View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5718-Insertion-7 (Length: 191)
Name: NF5718-Insertion-7
Description: NF5718
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5718-Insertion-7 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 146; Significance: 4e-77; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 6 - 191
Target Start/End: Complemental strand, 39088072 - 39087884
Alignment:
| Q |
6 |
caacactcacattcatca---ggaaacattagagagtcacatgcaaaggaaaaatcagacaaaccaaggcaaccnnnnnnncattccaaacattcaacac |
102 |
Q |
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| T |
39088072 |
caacactcacattcatcatcaggaaacattagagagtcacatgcaaaggaaaaatcagacaaaccaaggcaaccaaaaaaacattcgaaacattcaacac |
39087973 |
T |
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| Q |
103 |
caaataatgattcattcaacaatgaatcaaaactcacaacaacagagcaaagtagaccaatggatacagattctctccaactccatgga |
191 |
Q |
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| T |
39087972 |
caaataatgattcattcaacaatgaatcaaaactcacaacaacagagcaaagtagatcaatggatacagattctctccaactccatgga |
39087884 |
T |
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