View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5718-Insertion-1 (Length: 1083)
Name: NF5718-Insertion-1
Description: NF5718
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5718-Insertion-1 |
 |  |
|
| [»] scaffold0653 (2 HSPs) |
 |  |  |
|
| [»] scaffold0002 (1 HSPs) |
 |  |  |
|
| [»] scaffold0300 (2 HSPs) |
 |  |  |
|
| [»] scaffold0041 (1 HSPs) |
 |  |  |
|
| [»] scaffold0520 (1 HSPs) |
 |  |  |
|
| [»] scaffold0711 (1 HSPs) |
 |  |  |
|
| [»] scaffold0053 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr7 (Bit Score: 393; Significance: 0; HSPs: 24)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 393; E-Value: 0
Query Start/End: Original strand, 426 - 926
Target Start/End: Original strand, 9263399 - 9263905
Alignment:
| Q |
426 |
ctttcttcttcttcctcatgggtgattcttcttgatcaaataagtctgcaagatgaattgtgtttaacttgtaaagtttaagaaactaa---ttgaaaaa |
522 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |
|
|
| T |
9263399 |
ctttcttcttcttcctcatgggtgattcttcttgatcaaataagtctgcaagatgaattgtggttaacttgtaaagtttaagaaactaaaaattgaaaaa |
9263498 |
T |
 |
| Q |
523 |
cagaatatgacttggcactccccaatgcagcttcgatgcaaaaacttgtcgctcctttcagcaactctaccgcaatgctccgatgaagcgagcggtagca |
622 |
Q |
| |
|
||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |
|
|
| T |
9263499 |
cagaatatgacttggcacttaccaatgcagctccgatgcaaaaacttgtcgctcctttcagcaactctaccgcaatgctccgacgaagcgagcggtagaa |
9263598 |
T |
 |
| Q |
623 |
tccctggatgctttccaccgtgagaggagttgtggttggaggagctggtggtggttgctgtcccacaacaatatgaatttcattgttcaatgatgccatc |
722 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
9263599 |
tccctggatgctttccaccgtgagaggagttgtggttggaggagctgctggtggtggctgttccacaacaatctgaatttcattgttcaatgatgccatc |
9263698 |
T |
 |
| Q |
723 |
ttgctcagtttctctgtgga-atttttgttgttgttgaaggaaatggaactgaagtgcagtgcttgcaatgcaagtgtttttgtttccaaattgagagtt |
821 |
Q |
| |
|
||||| ||||||||||| || ||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
9263699 |
ttgcttagtttctctgttgattttttttttgttgttaaaggaaatggaactgaagtgcagtgcgtgcaatgcaagtgtttttgtttccaaattgagagtc |
9263798 |
T |
 |
| Q |
822 |
tatttatacggtgctcctaatgatgtaagcaaagcgcgtgttagcctctttggatg-aatc-aacattgatggaagagatactcataaccttgaaaccta |
919 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9263799 |
tatttatatagtgctcctaatgatgtaagcaaagcgcgtgttagcctctttggatgaaatcaaacattgatggaagagatactcataaccttgaaaccta |
9263898 |
T |
 |
| Q |
920 |
tgaaaca |
926 |
Q |
| |
|
||||||| |
|
|
| T |
9263899 |
tgaaaca |
9263905 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 381; E-Value: 0
Query Start/End: Original strand, 426 - 926
Target Start/End: Original strand, 9267678 - 9268184
Alignment:
| Q |
426 |
ctttcttcttcttcctcatgggtgattcttcttgatcaaataagtctgcaagatgaattgtgt-ttaacttgtaaagtttaagaaactaa---ttgaaaa |
521 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |
|
|
| T |
9267678 |
ctttcttctacttcctcatgggtgattcttcttgatcaaataagtctgcaagatgaattgtgagttaacttgtaaagtttaagaaactaaaaattgaaaa |
9267777 |
T |
 |
| Q |
522 |
acagaatatgacttggcactccccaatgcagcttcgatgcaaaaacttgtcgctcctttcagcaactctaccgcaatgctccgatgaagcgagcggtagc |
621 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||| |
|
|
| T |
9267778 |
acagaatatgacttggcactcaccaatgcagctccgatgcaaaaacttgtcgctcctttcagcaactctcccccaatgctccgacgaagcgagcggtagc |
9267877 |
T |
 |
| Q |
622 |
atccctggatgctttccaccgtgagaggagttgtggttggaggagctggtggtggttgctgtcccacaacaatatgaatttcattgttcaatgatgccat |
721 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
9267878 |
atccctggatgctttccaccgtgacaggagttgtggttggaggagctggtggtggttgctgttccacaacaacatgaatttcattgttcaatgatgccat |
9267977 |
T |
 |
| Q |
722 |
cttgctcagtttctctgtggaatttttgttgttgttgaaggaaatggaactgaagtgcagtgcttgcaatgcaagtgtttttgtttccaaattgagagtt |
821 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
9267978 |
cttgctcagtttctctgttgaatttttgttgttgttgaaggaaatggaactgaagtgctgtgcgtgcaaagcaagtgtttttgtttccaaattgagagtc |
9268077 |
T |
 |
| Q |
822 |
tatttatacggtgctcctaatgatgtaagcaaagcgcgtgttagcctctttggatg-aatc-aacattgatggaagagatactcataaccttgaaaccta |
919 |
Q |
| |
|
||||| || ||||||||||||||||||||||||||| | || |||||||||||||| |||| |||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
9268078 |
tatttgtagggtgctcctaatgatgtaagcaaagcgtgcgtgagcctctttggatgaaatcaaacactgatggaagagatactcttaaccttgaaaccta |
9268177 |
T |
 |
| Q |
920 |
tgaaaca |
926 |
Q |
| |
|
||||||| |
|
|
| T |
9268178 |
tgaaaca |
9268184 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 431 - 862
Target Start/End: Complemental strand, 9263221 - 9262786
Alignment:
| Q |
431 |
ttcttcttcctcatgggtgattcttcttgatcaaataagtctgcaagatgaattgtgt-ttaacttgtaaagtttaagaaactaa---ttgaaaaacaga |
526 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||| |
|
|
| T |
9263221 |
ttcttcttcctcatgggtgattcttcttgatcaaataagtctgcaagatgaattgtgagttaacttgtaaagtttaagaaactaaaaattaaaaaacaga |
9263122 |
T |
 |
| Q |
527 |
atatgacttggcactccccaatgcagcttcgatgcaaaaacttgtcgctcctttcagcaactctaccgcaatgctccgatgaagcgagcggtagcatccc |
626 |
Q |
| |
|
|||||| ||||||||| |||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
9263121 |
atatgaattggcactcaccaatgtagctcggatgaaaaaacttgtcgctcctttcagcaactctaccgcaatgctccgacaaagcgagcggtagcatccc |
9263022 |
T |
 |
| Q |
627 |
tggatgctttccaccgtgagaggagttgtggttggaggagctggtggtggttgctgtcccacaacaatatgaatttcattgttcaatgatgccatcttgc |
726 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||||||||||| | ||||| ||||| |||||||||| |||||||||||||||||||||| |||||||| |
|
|
| T |
9263021 |
tggattcttttcaccgtgagaggagttgtggttggaggagctgctagtggtggctgttccacaacaatctgaatttcattgttcaatgatgtcatcttgc |
9262922 |
T |
 |
| Q |
727 |
tcagtttctctgtggaatttttgttgttgttgaaggaaatggaactgaagtgcagtgcttgcaatgcaagtgtttttgtttccaaattgagagtttattt |
826 |
Q |
| |
|
||| ||||||||| |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
9262921 |
tcaatttctctgttgaattttttttgttgttaaaggaaatggaactgaagtgcagtgcgtgcaatgcaagtgtttttgtttccaaattgagagtctattt |
9262822 |
T |
 |
| Q |
827 |
atacggtgctcctaatgatgtaagcaaagcgcgtgt |
862 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||| |
|
|
| T |
9262821 |
atatagtgctcctaatgatgtaagcaaagcgcgtgt |
9262786 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 227; E-Value: 1e-124
Query Start/End: Original strand, 557 - 862
Target Start/End: Complemental strand, 9267625 - 9267319
Alignment:
| Q |
557 |
gatgcaaaaacttgtcgctcctttcagcaactctaccgcaatgctccgatgaagcgagcggtagcatccctggatgctttccaccgtgagaggagttgtg |
656 |
Q |
| |
|
||||||||||||||||||||||||||| |||||| |||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
9267625 |
gatgcaaaaacttgtcgctcctttcagtaactcttccgcaatgcttcgactaagcgagcggtagcatccctggatgctttccaccttgagaggagttgtg |
9267526 |
T |
 |
| Q |
657 |
gttggaggagctggtggtggttgctgtcccacaacaatatgaatttcattgttcaatgatgccatcttgctcagtttctctgtgga-atttttgttgttg |
755 |
Q |
| |
|
||||||||||||| ||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||| |
|
|
| T |
9267525 |
gttggaggagctgctggtggtggctgttccacaacaatctgaatttcattgttcaatgatgccatcttgctcagtttctctgttgattttttttttgttg |
9267426 |
T |
 |
| Q |
756 |
ttgaaggaaatggaactgaagtgcagtgcttgcaatgcaagtgtttttgtttccaaattgagagtttatttatacggtgctcctaatgatgtaagcaaag |
855 |
Q |
| |
|
|| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |
|
|
| T |
9267425 |
ttaaaggaaatggaactgaagtgcagtgcgtgcaatgcaagtgtttttgtttccaaattgagagtctatttatatagtgctcctaatgatgtaagcaaag |
9267326 |
T |
 |
| Q |
856 |
cgcgtgt |
862 |
Q |
| |
|
||||||| |
|
|
| T |
9267325 |
cgcgtgt |
9267319 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 99; E-Value: 3e-48
Query Start/End: Original strand, 235 - 389
Target Start/End: Original strand, 9244898 - 9245052
Alignment:
| Q |
235 |
tggttggagccttctagggtggcttctaaatatgttagggcatgtattcttttcttctctgatggattgtttgtcggaacaagagtggttcatacaattc |
334 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||| ||| | ||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||| |
|
|
| T |
9244898 |
tggttggagccttctacggtggcttctaaatatgtcggggtaggtattattttcttctctgatggattgtttttcggaacaagagttgttcatacaattc |
9244997 |
T |
 |
| Q |
335 |
atctaggcttttcatgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
||||||| |||| ||||||||||| |||||||||| |||||||||| || ||||| |
|
|
| T |
9244998 |
atctaggattttgatgataacaaactattgaagaataattggaatattagcatat |
9245052 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 244 - 389
Target Start/End: Original strand, 9260930 - 9261075
Alignment:
| Q |
244 |
ccttctagggtggcttctaaatatgttagggcatgtattcttttcttctctgatggattgtttgtcggaacaagagtggttcatacaattcatctaggct |
343 |
Q |
| |
|
||||||| |||||||||||||||||| ||| | ||||| ||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||| | |
|
|
| T |
9260930 |
ccttctacggtggcttctaaatatgtcggggtaggtattattttcttctctgatggattgtttttcggaacaacagttgttcatacaattcatctaggat |
9261029 |
T |
 |
| Q |
344 |
tttcatgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
||| |||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
9261030 |
tttgatgataacaaagtattgaagaataattggaatactaacatat |
9261075 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 8 - 113
Target Start/End: Original strand, 9244713 - 9244818
Alignment:
| Q |
8 |
aaagttatcagtctttctcatataaacaacaactttggatatggcttatttgtttagaatcaaacctattacgttggatcactggttttcacggtctaac |
107 |
Q |
| |
|
|||||||| ||||||| ||| | |||||||||||||||||||||||||||||||||||||| || || || |||| ||| |||||| ||||||||||| |
|
|
| T |
9244713 |
aaagttatgagtctttttcacttgaacaacaactttggatatggcttatttgtttagaatcagacatactaaattgggtcattggtttgcacggtctaac |
9244812 |
T |
 |
| Q |
108 |
atgcct |
113 |
Q |
| |
|
| |||| |
|
|
| T |
9244813 |
aagcct |
9244818 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 310 - 389
Target Start/End: Original strand, 19142365 - 19142444
Alignment:
| Q |
310 |
ggaacaagagtggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
||||||||| ||||||| | ||||| |||||| |||| |||||||||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
19142365 |
ggaacaagaatggttcaaataattcctctaggattttgatgataacaaagtattaaagaacaattgaaatactaacatat |
19142444 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 310 - 389
Target Start/End: Original strand, 20741764 - 20741843
Alignment:
| Q |
310 |
ggaacaagagtggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
||||||||| ||||||| | ||||| |||||| |||| |||||||||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
20741764 |
ggaacaagaatggttcaaataattcctctaggattttgatgataacaaagtattaaagaacaattgaaatactaacatat |
20741843 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 32 - 114
Target Start/End: Original strand, 9248953 - 9249035
Alignment:
| Q |
32 |
aacaacaactttggatatggcttatttgtttagaatcaaacctattacgttggatcactggttttcacggtctaacatgcctc |
114 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||| || |||| ||| || ||| |||||||||||| ||||| |
|
|
| T |
9248953 |
aacaccaactttggatatggcttatttgtttagaatcaaacctactaaattgggtcattgttttgcacggtctaacaagcctc |
9249035 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 343 - 389
Target Start/End: Complemental strand, 20053678 - 20053632
Alignment:
| Q |
343 |
ttttcatgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20053678 |
ttttgatgataacaaagtattgaagaacaattggaatactaacatat |
20053632 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 312 - 389
Target Start/End: Original strand, 232224 - 232300
Alignment:
| Q |
312 |
aacaagagtggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
||||||| |||||||||||| || | || | |||| ||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
232224 |
aacaagaatggttcatacaagtc-tataaggttttgatgataacaaaatattgaagaacaattggaatactaacatat |
232300 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 349 - 389
Target Start/End: Complemental strand, 4876759 - 4876719
Alignment:
| Q |
349 |
tgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4876759 |
tgataacaaagtattgaagaacaattggaatactaacatat |
4876719 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 311 - 390
Target Start/End: Complemental strand, 17916062 - 17915983
Alignment:
| Q |
311 |
gaacaagagtggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattggaatactaacatata |
390 |
Q |
| |
|
|||||||| |||||||||||| | ||| | |||| ||||||| |||||||||||||||||| |||||||||||||||| |
|
|
| T |
17916062 |
gaacaagaatggttcatacaagttctcttagattttgatgataataaagtattgaagaacaataggaatactaacatata |
17915983 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 343 - 389
Target Start/End: Original strand, 19842132 - 19842178
Alignment:
| Q |
343 |
ttttcatgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
19842132 |
ttttgatgataacaaagtattgaagaacaattgcaatactaacatat |
19842178 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 312 - 389
Target Start/End: Complemental strand, 17919202 - 17919125
Alignment:
| Q |
312 |
aacaagagtggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
||||||| |||||||||||| |||||||| ||| ||||||| ||| ||||||||||||||| ||||| |||||||| |
|
|
| T |
17919202 |
aacaagaatggttcatacaagtcatctagaatttcgatgataaaaaaatattgaagaacaattagaatattaacatat |
17919125 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 886 - 926
Target Start/End: Complemental strand, 9223490 - 9223450
Alignment:
| Q |
886 |
ttgatggaagagatactcataaccttgaaacctatgaaaca |
926 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
9223490 |
ttgatggaagagatactcttaaccttgaaacctatgaaaca |
9223450 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 864 - 926
Target Start/End: Original strand, 9275909 - 9275973
Alignment:
| Q |
864 |
agcctctttggatgaa-tcaa-cattgatggaagagatactcataaccttgaaacctatgaaaca |
926 |
Q |
| |
|
|||||||||||||||| |||| || | ||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
9275909 |
agcctctttggatgaaatcaaacaataatggaagagatactcttaaccttgaaacctatgaaaca |
9275973 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 864 - 926
Target Start/End: Original strand, 9282590 - 9282654
Alignment:
| Q |
864 |
agcctctttggatgaa-tcaa-cattgatggaagagatactcataaccttgaaacctatgaaaca |
926 |
Q |
| |
|
|||||||||||||||| |||| || | ||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
9282590 |
agcctctttggatgaaatcaaacaataatggaagagatactcttaaccttgaaacctatgaaaca |
9282654 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 864 - 926
Target Start/End: Original strand, 9293561 - 9293625
Alignment:
| Q |
864 |
agcctctttggatgaa-tcaa-cattgatggaagagatactcataaccttgaaacctatgaaaca |
926 |
Q |
| |
|
|||||||||||||||| |||| || | ||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
9293561 |
agcctctttggatgaaatcaaacaataatggaagagatactcttaaccttgaaacctatgaaaca |
9293625 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 311 - 383
Target Start/End: Complemental strand, 8807891 - 8807819
Alignment:
| Q |
311 |
gaacaagagtggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattggaatacta |
383 |
Q |
| |
|
|||||||| |||||||||||| || |||||| |||| ||| || ||||||||||||||| ||| |||||||| |
|
|
| T |
8807891 |
gaacaagaatggttcatacaagtcctctagggttttgatgtaaaaaaagtattgaagaacgattagaatacta |
8807819 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 401 - 436
Target Start/End: Original strand, 9267633 - 9267668
Alignment:
| Q |
401 |
tacatgattatgctcccaactctaactttcttcttc |
436 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||| |
|
|
| T |
9267633 |
tacataattatgctcccaactctaactttcttcttc |
9267668 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 374
Target Start/End: Complemental strand, 8106131 - 8106061
Alignment:
| Q |
304 |
tttgtcggaacaagagtggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaatt |
374 |
Q |
| |
|
||||| ||||||| | ||||| |||||||| |||||| |||| |||||||||||||||| ||||| |||| |
|
|
| T |
8106131 |
tttgttggaacaaaattggtttgtacaattcctctagggttttgatgataacaaagtattaaagaataatt |
8106061 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 343 - 389
Target Start/End: Original strand, 10983391 - 10983437
Alignment:
| Q |
343 |
ttttcatgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| | ||| |||||||| |
|
|
| T |
10983391 |
ttttgatgataacaaagtattgaagaacaattagtataataacatat |
10983437 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0653 (Bit Score: 99; Significance: 3e-48; HSPs: 2)
Name: scaffold0653
Description:
Target: scaffold0653; HSP #1
Raw Score: 99; E-Value: 3e-48
Query Start/End: Original strand, 235 - 389
Target Start/End: Complemental strand, 4864 - 4710
Alignment:
| Q |
235 |
tggttggagccttctagggtggcttctaaatatgttagggcatgtattcttttcttctctgatggattgtttgtcggaacaagagtggttcatacaattc |
334 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||| ||| | ||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||| |
|
|
| T |
4864 |
tggttggagccttctacggtggcttctaaatatgtcggggtaggtattattttcttctctgatggattgtttttcggaacaagagttgttcatacaattc |
4765 |
T |
 |
| Q |
335 |
atctaggcttttcatgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
||||||| |||| ||||||||||| |||||||||| |||||||||| || ||||| |
|
|
| T |
4764 |
atctaggattttgatgataacaaactattgaagaataattggaatattagcatat |
4710 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0653; HSP #2
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 32 - 69
Target Start/End: Complemental strand, 5025 - 4988
Alignment:
| Q |
32 |
aacaacaactttggatatggcttatttgtttagaatca |
69 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5025 |
aacaacaactttggatatggcttatttgtttagaatca |
4988 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 57; Significance: 3e-23; HSPs: 10)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 305 - 389
Target Start/End: Complemental strand, 13645784 - 13645700
Alignment:
| Q |
305 |
ttgtcggaacaagagtggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
|||| ||||||||| ||||||||||||||| |||||| |||| ||||||||||||||||||| ||||||||| |||||||||||| |
|
|
| T |
13645784 |
ttgttggaacaagaatggttcatacaattcctctaggattttgatgataacaaagtattgaataacaattggtatactaacatat |
13645700 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 305 - 389
Target Start/End: Complemental strand, 13746209 - 13746125
Alignment:
| Q |
305 |
ttgtcggaacaagagtggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
|||| ||||||||| ||||||||||||||| |||||| |||| ||||||||||||||||||| ||||||||| |||||||||||| |
|
|
| T |
13746209 |
ttgttggaacaagaatggttcatacaattcctctaggattttgatgataacaaagtattgaataacaattggtatactaacatat |
13746125 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 311 - 389
Target Start/End: Complemental strand, 18566289 - 18566211
Alignment:
| Q |
311 |
gaacaagagtggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
|||||||| |||||||||||| || | |||| |||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18566289 |
gaacaagaatggttcatacaagtcctttagggttttgatgataacaaagtattgaagaacaattggaatactaacatat |
18566211 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 311 - 389
Target Start/End: Complemental strand, 5826784 - 5826706
Alignment:
| Q |
311 |
gaacaagagtggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
|||||||| |||||||||||| | |||| | |||| ||||||||||||||||| ||||||||||||||| |||||||| |
|
|
| T |
5826784 |
gaacaagaatggttcatacaagttttctaaggttttgatgataacaaagtattgcagaacaattggaatattaacatat |
5826706 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 313 - 389
Target Start/End: Original strand, 23432550 - 23432626
Alignment:
| Q |
313 |
acaagagtggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
|||||| | |||||||||| || |||| | |||| ||||||| ||||||| |||||||||||||||||||||||||| |
|
|
| T |
23432550 |
acaagaatcgttcatacaagtcctctaaggttttgatgataataaagtatcgaagaacaattggaatactaacatat |
23432626 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 320 - 389
Target Start/End: Complemental strand, 241235 - 241166
Alignment:
| Q |
320 |
tggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
|||||||||||| | ||| || |||| ||||||||||| | |||||||||||||||||||||||||||| |
|
|
| T |
241235 |
tggttcatacaagttctcttggattttgatgataacaaactgttgaagaacaattggaatactaacatat |
241166 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 320 - 389
Target Start/End: Complemental strand, 794590 - 794521
Alignment:
| Q |
320 |
tggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
|||||||||||| | ||| || |||| ||||||||||| | |||||||||||||||||||||||||||| |
|
|
| T |
794590 |
tggttcatacaagttctcttggattttgatgataacaaactgttgaagaacaattggaatactaacatat |
794521 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 315 - 389
Target Start/End: Complemental strand, 5829385 - 5829311
Alignment:
| Q |
315 |
aagagtggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
|||| |||||||||||| | |||| | |||| ||||||||||||||||| ||||||||||||||| ||||||| |
|
|
| T |
5829385 |
aagaatggttcatacaagttctctaaggttttgatgataacaaagtattgcagaacaattggaatataaacatat |
5829311 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 348 - 389
Target Start/End: Original strand, 211049 - 211090
Alignment:
| Q |
348 |
atgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
||||||||||| | |||||||||||||||||||||||||||| |
|
|
| T |
211049 |
atgataacaaactgttgaagaacaattggaatactaacatat |
211090 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 348 - 389
Target Start/End: Original strand, 724672 - 724713
Alignment:
| Q |
348 |
atgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
||||||||||| | |||||||||||||||||||||||||||| |
|
|
| T |
724672 |
atgataacaaactgttgaagaacaattggaatactaacatat |
724713 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 56; Significance: 1e-22; HSPs: 11)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 310 - 389
Target Start/End: Original strand, 26654312 - 26654391
Alignment:
| Q |
310 |
ggaacaagagtggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
||||||||||||||||||||||||| ||| | |||| ||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
26654312 |
ggaacaagagtggttcatacaattcctctgaggttttgatgataacaaagtattgaagaacaattggaagactaacatat |
26654391 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 310 - 389
Target Start/End: Original strand, 26652769 - 26652848
Alignment:
| Q |
310 |
ggaacaagagtggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
|||| |||| |||||||||||||| |||| | ||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26652769 |
ggaaaaagaatggttcatacaattactctaaggatttgatgataacaaagtattgaagaacaattggaatactaacatat |
26652848 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 311 - 386
Target Start/End: Original strand, 16151849 - 16151924
Alignment:
| Q |
311 |
gaacaagagtggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattggaatactaaca |
386 |
Q |
| |
|
|||||||| ||||| ||| || || |||||| |||| ||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
16151849 |
gaacaagaatggtttatagaagtcctctagggttttgatgataacagagtattgaagaacaattggaatactaaca |
16151924 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 311 - 389
Target Start/End: Complemental strand, 24216469 - 24216391
Alignment:
| Q |
311 |
gaacaagagtggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
|||||||| |||||||||||| | |||| || |||| ||||||||| |||||||||||||||||||| ||| ||||||| |
|
|
| T |
24216469 |
gaacaagaatggttcatacaagttatcttgggttttgatgataacagagtattgaagaacaattggattacgaacatat |
24216391 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 377
Target Start/End: Original strand, 21547874 - 21547941
Alignment:
| Q |
310 |
ggaacaagagtggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattgga |
377 |
Q |
| |
|
||||||| ||||||| |||||||| |||| | |||| |||||| ||||||||||||||||||||||| |
|
|
| T |
21547874 |
ggaacaaaagtggtttgtacaattcctctaaggttttgatgataccaaagtattgaagaacaattgga |
21547941 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 343 - 389
Target Start/End: Complemental strand, 8686118 - 8686072
Alignment:
| Q |
343 |
ttttcatgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
|||| ||||||| ||||||| |||||||||||||||||||||||||| |
|
|
| T |
8686118 |
ttttgatgataataaagtatcgaagaacaattggaatactaacatat |
8686072 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 327 - 377
Target Start/End: Original strand, 22311203 - 22311253
Alignment:
| Q |
327 |
tacaattcatctaggcttttcatgataacaaagtattgaagaacaattgga |
377 |
Q |
| |
|
|||||||| |||| | |||| |||||||||||||||||||||||||||||| |
|
|
| T |
22311203 |
tacaattcctctaaggttttgatgataacaaagtattgaagaacaattgga |
22311253 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 343 - 389
Target Start/End: Complemental strand, 25348530 - 25348484
Alignment:
| Q |
343 |
ttttcatgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
25348530 |
ttttgatgataacaaagtattgaagaacaattgatatactaacatat |
25348484 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 304 - 377
Target Start/End: Complemental strand, 21585125 - 21585052
Alignment:
| Q |
304 |
tttgtcggaacaagagtggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattgga |
377 |
Q |
| |
|
||||| ||||||| ||||||| |||||||| |||| | |||| | ||||||||||||||||||||| |||||| |
|
|
| T |
21585125 |
tttgttggaacaaaagtggtttgtacaattcctctaaggttttgaggataacaaagtattgaagaacgattgga |
21585052 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 377
Target Start/End: Complemental strand, 18848829 - 18848762
Alignment:
| Q |
310 |
ggaacaagagtggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattgga |
377 |
Q |
| |
|
||||||| | ||||| ||||||| ||||| |||| |||||||||||||||||||||||||||||| |
|
|
| T |
18848829 |
ggaacaaaattggtttgtacaatttctctagagtttttatgataacaaagtattgaagaacaattgga |
18848762 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 343 - 376
Target Start/End: Original strand, 17417097 - 17417130
Alignment:
| Q |
343 |
ttttcatgataacaaagtattgaagaacaattgg |
376 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| |
|
|
| T |
17417097 |
ttttgatgataacaaagtattgaagaacaattgg |
17417130 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 55; Significance: 5e-22; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 315 - 389
Target Start/End: Complemental strand, 8912147 - 8912073
Alignment:
| Q |
315 |
aagagtggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
|||| ||||||||||||||| |||||| |||| |||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
8912147 |
aagaatggttcatacaattcctctaggattttgatgataacaaagcattgaagaacaattggaatactaacatat |
8912073 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 311 - 389
Target Start/End: Original strand, 22316331 - 22316409
Alignment:
| Q |
311 |
gaacaagagtggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
|||||||| |||||| ||||| || |||||| |||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22316331 |
gaacaagaatggttcgtacaagtcctctaggattttgatgataacaaagtattgaagaacaattggaatactaacatat |
22316409 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 314 - 389
Target Start/End: Original strand, 12333717 - 12333792
Alignment:
| Q |
314 |
caagagtggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
||||||||||||||| ||||| |||||| |||| ||||||||||| |||||||||||||||||| ||||||||||| |
|
|
| T |
12333717 |
caagagtggttcataaaattcctctagggttttgatgataacaaaatattgaagaacaattggattactaacatat |
12333792 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 311 - 389
Target Start/End: Original strand, 16321822 - 16321900
Alignment:
| Q |
311 |
gaacaagagtggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
|||||||| |||||||||||| | |||||| |||| ||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
16321822 |
gaacaagaatggttcatacaagttctctagggttttgatgataacaaagtattgaagaacaatttgaatactaacatat |
16321900 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 327 - 389
Target Start/End: Original strand, 22222328 - 22222391
Alignment:
| Q |
327 |
tacaattcatctaggcttttcatgataacaaagtattgaagaacaattgga-atactaacatat |
389 |
Q |
| |
|
|||||||| |||| | |||| ||||||||||||||||||||||||| |||| ||||||| |||| |
|
|
| T |
22222328 |
tacaattcctctaaggttttgatgataacaaagtattgaagaacaagtggacatactaatatat |
22222391 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 343 - 377
Target Start/End: Complemental strand, 20245800 - 20245766
Alignment:
| Q |
343 |
ttttcatgataacaaagtattgaagaacaattgga |
377 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| |
|
|
| T |
20245800 |
ttttgatgataacaaagtattgaagaacaattgga |
20245766 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 54; Significance: 2e-21; HSPs: 13)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 306 - 387
Target Start/End: Complemental strand, 19134203 - 19134122
Alignment:
| Q |
306 |
tgtcggaacaagagtggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattggaatactaacat |
387 |
Q |
| |
|
|||| |||||||| || |||||||||||| |||||| |||| |||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
19134203 |
tgtcagaacaagaatgattcatacaattcctctaggattttgatgatatcaaagtattgaagaacaattggaatactaacat |
19134122 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 311 - 389
Target Start/End: Complemental strand, 10482552 - 10482474
Alignment:
| Q |
311 |
gaacaagagtggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
|||||||| ||||||||||||||| |||| | |||| | ||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
10482552 |
gaacaagaatggttcatacaattcctctaagattttgaagataacaaagtattgaaaaacaattggaatactaacatat |
10482474 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 310 - 389
Target Start/End: Complemental strand, 225920 - 225841
Alignment:
| Q |
310 |
ggaacaagagtggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
||||||||||||||||||||||||| |||||| |||| || ||||||||||||| ||||| ||||| ||| ||||||||| |
|
|
| T |
225920 |
ggaacaagagtggttcatacaattcctctagggttttgataataacaaagtatttaagaagaattgaaatcctaacatat |
225841 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 310 - 389
Target Start/End: Original strand, 239458 - 239537
Alignment:
| Q |
310 |
ggaacaagagtggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
|||||||||||||||||||||||| | ||| |||| |||||||||||||||| ||||| ||||||||||||||||||| |
|
|
| T |
239458 |
ggaacaagagtggttcatacaatttctttagagttttgatgataacaaagtatttaagaaaaattggaatactaacatat |
239537 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 306 - 389
Target Start/End: Complemental strand, 27124796 - 27124713
Alignment:
| Q |
306 |
tgtcggaacaagagtggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
|||| |||||||| |||||||||||| | ||| || |||| ||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
27124796 |
tgtcagaacaagaatggttcatacaagttctcttgggttttgatgataacaaagtattgaagaacaattggtatactaacatat |
27124713 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 311 - 389
Target Start/End: Original strand, 21686654 - 21686732
Alignment:
| Q |
311 |
gaacaagagtggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
|||||||| ||||||||| || | ||| || |||| ||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
21686654 |
gaacaagaatggttcatagaagttctcttgggtttttatgatgacaaagtattgaagaacaattggaatactaacatat |
21686732 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 389
Target Start/End: Complemental strand, 14201777 - 14201699
Alignment:
| Q |
311 |
gaacaagagtggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
|||||| | |||||||||||| | || | || |||| |||||||||||||||| ||| ||||||||||||||||||||| |
|
|
| T |
14201777 |
gaacaaaaatggttcatacaagttattttgggttttgatgataacaaagtattaaagtacaattggaatactaacatat |
14201699 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 348 - 389
Target Start/End: Complemental strand, 19731963 - 19731922
Alignment:
| Q |
348 |
atgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
19731963 |
atgataacaaagtattgatgaacaattggaatactaacatat |
19731922 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 311 - 389
Target Start/End: Original strand, 7775101 - 7775178
Alignment:
| Q |
311 |
gaacaagagtggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
|||||||| |||||||||||| | ||| || |||| |||||||||||||||||||||| ||||| |||||||| |||| |
|
|
| T |
7775101 |
gaacaagaatggttcatacaagttctctggg-ttttgatgataacaaagtattgaagaataattgaaatactaatatat |
7775178 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 373
Target Start/End: Original strand, 18614925 - 18614970
Alignment:
| Q |
327 |
tacaattcatctaggcttttcatgataacaaagtattgaagaacaat |
373 |
Q |
| |
|
|||||||| |||||| |||| |||||||||||||||||||||||||| |
|
|
| T |
18614925 |
tacaattcctctagg-ttttgatgataacaaagtattgaagaacaat |
18614970 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 343 - 377
Target Start/End: Complemental strand, 26239051 - 26239017
Alignment:
| Q |
343 |
ttttcatgataacaaagtattgaagaacaattgga |
377 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| |
|
|
| T |
26239051 |
ttttgatgataacaaagtattgaagaacaattgga |
26239017 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 343 - 389
Target Start/End: Original strand, 28952275 - 28952321
Alignment:
| Q |
343 |
ttttcatgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
|||| ||||||| |||||||||||||||||||||| ||||| ||||| |
|
|
| T |
28952275 |
ttttgatgataataaagtattgaagaacaattggattactaccatat |
28952321 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 352 - 389
Target Start/End: Complemental strand, 1637085 - 1637048
Alignment:
| Q |
352 |
taacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
||||||||||||||||||||||| | |||||||||||| |
|
|
| T |
1637085 |
taacaaagtattgaagaacaatttgtatactaacatat |
1637048 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 51; Significance: 1e-19; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 311 - 389
Target Start/End: Complemental strand, 9824754 - 9824677
Alignment:
| Q |
311 |
gaacaagagtggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
|||||| | ||||||||||||||| |||||| |||| |||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
9824754 |
gaacaaaaatggttcatacaattcctctagg-ttttgatgataacaaagtattgaagaacaattgaaatactaacatat |
9824677 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 311 - 388
Target Start/End: Complemental strand, 28760936 - 28760859
Alignment:
| Q |
311 |
gaacaagagtggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattggaatactaacata |
388 |
Q |
| |
|
|||||||| |||||||||||| | ||| || |||| ||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
28760936 |
gaacaagaatggttcatacaaattctcttggattttgatgataacaaagtattgaagaacaattggtatactaacata |
28760859 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 304 - 377
Target Start/End: Original strand, 24492048 - 24492121
Alignment:
| Q |
304 |
tttgtcggaacaagagtggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattgga |
377 |
Q |
| |
|
||||| ||||||| ||||||| |||||||| |||| | |||| |||||||||||||||||||||||||||||| |
|
|
| T |
24492048 |
tttgttggaacaaaagtggtttgtacaattcctctaaggttttgatgataacaaagtattgaagaacaattgga |
24492121 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 343 - 389
Target Start/End: Complemental strand, 25570198 - 25570152
Alignment:
| Q |
343 |
ttttcatgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
25570198 |
ttttgatgataacaaagtattgaagaacaattggattactaacatat |
25570152 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 305 - 389
Target Start/End: Original strand, 21215297 - 21215381
Alignment:
| Q |
305 |
ttgtcggaacaagagtggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
|||| ||||||||| |||||||||||||| | | || |||| ||||||||||||||||||||| |||| |||||| ||||||| |
|
|
| T |
21215297 |
ttgttggaacaagaatggttcatacaatttctgttggattttgatgataacaaagtattgaagagtaattagaatacgaacatat |
21215381 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 389
Target Start/End: Original strand, 24884857 - 24884935
Alignment:
| Q |
311 |
gaacaagagtggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
|||||||| |||||||||||| | | | || |||| |||||||||||||||| ||||| ||||| |||||||||||| |
|
|
| T |
24884857 |
gaacaagaatggttcatacaagttcttttggattttgatgataacaaagtattaaagaataattgatatactaacatat |
24884935 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 50; Significance: 5e-19; HSPs: 9)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 311 - 388
Target Start/End: Original strand, 13340391 - 13340468
Alignment:
| Q |
311 |
gaacaagagtggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattggaatactaacata |
388 |
Q |
| |
|
|||||| | |||||||||||| || |||| | |||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13340391 |
gaacaacaatggttcatacaagtcctctaaggttttgatgataacaaagtattgaagaacaattggaatactaacata |
13340468 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 311 - 388
Target Start/End: Original strand, 13177491 - 13177568
Alignment:
| Q |
311 |
gaacaagagtggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattggaatactaacata |
388 |
Q |
| |
|
|||||| | |||||||||||| || |||| | |||| ||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
13177491 |
gaacaacaatggttcatacaagtcctctaaggttttgatgataaaaaagtattgaagaacaattggaatactaacata |
13177568 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 323 - 389
Target Start/End: Original strand, 11360465 - 11360531
Alignment:
| Q |
323 |
ttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
|||||| || || |||||| |||| ||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
11360465 |
ttcatagaagtcctctaggattttgatgatgacaaagtattgaagaacaattggaatactaacatat |
11360531 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 343 - 388
Target Start/End: Complemental strand, 9324026 - 9323981
Alignment:
| Q |
343 |
ttttcatgataacaaagtattgaagaacaattggaatactaacata |
388 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9324026 |
ttttgatgataacaaagtattgaagaacaattggaatactaacata |
9323981 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 349 - 389
Target Start/End: Original strand, 15330957 - 15330997
Alignment:
| Q |
349 |
tgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15330957 |
tgataacaaagtattgaagaacaattggaatactaacatat |
15330997 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 343 - 386
Target Start/End: Complemental strand, 21318820 - 21318777
Alignment:
| Q |
343 |
ttttcatgataacaaagtattgaagaacaattggaatactaaca |
386 |
Q |
| |
|
|||| ||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
21318820 |
ttttgatgataataaagtattgaagaacaattggaatactaaca |
21318777 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 305 - 377
Target Start/End: Original strand, 14426867 - 14426939
Alignment:
| Q |
305 |
ttgtcggaacaagagtggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattgga |
377 |
Q |
| |
|
|||| ||||||| | ||||| |||||||| |||| | |||| |||||||||||||||| ||||||||||||| |
|
|
| T |
14426867 |
ttgttggaacaaaattggtttgtacaattcctctaagattttgatgataacaaagtattaaagaacaattgga |
14426939 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 377
Target Start/End: Original strand, 16198651 - 16198701
Alignment:
| Q |
327 |
tacaattcatctaggcttttcatgataacaaagtattgaagaacaattgga |
377 |
Q |
| |
|
||||||||||||| | |||| ||||||||||||||||||||| ||||||| |
|
|
| T |
16198651 |
tacaattcatctaaggttttgttgataacaaagtattgaagaataattgga |
16198701 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 373
Target Start/End: Complemental strand, 46349479 - 46349433
Alignment:
| Q |
327 |
tacaattcatctaggcttttcatgataacaaagtattgaagaacaat |
373 |
Q |
| |
|
|||||||| |||| | |||| |||||||||||||||||||||||||| |
|
|
| T |
46349479 |
tacaattcttctaagattttgatgataacaaagtattgaagaacaat |
46349433 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 46; Significance: 1e-16; HSPs: 1)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 311 - 388
Target Start/End: Complemental strand, 129497 - 129420
Alignment:
| Q |
311 |
gaacaagagtggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattggaatactaacata |
388 |
Q |
| |
|
|||||| | |||||||||||| || |||| | |||| ||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
129497 |
gaacaacaatggttcatacaagtcctctaaggttttgatgataaaaaagtattgaagaacaattggaatactaacata |
129420 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0300 (Bit Score: 39; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0300
Description:
Target: scaffold0300; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 343 - 389
Target Start/End: Complemental strand, 12526 - 12480
Alignment:
| Q |
343 |
ttttcatgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
12526 |
ttttgatgataacaaagtattgaagaacaattggtatactaacatat |
12480 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0300; HSP #2
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 312 - 389
Target Start/End: Complemental strand, 7838 - 7761
Alignment:
| Q |
312 |
aacaagagtggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
||||||| |||||||||||| | ||| || |||| || |||||||||||||||| ||||||||| |||||||||||| |
|
|
| T |
7838 |
aacaagaatggttcatacaagttctcttgggttttgatcataacaaagtattgaaaaacaattggtatactaacatat |
7761 |
T |
 |
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Target: scaffold0041 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0041
Description:
Target: scaffold0041; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 389
Target Start/End: Complemental strand, 26971 - 26893
Alignment:
| Q |
311 |
gaacaagagtggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
|||||||| || |||||| |||| | |||| ||| ||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
26971 |
gaacaagaatgattcatataatttttatagggtttcgatgataacaaagtatcgaagaacaattggaatactaacatat |
26893 |
T |
 |
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Target: scaffold0520 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0520
Description:
Target: scaffold0520; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 343 - 389
Target Start/End: Original strand, 7629 - 7675
Alignment:
| Q |
343 |
ttttcatgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
|||| |||||||||||||||| ||||||||||||| ||||||||||| |
|
|
| T |
7629 |
ttttgatgataacaaagtattcaagaacaattggattactaacatat |
7675 |
T |
 |
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Target: chr1 (Bit Score: 35; Significance: 0.0000000004; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 343 - 389
Target Start/End: Complemental strand, 9985273 - 9985227
Alignment:
| Q |
343 |
ttttcatgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
|||| ||||||||||| |||||||||||||||| ||||||||||||| |
|
|
| T |
9985273 |
ttttgatgataacaaattattgaagaacaattgaaatactaacatat |
9985227 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 389
Target Start/End: Original strand, 24005853 - 24005935
Alignment:
| Q |
305 |
ttgtcggaacaagagtggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
|||| |||||||||||||| ||||||||| |||||| |||| |||||||||| ||| |||||| | || |||||||||||||| |
|
|
| T |
24005853 |
ttgttggaacaagagtggt--atacaattcctctagggttttgatgataacaacgtactgaagatcttttagaatactaacatat |
24005935 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 377
Target Start/End: Original strand, 15650715 - 15650782
Alignment:
| Q |
310 |
ggaacaagagtggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattgga |
377 |
Q |
| |
|
||||||| | ||||| |||||||| |||| | |||| ||||||| |||||||||||||||||||||| |
|
|
| T |
15650715 |
ggaacaaaattggtttgtacaattcctctaaggttttgatgataataaagtattgaagaacaattgga |
15650782 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 377
Target Start/End: Original strand, 15787406 - 15787456
Alignment:
| Q |
327 |
tacaattcatctaggcttttcatgataacaaagtattgaagaacaattgga |
377 |
Q |
| |
|
|||||||| |||| | |||| |||||||||||||||||| ||||||||||| |
|
|
| T |
15787406 |
tacaattcctctaaggttttgatgataacaaagtattgacgaacaattgga |
15787456 |
T |
 |
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Target: scaffold0711 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0711
Description:
Target: scaffold0711; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 355 - 389
Target Start/End: Original strand, 1309 - 1343
Alignment:
| Q |
355 |
caaagtattgaagaacaattggaatactaacatat |
389 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| |
|
|
| T |
1309 |
caaagtattaaagaacaattggaatactaacatat |
1343 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0053 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0053
Description:
Target: scaffold0053; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 312 - 377
Target Start/End: Complemental strand, 28391 - 28326
Alignment:
| Q |
312 |
aacaagagtggttcatacaattcatctaggcttttcatgataacaaagtattgaagaacaattgga |
377 |
Q |
| |
|
||||| ||||||| |||||||| |||| | |||| ||||||||||| ||||||||| |||||||| |
|
|
| T |
28391 |
aacaaaagtggtttgtacaattcctctaaggttttgatgataacaaaatattgaagatcaattgga |
28326 |
T |
 |
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