View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5717_low_107 (Length: 241)

Name: NF5717_low_107
Description: NF5717
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5717_low_107
NF5717_low_107
[»] chr7 (40 HSPs)
chr7 (1-233)||(5775029-5775261)
chr7 (9-124)||(35132778-35132892)
chr7 (30-124)||(34899756-34899850)
chr7 (45-124)||(22742801-22742879)
chr7 (30-91)||(8013647-8013708)
chr7 (144-232)||(41553470-41553559)
chr7 (144-232)||(41553815-41553904)
chr7 (144-232)||(41554160-41554249)
chr7 (30-122)||(30756970-30757062)
chr7 (9-203)||(1749217-1749405)
chr7 (30-124)||(19404904-19404997)
chr7 (147-232)||(24069430-24069516)
chr7 (30-120)||(37837612-37837701)
chr7 (160-232)||(969483-969556)
chr7 (144-232)||(3224446-3224535)
chr7 (31-121)||(9450289-9450379)
chr7 (59-203)||(48930657-48930794)
chr7 (31-124)||(13797081-13797173)
chr7 (30-87)||(19296726-19296782)
chr7 (144-232)||(27997057-27997146)
chr7 (30-123)||(48316962-48317055)
chr7 (41-124)||(5078544-5078625)
chr7 (144-208)||(28476189-28476253)
chr7 (41-124)||(39171740-39171824)
chr7 (45-124)||(24350993-24351071)
chr7 (45-123)||(35665282-35665360)
chr7 (144-201)||(24350909-24350966)
chr7 (30-122)||(25255086-25255176)
chr7 (144-219)||(30756869-30756941)
chr7 (30-87)||(42978456-42978513)
chr7 (76-120)||(3394365-3394409)
chr7 (144-210)||(8001605-8001668)
chr7 (144-210)||(12141367-12141430)
chr7 (144-188)||(19296839-19296883)
chr7 (147-228)||(26623830-26623909)
chr7 (144-188)||(34899685-34899729)
chr7 (41-124)||(40993040-40993124)
chr7 (144-188)||(42978579-42978623)
chr7 (45-124)||(47590176-47590253)
chr7 (19-124)||(48061259-48061365)
[»] chr2 (43 HSPs)
chr2 (9-208)||(10237282-10237477)
chr2 (6-124)||(32448772-32448888)
chr2 (30-124)||(1415421-1415514)
chr2 (30-124)||(4778609-4778703)
chr2 (19-116)||(18763313-18763409)
chr2 (144-232)||(29574665-29574754)
chr2 (30-116)||(7646328-7646415)
chr2 (19-124)||(43397270-43397373)
chr2 (19-123)||(30400188-30400293)
chr2 (45-124)||(37994145-37994223)
chr2 (45-124)||(38445037-38445116)
chr2 (30-124)||(12648074-12648167)
chr2 (144-219)||(19062403-19062475)
chr2 (43-124)||(31788325-31788406)
chr2 (147-219)||(12647971-12648043)
chr2 (12-124)||(41694453-41694563)
chr2 (45-124)||(3308810-3308888)
chr2 (41-124)||(4098970-4099053)
chr2 (45-124)||(9169407-9169486)
chr2 (9-124)||(14955358-14955472)
chr2 (9-124)||(29574783-29574897)
chr2 (144-219)||(37994253-37994328)
chr2 (30-124)||(11985380-11985473)
chr2 (30-124)||(19062502-19062595)
chr2 (41-110)||(27097569-27097637)
chr2 (144-230)||(10929638-10929726)
chr2 (144-232)||(32448656-32448744)
chr2 (144-188)||(38445143-38445187)
chr2 (176-219)||(22538343-22538386)
chr2 (144-191)||(27097482-27097529)
chr2 (144-183)||(29173803-29173842)
chr2 (146-219)||(37876657-37876727)
chr2 (30-124)||(4041744-4041837)
chr2 (146-212)||(6358931-6358997)
chr2 (30-124)||(7448104-7448197)
chr2 (144-208)||(7677935-7677996)
chr2 (30-80)||(7678071-7678121)
chr2 (45-115)||(19029066-19029135)
chr2 (30-124)||(36943273-36943367)
chr2 (144-228)||(34128725-34128810)
chr2 (144-219)||(36943172-36943244)
chr2 (44-123)||(1421542-1421624)
chr2 (30-74)||(35220184-35220228)
[»] chr4 (52 HSPs)
chr4 (144-232)||(51888247-51888336)
chr4 (30-122)||(9643244-9643338)
chr4 (9-124)||(51888366-51888480)
chr4 (13-123)||(36161563-36161670)
chr4 (144-219)||(22300833-22300908)
chr4 (148-219)||(37683878-37683949)
chr4 (30-124)||(2520643-2520737)
chr4 (30-124)||(4142904-4142997)
chr4 (19-124)||(24099219-24099325)
chr4 (30-124)||(32766380-32766474)
chr4 (30-124)||(43510065-43510159)
chr4 (30-124)||(53810894-53810988)
chr4 (144-232)||(9643372-9643461)
chr4 (45-203)||(27651829-27651983)
chr4 (9-203)||(36194558-36194748)
chr4 (144-232)||(52944295-52944384)
chr4 (31-91)||(21225358-21225417)
chr4 (45-124)||(18935668-18935745)
chr4 (41-124)||(35348183-35348265)
chr4 (9-124)||(47320551-47320665)
chr4 (147-232)||(28857389-28857475)
chr4 (53-122)||(9634563-9634632)
chr4 (144-219)||(26633721-26633793)
chr4 (30-124)||(5119204-5119299)
chr4 (44-124)||(9713788-9713867)
chr4 (44-124)||(21686390-21686470)
chr4 (9-124)||(22038950-22039062)
chr4 (144-232)||(12199729-12199815)
chr4 (144-191)||(19853587-19853634)
chr4 (45-124)||(19853661-19853740)
chr4 (9-124)||(22300690-22300804)
chr4 (45-124)||(22611064-22611143)
chr4 (44-124)||(56040793-56040874)
chr4 (41-119)||(9178234-9178312)
chr4 (31-81)||(21231628-21231678)
chr4 (163-213)||(43853445-43853495)
chr4 (30-124)||(45418392-45418486)
chr4 (147-213)||(52934000-52934066)
chr4 (45-119)||(52944193-52944266)
chr4 (19-124)||(7009123-7009226)
chr4 (163-232)||(9145918-9145992)
chr4 (19-119)||(9165196-9165297)
chr4 (30-124)||(22558613-22558708)
chr4 (60-124)||(33920949-33921011)
chr4 (144-219)||(33921038-33921110)
chr4 (144-181)||(35395758-35395795)
chr4 (64-124)||(1621647-1621707)
chr4 (144-188)||(4142833-4142877)
chr4 (144-188)||(22611170-22611214)
chr4 (144-212)||(33332628-33332696)
chr4 (144-188)||(35348294-35348338)
chr4 (30-74)||(48257648-48257692)
[»] chr1 (41 HSPs)
chr1 (4-117)||(34413247-34413360)
chr1 (17-124)||(45415395-45415502)
chr1 (9-124)||(49626738-49626852)
chr1 (30-124)||(31984029-31984123)
chr1 (30-124)||(1742130-1742223)
chr1 (19-124)||(18939160-18939263)
chr1 (31-124)||(7337812-7337905)
chr1 (5-115)||(34528543-34528650)
chr1 (144-232)||(47132870-47132959)
chr1 (32-124)||(15435022-15435113)
chr1 (34-124)||(8212059-8212149)
chr1 (31-116)||(45789415-45789498)
chr1 (41-124)||(23291792-23291874)
chr1 (30-124)||(940214-940307)
chr1 (30-91)||(7836949-7837009)
chr1 (163-232)||(24582937-24583006)
chr1 (148-232)||(41994398-41994483)
chr1 (31-124)||(5983686-5983780)
chr1 (144-232)||(19060877-19060965)
chr1 (76-124)||(24597472-24597520)
chr1 (144-232)||(44543240-44543328)
chr1 (147-206)||(32679158-32679217)
chr1 (50-124)||(36775866-36775938)
chr1 (146-232)||(43412343-43412430)
chr1 (44-121)||(568936-569011)
chr1 (146-188)||(10776539-10776581)
chr1 (30-80)||(10776653-10776703)
chr1 (19-124)||(14872477-14872583)
chr1 (30-124)||(34878421-34878514)
chr1 (46-124)||(48750055-48750131)
chr1 (144-232)||(9341694-9341783)
chr1 (144-201)||(16161801-16161858)
chr1 (144-219)||(35484441-35484513)
chr1 (163-232)||(49626900-49626969)
chr1 (144-210)||(1742251-1742314)
chr1 (144-188)||(8211988-8212032)
chr1 (43-87)||(11462635-11462678)
chr1 (148-200)||(12635141-12635193)
chr1 (9-120)||(31692618-31692727)
chr1 (144-212)||(39724949-39725017)
chr1 (76-124)||(44543165-44543213)
[»] chr3 (48 HSPs)
chr3 (30-124)||(40556557-40556651)
chr3 (30-122)||(47042203-47042295)
chr3 (9-120)||(29239164-29239273)
chr3 (30-121)||(33579714-33579804)
chr3 (144-232)||(12947310-12947399)
chr3 (144-232)||(53807894-53807982)
chr3 (45-123)||(7546471-7546550)
chr3 (9-124)||(8914529-8914644)
chr3 (30-124)||(20465119-20465210)
chr3 (9-124)||(21289970-21290083)
chr3 (41-124)||(29921910-29921992)
chr3 (41-124)||(29971063-29971145)
chr3 (9-124)||(50194433-50194547)
chr3 (10-124)||(629055-629169)
chr3 (30-124)||(10232916-10233010)
chr3 (147-228)||(29239309-29239391)
chr3 (30-124)||(36461580-36461674)
chr3 (30-124)||(47895997-47896091)
chr3 (34-124)||(51303789-51303877)
chr3 (144-219)||(40487291-40487364)
chr3 (41-124)||(6954845-6954928)
chr3 (30-124)||(9797678-9797773)
chr3 (45-120)||(22290798-22290873)
chr3 (45-124)||(52923266-52923344)
chr3 (146-212)||(25842641-25842707)
chr3 (30-124)||(54148834-54148928)
chr3 (144-232)||(35175367-35175456)
chr3 (144-219)||(36461481-36461553)
chr3 (163-212)||(41818194-41818243)
chr3 (144-219)||(43488640-43488712)
chr3 (44-124)||(9998327-9998407)
chr3 (44-124)||(43488739-43488819)
chr3 (144-203)||(7546573-7546632)
chr3 (45-124)||(53508082-53508160)
chr3 (46-124)||(10108098-10108176)
chr3 (144-210)||(25461060-25461126)
chr3 (30-124)||(45568593-45568687)
chr3 (144-219)||(9998433-9998505)
chr3 (144-219)||(10108202-10108274)
chr3 (144-219)||(10233036-10233108)
chr3 (160-201)||(42460725-42460766)
chr3 (30-87)||(48650921-48650978)
chr3 (144-212)||(3606739-3606807)
chr3 (45-124)||(29249105-29249182)
chr3 (45-117)||(37040632-37040704)
chr3 (144-188)||(40556678-40556722)
chr3 (144-210)||(45568504-45568567)
chr3 (76-124)||(52116160-52116208)
[»] chr8 (44 HSPs)
chr8 (144-229)||(8443548-8443634)
chr8 (9-116)||(18890861-18890967)
chr8 (30-116)||(37971140-37971226)
chr8 (144-232)||(1239431-1239519)
chr8 (144-232)||(8826178-8826266)
chr8 (9-124)||(15344133-15344247)
chr8 (9-124)||(15433198-15433312)
chr8 (9-124)||(15524502-15524616)
chr8 (30-124)||(20559893-20559985)
chr8 (30-124)||(20571455-20571547)
chr8 (30-122)||(1239553-1239644)
chr8 (9-124)||(8826035-8826151)
chr8 (48-124)||(14585565-14585641)
chr8 (162-228)||(29617312-29617379)
chr8 (30-121)||(31013721-31013812)
chr8 (144-219)||(34609799-34609874)
chr8 (30-123)||(14545050-14545144)
chr8 (30-124)||(28897559-28897653)
chr8 (144-219)||(3673410-3673482)
chr8 (44-124)||(5046613-5046691)
chr8 (144-228)||(5333395-5333480)
chr8 (144-232)||(24099289-24099378)
chr8 (144-219)||(28086861-28086933)
chr8 (144-232)||(1236731-1236819)
chr8 (19-115)||(25191223-25191318)
chr8 (45-124)||(24099410-24099488)
chr8 (164-219)||(33342448-33342503)
chr8 (146-232)||(15344277-15344363)
chr8 (146-232)||(15433342-15433428)
chr8 (146-232)||(15524646-15524732)
chr8 (30-116)||(20553401-20553486)
chr8 (30-124)||(27110611-27110705)
chr8 (30-124)||(29937963-29938056)
chr8 (83-124)||(6831490-6831531)
chr8 (44-124)||(3240238-3240318)
chr8 (147-228)||(7677321-7677400)
chr8 (30-74)||(7677477-7677521)
chr8 (45-124)||(7883387-7883467)
chr8 (77-121)||(8443671-8443715)
chr8 (144-188)||(20553317-20553361)
chr8 (193-232)||(21237805-21237845)
chr8 (17-124)||(37663221-37663329)
chr8 (144-208)||(39657416-39657480)
chr8 (44-124)||(40211452-40211532)
[»] chr6 (31 HSPs)
chr6 (30-120)||(30894483-30894573)
chr6 (30-124)||(12170342-12170436)
chr6 (45-124)||(31296671-31296750)
chr6 (152-219)||(31296793-31296860)
chr6 (30-124)||(33053317-33053411)
chr6 (34-123)||(606055-606144)
chr6 (167-219)||(30140575-30140627)
chr6 (32-124)||(34018409-34018501)
chr6 (45-124)||(14801069-14801147)
chr6 (147-232)||(26588508-26588594)
chr6 (144-219)||(13546713-13546785)
chr6 (30-87)||(29320049-29320105)
chr6 (36-120)||(34222649-34222731)
chr6 (144-208)||(8102687-8102751)
chr6 (9-124)||(14801645-14801761)
chr6 (44-124)||(22571351-22571429)
chr6 (160-234)||(1933726-1933801)
chr6 (30-124)||(3913723-3913817)
chr6 (146-219)||(29319928-29319998)
chr6 (34-115)||(20220760-20220839)
chr6 (34-115)||(22114744-22114823)
chr6 (147-232)||(28981145-28981231)
chr6 (147-232)||(30493500-30493586)
chr6 (30-124)||(32191881-32191975)
chr6 (144-181)||(127638-127675)
chr6 (144-201)||(1523369-1523426)
chr6 (144-232)||(7976213-7976302)
chr6 (144-219)||(33053218-33053290)
chr6 (45-124)||(68150-68229)
chr6 (45-124)||(8102580-8102660)
chr6 (149-219)||(32327267-32327334)
[»] chr5 (33 HSPs)
chr5 (154-219)||(19120886-19120951)
chr5 (161-232)||(10332584-10332656)
chr5 (9-124)||(2979462-2979576)
chr5 (9-124)||(39567120-39567234)
chr5 (30-124)||(6012287-6012381)
chr5 (56-120)||(31314631-31314692)
chr5 (30-124)||(38597643-38597736)
chr5 (163-232)||(8088248-8088317)
chr5 (19-124)||(13007063-13007168)
chr5 (55-124)||(19103623-19103691)
chr5 (19-124)||(26878228-26878332)
chr5 (75-120)||(31364395-31364440)
chr5 (31-124)||(34945268-34945361)
chr5 (41-124)||(9113874-9113957)
chr5 (45-203)||(14211093-14211245)
chr5 (30-124)||(38007203-38007295)
chr5 (163-228)||(19349679-19349745)
chr5 (144-219)||(31391803-31391875)
chr5 (30-87)||(31391943-31392000)
chr5 (144-210)||(38597763-38597826)
chr5 (45-124)||(8096647-8096725)
chr5 (162-232)||(16758521-16758592)
chr5 (144-219)||(35921046-35921121)
chr5 (152-213)||(37986169-37986227)
chr5 (154-228)||(38110988-38111063)
chr5 (164-219)||(42886484-42886539)
chr5 (30-123)||(7036073-7036166)
chr5 (144-219)||(11073950-11074022)
chr5 (147-216)||(26510696-26510765)
chr5 (144-188)||(13007195-13007239)
chr5 (147-203)||(28540976-28541032)
chr5 (76-124)||(28541062-28541110)
chr5 (163-219)||(41749308-41749364)
[»] scaffold0888 (1 HSPs)
scaffold0888 (9-124)||(1824-1938)
[»] scaffold0445 (2 HSPs)
scaffold0445 (19-124)||(1179-1283)
scaffold0445 (147-219)||(1314-1383)
[»] scaffold0347 (1 HSPs)
scaffold0347 (144-232)||(5994-6083)
[»] scaffold0009 (1 HSPs)
scaffold0009 (6-124)||(58229-58346)
[»] scaffold0884 (1 HSPs)
scaffold0884 (30-87)||(2159-2215)
[»] scaffold0017 (2 HSPs)
scaffold0017 (17-124)||(32897-33004)
scaffold0017 (144-210)||(32806-32869)
[»] scaffold0603 (1 HSPs)
scaffold0603 (31-124)||(7564-7655)
[»] scaffold0039 (1 HSPs)
scaffold0039 (144-232)||(93070-93160)
[»] scaffold0026 (1 HSPs)
scaffold0026 (30-124)||(72013-72107)
[»] scaffold0127 (2 HSPs)
scaffold0127 (30-113)||(15338-15420)
scaffold0127 (144-219)||(15458-15531)
[»] scaffold0087 (1 HSPs)
scaffold0087 (30-74)||(25528-25572)


Alignment Details
Target: chr7 (Bit Score: 149; Significance: 8e-79; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 5775029 - 5775261
Alignment:
Q  1 ttcttttttctttcacttatcgagaagatgtggttttatatcattttttgat--ctagaatcacccctctccatctatttttcccc-tttcttttgatac 97  Q
    |||||||||||||||||||| ||||||||||| |||||| |||||||||  |  ||||||||||||||||||||||||||| |||| ||||||||||||     
T  5775029 ttcttttttctttcacttatagagaagatgtgattttatgtcatttttttttacctagaatcacccctctccatctattttcccccctttcttttgatat 5775128  T
Q  98 aaataagtgattttcacatatatcaagnnnnnnnnncatgatttcgtcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttga 197  Q
    ||||||||||||| |||||||||||||         ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5775129 aaataagtgatttccacatatatcaagtttttt---catgatttcgtcgtcgtctgagtgcggcgttgtgttgttcatcgtcttatgcggcattatttga 5775225  T
Q  198 tttcgcgtcttgttgcagtgttgtttggttcatatc 233  Q
    ||||||||||||||||||||||||||||||||||||    
T  5775226 tttcgcgtcttgttgcagtgttgtttggttcatatc 5775261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 124
Target Start/End: Original strand, 35132778 - 35132892
Alignment:
Q  9 tctttcacttatcgagaagatgtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgat 108  Q
    ||||||||| |||||| ||  ||| |||||  ||| ||||||| |||||||||||||||| ||||| ||||||||||||||||| ||  |||||||||||    
T  35132778 tctttcactcatcgaggaggggtgattttaggtcaatttttgacctagaatcacccctctacatct-tttttcccctttcttttaatctaaataagtgat 35132876  T
Q  109 tttcacatatatcaag 124  Q
    ||||||||| ||||||    
T  35132877 tttcacatacatcaag 35132892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 34899850 - 34899756
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||||  ||||||||||| |||||||||||||||| ||||| |||||||| |||||||  ||  ||||||||| ||||||||| |||||||    
T  34899850 gtggttttaggtcattttttgacctagaatcacccctctacatctttttttcccttttctttcaatctaaataagtggttttcacatctatcaag 34899756  T

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Target: chr7; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 45 - 124
Target Start/End: Original strand, 22742801 - 22742879
Alignment:
Q  45 tttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||| |||||||||||||||||| ||||| ||||||||||||||||  ||  |||||||||||||||||||| ||||||    
T  22742801 tttttaatctagaatcacccctctgcatct-tttttcccctttctttcaatctaaataagtgattttcacatacatcaag 22742879  T

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Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 8013708 - 8013647
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttt 91  Q
    ||||||||| |||||||||||| |||||||||||||||| ||||| |||||||| |||||||    
T  8013708 gtggttttagatcattttttgacctagaatcacccctctacatctttttttcccttttcttt 8013647  T

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Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 232
Target Start/End: Complemental strand, 41553559 - 41553470
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt-gtttggttcatat 232  Q
    |||||| ||||||||| ||||||||||||| ||||||| || | | ||||||||||||||||||||||   ||||| |||||||||||||    
T  41553559 tcgtcgcctgagtgcaacgttgtgttgttcgtcgtcttgtgtgacgttatttgatttcgcgtcttgttatggtgttcgtttggttcatat 41553470  T

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Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 232
Target Start/End: Complemental strand, 41553904 - 41553815
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt-gtttggttcatat 232  Q
    |||||| ||||||||| ||||||||||||| ||||||| || | | ||||||||||||||||||||||   ||||| |||||||||||||    
T  41553904 tcgtcgcctgagtgcaacgttgtgttgttcgtcgtcttgtgtgacgttatttgatttcgcgtcttgttatggtgttcgtttggttcatat 41553815  T

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Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 232
Target Start/End: Complemental strand, 41554249 - 41554160
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt-gtttggttcatat 232  Q
    |||||| ||||||||| ||||||||||||| ||||||| || | | ||||||||||||||||||||||   ||||| |||||||||||||    
T  41554249 tcgtcgcctgagtgcaacgttgtgttgttcgtcgtcttgtgtgacgttatttgatttcgcgtcttgttatggtgttcgtttggttcatat 41554160  T

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Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 30757062 - 30756970
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatca 122  Q
    |||||||||  | ||||||||| |||||||||||||||| ||||| |||| ||| |||||||  ||  ||||||||||||||||||| |||||    
T  30757062 gtggttttaggtaattttttgacctagaatcacccctctacatcttttttccccttttctttcaatctaaataagtgattttcacatctatca 30756970  T

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Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 203
Target Start/End: Complemental strand, 1749405 - 1749217
Alignment:
Q  9 tctttcacttatcgagaagatgtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgat 108  Q
    ||||||||| |||||| ||  ||| |||||  ||| ||||||| ||||||||||||  || ||||| ||||  ||||||||||  ||  |||||||||||    
T  1749405 tctttcactcatcgaggaggggtgattttaggtcaatttttgacctagaatcacccg-cttcatctttttt--ccctttctttcaatctaaataagtgat 1749309  T
Q  109 tttcacatatatcaagnnnnnnnnncatgatttcgtcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgc 203  Q
    ||||||||| ||||||         | ||||||||||||| |   |||||  ||||||||||||| ||||||| ||||||||| |||||||||||    
T  1749308 tttcacatacatcaagtttttctttcgtgatttcgtcgtctt---agtgcgacgttgtgttgttcgtcgtcttgtgcggcattgtttgatttcgc 1749217  T

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Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 19404997 - 19404904
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||||  ||||||||||| |||||||||||||||| ||||| ||||| || |||||||  ||  ||||||||| |||||||||| ||||||    
T  19404997 gtggttttaggtcattttttgacctagaatcacccctctacatct-ttttttccttttctttcaatctaaataagtggttttcacataaatcaag 19404904  T

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Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 24069516 - 24069430
Alignment:
Q  147 tcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt-gtttggttcatat 232  Q
    |||||||||||| |||||||||||||| | ||||| |||||| || |||||||| |||| ||||||| ||||| ||||| |||||||    
T  24069516 tcgtctgagtgcggcgttgtgttgttcgttgtcttgtgcggcgttttttgatttggcgtattgttgcggtgttcgtttgattcatat 24069430  T

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Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 37837701 - 37837612
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatat 120  Q
    |||||||||  ||||||||||| |||||||||||||||| ||||| |||||||| |||||||  ||  ||||||||| ||| |||||||||    
T  37837701 gtggttttaggtcattttttgacctagaatcacccctctacatct-tttttcccttttctttcaatctaaataagtggtttacacatatat 37837612  T

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Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 232
Target Start/End: Complemental strand, 969556 - 969483
Alignment:
Q  160 gcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtg-ttgtttggttcatat 232  Q
    |||||||||||||| ||||||| |||||| || |||||||| ||||||| |||| ||| |||||||||||||||    
T  969556 gcgttgtgttgttcgtcgtcttttgcggcgttgtttgattttgcgtcttattgcggtgtttgtttggttcatat 969483  T

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Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 232
Target Start/End: Complemental strand, 3224535 - 3224446
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt-gtttggttcatat 232  Q
    |||||||||||| || | |||||||||||| | ||||| |||| |||||||||||||| ||| |||||||  |||| |||||||||||||    
T  3224535 tcgtcgtctgagggctgtgttgtgttgttcgtagtcttgtgcgacattatttgatttcacgttttgttgcgatgttcgtttggttcatat 3224446  T

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Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 9450379 - 9450289
Alignment:
Q  31 tggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatc 121  Q
    ||||||||  ||||||||||| |||||||||||| ||| |||||  ||| ||| |||||||  ||  ||||||||||||||||||| ||||    
T  9450379 tggttttaggtcattttttgacctagaatcacccatctacatcttgtttccccttttctttcaatctaaataagtgattttcacatctatc 9450289  T

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Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 59 - 203
Target Start/End: Original strand, 48930657 - 48930794
Alignment:
Q  59 tcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaagnnnnnnnnncatgatttcgtcgtcgtctgagtgc 158  Q
    |||||||||| ||||| ||||||||||||||||  ||  |||||||||||||||||||| ||||||         |||||||   ||||||||| |||||    
T  48930657 tcacccctctacatct-tttttcccctttctttcaatctaaataagtgattttcacatacatcaag---ttttttcatgatt---tcgtcgtcttagtgc 48930749  T
Q  159 agcgttgtgttgttcatcgtcttatgcggcattatttgatttcgc 203  Q
      ||||||||| ||| ||||||| |||||| || |||||||||||    
T  48930750 gacgttgtgttattcgtcgtcttgtgcggcgttgtttgatttcgc 48930794  T

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Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 13797173 - 13797081
Alignment:
Q  31 tggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||||||  ||||||||| | |||||||||||||||| ||||| |||| ||| |||||||  ||  |||||||||||||| |||| |||||||    
T  13797173 tggttttaggtcattttttaacctagaatcacccctctacatct-ttttccccttttctttcaatttaaataagtgattttaacatctatcaag 13797081  T

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Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 19296726 - 19296782
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttccccttt 87  Q
    |||||||||  ||||||||||| |||||||||||||||| ||||| ||||||||||||    
T  19296726 gtggttttaggtcattttttgacctagaatcacccctctacatct-tttttccccttt 19296782  T

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Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 232
Target Start/End: Original strand, 27997057 - 27997146
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt-gtttggttcatat 232  Q
    ||||||||||||||| || ||||||||||| || |||| |||  |||| ||| |||| || ||||||||||||||| ||||| |||||||    
T  27997057 tcgtcgtctgagtgcggcattgtgttgttcgtcatcttgtgcaacattgttttattttgcatcttgttgcagtgttcgtttgattcatat 27997146  T

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Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 48317055 - 48316962
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaa 123  Q
    |||||||||  |||||||| || |||||||||||||||| ||||| |||  ||| |||||||  ||  ||||||||| ||||||||| ||||||    
T  48317055 gtggttttaggtcatttttggacctagaatcacccctctacatctttttcccccttttctttcaatttaaataagtggttttcacatctatcaa 48316962  T

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Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 124
Target Start/End: Complemental strand, 5078625 - 5078544
Alignment:
Q  41 tcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||||||||| |||||||||||||||| |||||  || || || || ||| |||  |||||||||||||| ||||||||||||    
T  5078625 tcattttttgacctagaatcacccctctgcatct--ttctctccattatttcgatctaaataagtgatttttacatatatcaag 5078544  T

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Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 208
Target Start/End: Original strand, 28476189 - 28476253
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtctt 208  Q
    ||||||||| |||||  ||||||||||||| ||||||| |||||| || ||||||||||| ||||    
T  28476189 tcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatctt 28476253  T

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Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 124
Target Start/End: Complemental strand, 39171824 - 39171740
Alignment:
Q  41 tcattttttgatctagaatcacccctctccatc-tatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||||||||| |||||||||||||||| |||| | |||||||  ||||||| |||  ||||||||| |||||| || |||||||    
T  39171824 tcattttttgacctagaatcacccctctacatcttttttttcctttttctttcgatctaaataagtggttttcatatctatcaag 39171740  T

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Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 124
Target Start/End: Complemental strand, 24351071 - 24350993
Alignment:
Q  45 tttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||||| |||||||||||||| | ||||  |||||||| |||||||  ||  |||||||||||||||||||| ||||||    
T  24351071 tttttgacctagaatcacccctgtgcatccttttttccc-tttctttcaatctaaataagtgattttcacatacatcaag 24350993  T

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Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 123
Target Start/End: Complemental strand, 35665360 - 35665282
Alignment:
Q  45 tttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaa 123  Q
    ||||||| |||||||||||||||| ||||| | ||| | |||||||| |||  |||||||||||||  | |||||||||    
T  35665360 tttttgacctagaatcacccctctgcatctttattttctctttctttcgatctaaataagtgatttcgaaatatatcaa 35665282  T

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Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 24350966 - 24350909
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttc 201  Q
    ||||||||| |||||  ||||||||||||| ||||||| |||||| || |||||||||    
T  24350966 tcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttc 24350909  T

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Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 25255086 - 25255176
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatca 122  Q
    |||||||||  ||||||||||| ||| |||||||||| | ||||  ||||||||||||||||  ||  ||||||||  |||||||| ||||||    
T  25255086 gtggttttaggtcattttttgacctataatcacccctttgcatc--tttttcccctttctttcaatttaaataagttgttttcacacatatca 25255176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 219
Target Start/End: Complemental strand, 30756941 - 30756869
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt 219  Q
    ||||||||| ||||| |||||||||||||| ||||||| ||||||    ||||||||||||| |||| || |||||    
T  30756941 tcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgttttgtcgcggtgtt 30756869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 42978456 - 42978513
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttccccttt 87  Q
    |||||||||  ||||||||||| ||||||||||| |||| ||||| ||| ||||||||    
T  42978456 gtggttttaggtcattttttgacctagaatcaccactctacatctttttctccccttt 42978513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 3394365 - 3394409
Alignment:
Q  76 tttttcccctttcttttgatacaaataagtgattttcacatatat 120  Q
    |||||||||||||||| |||  ||||||||||||||||| |||||    
T  3394365 tttttcccctttctttcgatctaaataagtgattttcacgtatat 3394409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 210
Target Start/End: Complemental strand, 8001668 - 8001605
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgt 210  Q
    ||||||||| ||||| ||||| |||||||| ||||||| |||||| ||   ||||||||||||||||    
T  8001668 tcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttgt 8001605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 210
Target Start/End: Complemental strand, 12141430 - 12141367
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgt 210  Q
    ||||||||| ||||| ||||| |||||||  ||||||| |||||||||   ||||||||||||||||    
T  12141430 tcgtcgtctaagtgcggcgttttgttgtttgtcgtcttgtgcggcatt---tgatttcgcgtcttgt 12141367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 19296839 - 19296883
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggc 188  Q
    ||||||||| ||||| |||||||||||||| ||||||| ||||||    
T  19296839 tcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggc 19296883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 26623909 - 26623830
Alignment:
Q  147 tcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtg-ttgtttggttc 228  Q
    |||||||||||| |||||||||||||| ||||||| | ||||    |||||||| || ||||||||| ||| |||||||||||    
T  26623909 tcgtctgagtgcggcgttgtgttgttcgtcgtcttgtacggc---gtttgattttgcatcttgttgcggtgtttgtttggttc 26623830  T

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Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 34899729 - 34899685
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggc 188  Q
    ||||||||| ||||| |||||||||||||| ||||||| ||||||    
T  34899729 tcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggc 34899685  T

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Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 124
Target Start/End: Original strand, 40993040 - 40993124
Alignment:
Q  41 tcattttttgatctagaatcacccctctccatctatttttcc-cctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||||||||| ||| |||||| ||||| ||||| ||||||| | |||||||  ||  ||||||||| ||||||||| |||||||    
T  40993040 tcattttttgacctaaaatcactcctctacatctttttttccacttttctttcaatctaaataagtggttttcacatctatcaag 40993124  T

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Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 42978579 - 42978623
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggc 188  Q
    ||||||||| ||||| |||||||||||||| ||||||| ||||||    
T  42978579 tcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggc 42978623  T

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Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 124
Target Start/End: Original strand, 47590176 - 47590253
Alignment:
Q  45 tttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||||| |||||||||||||||| ||| |  |||||||  ||||||  ||  ||||||||| |||||||||||||||||    
T  47590176 tttttgaactagaatcacccctctacattt--ttttccctattctttcaatctaaataagtggttttcacatatatcaag 47590253  T

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Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 48061259 - 48061365
Alignment:
Q  19 atcgagaagatgtggttttatatcattttttgatctagaatcacccctctccatctatttttcccc--tttcttttgatacaaataagtgattttcacat 116  Q
    |||||| ||| |||||||||  |||||||||||  |||||||||||| || ||| | |||||||||  |||||||  ||  ||||||||| |||||||||    
T  48061259 atcgaggagaggtggttttaggtcattttttgacttagaatcaccccactacatat-tttttcccctttttctttcaatctaaataagtggttttcacat 48061357  T
Q  117 atatcaag 124  Q
     |||||||    
T  48061358 ctatcaag 48061365  T

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Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 208
Target Start/End: Complemental strand, 10237477 - 10237282
Alignment:
Q  9 tctttcacttatcgagaagatgtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgat 108  Q
    ||||||||| |||||| ||| ||| |||||  ||| ||||||| |||||||||||||||| ||||| ||||||||||||||||  ||  |||||||||||    
T  10237477 tctttcactcatcgagtagaggtgattttaggtcaatttttgacctagaatcacccctctacatct-tttttcccctttctttcaatctaaataagtgat 10237379  T
Q  109 tttcacatatatcaagnnnnnnnnncatgatttcgtcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtctt 208  Q
    ||||||||| ||||||         | |||||   ||||||||| |||||  ||||||||||||| ||||||| ||| || || ||||||||||| ||||    
T  10237378 tttcacatacatcaagtttttctttcgtgatt---tcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcagcgttctttgatttcgcatctt 10237282  T

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Target: chr2; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 6 - 124
Target Start/End: Complemental strand, 32448888 - 32448772
Alignment:
Q  6 ttttctttcacttatcgagaagatgtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagt 105  Q
    |||||||||||| |||||| ||  |||||||||  ||||| ||||| ||| |||||||||||| |||||  ||||||||||||||| |||  ||||||||    
T  32448888 ttttctttcactcatcgaggaggggtggttttaggtcattatttgacctaaaatcacccctctgcatct--ttttcccctttctttcgatctaaataagt 32448791  T
Q  106 gattttcacatatatcaag 124  Q
    |||||||||  ||||||||    
T  32448790 gattttcaccaatatcaag 32448772  T

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Target: chr2; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 1415421 - 1415514
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||||  | |||||||||||||||||||||||||| ||||| |||||||| |||||||  ||  |||||||||||||||||| ||||||||    
T  1415421 gtggttttaggttattttttgatctagaatcacccctctacatct-tttttcccttttctttcaatttaaataagtgattttcacacatatcaag 1415514  T

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Target: chr2; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 4778609 - 4778703
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||||  ||||||||||| |||||||||||||||| ||||| |||||||| |||||||  ||  ||||||||| ||||||||| |||||||    
T  4778609 gtggttttaggtcattttttgacctagaatcacccctctacatctttttttcccttttctttcaatttaaataagtggttttcacatctatcaag 4778703  T

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Target: chr2; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 18763313 - 18763409
Alignment:
Q  19 atcgagaagatgtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacat 116  Q
    |||||| ||| |||||||||| ||||||||||| |||||||||||||||| ||||| |||||||| |||||||  ||  ||||||||| |||||||||    
T  18763313 atcgaggagaggtggttttatgtcattttttgacctagaatcacccctctacatct-tttttcccttttctttcaatctaaataagtggttttcacat 18763409  T

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Target: chr2; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 232
Target Start/End: Complemental strand, 29574754 - 29574665
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtg-ttgtttggttcatat 232  Q
    |||||||| |||||| |||||||||||||| ||||||| ||||||||| ||||||||| | | ||||||||||| ||||||| |||||||    
T  29574754 tcgtcgtccgagtgcggcgttgtgttgttcgtcgtcttgtgcggcattgtttgatttcacattttgttgcagtgtttgtttgattcatat 29574665  T

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Target: chr2; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 116
Target Start/End: Original strand, 7646328 - 7646415
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccc-tttcttttgatacaaataagtgattttcacat 116  Q
    |||||||||  ||||||||||| |||||||||||||||| ||||| ||||||||| ||||||| |||  ||||||||| |||||||||    
T  7646328 gtggttttaggtcattttttgacctagaatcacccctctacatctttttttccccttttctttcgatctaaataagtggttttcacat 7646415  T

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Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 124
Target Start/End: Complemental strand, 43397373 - 43397270
Alignment:
Q  19 atcgagaagatgtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatat 118  Q
    |||||||||  |||||||||  ||||||||||| ||||||||||| |||| ||||  |||||||| |||||||  ||  ||||||||| |||||||||||    
T  43397373 atcgagaaggggtggttttaggtcattttttgacctagaatcacctctctacatc--tttttcccttttctttcaatctaaataagtggttttcacatat 43397276  T
Q  119 atcaag 124  Q
    ||||||    
T  43397275 atcaag 43397270  T

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Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 30400293 - 30400188
Alignment:
Q  19 atcgagaagatgtggttttatatcattttttgatctagaatcac-ccctctccatctatttttcccctttcttttgatacaaataagtgattttcacata 117  Q
    |||||||||| ||||||||| |||||||||||| ||| |||||| || ||| ||||| ||||| |  |||||||| ||  ||||||||| ||||||||||    
T  30400293 atcgagaagaggtggttttagatcattttttgacctaaaatcactccatctacatcttttttttctttttcttttaatctaaataagtgtttttcacata 30400194  T
Q  118 tatcaa 123  Q
    ||||||    
T  30400193 tatcaa 30400188  T

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Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 45 - 124
Target Start/End: Original strand, 37994145 - 37994223
Alignment:
Q  45 tttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||||| |||||||||||||||| ||| | | |||||||||||||| |||  |||||||||||||||||||| ||||||    
T  37994145 tttttgacctagaatcacccctctgcattt-tgtttcccctttctttcgatttaaataagtgattttcacatagatcaag 37994223  T

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Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 45 - 124
Target Start/End: Original strand, 38445037 - 38445116
Alignment:
Q  45 tttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||||||||||||||||||| ||||| |||| ||  |||||||  ||| ||||||||| ||||||||| |||||||    
T  38445037 tttttgatctagaatcacccctctacatcttttttccctttttctttcaatataaataagtggttttcacatctatcaag 38445116  T

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Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 12648167 - 12648074
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||||  ||||||||||| |||||||||||||||  ||||| |||||| | |||||||  ||  ||||||||||||| |||||||||||||    
T  12648167 gtggttttaggtcattttttgacctagaatcacccctccacatct-tttttctcttttctttcaatctaaataagtgatttccacatatatcaag 12648074  T

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Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 219
Target Start/End: Complemental strand, 19062475 - 19062403
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt 219  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||   |||||||||| ||||||||  |||||||    
T  19062475 tcgtcgtctaagtgcagcgttgtgttgttcgtcgtcttgtgcggc---atttgatttcacgtcttgtcacagtgtt 19062403  T

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Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 124
Target Start/End: Original strand, 31788325 - 31788406
Alignment:
Q  43 attttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||||||| |||||||||||||||| ||||| |||| ||  |||||||  ||  ||||||||||||||||||| |||||||    
T  31788325 attttttgacctagaatcacccctctacatcttttttcccattttctttcaatctaaataagtgattttcacatctatcaag 31788406  T

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Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 219
Target Start/End: Complemental strand, 12648043 - 12647971
Alignment:
Q  147 tcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt 219  Q
    |||||| ||||| | |||||||||||| ||||||| |||||| || ||||||||| ||||||||||| |||||    
T  12648043 tcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttctcgtcttgttgcggtgtt 12647971  T

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Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 124
Target Start/End: Original strand, 41694453 - 41694563
Alignment:
Q  12 ttcacttatcgagaagatgtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgatttt 111  Q
    |||||| ||||||||||||| ||||||  |||||||||||| || ||||| |  ||| ||||| ||||||||||| ||||||||  |||||||| | |||    
T  41694453 ttcactcatcgagaagatgtagttttaggtcattttttgatttaaaatcatcattcttcatct-tttttccccttacttttgatctaaataagt-agttt 41694550  T
Q  112 cacatatatcaag 124  Q
    ||||| |||||||    
T  41694551 cacatttatcaag 41694563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 124
Target Start/End: Original strand, 3308810 - 3308888
Alignment:
Q  45 tttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||||| |||||||||||||| | ||||| |||||||||||| |||  ||  |||||||||||||||||||| ||||||    
T  3308810 tttttgacctagaatcacccctttgcatct-tttttcccctttatttcaatctaaataagtgattttcacatacatcaag 3308888  T

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Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 124
Target Start/End: Original strand, 4098970 - 4099053
Alignment:
Q  41 tcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||||||||| |||||||||||| ||| ||||| |||| ||| |||||||  ||  ||||||||| ||||||||| |||||||    
T  4098970 tcattttttgacctagaatcacccatctacatcttttttccccttttctttcaatctaaataagtggttttcacatctatcaag 4099053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 124
Target Start/End: Complemental strand, 9169486 - 9169407
Alignment:
Q  45 tttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||||| |||||||||||||||| ||| | |||||||| |||||||  ||  ||||||||| ||||||||| |||||||    
T  9169486 tttttgacctagaatcacccctctacatttttttttcccttttctttcaatctaaataagtggttttcacatctatcaag 9169407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 124
Target Start/End: Original strand, 14955358 - 14955472
Alignment:
Q  9 tctttcacttatcgagaagatgtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgat 108  Q
    ||||||||| |||||| ||  ||| |||||  ||| ||||||| ||||||||| |||||| ||||| ||||||| ||||||||  ||  |||||||||||    
T  14955358 tctttcactcatcgaggaggggtgattttaagtcaatttttgacctagaatcatccctctgcatct-tttttcctctttctttcaatctaaataagtgat 14955456  T
Q  109 tttcacatatatcaag 124  Q
    || |||||| ||||||    
T  14955457 ttccacatacatcaag 14955472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 124
Target Start/End: Complemental strand, 29574897 - 29574783
Alignment:
Q  9 tctttcacttatcgagaagatgtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgat 108  Q
    |||||||||  ||||| ||  ||||||||| |||||||||||| ||||||||| |||| | ||||  |||||||  |||||||  ||  |||||||||||    
T  29574897 tctttcactcgtcgaggaggggtggttttagatcattttttgacctagaatca-ccctgtgcatccttttttccattttctttcaatctaaataagtgat 29574799  T
Q  109 tttcacatatatcaag 124  Q
    || |||||||||||||    
T  29574798 ttccacatatatcaag 29574783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 219
Target Start/End: Original strand, 37994253 - 37994328
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt 219  Q
    |||| |||||||||| |||||||||||||| || || | | ||||||| |||||||| || |||||||||||||||    
T  37994253 tcgttgtctgagtgcggcgttgtgttgttcgtcttcctgtacggcattgtttgattttgcatcttgttgcagtgtt 37994328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 11985473 - 11985380
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||||  ||||||||| | |||||||||||||||| || || |||| ||| |||||||  ||  ||||||||| |||||||||||||||||    
T  11985473 gtggttttaagtcattttttaacctagaatcacccctctacaact-ttttccccttttctttcaatttaaataagtggttttcacatatatcaag 11985380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 19062595 - 19062502
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||||  | ||||||||| |||||||||||||||| ||||  |||||||| |||||||  ||  ||||||||| ||||||||| |||||||    
T  19062595 gtggttttaggttattttttgaactagaatcacccctctacatc-ctttttcccttttctttcaatctaaataagtggttttcacatctatcaag 19062502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 110
Target Start/End: Complemental strand, 27097637 - 27097569
Alignment:
Q  41 tcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattt 110  Q
    ||||||||||| |||||||||||| ||| ||||| |||| ||| |||||||||||  |||||||||||||    
T  27097637 tcattttttgacctagaatcaccc-tctacatcttttttccccttttcttttgatctaaataagtgattt 27097569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 230
Target Start/End: Original strand, 10929638 - 10929726
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcatt-atttgatttcgcgtcttgttgcagtgtt-gtttggttcat 230  Q
    ||||||||||||||| | |||||||||||| ||||||| | || | ||  |||||||| |||||||||||| ||||| |||||||||||    
T  10929638 tcgtcgtctgagtgcggtgttgtgttgttcgtcgtcttgtacgacgttgttttgatttagcgtcttgttgcggtgttcgtttggttcat 10929726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 232
Target Start/End: Complemental strand, 32448744 - 32448656
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgttgtttggttcatat 232  Q
    ||||||||| |||||  | ||||||||||| ||||||| |||| | || |||||||| || ||||||||| |||||  |||||||||||    
T  32448744 tcgtcgtctaagtgcgaccttgtgttgttcgtcgtcttgtgcgccgttgtttgatttggcatcttgttgcggtgttcgttggttcatat 32448656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 38445143 - 38445187
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggc 188  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||    
T  38445143 tcgtcgtctaagtgcagcgttgtgttgttcgtcgtcttgtgcggc 38445187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 219
Target Start/End: Complemental strand, 22538386 - 22538343
Alignment:
Q  176 cgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt 219  Q
    |||||| |||||||||||||||||| | ||||||||||||||||    
T  22538386 cgtcttgtgcggcattatttgattttgagtcttgttgcagtgtt 22538343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 191
Target Start/End: Complemental strand, 27097529 - 27097482
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcatt 191  Q
    ||||||||| ||||| |||||||||||||| ||||||| |||||||||    
T  27097529 tcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcatt 27097482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 183
Target Start/End: Complemental strand, 29173842 - 29173803
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttat 183  Q
    ||||||||| ||||| ||||||||||||||||||||||||    
T  29173842 tcgtcgtctaagtgcggcgttgtgttgttcatcgtcttat 29173803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 37876727 - 37876657
Alignment:
Q  146 gtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt 219  Q
    ||||||| ||||| ||||| |||||||| ||||||| |||||||||   |||||||||||||||| || |||||    
T  37876727 gtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcatt---tgatttcgcgtcttgtcgcggtgtt 37876657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 4041837 - 4041744
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||||||  |||||  ||||| |||||||||||||||| ||| | |||||||| |||||||  ||  ||||||||| ||||||||| |||||||    
T  4041837 gtggttttggatcatactttgacctagaatcacccctctacat-tttttttcccgtttctttcaatctaaataagtggttttcacatctatcaag 4041744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 212
Target Start/End: Complemental strand, 6358997 - 6358931
Alignment:
Q  146 gtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttg 212  Q
    ||||||||||||   ||||||||||||| ||||||| ||| || || ||||||||||| ||||||||    
T  6358997 gtcgtctgagtgtgtcgttgtgttgttcgtcgtcttgtgcagcgttgtttgatttcgcatcttgttg 6358931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 7448104 - 7448197
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||||  ||||||||||  |||||||||||||||| ||||| |||| ||| |||||||  ||  |||||| || ||||||||| |||||||    
T  7448104 gtggttttaggtcattttttgtcctagaatcacccctctacatct-ttttccccttttctttcaatctaaataaatggttttcacatctatcaag 7448197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 208
Target Start/End: Complemental strand, 7677996 - 7677935
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtctt 208  Q
    ||||||||| ||||| |||||||||||||| ||||||| ||||||    ||||||||||||||||    
T  7677996 tcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgtctt 7677935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 80
Target Start/End: Complemental strand, 7678121 - 7678071
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctattttt 80  Q
    |||||||||  ||||||||||| |||||||||||||||| ||||| |||||    
T  7678121 gtggttttaggtcattttttgacctagaatcacccctctacatcttttttt 7678071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 115
Target Start/End: Complemental strand, 19029135 - 19029066
Alignment:
Q  45 tttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcaca 115  Q
    ||||||| |||||||||||| ||||||||| |||| ||||||  ||| |||  ||||||||||||||||||    
T  19029135 tttttgacctagaatcacccatctccatct-ttttaccccttcttttcgatctaaataagtgattttcaca 19029066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 36943367 - 36943273
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||||  ||||||||||| ||||||||||| |||| ||||| |||| | | |||||||  ||  ||||||||  ||||||||| |||||||    
T  36943367 gtggttttaggtcattttttgacctagaatcaccactctacatcttttttcctcttttctttcaatctaaataagtagttttcacatctatcaag 36943273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 228
Target Start/End: Complemental strand, 34128810 - 34128725
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtg-ttgtttggttc 228  Q
    ||||||||||||||| | ||| |||||||| ||||||| |||| | || |||||||  |||||||||||  ||| |||||||||||    
T  34128810 tcgtcgtctgagtgcggtgttatgttgttcgtcgtcttgtgcgacgttgtttgattgtgcgtcttgttgtggtgtttgtttggttc 34128725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 219
Target Start/End: Complemental strand, 36943244 - 36943172
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt 219  Q
    ||||||||| ||||| |||||||||||||| ||||||| ||||||    ||||||||||||| |||| || |||||    
T  36943244 tcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgtattgtcgcggtgtt 36943172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 123
Target Start/End: Original strand, 1421542 - 1421624
Alignment:
Q  44 ttttttgatctagaatcacccctctccatctattttt---cccctttcttttgatacaaataagtgattttcacatatatcaa 123  Q
    ||||||||| ||||||||||||||| ||||| |||||   ||| |||||||  ||  ||||||||| ||||||||| ||||||    
T  1421542 ttttttgatatagaatcacccctctacatcttttttttcccccttttctttcaatctaaataagtggttttcacatctatcaa 1421624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 35220184 - 35220228
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatct 74  Q
    |||||||||  | ||||||||| ||||||||||||||||||||||    
T  35220184 gtggttttaggttattttttgacctagaatcacccctctccatct 35220228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 4e-22; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 144 - 232
Target Start/End: Complemental strand, 51888336 - 51888247
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt-gtttggttcatat 232  Q
    |||| |||||||||| ||||||||||||||||||||||||||| | || ||||||||||| ||||||||| ||||| |||||||||||||    
T  51888336 tcgttgtctgagtgcggcgttgtgttgttcatcgtcttatgcgacgttgtttgatttcgcatcttgttgcggtgttcgtttggttcatat 51888247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 9643244 - 9643338
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctattttt--cccctttcttttgatacaaataagtgattttcacatatatca 122  Q
    |||||||||| ||||||||||| |||||||||| | ||| ||||| |||||  ||| ||||||| |||  |||||||||||||||||||||||||    
T  9643244 gtggttttatgtcattttttgacctagaatcactcatctgcatctttttttttcccatttctttcgatctaaataagtgattttcacatatatca 9643338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 124
Target Start/End: Complemental strand, 51888480 - 51888366
Alignment:
Q  9 tctttcacttatcgagaagatgtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgat 108  Q
    ||||||||| |||||| ||  |||||||||  |||||||||||  | |||||||||||||| |||| ||| |||||||||||  |||  ||| |||||||    
T  51888480 tctttcactcatcgaggaggggtggttttaggtcattttttgacattgaatcacccctctcaatct-tttatcccctttcttccgatctaaacaagtgat 51888382  T
Q  109 tttcacatatatcaag 124  Q
    ||||||||||||||||    
T  51888381 tttcacatatatcaag 51888366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 123
Target Start/End: Original strand, 36161563 - 36161670
Alignment:
Q  13 tcacttatcgagaagatgtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttc 112  Q
    ||||| |||||| ||| |||||||||  ||||||||||| |||||||||||| ||| |||   |||||||| |||||||  ||  ||||||||||||||     
T  36161563 tcactcatcgaggagaggtggttttaggtcattttttgacctagaatcacccatctgcat---tttttcccatttctttcaatctaaataagtgattttt 36161659  T
Q  113 acatatatcaa 123  Q
    |||||||||||    
T  36161660 acatatatcaa 36161670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 144 - 219
Target Start/End: Original strand, 22300833 - 22300908
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt 219  Q
    |||||||||| ||||  ||||||||||||| ||||||| |||||| || |||||||||||||| |||||| |||||    
T  22300833 tcgtcgtctgtgtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcgtcctgttgcggtgtt 22300908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 219
Target Start/End: Original strand, 37683878 - 37683949
Alignment:
Q  148 cgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt 219  Q
    ||||||||||| |||||||||||||||||||||| ||  |  || ||||||||||||||||||||| |||||    
T  37683878 cgtctgagtgcggcgttgtgttgttcatcgtcttgtgtagagttgtttgatttcgcgtcttgttgcggtgtt 37683949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 2520643 - 2520737
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||||  ||||||||||| |||||||||||||||| ||||| |||| ||| |||| ||  ||  ||||||||| ||||||||| |||||||    
T  2520643 gtggttttaggtcattttttgacctagaatcacccctctacatcttttttccccttttcgttcaatctaaataagtggttttcacatctatcaag 2520737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 4142997 - 4142904
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||||  ||||||||||| |||||||||||||||| ||||| |||| ||| |||||||  ||  ||||||||| ||||||||| |||||||    
T  4142997 gtggttttaggtcattttttgacctagaatcacccctctacatcttttttccccttttctttcaatctaaataagtg-ttttcacatctatcaag 4142904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 124
Target Start/End: Complemental strand, 24099325 - 24099219
Alignment:
Q  19 atcgagaagatgtggttttatatcatttttt-gatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacata 117  Q
    |||||| ||| |||||||||  ||||||||| || ||||||||| |||||| ||||| |||| ||| |||||||  ||  |||||||||||||||||||     
T  24099325 atcgaggagaggtggttttaggtcatttttttgacctagaatcatccctctacatcttttttccccttttctttcaatctaaataagtgattttcacatc 24099226  T
Q  118 tatcaag 124  Q
    |||||||    
T  24099225 tatcaag 24099219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 32766380 - 32766474
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||||  ||||||||||| |||||||||||||||| ||||| |||| ||| |||||||  ||  || |||||| ||||||||| |||||||    
T  32766380 gtggttttaggtcattttttgacctagaatcacccctctacatcttttttccccttttctttcaatctaagtaagtgtttttcacatctatcaag 32766474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 43510065 - 43510159
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||||  ||||||||||| |||||||||| ||||| ||||| |||||||| |||||||  ||  |||||||||  |||||||| |||||||    
T  43510065 gtggttttaggtcattttttgacctagaatcactcctctacatctttttttcccttttctttcaatctaaataagtggctttcacatttatcaag 43510159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 53810894 - 53810988
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||||  ||||||||||| ||| |||||||||||| ||||| |||  ||| |||||||  ||  ||||||||||||||||||| |||||||    
T  53810894 gtggttttaggtcattttttgacctataatcacccctctacatctttttcccccttttctttcaatttaaataagtgattttcacatctatcaag 53810988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 232
Target Start/End: Original strand, 9643372 - 9643461
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt-gtttggttcatat 232  Q
    |||||||| ||||||  ||||||||||||| |||||||  ||| | || ||||||||| | ||||||||||||||| |||||||||||||    
T  9643372 tcgtcgtccgagtgcgacgttgtgttgttcgtcgtcttgagcgacgttgtttgatttctcatcttgttgcagtgttcgtttggttcatat 9643461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 203
Target Start/End: Original strand, 27651829 - 27651983
Alignment:
Q  45 tttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaagnnnnnnnnncatgatttcgt 144  Q
    ||||||| |||| ||||||| ||| ||||| |||||||| |||||||  ||  |||||||||||||||||||| ||||||         | |||||   |    
T  27651829 tttttgacctaggatcacccatctgcatct-tttttcccatttctttcaatctaaataagtgattttcacatacatcaagtttttctttcgtgatt---t 27651924  T
Q  145 cgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgc 203  Q
    |||||||| |||||| ||||||||||||| ||||||| |||||  || |||||||||||    
T  27651925 cgtcgtcttagtgcaacgttgtgttgttcgtcgtcttgtgcggtgttgtttgatttcgc 27651983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 203
Target Start/End: Original strand, 36194558 - 36194748
Alignment:
Q  9 tctttcacttatcgagaagatgtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgat 108  Q
    |||||||||||||||| |   ||| ||||| |||| ||||||| ||| || || |||||| ||||| |||||| |||||||||  ||  |||||||||||    
T  36194558 tctttcacttatcgaggatgggtgattttagatcaatttttgacctaaaaacatccctctgcatct-tttttctcctttctttcaatttaaataagtgat 36194656  T
Q  109 tttcacatatatcaagnnnnnnnnncatgatttcgtcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgc 203  Q
    ||||||||| ||||||         | |||||   |||| |||| |||||  ||||||||||||| ||||||| |||||| || |||||||||||    
T  36194657 tttcacatacatcaagtttttctttcgtgatt---tcgttgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgc 36194748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 232
Target Start/End: Original strand, 52944295 - 52944384
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt-gtttggttcatat 232  Q
    |||| |||||||||| |||||||||||||| |||| || |||||| || ||| |||| |||||||||||| ||||| ||||| |||||||    
T  52944295 tcgtagtctgagtgcggcgttgtgttgttcgtcgttttgtgcggcgttgtttaattttgcgtcttgttgcggtgttcgtttgtttcatat 52944384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 21225417 - 21225358
Alignment:
Q  31 tggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttt 91  Q
    ||||||||  ||||||||||||||| ||||||| |||||||||| ||||||||||||||||    
T  21225417 tggttttaggtcattttttgatctaaaatcacctctctccatct-tttttcccctttcttt 21225358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 124
Target Start/End: Original strand, 18935668 - 18935745
Alignment:
Q  45 tttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||||| |||||||||||| ||| ||||| ||||||||||||||||| ||  |||| ||||||||||||||| ||||||    
T  18935668 tttttgacctagaatcaccc-tctgcatct-tttttcccctttcttttaatctaaattagtgattttcacatacatcaag 18935745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 124
Target Start/End: Original strand, 35348183 - 35348265
Alignment:
Q  41 tcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||||||||| ||||||||||| |||| ||||| |||||||| |||||||  ||  ||||||||| |||||||| ||||||||    
T  35348183 tcattttttgacctagaatcacctctctacatct-tttttcccttttctttcaatctaaataagtggttttcacaaatatcaag 35348265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 124
Target Start/End: Complemental strand, 47320665 - 47320551
Alignment:
Q  9 tctttcacttatcgagaagatgtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgat 108  Q
    |||||| || |||||||||  |||||||||  ||||| |||||  || ||||||  |||| ||||| ||||||||||||| || |||  |||||||||||    
T  47320665 tctttcgctcatcgagaaggggtggttttaggtcattctttgacttaaaatcacaactctgcatct-tttttcccctttcgttcgatctaaataagtgat 47320567  T
Q  109 tttcacatatatcaag 124  Q
    ||||||| ||||||||    
T  47320566 tttcacaaatatcaag 47320551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 28857389 - 28857475
Alignment:
Q  147 tcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt-gtttggttcatat 232  Q
    |||||| ||||| |||||||||||||| | ||||| |||||| || ||||||| ||||||| ||||| ||||| ||||| |||||||    
T  28857389 tcgtctaagtgcggcgttgtgttgttcgttgtcttgtgcggcgttgtttgattccgcgtctagttgcggtgttcgtttgtttcatat 28857475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 122
Target Start/End: Original strand, 9634563 - 9634632
Alignment:
Q  53 ctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatca 122  Q
    ||||||||| || ||| ||||| |||||| | ||||||| |||  |||||||||||||||||||||||||    
T  9634563 ctagaatcatccatctgcatctttttttctcatttctttcgatctaaataagtgattttcacatatatca 9634632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 219
Target Start/End: Complemental strand, 26633793 - 26633721
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt 219  Q
    ||||||||| ||||| |||||||||||||| ||||||| ||||||   ||| || |||||||||||| ||||||||    
T  26633793 tcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggc---attggacttcgcgtcttgtcgcagtgtt 26633721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 5119204 - 5119299
Alignment:
Q  30 gtggttttatatcattttttg-atctagaatcacccctctccatctatttttcccct-ttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||||| |||||||||  | |||||||||||||||| ||||| |||| ||||| ||||||  ||  ||||||||| |||||||||||||||||    
T  5119204 gtggttttatgtcattttttttacctagaatcacccctctacatct-ttttccccctcttctttcaatctaaataagtggttttcacatatatcaag 5119299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 124
Target Start/End: Original strand, 9713788 - 9713867
Alignment:
Q  44 ttttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||| | ||||||||||  |||| ||||| ||||||||||||||||  ||  ||||||||||||| |||||||||||||    
T  9713788 tttttttacctagaatcacttctctacatct-tttttcccctttctttcaatctaaataagtgatttccacatatatcaag 9713867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 124
Target Start/End: Complemental strand, 21686470 - 21686390
Alignment:
Q  44 ttttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||| ||| |||||||||||| ||||| |||| ||| |||||||  ||  ||||||||| ||||||||| |||||||    
T  21686470 ttttttgacctaaaatcacccctctacatcttttttccccttttctttcaatctaaataagtggttttcacatctatcaag 21686390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 124
Target Start/End: Complemental strand, 22039062 - 22038950
Alignment:
Q  9 tctttcacttatcgagaagatgtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgat 108  Q
    ||||||||| |||||| ||  |||||||||  ||| |||| ||||||||||||||| | | ||||| ||||  ||||||||||  ||  |||||||||||    
T  22039062 tctttcactcatcgagcaggggtggttttaggtcaattttggatctagaatcaccctt-tgcatctttttt--ccctttctttctatctaaataagtgat 22038966  T
Q  109 tttcacatatatcaag 124  Q
    |||||||| |||||||    
T  22038965 tttcacatctatcaag 22038950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 232
Target Start/End: Complemental strand, 12199815 - 12199729
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt-gtttggttcatat 232  Q
    ||||||||||||||  ||||||||||||||||||| || ||| ||    |||||||| |||||||||||| ||||| |||| ||||||||    
T  12199815 tcgtcgtctgagtgtggcgttgtgttgttcatcgttttgtgcagc---ttttgattttgcgtcttgttgcggtgttcgtttagttcatat 12199729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 191
Target Start/End: Complemental strand, 19853634 - 19853587
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcatt 191  Q
    ||||||||| ||||| |||||||||||||| |||||||||| ||||||    
T  19853634 tcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttatgtggcatt 19853587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 124
Target Start/End: Complemental strand, 19853740 - 19853661
Alignment:
Q  45 tttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||||| |||||||||||||||| ||||| |||| ||| ||||||   ||  ||||||||| ||||||||| |||||||    
T  19853740 tttttgacctagaatcacccctctacatcttttttccccttttcttccaatctaaataagtggttttcacatctatcaag 19853661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 124
Target Start/End: Original strand, 22300690 - 22300804
Alignment:
Q  9 tctttcacttatcgagaagatgtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgat 108  Q
    |||||||||  ||||| ||  |||||||||  ||||||||||| ||| |||||||||| | ||||  |||||| | |||||||  ||  |||||||||||    
T  22300690 tctttcactcgtcgaggaggagtggttttaggtcattttttgacctaaaatcacccctttgcatcc-tttttctcttttctttcaatttaaataagtgat 22300788  T
Q  109 tttcacatatatcaag 124  Q
    |||||| |||||||||    
T  22300789 tttcacgtatatcaag 22300804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 124
Target Start/End: Original strand, 22611064 - 22611143
Alignment:
Q  45 tttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||||| |||||||||||| ||| ||||| |||| ||| |||||||  ||  ||||||||| ||||||||| |||||||    
T  22611064 tttttgacctagaatcacccatctacatcttttttccccttttctttcaatctaaataagtggttttcacatctatcaag 22611143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 124
Target Start/End: Complemental strand, 56040874 - 56040793
Alignment:
Q  44 ttttttgatctagaatcacccctctccatctatttttcccct--ttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||| |||||||||||||||| ||||| ||||||||||  ||||||  ||  ||||||||| ||||||||| |||||||    
T  56040874 ttttttgacctagaatcacccctctacatct-tttttccccttcttctttcaatctaaataagtggttttcacatctatcaag 56040793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 119
Target Start/End: Original strand, 9178234 - 9178312
Alignment:
Q  41 tcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatata 119  Q
    ||||||||||| |||||||||||| ||| ||||| ||| |||| |||||||  ||  |||||| || ||||||||||||    
T  9178234 tcattttttgacctagaatcacccttctacatctttttctcccttttctttcaatctaaataaatggttttcacatata 9178312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 21231678 - 21231628
Alignment:
Q  31 tggttttatatcattttttgatctagaatcacccctctccatctatttttc 81  Q
    ||||||||  ||||||||||||||| ||||||| |||||||||| ||||||    
T  21231678 tggttttaggtcattttttgatctaaaatcacctctctccatctttttttc 21231628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 213
Target Start/End: Original strand, 43853445 - 43853495
Alignment:
Q  163 ttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgc 213  Q
    |||||||||||||| |||| |||||| || ||||||||||||| |||||||    
T  43853445 ttgtgttgttcatcatcttgtgcggcgttgtttgatttcgcgtattgttgc 43853495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 45418392 - 45418486
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||||  ||||||||||| ||||||||| |||||| || || |||| | | ||||| |  ||| ||||||| | |||||||||||||||||    
T  45418392 gtggttttaggtcattttttgacctagaatcatccctctacacctcttttcctcttttctctcaatataaataagaggttttcacatatatcaag 45418486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 213
Target Start/End: Complemental strand, 52934066 - 52934000
Alignment:
Q  147 tcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgc 213  Q
    |||||||||||| |||||||||||||| || | || ||| || || ||||||||||| |||||||||    
T  52934066 tcgtctgagtgcggcgttgtgttgttcgtcattttgtgcagcgttgtttgatttcgcatcttgttgc 52934000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 119
Target Start/End: Original strand, 52944193 - 52944266
Alignment:
Q  45 tttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatata 119  Q
    ||||||||||| ||||| ||||||  ||| ||||||||| |||||||  ||  ||||||||||||||||||||||    
T  52944193 tttttgatctaaaatcatccctctgtatc-atttttcccttttctttcaatctaaataagtgattttcacatata 52944266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 124
Target Start/End: Complemental strand, 7009226 - 7009123
Alignment:
Q  19 atcgagaagatgtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatat 118  Q
    |||||||||||||||||||| ||||  |||||  ||||||||||| |||   |||| |||||||| ||||||| ||| | ||||| |||||| ||||||     
T  7009226 atcgagaagatgtggttttagatcaacttttggcctagaatcacctctccgaatct-tttttcccttttctttcgat-ctaataactgatttccacatac 7009129  T
Q  119 atcaag 124  Q
    ||||||    
T  7009128 atcaag 7009123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 232
Target Start/End: Complemental strand, 9145992 - 9145918
Alignment:
Q  163 ttgtgttgttcatcgtcttatgcggcattatttgatttcg----cgtcttgttgcagtg-ttgtttggttcatat 232  Q
    ||||||||||| ||||||| ||||||||| ||||||||||    | ||||||||| ||| |||||||||||||||    
T  9145992 ttgtgttgttcgtcgtcttgtgcggcattgtttgatttcgttttcatcttgttgcggtgtttgtttggttcatat 9145918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 9165297 - 9165196
Alignment:
Q  19 atcgagaagatgtggttttatatcat-tttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacata 117  Q
    |||||| ||| |||||||||  |||| ||||| | |||||||||||||||| ||||| ||| |||| | |||||  ||  ||||||||| ||||||||||    
T  9165297 atcgaggagaggtggttttaggtcatattttttacctagaatcacccctctacatctttttctcccttatctttcaatctaaataagtggttttcacata 9165198  T
Q  118 ta 119  Q
    ||    
T  9165197 ta 9165196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 22558708 - 22558613
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccc--tttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||||  |||||||||||  |||||||||| |||| ||||| |||||||||  |||||||  ||  ||||||||| ||||||||| |||||||    
T  22558708 gtggttttaggtcattttttgacatagaatcacctctctacatct-tttttcccctttttctttcaatctaaataagtggttttcacatctatcaag 22558613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 124
Target Start/End: Original strand, 33920949 - 33921011
Alignment:
Q  60 cacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||| ||| ||||| |||||||| |||||||  |||  ||||||||||||||||||||||||||    
T  33920949 cacccatctacatctttttttcccttttctttcaata--aataagtgattttcacatatatcaag 33921011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 219
Target Start/End: Original strand, 33921038 - 33921110
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt 219  Q
    ||||||||| ||||| ||||||||||||||  ||||||||||| |    ||||||||| |||||||| ||||||||    
T  33921038 tcgtcgtctaagtgcggcgttgtgttgttcgccgtcttatgcgac---gtttgatttcacgtcttgtcgcagtgtt 33921110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 35395795 - 35395758
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtctt 181  Q
    ||||||||||||||| |||||||||||||| |||||||    
T  35395795 tcgtcgtctgagtgcggcgttgtgttgttcgtcgtctt 35395758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 1621707 - 1621647
Alignment:
Q  64 cctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||| ||||| ||||||||||||| ||  ||  |||||||||||||||||||| ||||||    
T  1621707 cctctgcatctttttttcccctttcattcaatctaaataagtgattttcacatacatcaag 1621647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 4142877 - 4142833
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggc 188  Q
    ||||||||| ||||| |||||||||||||| ||||||| ||||||    
T  4142877 tcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggc 4142833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 22611170 - 22611214
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggc 188  Q
    ||||||||| ||||| |||||||||||||| ||||||| ||||||    
T  22611170 tcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggc 22611214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 212
Target Start/End: Complemental strand, 33332696 - 33332628
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttg 212  Q
    |||||||||| |||| |||||||||||||  ||| ||| |||| | || ||||||||||| ||||||||    
T  33332696 tcgtcgtctgtgtgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttg 33332628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 35348294 - 35348338
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggc 188  Q
    ||||||||| ||||| |||||||||||||| ||||||| ||||||    
T  35348294 tcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggc 35348338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 48257692 - 48257648
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatct 74  Q
    |||||||||| ||||||||||| |||||||||||| ||| |||||    
T  48257692 gtggttttatgtcattttttgacctagaatcacccatctacatct 48257648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 4e-22; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 34413360 - 34413247
Alignment:
Q  4 ttttttctttcacttatcgagaagatgtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataa 103  Q
    |||| |||||||||||||||| ||  ||| |||||  ||| ||||| |||||||||||||||||| ||||| ||||||||||||||||  ||  ||||||    
T  34413360 ttttctctttcacttatcgagtaggggtgattttaggtcaattttttatctagaatcacccctctgcatctttttttcccctttctttcaatctaaataa 34413261  T
Q  104 gtgattttcacata 117  Q
    ||||||||||||||    
T  34413260 gtgattttcacata 34413247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 124
Target Start/End: Original strand, 45415395 - 45415502
Alignment:
Q  17 ttatcgagaagatgtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacat 116  Q
    |||||||| ||  |||||||||  |||||||||||||||||||||||||||| ||||| |||| ||| |||||||  ||  ||||||||| |||||||||    
T  45415395 ttatcgaggaggggtggttttaggtcattttttgatctagaatcacccctctacatcttttttccccttttctttcaatttaaataagtggttttcacat 45415494  T
Q  117 atatcaag 124  Q
     |||||||    
T  45415495 ctatcaag 45415502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 124
Target Start/End: Original strand, 49626738 - 49626852
Alignment:
Q  9 tctttcacttatcgagaagatgtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgat 108  Q
    ||||||||| |||||| ||  |||||||||  ||||| ||||| ||| |||||||||||| ||||| ||||||||||||||||  ||  |||||||||||    
T  49626738 tctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaatcacccctctgcatct-tttttcccctttctttctatctaaataagtgat 49626836  T
Q  109 tttcacatatatcaag 124  Q
    ||||||| ||||||||    
T  49626837 tttcacaaatatcaag 49626852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 31984029 - 31984123
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||||  ||||||||||| |||||| |||| |||| ||||| |||||||| ||||||| |||  ||||||||| |||||||||||||||||    
T  31984029 gtggttttaggtcattttttgacctagaagcacctctctacatctttttttcccttttctttcgatctaaataagtggttttcacatatatcaag 31984123  T

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Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 1742130 - 1742223
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||||  ||||||||||| |||||||||||||||||||||| |||  ||| |||||||  ||  ||||||||| |||||||||||||||||    
T  1742130 gtggttttaggtcattttttgacctagaatcacccctctccatct-tttcccccttttctttcaatctaaataagtggttttcacatatatcaag 1742223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 18939160 - 18939263
Alignment:
Q  19 atcgagaagatgtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatat 118  Q
    |||||| ||| |||||||||  ||||||||||||||||||||||| |||| ||||  ||||||||||||||||  ||  ||||||||  |||||||| ||    
T  18939160 atcgaggagaggtggttttaggtcattttttgatctagaatcacctctctgcatc--tttttcccctttctttcaatttaaataagtagttttcacacat 18939257  T
Q  119 atcaag 124  Q
    ||||||    
T  18939258 atcaag 18939263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 7337905 - 7337812
Alignment:
Q  31 tggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||| ||| |||||||||||||||||||||||||||| ||||| |||| | | |||||||  ||  ||||||||| ||||||||| |||||||    
T  7337905 tggttctatgtcattttttgatctagaatcacccctctacatcttttttcctcttttctttcaatctaaataagtggttttcacatctatcaag 7337812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 34528543 - 34528650
Alignment:
Q  5 tttttctttcacttatcga-gaagatgtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataa 103  Q
    ||||||||||||| ||||| || || |||||||||| ||||||||||| |||||||||||||||| ||||   |||| |||||||||| |||  ||||||    
T  34528543 tttttctttcactcatcgaagatga-gtggttttatgtcattttttgacctagaatcacccctctgcatc---tttttccctttctttcgatctaaataa 34528638  T
Q  104 gtgattttcaca 115  Q
    ||||||| ||||    
T  34528639 gtgatttccaca 34528650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 232
Target Start/End: Original strand, 47132870 - 47132959
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt-gtttggttcatat 232  Q
    ||||||||||||||  |||||||||||||| |||| || |||||| || ||| ||||||||||||||||| ||||| ||||| |||||||    
T  47132870 tcgtcgtctgagtggggcgttgtgttgttcgtcgttttgtgcggcgttgtttaatttcgcgtcttgttgcggtgttcgtttgcttcatat 47132959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 15435113 - 15435022
Alignment:
Q  32 ggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||  ||||||||||||||||||||| |||||| ||||| |||||||| |||||||  ||  ||||||||| |||||||||| ||||||    
T  15435113 ggttttaggtcattttttgatctagaatcaaccctctacatct-tttttcccttttctttcaatctaaataagtgtttttcacataaatcaag 15435022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 124
Target Start/End: Complemental strand, 8212149 - 8212059
Alignment:
Q  34 ttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||| || ||||||||||||| ||||||| |||| ||||| ||||| || |||||||  ||  ||||||||| |||||||||||||||||    
T  8212149 ttttagattattttttgatctacaatcacctctctacatcttttttttccttttctttaaatctaaataagtggttttcacatatatcaag 8212059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 45789415 - 45789498
Alignment:
Q  31 tggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacat 116  Q
    ||||||||  ||||||||||| |||||||||||||||| ||||  ||||||||||||||||  ||  ||||||||| |||||||||    
T  45789415 tggttttaggtcattttttgacctagaatcacccctctgcatc--tttttcccctttctttcaatttaaataagtggttttcacat 45789498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 124
Target Start/End: Complemental strand, 23291874 - 23291792
Alignment:
Q  41 tcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||||||||| |||||||||||||||  ||||| |||||| | |||||||  ||  ||||||||| |||||||||||||||||    
T  23291874 tcattttttgacctagaatcacccctcgacatct-tttttctcttttctttcaatctaaataagtggttttcacatatatcaag 23291792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 940214 - 940307
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||||  ||||||||| | |||||||||||| ||| |||||  ||| ||| |||||||| ||  ||||||||| |||||||||||||||||    
T  940214 gtggttttaagtcatttttt-acctagaatcacccatctgcatcttgtttccccttttcttttaatttaaataagtggttttcacatatatcaag 940307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 7837009 - 7836949
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttt 91  Q
    |||||||||  |||||||||||||||||||||||||||  ||||| |||||||| |||||||    
T  7837009 gtggttttaggtcattttttgatctagaatcacccctcgacatct-tttttcccttttcttt 7836949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 24582937 - 24583006
Alignment:
Q  163 ttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgttgtttggttcatat 232  Q
    ||||||||||||||| ||| |||||| || |||||||| || ||||||||| |||||  |||||||||||    
T  24582937 ttgtgttgttcatcgccttgtgcggcgttgtttgatttggcatcttgttgcggtgttcgttggttcatat 24583006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 232
Target Start/End: Original strand, 41994398 - 41994483
Alignment:
Q  148 cgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt-gtttggttcatat 232  Q
    ||||||| ||| |||||||||||||||||||||| ||| || || ||||||||||  ||||||||  ||||| |||| ||||||||    
T  41994398 cgtctgaatgcggcgttgtgttgttcatcgtcttgtgcagcgttgtttgatttcggatcttgttgtggtgttcgtttcgttcatat 41994483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 5983686 - 5983780
Alignment:
Q  31 tggttttatatcattttttgatctagaatcacccctctccatctatttttcccc--tttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||| |||||||||||| |||||||||| | ||| ||||| |||||||||  ||||||| |||  |||||| || ||||||||| |||||||    
T  5983686 tggttttagatcattttttgacctagaatcactcgtctacatct-tttttcccctttttctttcgatctaaataaatggttttcacatctatcaag 5983780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 232
Target Start/End: Original strand, 19060877 - 19060965
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgttgtttggttcatat 232  Q
    ||||||||| |||||  | ||||||||||| ||||||| || ||| || ||||||||  | |||||||||||||||  |||||||||||    
T  19060877 tcgtcgtctaagtgcgaccttgtgttgttcgtcgtcttgtgtggcgttgtttgatttgacatcttgttgcagtgttcgttggttcatat 19060965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 124
Target Start/End: Complemental strand, 24597520 - 24597472
Alignment:
Q  76 tttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||| ||||||||||| ||| |||||| ||||||||||||||||||||    
T  24597520 ttttttccctttcttttaatataaataaatgattttcacatatatcaag 24597472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 232
Target Start/End: Original strand, 44543240 - 44543328
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgttgtttggttcatat 232  Q
    ||||||||| |||||  | ||||||||||| |||| ||||||||| || |||||||| || |||| |||| |||||  |||||||||||    
T  44543240 tcgtcgtctaagtgcgactttgtgttgttcgtcgtattatgcggcgttgtttgatttggcatcttattgcggtgttcgttggttcatat 44543328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 32679217 - 32679158
Alignment:
Q  147 tcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtc 206  Q
    |||||||||||| |||||||||||||| || |||| |||||| |  ||||||||||||||    
T  32679217 tcgtctgagtgcggcgttgtgttgttcgtcatcttgtgcggcgtagtttgatttcgcgtc 32679158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 124
Target Start/End: Complemental strand, 36775938 - 36775866
Alignment:
Q  50 gatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||||||||||||||||| ||||  ||||| ||||||||||  ||  |||||| ||||||||||||| ||||||    
T  36775938 gatctagaatcacccctctgcatc--ttttttccctttctttcaatctaaataaatgattttcacatacatcaag 36775866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 232
Target Start/End: Original strand, 43412343 - 43412430
Alignment:
Q  146 gtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtg-ttgtttggttcatat 232  Q
    ||||||||||||  | | |||||||||||||||||| |||| | |||||||| |||| ||||  |||||||| ||||||| |||||||    
T  43412343 gtcgtctgagtgatgtgctgtgttgttcatcgtcttttgcgacgttatttgagttcgtgtctaattgcagtgtttgtttgattcatat 43412430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 121
Target Start/End: Complemental strand, 569011 - 568936
Alignment:
Q  44 ttttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatc 121  Q
    |||||| | |||||||| ||||||| |||||  |||||||||||||||  ||  ||||||||||||||||| ||||||    
T  569011 tttttttacctagaatcccccctctacatct--ttttcccctttctttcaatctaaataagtgattttcacgtatatc 568936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 10776581 - 10776539
Alignment:
Q  146 gtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggc 188  Q
    ||||||| ||||| |||||||||||||| ||||||||||||||    
T  10776581 gtcgtctaagtgcggcgttgtgttgttcgtcgtcttatgcggc 10776539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 80
Target Start/End: Complemental strand, 10776703 - 10776653
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctattttt 80  Q
    ||||||||| |||||||||||| |||||||||||| ||| ||||| |||||    
T  10776703 gtggttttagatcattttttgacctagaatcacccatctacatcttttttt 10776653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 14872477 - 14872583
Alignment:
Q  19 atcgagaagatgtggttttatatcattttttgatctagaatcacccctctccatctatttttccc-ctttcttttgatacaaataagtgattttcacata 117  Q
    ||||||||| |||||||||   |||||||||||  ||||||||| ||||| ||||| ||||||||  |||||||  ||  ||||||||| |||| ||| |    
T  14872477 atcgagaaggtgtggttttcggtcattttttgacttagaatcactcctctacatctttttttccctttttctttcaatgtaaataagtggtttttacaaa 14872576  T
Q  118 tatcaag 124  Q
    |||||||    
T  14872577 tatcaag 14872583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 34878514 - 34878421
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||||  ||||||||||| |||||||||| | ||| ||||| |||||||  |||||||  ||  ||||||||| |||||||| ||||||||    
T  34878514 gtggttttaggtcattttttgacctagaatcactcatctacatct-tttttccattttctttcaatttaaataagtggttttcacacatatcaag 34878421  T

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Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 124
Target Start/End: Original strand, 48750055 - 48750131
Alignment:
Q  46 ttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||| |||||||||| ||| | ||||| ||||||||||||||||  ||  |||||||||||||||||||| ||||||    
T  48750055 ttttgacctagaatcactcct-tgcatct-tttttcccctttctttcaatctaaataagtgattttcacatacatcaag 48750131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 232
Target Start/End: Original strand, 9341694 - 9341783
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtg-ttgtttggttcatat 232  Q
    |||||||||||||| || ||| |||||||| ||||||| ||| || || |||||||  | |||||||||| ||| ||||||| |||||||    
T  9341694 tcgtcgtctgagtggagtgttatgttgttcgtcgtcttgtgcagcgttgtttgattctgtgtcttgttgcggtgtttgtttgattcatat 9341783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 16161801 - 16161858
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttc 201  Q
    ||||||||| |||||  ||||||||||||| ||||||| |||||| || |||||||||    
T  16161801 tcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttc 16161858  T

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Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 219
Target Start/End: Complemental strand, 35484513 - 35484441
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt 219  Q
    ||||||||| ||||| |||||||||||||| ||||||| ||||   | ||||| ||||||||||||| || |||||    
T  35484513 tcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcg---tcatttgctttcgcgtcttgtcgcggtgtt 35484441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 49626900 - 49626969
Alignment:
Q  163 ttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgttgtttggttcatat 232  Q
    ||||||||||| ||||||| |||||| || ||||||||  | ||||||||| |||||  |||||||||||    
T  49626900 ttgtgttgttcgtcgtcttgtgcggcgttgtttgatttgacatcttgttgcggtgttcgttggttcatat 49626969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 1742251 - 1742314
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgt 210  Q
    ||||||||| ||||| |||||||||||||| ||||||| |||| |    ||||||||||||||||||    
T  1742251 tcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgac---gtttgatttcgcgtcttgt 1742314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 8212032 - 8211988
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggc 188  Q
    ||||||||| | ||| |||||||||||||||||||||| ||||||    
T  8212032 tcgtcgtctaaatgcggcgttgtgttgttcatcgtcttgtgcggc 8211988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 87
Target Start/End: Complemental strand, 11462678 - 11462635
Alignment:
Q  43 attttttgatctagaatcacccctctccatctatttttccccttt 87  Q
    ||||||||| |||||||||||||||| ||||| ||||||||||||    
T  11462678 attttttgacctagaatcacccctctgcatct-tttttccccttt 11462635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 12635141 - 12635193
Alignment:
Q  148 cgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgattt 200  Q
    |||||| |||| |||||||||||||| ||||||| |||||| || ||||||||    
T  12635141 cgtctgtgtgcggcgttgtgttgttcgtcgtcttgtgcggcgttgtttgattt 12635193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 120
Target Start/End: Complemental strand, 31692727 - 31692618
Alignment:
Q  9 tctttcacttatcgagaagatgtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgat 108  Q
    ||||||||| |||||| |  |||| |||||  ||||||||||| || ||||||||||||| ||| | |||||  ||||||||| |||  || ||| ||||    
T  31692727 tctttcactcatcgaggatgtgtgattttaggtcattttttgaccttgaatcacccctctgcattttttttt--cctttctttcgatctaagtaattgat 31692630  T
Q  109 tttcacatatat 120  Q
    ||||||| ||||    
T  31692629 tttcacacatat 31692618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 212
Target Start/End: Original strand, 39724949 - 39725017
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttg 212  Q
    ||||||||||||||  ||| ||| ||||||| ||||||| ||| |||| ||||||||| || |||||||    
T  39724949 tcgtcgtctgagtgtggcgatgttttgttcaacgtcttacgcgacattgtttgatttctcgccttgttg 39725017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 44543165 - 44543213
Alignment:
Q  76 tttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||| |||||||||| |||  |||||||||||||||||| ||||||||    
T  44543165 ttttttccctttctttcgatctaaataagtgattttcacaaatatcaag 44543213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 2e-20; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 40556557 - 40556651
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||||  ||||||||||| |||||||||||||||  ||||| |||||||| |||||||||||| ||||||||| |||||| || |||||||    
T  40556557 gtggttttaggtcattttttgacctagaatcacccctccacatctttttttcccttttcttttgatataaataagtggttttcatatctatcaag 40556651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 47042295 - 47042203
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatca 122  Q
    |||||||||  ||||||||| | ||| |||||||||||| ||||| |||||||| |||||||  ||  |||||||||||||||||||||||||    
T  47042295 gtggttttaggtcattttttaacctataatcacccctctacatctttttttcccttttctttcaatttaaataagtgattttcacatatatca 47042203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 120
Target Start/End: Original strand, 29239164 - 29239273
Alignment:
Q  9 tctttcacttatcgagaagatgtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgat 108  Q
    ||||||| || ||||||| | |||||||||  ||||||||||||||||||||||||| || ||||| |||||  ||||||||| |||  |||||| ||||    
T  29239164 tctttcatttgtcgagaa-aggtggttttaggtcattttttgatctagaatcacccc-ctacatctttttttttcctttctttagatctaaataaatgat 29239261  T
Q  109 tttcacatatat 120  Q
    ||||||||||||    
T  29239262 tttcacatatat 29239273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 121
Target Start/End: Original strand, 33579714 - 33579804
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatc 121  Q
    |||||||||  ||||||||||| |||||||||||||||| ||||| |||||||  |||||||  ||  ||||||||||||||||||||||||    
T  33579714 gtggttttaagtcattttttgacctagaatcacccctctacatct-tttttccattttctttcaatctaaataagtgattttcacatatatc 33579804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 232
Target Start/End: Complemental strand, 12947399 - 12947310
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt-gtttggttcatat 232  Q
    ||||||| ||||||| || ||||||||||| ||||||| |||||| || ||||||||||| ||||||||  ||||| |||||||||||||    
T  12947399 tcgtcgtttgagtgcggctttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcttgttgtggtgttcgtttggttcatat 12947310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 232
Target Start/End: Complemental strand, 53807982 - 53807894
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgttgtttggttcatat 232  Q
    ||||||||| |||||  | ||||||||||| ||||||| ||||||||| |||||||| || ||||||||| |||||  |||||||||||    
T  53807982 tcgtcgtctaagtgcgaccttgtgttgttcgtcgtcttctgcggcattgtttgatttggcatcttgttgctgtgttcgttggttcatat 53807894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 45 - 123
Target Start/End: Original strand, 7546471 - 7546550
Alignment:
Q  45 tttttgatctagaatcacccctctccatc-tatttttcccctttcttttgatacaaataagtgattttcacatatatcaa 123  Q
    |||||||||||||||||||||||| |||| | ||||||||| ||||||  ||  |||||||||||||||||||| |||||    
T  7546471 tttttgatctagaatcacccctctgcatcttttttttcccccttctttcaatctaaataagtgattttcacatacatcaa 7546550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 124
Target Start/End: Original strand, 8914529 - 8914644
Alignment:
Q  9 tctttcacttatcgagaagatgtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgat 108  Q
    ||||||||| |||||||||  ||| |||||  ||| ||||||| ||||||| |||||||| ||||| ||||| ||| || |||| ||  ||||||| |||    
T  8914529 tctttcactcatcgagaaggggtgattttaggtcaatttttgacctagaataacccctctgcatcttttttttcccctttttttaattaaaataagggat 8914628  T
Q  109 tttcacatatatcaag 124  Q
    ||||||||| ||||||    
T  8914629 tttcacatacatcaag 8914644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 20465210 - 20465119
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||||| |||||||| ||  ||||||||||||||||| |||  ||||||||||| |||  ||| |||||||||||||| ||||||||||||    
T  20465210 gtggttttatgtcattttt-gacatagaatcacccctctccctct--ttttcccctttttttcaatataaataagtgattttaacatatatcaag 20465119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 124
Target Start/End: Complemental strand, 21290083 - 21289970
Alignment:
Q  9 tctttcacttatcgagaagatgtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgat 108  Q
    ||||||||| || ||| ||| ||| |||||  ||| ||||||| |||||||||||||||| ||||| ||||||||| ||||||  || ||||||||||||    
T  21290083 tctttcactcatggaggagaggtgattttaggtcaatttttgacctagaatcacccctctgcatct-tttttcccc-ttctttcaatccaaataagtgat 21289986  T
Q  109 tttcacatatatcaag 124  Q
    ||| ||||| ||||||    
T  21289985 tttaacatacatcaag 21289970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 41 - 124
Target Start/End: Original strand, 29921910 - 29921992
Alignment:
Q  41 tcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||||||||| ||| ||||||  |||||||||| ||||||||||||||||  ||  ||||||||||||| |||||||||||||    
T  29921910 tcattttttgagctaaaatcacttctctccatct-tttttcccctttctttcaatctaaataagtgatttccacatatatcaag 29921992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 41 - 124
Target Start/End: Original strand, 29971063 - 29971145
Alignment:
Q  41 tcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||||||||| ||| ||||||  |||||||||| ||||||||||||||||  ||  ||||||||||||| |||||||||||||    
T  29971063 tcattttttgagctaaaatcacttctctccatct-tttttcccctttctttcaatctaaataagtgatttccacatatatcaag 29971145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 124
Target Start/End: Complemental strand, 50194547 - 50194433
Alignment:
Q  9 tctttcacttatcgagaagatgtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgat 108  Q
    |||||||||  ||||||||  ||||||||| |||||||||||| ||| ||||||| |||| ||||  |||||||| | |||||  ||  |||||||||||    
T  50194547 tctttcactcgtcgagaaggagtggttttagatcattttttgacctaaaatcacctctctgcatc-ctttttcccttctctttcaatctaaataagtgat 50194449  T
Q  109 tttcacatatatcaag 124  Q
    || |||||||||||||    
T  50194448 ttccacatatatcaag 50194433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 629169 - 629055
Alignment:
Q  10 ctttcacttatcgagaagatgtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgatt 109  Q
    |||||||| |||||| ||  |||||||||  ||||| ||||| ||| ||||| || ||| ||||| ||||| ||| |||||| |||  ||||||||||||    
T  629169 ctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaatcatccttctgcatcttttttttccccttctttcgatctaaataagtgatt 629070  T
Q  110 ttcacatatatcaag 124  Q
    |||||| ||||||||    
T  629069 ttcacaaatatcaag 629055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 10232916 - 10233010
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||||  ||||||||||| |||||||||||||||| ||||| |||| ||| |||||||  ||  ||||||||| ||||||| | |||||||    
T  10232916 gtggttttaggtcattttttgacctagaatcacccctctacatcttttttccccttttctttcaatctaaataagtggttttcacgtctatcaag 10233010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 228
Target Start/End: Original strand, 29239309 - 29239391
Alignment:
Q  147 tcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt-gtttggttc 228  Q
    |||||||||||| |||||||||||||| ||||||| ||||||  | ||||||||| ||||||||||  ||||| |||||||||    
T  29239309 tcgtctgagtgcggcgttgtgttgttcgtcgtcttgtgcggcgctgtttgatttcacgtcttgttgtggtgttcgtttggttc 29239391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 36461674 - 36461580
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||||  ||||||||||| ||| | |||||||||| ||||| |||| ||| |||||||  ||  ||||||||||||||||||| |||||||    
T  36461674 gtggttttaggtcattttttgacctatattcacccctctacatcttttttccccttttctttcaatctaaataagtgattttcacatctatcaag 36461580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 47895997 - 47896091
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||| || |||||||||||| |||||||||||||||| ||||| ||||  |  |||||||  ||  ||||||||| |||||||||||||||||    
T  47895997 gtggttatagatcattttttgacctagaatcacccctctacatcttttttctctttttctttcaatctaaataagtggttttcacatatatcaag 47896091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 124
Target Start/End: Complemental strand, 51303877 - 51303789
Alignment:
Q  34 ttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||| ||| ||||||| |||||||||||| ||| ||||| |||||||||||| |||  || ||||||||||||||||||||| ||||||    
T  51303877 ttttatgtcaatttttgacctagaatcaccc-tctgcatct-tttttcccctttttttcaatccaaataagtgattttcacatacatcaag 51303789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 219
Target Start/End: Original strand, 40487291 - 40487364
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt 219  Q
    ||||||||| ||||| |||||||||||||| ||||||| |||||| |  |||||||||||||||||| || |||||    
T  40487291 tcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgt--tttgatttcgcgtcttgtcgcggtgtt 40487364  T

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Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 124
Target Start/End: Complemental strand, 6954928 - 6954845
Alignment:
Q  41 tcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||||||||| |||||||||||||||| ||||| |||| ||| |||||||  ||  |||||||||  |||||||| |||||||    
T  6954928 tcattttttgacctagaatcacccctctacatcttttttccccttttctttcaatctaaataagtgggtttcacatctatcaag 6954845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 9797773 - 9797678
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatc-tatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||||  ||||||||||| |||||||||||||||| |||| | |||||| | |||||||  ||  ||||||||| ||||||||| |||||||    
T  9797773 gtggttttaggtcattttttgacctagaatcacccctctacatcttttttttctcttttctttcaatctaaataagtggttttcacatctatcaag 9797678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 120
Target Start/End: Original strand, 22290798 - 22290873
Alignment:
Q  45 tttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatat 120  Q
    ||||||||||||||||| | || | ||||| |||| || ||||||||| ||  |||||||||||||||||||||||    
T  22290798 tttttgatctagaatcatctctttgcatcttttttccctctttcttttaatctaaataagtgattttcacatatat 22290873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 124
Target Start/End: Complemental strand, 52923344 - 52923266
Alignment:
Q  45 tttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||||| |||||||||||||||| ||||| |||||||| |||||||  ||  ||||||||| ||||||||| |||||||    
T  52923344 tttttgacctagaatcacccctctacatct-tttttcccttttctttcaatctaaataagtggttttcacatctatcaag 52923266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 146 - 212
Target Start/End: Original strand, 25842641 - 25842707
Alignment:
Q  146 gtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttg 212  Q
    ||||| |||||||  |||||||||||||||| |||| ||||| ||| ||||||||| ||||||||||    
T  25842641 gtcgtttgagtgcgacgttgtgttgttcatcatcttctgcggtattgtttgatttctcgtcttgttg 25842707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 54148834 - 54148928
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||||  ||||||||||| ||| |||||||||||| ||||| |||| | | |||||||  ||  ||||||||| ||||||||| |||||||    
T  54148834 gtggttttaggtcattttttgacctacaatcacccctctacatcttttttcctcttttctttcaatctaaataagtggttttcacatctatcaag 54148928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 232
Target Start/End: Original strand, 35175367 - 35175456
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt-gtttggttcatat 232  Q
    ||||||||||||| |  | ||||||||||||||||||| ||| || || |||||||||  |||||||||| ||||| |||||||| ||||    
T  35175367 tcgtcgtctgagtacgacattgtgttgttcatcgtcttgtgcagcgttgtttgatttcatgtcttgttgcggtgttcgtttggtttatat 35175456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 219
Target Start/End: Complemental strand, 36461553 - 36461481
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt 219  Q
    ||||||||| ||||| |||||||||||||| ||||||| ||||||    |||||||||||||||||| || |||||    
T  36461553 tcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgtcttgtcgcggtgtt 36461481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 212
Target Start/End: Original strand, 41818194 - 41818243
Alignment:
Q  163 ttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttg 212  Q
    ||||||||||| ||||||| ||||| ||| ||||||||||||||||||||    
T  41818194 ttgtgttgttcgtcgtcttgtgcggtattgtttgatttcgcgtcttgttg 41818243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 219
Target Start/End: Complemental strand, 43488712 - 43488640
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt 219  Q
    ||||||||| ||||  |||||||||||||| ||||||| ||||||    ||||||||||||||||||||| |||||    
T  43488712 tcgtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgtcttgttgcggtgtt 43488640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 124
Target Start/End: Original strand, 9998327 - 9998407
Alignment:
Q  44 ttttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||| |||||||||||||||| ||||| |||| ||| |||||||  ||  ||||||||| ||||||| | |||||||    
T  9998327 ttttttgacctagaatcacccctctacatcttttttccccttttctttcaatctaaataagtggttttcacgtctatcaag 9998407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 124
Target Start/End: Complemental strand, 43488819 - 43488739
Alignment:
Q  44 ttttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||| |||||||||||||||| ||||| |||| ||  |||||||  ||  ||||||||| ||||||||| |||||||    
T  43488819 ttttttgacctagaatcacccctctacatcttttttccctttttctttcaatctaaataagtggttttcacatctatcaag 43488739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 7546573 - 7546632
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgc 203  Q
    ||||||||| |||||  ||||||||||||| ||||||| |||||| || |||||||||||    
T  7546573 tcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgc 7546632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 124
Target Start/End: Original strand, 53508082 - 53508160
Alignment:
Q  45 tttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||||| ||| |||||||| ||| | ||| |||||||  |||||||  ||| |||||||||||||||||||||||||||    
T  53508082 tttttgacctaaaatcacccatctgcgtct-tttttcctttttctttcaatataaataagtgattttcacatatatcaag 53508160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 124
Target Start/End: Original strand, 10108098 - 10108176
Alignment:
Q  46 ttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||| |||||||||||||||| ||||| |||| ||| |||||||  ||  ||||||||| ||||||| | |||||||    
T  10108098 ttttgacctagaatcacccctctacatcttttttccccttttctttcaatctaaataagtggttttcacgtctatcaag 10108176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 210
Target Start/End: Complemental strand, 25461126 - 25461060
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgt 210  Q
    ||||||| ||||||| ||||| |||||||| |||||||||||| | || |||||||| | |||||||    
T  25461126 tcgtcgtttgagtgcggcgttatgttgttcgtcgtcttatgcgacgttgtttgattttgtgtcttgt 25461060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 45568687 - 45568593
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||||  ||||||||||||||||||| | || ||| ||||| |||| ||| |||||||  ||  ||||||||  ||||||||| |||||||    
T  45568687 gtggttttaggtcattttttgatctagaataatccatctacatcttttttccccttttctttcaatctaaataagttgttttcacatctatcaag 45568593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 219
Target Start/End: Original strand, 9998433 - 9998505
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt 219  Q
    ||||||||| ||||| |||||||||||||| ||||||| ||||||    ||||||||||||| |||| || |||||    
T  9998433 tcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgttttgtcgcggtgtt 9998505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 219
Target Start/End: Original strand, 10108202 - 10108274
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt 219  Q
    ||||||||| ||||| |||||||||||||| ||||||| ||||||    ||||||||||||| |||| || |||||    
T  10108202 tcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgttttgtcgcggtgtt 10108274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 219
Target Start/End: Original strand, 10233036 - 10233108
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt 219  Q
    ||||||||| ||||| |||||||||||||| ||||||| ||||||    ||||||||||||| |||| || |||||    
T  10233036 tcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgttttgtcgcggtgtt 10233108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 201
Target Start/End: Original strand, 42460725 - 42460766
Alignment:
Q  160 gcgttgtgttgttcatcgtcttatgcggcattatttgatttc 201  Q
    |||||||||||||||||||||| |||||| || |||||||||    
T  42460725 gcgttgtgttgttcatcgtcttgtgcggcgttgtttgatttc 42460766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 48650978 - 48650921
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttccccttt 87  Q
    |||||||||  ||||||||||| ||| |||||||||||  ||||| ||||||||||||    
T  48650978 gtggttttaggtcattttttgacctaaaatcacccctcgacatctttttttccccttt 48650921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 212
Target Start/End: Original strand, 3606739 - 3606807
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttg 212  Q
    ||||||||||||||| || ||||||||||| ||||||| || ||| || | |||| || ||||||||||    
T  3606739 tcgtcgtctgagtgcggcattgtgttgttcgtcgtcttgtgtggcgttgtatgatatcccgtcttgttg 3606807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 124
Target Start/End: Original strand, 29249105 - 29249182
Alignment:
Q  45 tttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||||| ||||||||||  |||| |||||  |||||| ||||| || |||  ||||||||| |||||||||||||||||    
T  29249105 tttttgacctagaatcacttctcttcatct--ttttcctctttcgttcgatctaaataagtgtttttcacatatatcaag 29249182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 37040632 - 37040704
Alignment:
Q  45 tttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacata 117  Q
    ||||||| |||||||||||||||| ||||| |||| ||  |||||||  ||  ||||||||| ||||||||||    
T  37040632 tttttgacctagaatcacccctctacatcttttttcccattttctttcaatctaaataagtggttttcacata 37040704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 40556678 - 40556722
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggc 188  Q
    ||||||||| ||||| |||||||||||||| ||||||| ||||||    
T  40556678 tcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggc 40556722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 210
Target Start/End: Complemental strand, 45568567 - 45568504
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgt 210  Q
    ||||||||| ||||| |||||||||||||| ||||||| || |||    ||||||||||||||||||    
T  45568567 tcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgtggc---gtttgatttcgcgtcttgt 45568504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 124
Target Start/End: Complemental strand, 52116208 - 52116160
Alignment:
Q  76 tttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||| |||||| |||| ||  |||||||||||||||||||||||||||    
T  52116208 ttttttccctttgttttaatttaaataagtgattttcacatatatcaag 52116160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 6e-18; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 144 - 229
Target Start/End: Complemental strand, 8443634 - 8443548
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt-gtttggttca 229  Q
    ||||||||| ||||| | |||||||||||| ||||||| |||||| || ||||||| ||||||||||||||||||| ||||||||||    
T  8443634 tcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgttgtttgattccgcgtcttgttgcagtgttcgtttggttca 8443548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 116
Target Start/End: Complemental strand, 18890967 - 18890861
Alignment:
Q  9 tctttcacttatcgagaagatgtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgat 108  Q
    |||||||||||||||||||  ||| |||||  ||| ||||||| |||||||||| | ||| ||||| ||||||||||||||||  ||  |||||||||||    
T  18890967 tctttcacttatcgagaaggggtgattttaggtcaatttttgacctagaatcactcatctgcatct-tttttcccctttctttcaatctaaataagtgat 18890869  T
Q  109 tttcacat 116  Q
    ||||||||    
T  18890868 tttcacat 18890861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 116
Target Start/End: Original strand, 37971140 - 37971226
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacat 116  Q
    |||||||||  ||||||||||| |||||||||||||||| ||||| |||| ||| |||||||  ||  |||||||||||||||||||    
T  37971140 gtggttttaggtcattttttgacctagaatcacccctctacatcttttttccccttttctttcaatctaaataagtgattttcacat 37971226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 232
Target Start/End: Complemental strand, 1239519 - 1239431
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgttgtttggttcatat 232  Q
    ||||||||| |||||  | ||||||||||||||||||| |||||| || |||||||| || ||||||||| |||||  |||||||||||    
T  1239519 tcgtcgtctaagtgcgaccttgtgttgttcatcgtcttgtgcggcgttgtttgatttggcatcttgttgcggtgttcgttggttcatat 1239431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 232
Target Start/End: Original strand, 8826178 - 8826266
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgttgtttggttcatat 232  Q
    ||||||||||||||||||||| |||||||| ||||||| || ||| || | ||| |||| |||||||||| ||||| |||| |||||||    
T  8826178 tcgtcgtctgagtgcagcgttatgttgttcgtcgtcttgtgtggcgttgtgtgaattcgtgtcttgttgcggtgttctttgattcatat 8826266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 124
Target Start/End: Original strand, 15344133 - 15344247
Alignment:
Q  9 tctttcacttatcgagaagatgtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgat 108  Q
    ||||||||| |||||| ||  |||||||||  ||||| ||||| ||| ||| |||||||| ||||| |||||||||||| | | |||  |||||||||||    
T  15344133 tctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaattacccctctgcatct-tttttcccctttatatggatctaaataagtgat 15344231  T
Q  109 tttcacatatatcaag 124  Q
    ||||||| ||||||||    
T  15344232 tttcacaaatatcaag 15344247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 124
Target Start/End: Original strand, 15433198 - 15433312
Alignment:
Q  9 tctttcacttatcgagaagatgtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgat 108  Q
    ||||||||| |||||| ||  |||||||||  ||||| ||||| ||| ||| |||||||| ||||| |||||||||||| | | |||  |||||||||||    
T  15433198 tctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaattacccctctgcatct-tttttcccctttatatggatctaaataagtgat 15433296  T
Q  109 tttcacatatatcaag 124  Q
    ||||||| ||||||||    
T  15433297 tttcacaaatatcaag 15433312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 124
Target Start/End: Original strand, 15524502 - 15524616
Alignment:
Q  9 tctttcacttatcgagaagatgtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgat 108  Q
    ||||||||| |||||| ||  |||||||||  ||||| ||||| ||| ||| |||||||| ||||| |||||||||||| | | |||  |||||||||||    
T  15524502 tctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaattacccctctgcatct-tttttcccctttatatggatctaaataagtgat 15524600  T
Q  109 tttcacatatatcaag 124  Q
    ||||||| ||||||||    
T  15524601 tttcacaaatatcaag 15524616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 20559985 - 20559893
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccc-tttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||||||| ||||||||| || |||||||||||||||| |||   ||||||||| |||||||  ||  ||||||||||||||||||| |||||||    
T  20559985 gtggttttagatcatttttggacctagaatcacccctctacat---tttttccccttttctttcaatctaaataagtgattttcacatctatcaag 20559893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 20571547 - 20571455
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccc-tttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||||||| ||||||||| || |||||||||||||||| |||   ||||||||| |||||||  ||  ||||||||||||||||||| |||||||    
T  20571547 gtggttttagatcatttttggacctagaatcacccctctacat---tttttccccttttctttcaatctaaataagtgattttcacatctatcaag 20571455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 1239644 - 1239553
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatca 122  Q
    |||||||||  || || ||||| ||| |||||||||||| ||||| ||||||||||||| || |||  |||||||||||||||||| ||||||    
T  1239644 gtggttttaggtccttctttgacctaaaatcacccctctgcatct-tttttcccctttcgttcgatctaaataagtgattttcacaaatatca 1239553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 124
Target Start/End: Original strand, 8826035 - 8826151
Alignment:
Q  9 tctttcacttatcgagaagatgtggttttatatcattttttgatctagaatca-cccctctccatctatttttcccctttcttttgatacaaataagtga 107  Q
    ||||||||| |||||| |   |||||||||  ||||||||||||||||||||| ||||| |  |||| |||| ||||||| ||| |||  ||||||||||    
T  8826035 tctttcactcatcgaggatgggtggttttaggtcattttttgatctagaatcaccccctttgtatcttttttccccctttatttcgatctaaataagtga 8826134  T
Q  108 ttttcacatatatcaag 124  Q
    |||| ||| ||||||||    
T  8826135 tttttacacatatcaag 8826151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 124
Target Start/End: Original strand, 14585565 - 14585641
Alignment:
Q  48 ttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||| |||||||||||||||| ||||| |||||| | |||||||  ||  |||||||||||||||||||| ||||||    
T  14585565 ttgacctagaatcacccctctgcatctttttttctcttttctttcaatctaaataagtgattttcacatacatcaag 14585641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 29617379 - 29617312
Alignment:
Q  162 gttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt-gtttggttc 228  Q
    |||||||||||| ||||||| ||||||  | ||||||||||||||||||||| ||||| |||||||||    
T  29617379 gttgtgttgttcgtcgtcttgtgcggcgctgtttgatttcgcgtcttgttgcggtgttcgtttggttc 29617312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 121
Target Start/End: Complemental strand, 31013812 - 31013721
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatc 121  Q
    |||||||||  ||||||||||| |||||||||||||||| ||||| |||  ||| |||||||  ||  ||||||||| ||||||||| ||||    
T  31013812 gtggttttaggtcattttttgacctagaatcacccctctacatctttttcccccttttctttcaatctaaataagtggttttcacatctatc 31013721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 219
Target Start/End: Original strand, 34609799 - 34609874
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt 219  Q
    ||||||||| ||||| |||||| ||||||| ||||||| |||| | ||||||||||| | |||||||||| |||||    
T  34609799 tcgtcgtctaagtgcggcgttgggttgttcctcgtcttgtgcgacgttatttgattttgtgtcttgttgcggtgtt 34609874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 14545144 - 14545050
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcaccc-ctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaa 123  Q
    |||||||||  ||||||||||| ||| |||||||| |||| ||||| |||||| | |||||||  ||  ||||||||| ||||||||||||||||    
T  14545144 gtggttttaggtcattttttgacctaaaatcaccctctctacatctttttttctcttttctttcaatctaaataagtggttttcacatatatcaa 14545050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 28897559 - 28897653
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||||  ||||||||||||||| |||||||||||| ||||| |||| | | |||||||  ||  ||||||||| ||||||  |||||||||    
T  28897559 gtggttttaagtcattttttgatctaaaatcacccctctacatcttttttcctcttttctttcaatctaaataagtggttttcatgtatatcaag 28897653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 219
Target Start/End: Original strand, 3673410 - 3673482
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt 219  Q
    ||||||||| ||||| | |||||||||||| |||||||||||||   | |||||||||| |||||||||| |||||    
T  3673410 tcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttatgcgg---tgtttgatttcgtgtcttgttgcggtgtt 3673482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 124
Target Start/End: Original strand, 5046613 - 5046691
Alignment:
Q  44 ttttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||| | |||||||| ||||| | |||||  |||||||||||||||| ||  |||||||||||||||||| ||||||||    
T  5046613 tttttttacctagaatcgcccctatgcatct--ttttcccctttcttttaatttaaataagtgattttcacacatatcaag 5046691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 228
Target Start/End: Original strand, 5333395 - 5333480
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt-gtttggttc 228  Q
    ||||| ||||||||| | |||||||||||| ||||||| |||||  || |||||||| |||||||||| | ||||| |||||||||    
T  5333395 tcgtcatctgagtgcggtgttgtgttgttcgtcgtcttgtgcggtgttgtttgattttgcgtcttgttccggtgttcgtttggttc 5333480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 232
Target Start/End: Complemental strand, 24099378 - 24099289
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt-gtttggttcatat 232  Q
    |||||||||||||||  ||||||||||||| ||||| | | | || || ||||||||||| ||||||||| |||||  ||||||||||||    
T  24099378 tcgtcgtctgagtgcgacgttgtgttgttcgtcgtcctgtaccgcgttgtttgatttcgcatcttgttgcggtgttcatttggttcatat 24099289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 219
Target Start/End: Complemental strand, 28086933 - 28086861
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt 219  Q
    ||||||||| ||||| |||||||||||||| || |||| ||| |||||   |||||||||||||||| ||||||||    
T  28086933 tcgtcgtctaagtgctgcgttgtgttgttcgtcatcttgtgcagcatt---tgatttcgcgtcttgtcgcagtgtt 28086861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 232
Target Start/End: Complemental strand, 1236819 - 1236731
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgttgtttggttcatat 232  Q
    ||||||||| |||||  | ||||||||||| | ||||| |||||| || |||||||| || ||||||||| |||||  |||||||||||    
T  1236819 tcgtcgtctaagtgcgaccttgtgttgttcgttgtcttgtgcggcgttgtttgatttggcatcttgttgcggtgttcgttggttcatat 1236731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 115
Target Start/End: Complemental strand, 25191318 - 25191223
Alignment:
Q  19 atcgagaagatgtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcaca 115  Q
    |||||| ||| ||| |||||  ||||||||||| |||||||||||| ||| ||||| |||||||| |||||||  |   ||||||||||||||||||    
T  25191318 atcgaggagaggtgattttaggtcattttttgacctagaatcacccatctacatct-tttttcccttttctttcaaattaaataagtgattttcaca 25191223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 124
Target Start/End: Complemental strand, 24099488 - 24099410
Alignment:
Q  45 tttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||||| |||||||||||||||| ||| | | ||||| |||||||| |||  ||||||||||||| |||||| ||||||    
T  24099488 tttttgacctagaatcacccctctgcattt-tgtttcctctttctttcgatttaaataagtgatttccacatagatcaag 24099410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 33342448 - 33342503
Alignment:
Q  164 tgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt 219  Q
    |||||||||| |||||||||||||| || ||||||||| ||| ||||||| |||||    
T  33342448 tgtgttgttcttcgtcttatgcggcgttttttgatttcccgtattgttgcggtgtt 33342503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 232
Target Start/End: Original strand, 15344277 - 15344363
Alignment:
Q  146 gtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgttgtttggttcatat 232  Q
    ||||||| |||||| | ||||||||||| ||||||| |||||| |  ||||||||  | ||||||||| |||||  |||||||||||    
T  15344277 gtcgtctaagtgcaaccttgtgttgttcgtcgtcttgtgcggcgtagtttgatttgacatcttgttgcggtgttcgttggttcatat 15344363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 232
Target Start/End: Original strand, 15433342 - 15433428
Alignment:
Q  146 gtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgttgtttggttcatat 232  Q
    ||||||| |||||| | ||||||||||| ||||||| |||||| |  ||||||||  | ||||||||| |||||  |||||||||||    
T  15433342 gtcgtctaagtgcaaccttgtgttgttcgtcgtcttgtgcggcgtagtttgatttgacatcttgttgcggtgttcgttggttcatat 15433428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 232
Target Start/End: Original strand, 15524646 - 15524732
Alignment:
Q  146 gtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgttgtttggttcatat 232  Q
    ||||||| |||||| | ||||||||||| ||||||| |||||| |  ||||||||  | ||||||||| |||||  |||||||||||    
T  15524646 gtcgtctaagtgcaaccttgtgttgttcgtcgtcttgtgcggcgtagtttgatttgacatcttgttgcggtgttcgttggttcatat 15524732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 116
Target Start/End: Complemental strand, 20553486 - 20553401
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacat 116  Q
    ||||||||| ||||||||| || ||||||||||||| |  ||| | |||||||| |||||||  ||  |||||||||||||||||||    
T  20553486 gtggttttagatcatttttggacctagaatcaccccacaacat-tttttttcccttttctttcaatctaaataagtgattttcacat 20553401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 27110705 - 27110611
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||||  ||||||||||||||| |||||| | ||| ||||| |||| | | |||||||  ||  ||||||||| | |||||||||||||||    
T  27110705 gtggttttaggtcattttttgatctaaaatcacacatctacatcttttttactcttttctttcaatctaaataagtggtcttcacatatatcaag 27110611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 29937963 - 29938056
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||||||| ||||||||| || |||||||||||||||| ||||| ||||  || |||||||  |   ||||||||| |||||| ||||||||||    
T  29937963 gtggttttagatcattttt-gacctagaatcacccctctacatcttttttcgccttttctttcaacctaaataagtggttttcatatatatcaag 29938056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 124
Target Start/End: Original strand, 6831490 - 6831531
Alignment:
Q  83 cctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||||||| ||| ||||||||||| ||||||||||||||||    
T  6831490 cctttctttcgattcaaataagtgaatttcacatatatcaag 6831531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 124
Target Start/End: Original strand, 3240238 - 3240318
Alignment:
Q  44 ttttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||| |||||||||||||| ||| ||||| ||||| |  || ||||  ||  ||||||||||||| |||||||||||||    
T  3240238 tttttttatctagaatcacccatctgcatcttttttttcatttcctttcaatctaaataagtgatttccacatatatcaag 3240318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 7677400 - 7677321
Alignment:
Q  147 tcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt-gtttggttc 228  Q
    |||||| | ||| |||||||||||||| ||||||| ||| ||   ||||||||||||||||||| || ||||| |||||||||    
T  7677400 tcgtctaattgcggcgttgtgttgttcgtcgtcttgtgctgc---atttgatttcgcgtcttgtcgcggtgttcgtttggttc 7677321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 7677521 - 7677477
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatct 74  Q
    |||||||||  ||||||||||| |||||||||||||||| |||||    
T  7677521 gtggttttaggtcattttttgacctagaatcacccctctacatct 7677477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 124
Target Start/End: Complemental strand, 7883467 - 7883387
Alignment:
Q  45 tttttgatctagaatcacccctctccatctatttttcc-cctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||||||||| |||||||||||| ||||| |||| || | |||||||  ||  ||||||||| ||||||||| |||||||    
T  7883467 tttttgatctataatcacccctctacatcttttttccctcttttctttcaatctaaataagtggttttcacatctatcaag 7883387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 121
Target Start/End: Complemental strand, 8443715 - 8443671
Alignment:
Q  77 ttttcccctttcttttgatacaaataagtgattttcacatatatc 121  Q
    ||||||||||||||| |||  ||||||||||||| ||||||||||    
T  8443715 ttttcccctttctttcgatctaaataagtgatttccacatatatc 8443671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 20553361 - 20553317
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggc 188  Q
    ||||||||| ||||| ||||| |||||||| ||||||||||||||    
T  20553361 tcgtcgtctaagtgcggcgttttgttgttcgtcgtcttatgcggc 20553317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 232
Target Start/End: Original strand, 21237805 - 21237845
Alignment:
Q  193 tttgatttcgcgtcttgttgcagtgtt-gtttggttcatat 232  Q
    ||||| ||||||||||||||||||||| |||||||||||||    
T  21237805 tttgacttcgcgtcttgttgcagtgttcgtttggttcatat 21237845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 124
Target Start/End: Complemental strand, 37663329 - 37663221
Alignment:
Q  17 ttatcgagaagatgtggttttatatcattttttgatctagaatcacccctctccatctatttttccc-ctttcttttgatacaaataagtgattttcaca 115  Q
    |||||||| | | ||||||||||  ||||||||||  ||||||||| | ||||||||| |||||  | |||| ||| |||  ||||||||| |||| |||    
T  37663329 ttatcgaggataagtggttttatgccattttttgacatagaatcactcatctccatctttttttatctctttatttcgatgtaaataagtggtttttaca 37663230  T
Q  116 tatatcaag 124  Q
    |||||||||    
T  37663229 tatatcaag 37663221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 208
Target Start/End: Original strand, 39657416 - 39657480
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtctt 208  Q
    ||||||||| |||||  |||||| |||||| ||||||| |||||| || ||||||||||| ||||    
T  39657416 tcgtcgtcttagtgcgacgttgtattgttcgtcgtcttgtgcggcgttgtttgatttcgcatctt 39657480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 124
Target Start/End: Complemental strand, 40211532 - 40211452
Alignment:
Q  44 ttttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||| |||||||||||||||| ||||| |||| | | |||||||  ||  ||||||| | ||||||||| |||||||    
T  40211532 ttttttgacctagaatcacccctctacatcttttttactcttttctttcaatctaaataagcggttttcacatctatcaag 40211452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 6e-18; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 30894483 - 30894573
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatat 120  Q
    ||||||||| |||||||||||| |||||||||||||||| ||||| |||||||| |||||||  ||  |||||| || |||||||||||||    
T  30894483 gtggttttagatcattttttgacctagaatcacccctctacatctgtttttcccttttctttcaatctaaataactggttttcacatatat 30894573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 12170342 - 12170436
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||||  ||||||||||| |||||||||||||||| ||||| |||| ||| |||||||  ||  ||||||||| ||||||||| |||||||    
T  12170342 gtggttttaggtcattttttgacctagaatcacccctctacatcttttttccccttttctttcaatctaaataagtggttttcacatctatcaag 12170436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 45 - 124
Target Start/End: Original strand, 31296671 - 31296750
Alignment:
Q  45 tttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||||| ||| ||||| | |||| ||||| ||||| ||| |||||| |||||||||||||||||| |||||||||||||    
T  31296671 tttttgacctataatcatctctctgcatctttttttaccccttctttcgatacaaataagtgatttacacatatatcaag 31296750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 152 - 219
Target Start/End: Original strand, 31296793 - 31296860
Alignment:
Q  152 tgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt 219  Q
    ||||||| ||||||||||||||||| |||| |||||| || |||||||| || |||||||||||||||    
T  31296793 tgagtgcggcgttgtgttgttcatcatcttgtgcggcgttgtttgattttgcatcttgttgcagtgtt 31296860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 33053411 - 33053317
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||||  ||||||||||| ||||||||| |||||| ||||| |||| ||| |||||||  ||  ||||||||| ||||||||| |||||||    
T  33053411 gtggttttaggtcattttttgacctagaatcatccctctacatcttttttccccttttctttcaatctaaataagtggttttcacatctatcaag 33053317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 606055 - 606144
Alignment:
Q  34 ttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaa 123  Q
    |||||| ||||||||||| |||| ||||||||||| ||||| |||| ||| |||||||  ||  ||||||||| ||||||||| ||||||    
T  606055 ttttatgtcattttttgacctaggatcacccctctacatcttttttccccttttctttcaatctaaataagtggttttcacatctatcaa 606144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 219
Target Start/End: Complemental strand, 30140627 - 30140575
Alignment:
Q  167 gttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt 219  Q
    ||||||||||||||| |||||||||  |||||||| |||||||||||||||||    
T  30140627 gttgttcatcgtcttgtgcggcattgcttgatttcacgtcttgttgcagtgtt 30140575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 34018409 - 34018501
Alignment:
Q  32 ggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||  ||||||||||| |||||||||||||||| ||||| |||  ||  |||||||  ||  ||||||||| |||||||||||||||||    
T  34018409 ggttttaggtcattttttgacctagaatcacccctctacatctctttacccattttctttcaatttaaataagtggttttcacatatatcaag 34018501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 124
Target Start/End: Original strand, 14801069 - 14801147
Alignment:
Q  45 tttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||||||||||||||||||||||  || | ||||||||||||||||  ||  |||||||| ||||||||||| ||||||    
T  14801069 tttttgatctagaatcacccctctgtatat-tttttcccctttctttcaatctaaataagtaattttcacatacatcaag 14801147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 26588594 - 26588508
Alignment:
Q  147 tcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt-gtttggttcatat 232  Q
    |||| ||||||| | ||||||||| |  ||||||| |||||| || ||||||||| ||||||||||| ||||| |||||||||||||    
T  26588594 tcgtttgagtgcggagttgtgttgattgtcgtcttgtgcggcgttgtttgatttcccgtcttgttgcggtgttcgtttggttcatat 26588508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 219
Target Start/End: Complemental strand, 13546785 - 13546713
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt 219  Q
    ||||||| ||||||| |||||||||||||| ||||||||||||||    |||||||| ||| ||||||| ||||||    
T  13546785 tcgtcgtttgagtgcggcgttgtgttgttcgtcgtcttatgcggc---gtttgattttgcgccttgttgtagtgtt 13546713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 29320105 - 29320049
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttccccttt 87  Q
    |||||||||  |||| ||||||||||||||||||||||| ||||| ||||||||||||    
T  29320105 gtggttttaggtcatattttgatctagaatcacccctctacatct-tttttccccttt 29320049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 120
Target Start/End: Original strand, 34222649 - 34222731
Alignment:
Q  36 ttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatat 120  Q
    |||| ||||||||| | |||||||||||||||| ||||  |||||||||||||||| |||  ||||||||| |||  ||||||||    
T  34222649 ttatgtcattttttaacctagaatcacccctctacatc--tttttcccctttctttcgatctaaataagtggtttcaacatatat 34222731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 208
Target Start/End: Original strand, 8102687 - 8102751
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtctt 208  Q
    ||||||||| |||||| ||||||||| ||| ||||||| |||||| || ||||||||||| ||||    
T  8102687 tcgtcgtcttagtgcaacgttgtgtttttcgtcgtcttgtgcggcgttgtttgatttcgcatctt 8102751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 124
Target Start/End: Original strand, 14801645 - 14801761
Alignment:
Q  9 tctttcacttatcgagaagatgtggttttatatcattttttgatctagaatcacccctctccat-ctatttttcccctttcttttgatacaaataagtga 107  Q
    ||||||||| |||||||||  ||| |||||  ||| ||||||| ||||||| |||||||| ||| || ||||| ||| || |||| ||  ||||||| ||    
T  14801645 tctttcactcatcgagaaggggtgattttaggtcaatttttgacctagaataacccctctgcattcttttttttcccctttttttaattaaaataaggga 14801744  T
Q  108 ttttcacatatatcaag 124  Q
    |||||||||| ||||||    
T  14801745 ttttcacatacatcaag 14801761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 124
Target Start/End: Original strand, 22571351 - 22571429
Alignment:
Q  44 ttttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||| ||||||||||| || ||| ||||| ||||||| ||| ||||||||  ||||||||||||| |||||||||||||    
T  22571351 tttttttatctagaatcaaccatctgcatct-tttttcctctt-cttttgatctaaataagtgatttccacatatatcaag 22571429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 1933801 - 1933726
Alignment:
Q  160 gcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtg-ttgtttggttcatatca 234  Q
    ||||||||||| |  ||||||| ||||||||| |||||||| | |||| ||||| ||| |||||||||||||||||    
T  1933801 gcgttgtgttgctagtcgtcttgtgcggcattgtttgattttgtgtctggttgcggtgtttgtttggttcatatca 1933726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 3913817 - 3913723
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctt-tcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||||  ||||||||||| |||||||||||||||  ||||| |||||||| || |||||  ||  ||||||||| ||||||||| |||||||    
T  3913817 gtggttttaggtcattttttgacctagaatcacccctccgcatct-tttttcccattctctttcaatctaaataagtggttttcacatctatcaag 3913723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 29319998 - 29319928
Alignment:
Q  146 gtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt 219  Q
    ||||||| ||||| |||||||||||||| || |||||||||||    |||||||||||||||||| || |||||    
T  29319998 gtcgtctaagtgcggcgttgtgttgttcgtcctcttatgcggc---gtttgatttcgcgtcttgtcgcggtgtt 29319928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 115
Target Start/End: Original strand, 20220760 - 20220839
Alignment:
Q  34 ttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcaca 115  Q
    |||||| |||||||||||| | ||||||||| ||| ||||  |||||||||||||||| |||  |||||||||  |||||||    
T  20220760 ttttatgtcattttttgatatggaatcacccatctgcatc--tttttcccctttctttcgatttaaataagtggctttcaca 20220839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 115
Target Start/End: Original strand, 22114744 - 22114823
Alignment:
Q  34 ttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcaca 115  Q
    |||||| |||||||||||| | ||||||||| ||| ||||  |||||||||||||||| |||  |||||||||  |||||||    
T  22114744 ttttatgtcattttttgatatggaatcacccatctgcatc--tttttcccctttctttcgatttaaataagtggctttcaca 22114823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 28981145 - 28981231
Alignment:
Q  147 tcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt-gtttggttcatat 232  Q
    |||||||||| | |||||||||||||| ||||||| |||||  || |||||||| |  ||||||||  ||||| |||||||||||||    
T  28981145 tcgtctgagtacggcgttgtgttgttcgtcgtcttctgcggtgttgtttgattttgtatcttgttgtggtgttcgtttggttcatat 28981231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 30493500 - 30493586
Alignment:
Q  147 tcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt-gtttggttcatat 232  Q
    |||||||||||| | |||||||||||| ||||||| ||| || || ||||||||||  |||||||   ||||| |||||||||||||    
T  30493500 tcgtctgagtgcggtgttgtgttgttcgtcgtcttgtgcagcgttgtttgatttcgtatcttgttctggtgttcgtttggttcatat 30493586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 32191975 - 32191881
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||||  || |||||||||||| |||||||| ||| ||||| |||  ||| ||| ||| |||  |||||||||||||  ||||||||||||    
T  32191975 gtggttttaggtccttttttgatctacaatcacccttctgcatctttttcccccttttatttcgatctaaataagtgatttctacatatatcaag 32191881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 127638 - 127675
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtctt 181  Q
    ||||||||| |||||||||||||||||||| |||||||    
T  127638 tcgtcgtctaagtgcagcgttgtgttgttcgtcgtctt 127675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 1523369 - 1523426
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttc 201  Q
    ||||||||| |||||  ||||||||||||| ||||||| |||| |||| |||||||||    
T  1523369 tcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcgacattgtttgatttc 1523426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 232
Target Start/End: Complemental strand, 7976302 - 7976213
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt-gtttggttcatat 232  Q
    |||||||||||||||   |||||||||||| ||||||| |||||| || ||| |||  |||||||||||  ||||| |||| ||||||||    
T  7976302 tcgtcgtctgagtgcgttgttgtgttgttcgtcgtcttgtgcggcgttttttaattatgcgtcttgttgtggtgttcgtttagttcatat 7976213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 219
Target Start/End: Complemental strand, 33053290 - 33053218
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt 219  Q
    ||||||||| ||||| |||||||||||||| ||||||| ||||||    ||||||||||||| |||| || |||||    
T  33053290 tcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgttttgtcgcggtgtt 33053218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 124
Target Start/End: Complemental strand, 68229 - 68150
Alignment:
Q  45 tttttgatctagaatca-cccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||||| ||||||||| ||||||| ||||| |||| ||| |||||||| ||  ||||||||| ||||||||| |||||||    
T  68229 tttttgacctagaatcaccccctctacatct-ttttccccttttcttttaatctaaataagtggttttcacatctatcaag 68150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 124
Target Start/End: Original strand, 8102580 - 8102660
Alignment:
Q  45 tttttgatctagaatcacccctctccatctatttttcc-cctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||||| |||||||||||||||| ||| | ||||| | |||||||||  ||  |||||||||||||||||| | ||||||    
T  8102580 tttttgacctagaatcacccctctgcatattttttttctcctttctttcaatctaaataagtgattttcacaaacatcaag 8102660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 32327334 - 32327267
Alignment:
Q  149 gtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt 219  Q
    |||| ||||| |||||||||||||| ||||||| ||||||    |||||||||||||||||| || |||||    
T  32327334 gtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgtcttgtcgcggtgtt 32327267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 2e-17; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 154 - 219
Target Start/End: Original strand, 19120886 - 19120951
Alignment:
Q  154 agtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt 219  Q
    ||||| |||||||||||||| |||||||||| |||||| ||||||||||||||||||||| |||||    
T  19120886 agtgcggcgttgtgttgttcgtcgtcttatgaggcattgtttgatttcgcgtcttgttgcggtgtt 19120951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 161 - 232
Target Start/End: Complemental strand, 10332656 - 10332584
Alignment:
Q  161 cgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtg-ttgtttggttcatat 232  Q
    ||||||||||||  ||||||| ||||||||| ||||||||||||||||||||||||| ||||||| |||||||    
T  10332656 cgttgtgttgtttgtcgtcttgtgcggcattgtttgatttcgcgtcttgttgcagtgtttgtttgattcatat 10332584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 124
Target Start/End: Complemental strand, 2979576 - 2979462
Alignment:
Q  9 tctttcacttatcgagaagatgtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgat 108  Q
    ||||||||| |||||| ||  ||| |||||  ||| ||||||| ||| |||||||||||| ||||| ||||||| ||||||||  ||  |||||||||||    
T  2979576 tctttcactcatcgaggaggggtgattttaggtcaatttttgacctataatcacccctctgcatct-tttttcctctttctttcaatctaaataagtgat 2979478  T
Q  109 tttcacatatatcaag 124  Q
    ||||||||| ||||||    
T  2979477 tttcacatacatcaag 2979462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 124
Target Start/End: Original strand, 39567120 - 39567234
Alignment:
Q  9 tctttcacttatcgagaagatgtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgat 108  Q
    ||||||||| |||||| ||  ||| |||||  ||| ||||||| |||||||||| ||||| ||||| |||| |||||||||||  ||  |||||||||||    
T  39567120 tctttcactcatcgaggaggggtgattttaggtcaatttttgacctagaatcacgcctctgcatct-ttttccccctttctttcaatctaaataagtgat 39567218  T
Q  109 tttcacatatatcaag 124  Q
    ||||||||| ||||||    
T  39567219 tttcacatacatcaag 39567234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 6012381 - 6012287
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||||  |||||||||||  ||||||||||||||| ||||| |||||||| |||||||  ||  ||||||||| ||||||| | |||||||    
T  6012381 gtggttttaggtcattttttgacatagaatcacccctctacatctttttttcccttttctttcaatctaaataagtgtttttcacgtctatcaag 6012287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 120
Target Start/End: Original strand, 31314631 - 31314692
Alignment:
Q  56 gaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatat 120  Q
    ||||||||||||| |||   ||||||||||||||||||||| ||||||||||||| |||||||||    
T  31314631 gaatcacccctctacat---tttttcccctttcttttgatataaataagtgatttccacatatat 31314692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 38597643 - 38597736
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||||  | ||||||||| |||||||||||||||| ||||| ||||||||  ||||||  ||  ||||||||||||||||||| |||||||    
T  38597643 gtggttttaggttattttttgacctagaatcacccctctacatct-tttttccctattctttcaatttaaataagtgattttcacatctatcaag 38597736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 232
Target Start/End: Complemental strand, 8088317 - 8088248
Alignment:
Q  163 ttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgttgtttggttcatat 232  Q
    |||||||||| |||||||| |||||| || |||||||| || |||||||||||||||  |||||||||||    
T  8088317 ttgtgttgtttatcgtcttgtgcggcgttgtttgatttggcatcttgttgcagtgttcgttggttcatat 8088248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 13007063 - 13007168
Alignment:
Q  19 atcgagaagatgtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatat 118  Q
    |||||| ||| |||||||||  ||||||||||| |||||||||||||||| || || |||| ||  |||||||  ||  ||||||||| ||||||||| |    
T  13007063 atcgaggagaggtggttttaggtcattttttgacctagaatcacccctctacaccttttttcccattttctttcaatctaaataagtggttttcacatct 13007162  T
Q  119 atcaag 124  Q
    ||||||    
T  13007163 atcaag 13007168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 19103691 - 19103623
Alignment:
Q  55 agaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||||||||  ||||| |||||||||||||||| |||  |||||||||||||||||||| ||||||    
T  19103691 agaatcacccctcagcatct-tttttcccctttctttcgatctaaataagtgattttcacatacatcaag 19103623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 124
Target Start/End: Complemental strand, 26878332 - 26878228
Alignment:
Q  19 atcgagaagatgtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatat 118  Q
    |||||| ||| |||||||||| |||||||| |||||||||||||| |||| ||||| |||  ||| |||||||  ||  ||||||||| ||||||||||     
T  26878332 atcgaggagaggtggttttatgtcattttt-gatctagaatcacctctctacatctttttcccccttttctttcaatctaaataagtggttttcacataa 26878234  T
Q  119 atcaag 124  Q
    ||||||    
T  26878233 atcaag 26878228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 31364395 - 31364440
Alignment:
Q  75 atttttcccctttcttttgatacaaataagtgattttcacatatat 120  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||    
T  31364395 atttttcccctttcttttgatataaataagtgatttccacatatat 31364440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 34945268 - 34945361
Alignment:
Q  31 tggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||||||  ||||||||||| |||||||||||| ||| ||||| |||| ||| |||||||  ||  ||||||||| ||||||||| |||||||    
T  34945268 tggttttaggtcattttttgacctagaatcacccttctacatcttttttccccttttctttcaatctaaataagtggttttcacatctatcaag 34945361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 124
Target Start/End: Complemental strand, 9113957 - 9113874
Alignment:
Q  41 tcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||||||| | |||||||||||||||| ||||| |||| ||  |||||||| ||  ||||||||| ||||||||| |||||||    
T  9113957 tcattttttaacctagaatcacccctctacatcttttttcccattttcttttaatctaaataagtggttttcacatctatcaag 9113874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 203
Target Start/End: Original strand, 14211093 - 14211245
Alignment:
Q  45 tttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaagnnnnnnnnncatgatttcgt 144  Q
    ||||||| |||||||||||||||| ||||| |||   ||||||||||  ||  |||||||||||||||||||| ||||||         | |||||   |    
T  14211093 tttttgacctagaatcacccctctgcatcttttt---ccctttctttcaatctaaataagtgattttcacatacatcaagtttttatttcgtgatt---t 14211186  T
Q  145 cgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgc 203  Q
    |||||||| |||||  | ||||||||||| ||||||| |||||| || |||||||||||    
T  14211187 cgtcgtcttagtgcgacattgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgc 14211245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 38007203 - 38007295
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||||  ||||||||||| || ||||||||||||| ||||  |||||||| |||||||  ||  ||||||||| |||||||| ||||||||    
T  38007203 gtggttttaggtcattttttgacctcgaatcacccctctacatc--tttttcccttttctttcaatttaaataagtggttttcacacatatcaag 38007295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 19349679 - 19349745
Alignment:
Q  163 ttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt-gtttggttc 228  Q
    ||||||||||| ||||||| |||||| |||||||||||| ||||| |||||| |||| |||||||||    
T  19349679 ttgtgttgttcgtcgtcttgtgcggcgttatttgatttcacgtctagttgcaatgttcgtttggttc 19349745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 219
Target Start/End: Complemental strand, 31391875 - 31391803
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt 219  Q
    ||||||||| |||||  ||||||||||||| ||||||| ||||||   |||||||||||| |||||| ||||||||    
T  31391875 tcgtcgtctaagtgcgacgttgtgttgttcttcgtcttgtgcggc---atttgatttcgcatcttgtcgcagtgtt 31391803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 31392000 - 31391943
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttccccttt 87  Q
    |||||||||  ||||||||||| |||||||||||||||| ||||| ||| ||||||||    
T  31392000 gtggttttaggtcattttttgacctagaatcacccctctacatctttttctccccttt 31391943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 38597763 - 38597826
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgt 210  Q
    ||||||||| ||||| |||||||||||||| ||||||| ||||||    ||||||||||||||||||    
T  38597763 tcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgtcttgt 38597826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 124
Target Start/End: Complemental strand, 8096725 - 8096647
Alignment:
Q  45 tttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||||| ||||||||||||||||   ||| |||||||| |||||||  ||  ||||||||| |||||||||||||||||    
T  8096725 tttttgacctagaatcacccctctatttct-tttttcccttttctttcaatctaaataagtggttttcacatatatcaag 8096647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 16758521 - 16758592
Alignment:
Q  162 gttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt-gtttggttcatat 232  Q
    ||||||||||| |||||| | |||||  |||||||||||||||| ||||| | ||||| |||||||||||||    
T  16758521 gttgtgttgtttatcgtcgtgtgcggtcttatttgatttcgcgttttgttacggtgttcgtttggttcatat 16758592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 219
Target Start/End: Complemental strand, 35921121 - 35921046
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt 219  Q
    |||||||||||||||  | || | |||||| |||||||||| | | || ||||||||||||||||||||| |||||    
T  35921121 tcgtcgtctgagtgcgacattatattgttcgtcgtcttatgagacgttgtttgatttcgcgtcttgttgcggtgtt 35921046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 37986227 - 37986169
Alignment:
Q  152 tgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgc 213  Q
    ||||||| |||||||||||||||||||||| ||||||    ||||||||||| |||||||||    
T  37986227 tgagtgcggcgttgtgttgttcatcgtcttgtgcggc---gtttgatttcgcatcttgttgc 37986169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 228
Target Start/End: Complemental strand, 38111063 - 38110988
Alignment:
Q  154 agtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtg-ttgtttggttc 228  Q
    ||||||| |||||||||||  | ||||| |||||| || |||||||| | |||||||||||||| |||||||||||    
T  38111063 agtgcagtgttgtgttgtttgttgtcttgtgcggcgttgtttgattttgtgtcttgttgcagtgtttgtttggttc 38110988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 42886484 - 42886539
Alignment:
Q  164 tgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt 219  Q
    |||||||||| ||||||| |||||| || ||||||||| || ||||||||||||||    
T  42886484 tgtgttgttcgtcgtcttgtgcggcgttgtttgatttcccgccttgttgcagtgtt 42886539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 7036073 - 7036166
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaa 123  Q
    |||||||||  ||||||||||| ||| |||||| | ||| ||||| |||| | | |||||||  ||  ||||||||| ||||||||||||||||    
T  7036073 gtggttttaggtcattttttgacctaaaatcactcatctacatcttttttcctcttttctttcaatctaaataagtggttttcacatatatcaa 7036166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 219
Target Start/End: Complemental strand, 11074022 - 11073950
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt 219  Q
    |||| |||| ||||||||||||| |||||| ||||||| ||||||    |||||||||||||||||| || |||||    
T  11074022 tcgttgtctaagtgcagcgttgttttgttcgtcgtcttgtgcggc---gtttgatttcgcgtcttgtcgcggtgtt 11073950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 26510765 - 26510696
Alignment:
Q  147 tcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagt 216  Q
    |||||| |||| ||||||||||| ||| || |||| |||| | || |||||||| |||||||||||||||    
T  26510765 tcgtctaagtgtagcgttgtgttattcgtcatcttgtgcgtcgttgtttgattttgcgtcttgttgcagt 26510696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 13007195 - 13007239
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggc 188  Q
    ||||||||| ||||| |||||||||||||| ||||||| ||||||    
T  13007195 tcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggc 13007239  T

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Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 28541032 - 28540976
Alignment:
Q  147 tcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgc 203  Q
    |||||| |||||  ||||||||||||| ||||||| |||||| || |||||||||||    
T  28541032 tcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgc 28540976  T

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Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 124
Target Start/End: Complemental strand, 28541110 - 28541062
Alignment:
Q  76 tttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||||||||||||||  ||  |||||||||||||||||||| ||||||    
T  28541110 tttttcccctttctttcaatctaaataagtgattttcacatacatcaag 28541062  T

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Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 41749308 - 41749364
Alignment:
Q  163 ttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt 219  Q
    ||||||||||   |||||||||| ||||| ||||||||| | |||||||||||||||    
T  41749308 ttgtgttgttatccgtcttatgcagcattgtttgatttcacatcttgttgcagtgtt 41749364  T

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Target: scaffold0888 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 124
Target Start/End: Complemental strand, 1938 - 1824
Alignment:
Q  9 tctttcacttatcgagaagatgtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgat 108  Q
    |||||||||||||||| ||  ||| | |||  ||| ||||||| ||||||||||| |||| ||||| ||||||||||||||||  ||  |||||||||||    
T  1938 tctttcacttatcgaggaggggtgatattaggtcaatttttgacctagaatcacctctctgcatct-tttttcccctttctttcaatctaaataagtgat 1840  T
Q  109 tttcacatatatcaag 124  Q
    ||||||||| ||||||    
T  1839 tttcacatacatcaag 1824  T

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Target: scaffold0445 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 1179 - 1283
Alignment:
Q  19 atcgagaagatgtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatat 118  Q
    |||||| ||| |||||||||  ||||||||||| |||||||||||||||| | ||| |||||||| |||||||   |  ||||||||| |||||||||||    
T  1179 atcgaggagaggtggttttaggtcattttttgacctagaatcacccctctacttct-tttttcccttttctttcactctaaataagtggttttcacatat 1277  T
Q  119 atcaag 124  Q
    ||||||    
T  1278 atcaag 1283  T

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Target: scaffold0445; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 219
Target Start/End: Original strand, 1314 - 1383
Alignment:
Q  147 tcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt 219  Q
    |||||| ||||| |||||||||||||| ||||||| || |||    ||||||||||||||||||||| |||||    
T  1314 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgtggc---gtttgatttcgcgtcttgttgcggtgtt 1383  T

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Target: scaffold0347 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 232
Target Start/End: Original strand, 5994 - 6083
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt-gtttggttcatat 232  Q
    ||||||||||||||||  | |||||||||| ||||||| |||||| || ||||||||||||| ||||||| |||||  ||||||||||||    
T  5994 tcgtcgtctgagtgcaatgatgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcgtattgttgcggtgttcatttggttcatat 6083  T

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Target: scaffold0009 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 124
Target Start/End: Complemental strand, 58346 - 58229
Alignment:
Q  6 ttttctttcacttatcgagaagatgtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagt 105  Q
    ||||||||||||  ||||| ||  |||||||||  ||||||||||| ||| |||||||||||| ||||  ||||| || |||||||  ||  ||||||||    
T  58346 ttttctttcactcgtcgaggaggggtggttttaggtcattttttgacctaaaatcacccctctgcatc-cttttttccttttctttcaatctaaataagt 58248  T
Q  106 gattttcacatatatcaag 124  Q
    ||||| |||||||||||||    
T  58247 gatttccacatatatcaag 58229  T

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Target: scaffold0884 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 2215 - 2159
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttccccttt 87  Q
    |||||||||  |||||||||||||||||||||||||||| ||||| ||||||||||||    
T  2215 gtggttttaagtcattttttgatctagaatcacccctctacatct-tttttccccttt 2159  T

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Target: scaffold0017 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 124
Target Start/End: Complemental strand, 33004 - 32897
Alignment:
Q  17 ttatcgagaagatgtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacat 116  Q
    |||||||| ||  |||||||||  |||||||||||  ||||||||||||||| ||||| || | ||| |||||||  ||  ||||||||| |||||||||    
T  33004 ttatcgaggaggagtggttttaggtcattttttgacatagaatcacccctctacatcttttgtccccttttctttcaatctaaataagtggttttcacat 32905  T
Q  117 atatcaag 124  Q
     |||||||    
T  32904 ctatcaag 32897  T

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Target: scaffold0017; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 210
Target Start/End: Complemental strand, 32869 - 32806
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgt 210  Q
    ||||||||| ||||| ||||| |||||||| ||||||| |||||| ||   ||||||||||||||||    
T  32869 tcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttgt 32806  T

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Target: scaffold0603 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 7564 - 7655
Alignment:
Q  31 tggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    ||||||||  ||||||||||| |||||||||| | ||| |||||  ||| |||||||||||  ||  ||||||||| |||||||||||||||||    
T  7564 tggttttaggtcattttttgacctagaatcactcatctgcatct--tttacccctttctttcaatttaaataagtggttttcacatatatcaag 7655  T

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Target: scaffold0039 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 232
Target Start/End: Original strand, 93070 - 93160
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgat-ttcgcgtcttgttgcagtgtt-gtttggttcatat 232  Q
    ||||||||||||||| |||||||||||||  | ||||| |||||| || |||||| |||| |||||||||  ||||| |||||||||||||    
T  93070 tcgtcgtctgagtgctgcgttgtgttgtttgttgtcttgtgcggcgttgtttgatattcgtgtcttgttgtggtgttcgtttggttcatat 93160  T

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Target: scaffold0026 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 72107 - 72013
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttcacatatatcaag 124  Q
    |||||||||  ||||||||||| |||||||||||  ||| ||||| |||  ||| |||||||  || |||||||||| ||||||||| |||||||    
T  72107 gtggttttaggtcattttttgacctagaatcaccattcttcatctttttcccccttttctttcaatccaaataagtggttttcacatctatcaag 72013  T

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Target: scaffold0127 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 113
Target Start/End: Original strand, 15338 - 15420
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatctatttttcccctttcttttgatacaaataagtgattttca 113  Q
    |||||||||  ||||||||||| |||||||||||||||| ||||| |||| ||| |||||||  ||  ||||||||| ||||||    
T  15338 gtggttttaggtcattttttgacctagaatcacccctctacatct-ttttccccttttctttcaatctaaataagtggttttca 15420  T

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Target: scaffold0127; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 219
Target Start/End: Original strand, 15458 - 15531
Alignment:
Q  144 tcgtcgtctgagtgcagcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt 219  Q
    ||||| ||| ||||| | |||||||||||| ||||||| |||||| |  |||||||||||||||||| || |||||    
T  15458 tcgtcatctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgt--tttgatttcgcgtcttgtcgcggtgtt 15531  T

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Target: scaffold0087 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 25572 - 25528
Alignment:
Q  30 gtggttttatatcattttttgatctagaatcacccctctccatct 74  Q
    |||||||||| ||||||||||| ||| |||||||||||| |||||    
T  25572 gtggttttatgtcattttttgacctataatcacccctctacatct 25528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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