatagaaactcattatagaaatgaatatattgataaaagatgatgaaagagtaca |
25076244 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 31 - 93
Target Start/End: Original strand, 25134151 - 25134213
Alignment:
| Q |
31 |
gagatactcatagaaactcattatagaaatgaatagattaataaaagatgctaaatgagtaca |
93 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||| ||| |||||||||| | || ||||||| |
|
|
| T |
25134151 |
gagatattcatagaaactcattatagaaatgaatatattgataaaagatgatgaaagagtaca |
25134213 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 44; Significance: 7e-16; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 5924831 - 5924901
Alignment:
| Q |
9 |
aagcataagagtactcgtgtgggagatactcatagaaactcattatagaaatgaatagattaataaaagatg |
80 |
Q |
| |
|
||||||||||||| || | | ||||||||||||||||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
5924831 |
aagcataagagtattcatataggagatactcatagaaactcattatag-aatgaatagattgataaaagatg |
5924901 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 17449496 - 17449436
Alignment:
| Q |
9 |
aagcataagagtactcgtgtgggagatactcatagaaactcattatagaaatgaatagatt |
69 |
Q |
| |
|
||||| |||||||||| |||||||||||||||||||| |||||| |||| ||||||||||| |
|
|
| T |
17449496 |
aagcaaaagagtactcatgtgggagatactcatagaatctcattgtagacatgaatagatt |
17449436 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 48941798 - 48941702
Alignment:
| Q |
1 |
aagagagaaagcataagagtactcgtgtgggagatactcatagaaactcat--tatagaaatgaatagatt--aataaaagatgctaaatgagtaca |
93 |
Q |
| |
|
||||||| ||| ||||||||| || |||| |||||||||||| |||||||| |||||||||||||||||| | |||||||| || |||||||||| |
|
|
| T |
48941798 |
aagagagcaagtataagagtattcatgtgagagatactcatataaactcattatatagaaatgaatagatttgattaaaagatactgaatgagtaca |
48941702 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 16808615 - 16808658
Alignment:
| Q |
1 |
aagagagaaagcataagagtactcgtgtgggagatactcataga |
44 |
Q |
| |
|
||||||| |||||||||||||||| ||| ||||||||||||||| |
|
|
| T |
16808615 |
aagagagcaagcataagagtactcatgtcggagatactcataga |
16808658 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 112
Target Start/End: Original strand, 38999865 - 38999906
Alignment:
| Q |
71 |
ataaaagatgctaaatgagtacatactaatccttatttatag |
112 |
Q |
| |
|
|||||||||| ||||||||||||||||| | ||||||||||| |
|
|
| T |
38999865 |
ataaaagatgataaatgagtacatactagttcttatttatag |
38999906 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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