View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5718_high_12 (Length: 339)
Name: NF5718_high_12
Description: NF5718
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5718_high_12 |
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Alignment Details
Target: chr8 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 9 - 266
Target Start/End: Original strand, 23356070 - 23356327
Alignment:
| Q |
9 |
agcataggatttgtataaaagtaagtgtttgtaatatatggttcccgtagtttgttgattgtcaaggtcatagcaataattgataggtgaattatactgt |
108 |
Q |
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| T |
23356070 |
agcattggatttgtataaaagtaagtgtttgtaatatatggttcccctagtttgttgattgtcaaggtcatagcaataattgataggtgaattatactgt |
23356169 |
T |
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| Q |
109 |
ttacttcatttcatgtggatggtgtttcgtagtaagtacatttcgcggatatgacacgcaggagaccgatccagtcaactctaaagatcgaaattcttcc |
208 |
Q |
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| T |
23356170 |
ttacttcatttcatgtggatggtgtttcgtagtaagtacatttcgcggatatgacacgtaggagaccgatccagtcaactctaaagatcgaaattcttcc |
23356269 |
T |
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| Q |
209 |
caccccgtcaactataaagaacaaaattctttgtctttatattattgggataagagtc |
266 |
Q |
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| T |
23356270 |
cacccagtcaactataaagaacaaaattcttggtctttaaattattgggataagagtc |
23356327 |
T |
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