View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5717_high_83 (Length: 255)
Name: NF5717_high_83
Description: NF5717
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5717_high_83 |
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Alignment Details
Target: chr6 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 1431241 - 1431484
Alignment:
| Q |
1 |
ctgtcctaaattacagtatattgtggccaatacatgaagacacatcaccaattccaaacttggtttaccatcttcattacatatctcaaatgatttcaaa |
100 |
Q |
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| T |
1431241 |
ctgtcctaaattacagtatattgtggccaatacatgaagacacatcaccaattccaaacttggtttaccatcttcattacatatctcaaatgatttcaaa |
1431340 |
T |
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| Q |
101 |
gctctaagaccaaaattgagagccttgttcggattctcacccgaagatatcatatctctcgttatcttcaacaagaacggtccaagatcaggattatcta |
200 |
Q |
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| T |
1431341 |
gctctaagaccaaaattgagagccttgttcggattctcacccgaagatatcatatctctcgttatcttcaacaagaacggtccaagatcaggattatcta |
1431440 |
T |
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| Q |
201 |
actcgtcaacaataccgtccttcaaaccaagcctcctatgcttc |
244 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
1431441 |
actcgtcaacaataccgtccttcaaaccaagcctcttatgcttc |
1431484 |
T |
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