View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5718_high_21 (Length: 247)

Name: NF5718_high_21
Description: NF5718
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5718_high_21
NF5718_high_21
[»] chr2 (29 HSPs)
chr2 (2-111)||(13150808-13150914)
chr2 (193-247)||(723565-723620)
chr2 (193-247)||(34139591-34139646)
chr2 (173-247)||(5723052-5723129)
chr2 (193-247)||(11049840-11049894)
chr2 (193-246)||(36987893-36987947)
chr2 (209-247)||(45100049-45100087)
chr2 (193-245)||(42362642-42362695)
chr2 (212-247)||(4484166-4484201)
chr2 (193-247)||(6594822-6594877)
chr2 (212-247)||(11067595-11067630)
chr2 (193-247)||(14633646-14633701)
chr2 (193-247)||(17057187-17057242)
chr2 (193-247)||(17085170-17085225)
chr2 (212-247)||(33162292-33162327)
chr2 (212-247)||(36205503-36205538)
chr2 (193-247)||(36773853-36773908)
chr2 (193-247)||(38312535-38312590)
chr2 (191-246)||(39285130-39285185)
chr2 (193-246)||(2334236-2334290)
chr2 (192-247)||(11690782-11690838)
chr2 (212-244)||(30833646-30833678)
chr2 (216-247)||(12123434-12123465)
chr2 (193-247)||(24885880-24885935)
chr2 (194-247)||(4502952-4503006)
chr2 (193-247)||(13122054-13122108)
chr2 (201-246)||(7815113-7815157)
chr2 (215-244)||(32289866-32289895)
chr2 (192-244)||(2838243-2838295)
[»] chr3 (31 HSPs)
chr3 (193-247)||(2074901-2074955)
chr3 (193-247)||(40735677-40735732)
chr3 (193-247)||(9635942-9635997)
chr3 (193-247)||(22834825-22834880)
chr3 (192-247)||(32891385-32891440)
chr3 (193-247)||(40734792-40734847)
chr3 (193-247)||(27305537-27305590)
chr3 (194-245)||(761141-761193)
chr3 (212-247)||(5257982-5258017)
chr3 (212-247)||(5260161-5260196)
chr3 (212-247)||(7762561-7762596)
chr3 (193-247)||(9581578-9581633)
chr3 (193-247)||(9666288-9666343)
chr3 (212-247)||(29196228-29196263)
chr3 (212-247)||(37406984-37407019)
chr3 (212-247)||(37408754-37408789)
chr3 (192-246)||(39153182-39153237)
chr3 (192-241)||(29682657-29682707)
chr3 (212-244)||(801388-801420)
chr3 (193-247)||(9634640-9634694)
chr3 (212-247)||(19683726-19683761)
chr3 (192-247)||(21350829-21350884)
chr3 (212-247)||(23197782-23197817)
chr3 (212-247)||(23199975-23200010)
chr3 (192-246)||(29811164-29811219)
chr3 (212-247)||(45095458-45095493)
chr3 (193-247)||(51351959-51352013)
chr3 (216-245)||(16499311-16499340)
chr3 (192-247)||(23391730-23391786)
chr3 (192-247)||(29813356-29813412)
chr3 (175-247)||(31314735-31314810)
[»] chr7 (26 HSPs)
chr7 (193-247)||(23344260-23344314)
chr7 (194-247)||(4179068-4179122)
chr7 (192-247)||(23555336-23555392)
chr7 (192-247)||(47675954-47676010)
chr7 (208-247)||(495822-495861)
chr7 (193-247)||(25616150-25616205)
chr7 (208-247)||(27348112-27348151)
chr7 (192-247)||(31105218-31105273)
chr7 (212-247)||(35854211-35854246)
chr7 (212-247)||(36146250-36146285)
chr7 (193-247)||(41648832-41648887)
chr7 (212-247)||(48409102-48409137)
chr7 (212-247)||(48489726-48489761)
chr7 (212-246)||(19502474-19502508)
chr7 (192-242)||(14069651-14069702)
chr7 (192-242)||(14379679-14379730)
chr7 (212-247)||(25766795-25766830)
chr7 (212-247)||(29991348-29991383)
chr7 (212-247)||(41317277-41317312)
chr7 (212-246)||(4586457-4586491)
chr7 (212-246)||(31732807-31732841)
chr7 (193-242)||(38671043-38671093)
chr7 (192-247)||(18126941-18126997)
chr7 (192-247)||(26417611-26417667)
chr7 (188-247)||(30843299-30843358)
chr7 (192-247)||(47673762-47673818)
[»] chr8 (29 HSPs)
chr8 (193-247)||(5689562-5689617)
chr8 (193-247)||(30143635-30143690)
chr8 (193-247)||(41366436-41366491)
chr8 (192-247)||(15213081-15213137)
chr8 (192-247)||(34254148-34254204)
chr8 (192-247)||(34256324-34256380)
chr8 (193-247)||(6599260-6599315)
chr8 (193-247)||(6674713-6674768)
chr8 (212-247)||(12702469-12702504)
chr8 (200-247)||(19491529-19491576)
chr8 (193-247)||(19945177-19945232)
chr8 (193-247)||(33352445-33352500)
chr8 (193-247)||(42498490-42498545)
chr8 (212-247)||(44304150-44304185)
chr8 (213-247)||(4734001-4734035)
chr8 (194-247)||(17982948-17983002)
chr8 (194-247)||(31218552-31218606)
chr8 (193-246)||(7493284-7493336)
chr8 (213-246)||(43036718-43036751)
chr8 (174-243)||(4731957-4732029)
chr8 (212-247)||(1746057-1746092)
chr8 (212-247)||(3303509-3303544)
chr8 (212-247)||(18105914-18105949)
chr8 (212-247)||(27811573-27811608)
chr8 (193-247)||(8154075-8154129)
chr8 (193-247)||(8965510-8965563)
chr8 (215-244)||(2628037-2628066)
chr8 (204-241)||(6127872-6127909)
chr8 (219-247)||(1345221-1345249)
[»] chr5 (22 HSPs)
chr5 (192-246)||(28750473-28750528)
chr5 (193-244)||(16409777-16409829)
chr5 (193-244)||(16649653-16649705)
chr5 (192-247)||(30682740-30682796)
chr5 (192-247)||(42428248-42428304)
chr5 (192-246)||(534054-534109)
chr5 (193-247)||(5887253-5887308)
chr5 (212-247)||(8565786-8565821)
chr5 (212-247)||(13343355-13343390)
chr5 (212-247)||(30182883-30182918)
chr5 (212-247)||(39468387-39468422)
chr5 (212-245)||(33831975-33832008)
chr5 (192-247)||(3075567-3075623)
chr5 (212-244)||(9789060-9789092)
chr5 (192-247)||(36073860-36073916)
chr5 (192-246)||(538316-538371)
chr5 (193-247)||(31183268-31183323)
chr5 (212-247)||(42426074-42426109)
chr5 (212-246)||(13240047-13240081)
chr5 (212-246)||(19806658-19806692)
chr5 (215-244)||(18441483-18441512)
chr5 (215-244)||(26178184-26178213)
[»] chr4 (24 HSPs)
chr4 (193-247)||(29999647-29999702)
chr4 (193-247)||(34570232-34570287)
chr4 (193-247)||(48143343-48143398)
chr4 (193-247)||(48893461-48893516)
chr4 (193-247)||(52082481-52082536)
chr4 (193-247)||(56178454-56178509)
chr4 (212-247)||(13992129-13992164)
chr4 (192-246)||(26175454-26175509)
chr4 (193-247)||(45687005-45687060)
chr4 (212-247)||(46147234-46147269)
chr4 (193-247)||(47038234-47038289)
chr4 (193-247)||(37229547-37229601)
chr4 (214-247)||(5872112-5872145)
chr4 (194-247)||(48142206-48142259)
chr4 (193-241)||(5207669-5207717)
chr4 (212-244)||(31495142-31495174)
chr4 (193-247)||(5369900-5369955)
chr4 (212-247)||(9927297-9927332)
chr4 (192-246)||(12743746-12743801)
chr4 (214-247)||(6542027-6542060)
chr4 (192-244)||(4588249-4588301)
chr4 (192-247)||(37740920-37740976)
chr4 (192-247)||(52467175-52467231)
chr4 (193-244)||(54199726-54199778)
[»] chr1 (24 HSPs)
chr1 (193-247)||(833988-834043)
chr1 (193-247)||(8550602-8550657)
chr1 (192-246)||(13137798-13137853)
chr1 (193-247)||(49918645-49918700)
chr1 (208-247)||(196744-196783)
chr1 (212-247)||(3157160-3157195)
chr1 (193-247)||(20762963-20763018)
chr1 (193-247)||(40122019-40122074)
chr1 (200-247)||(41361205-41361252)
chr1 (212-247)||(45644196-45644231)
chr1 (212-247)||(50167018-50167053)
chr1 (193-246)||(3189640-3189694)
chr1 (193-246)||(3198457-3198511)
chr1 (193-246)||(3207296-3207350)
chr1 (212-244)||(20622071-20622103)
chr1 (192-247)||(28223239-28223295)
chr1 (192-247)||(37559682-37559738)
chr1 (212-244)||(51765697-51765729)
chr1 (212-247)||(3846959-3846994)
chr1 (193-247)||(31659533-31659588)
chr1 (192-247)||(44646633-44646687)
chr1 (193-247)||(50169033-50169088)
chr1 (201-247)||(15820591-15820636)
chr1 (216-245)||(13659193-13659222)
[»] chr6 (14 HSPs)
chr6 (200-247)||(9182856-9182904)
chr6 (212-247)||(5408908-5408943)
chr6 (212-247)||(5413233-5413268)
chr6 (193-247)||(28137229-28137284)
chr6 (174-238)||(257242-257308)
chr6 (193-246)||(26954109-26954163)
chr6 (193-246)||(33160169-33160223)
chr6 (212-244)||(412387-412419)
chr6 (212-244)||(2171365-2171397)
chr6 (212-244)||(3072595-3072627)
chr6 (193-247)||(3038745-3038800)
chr6 (212-247)||(9182828-9182863)
chr6 (212-247)||(16452166-16452201)
chr6 (212-247)||(30834372-30834407)
[»] scaffold0016 (1 HSPs)
scaffold0016 (193-247)||(114898-114954)
[»] scaffold1668 (1 HSPs)
scaffold1668 (192-247)||(1319-1375)
[»] scaffold0286 (1 HSPs)
scaffold0286 (212-244)||(11864-11896)
[»] scaffold0002 (1 HSPs)
scaffold0002 (212-244)||(434832-434864)
[»] scaffold0491 (1 HSPs)
scaffold0491 (212-246)||(10997-11031)
[»] scaffold0066 (1 HSPs)
scaffold0066 (212-246)||(20253-20287)
[»] scaffold0006 (1 HSPs)
scaffold0006 (216-245)||(148954-148983)


Alignment Details
Target: chr2 (Bit Score: 92; Significance: 8e-45; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 13150808 - 13150914
Alignment:
Q  2 tgttagtcaatagcctatatgctttcagcccttcttcttagtaaggacggacagatagtttgtctggatatatttccacatatatagtaaatagaaattc 101  Q
    ||||||||||||||||||||||||||||||||||   ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13150808 tgttagtcaatagcctatatgctttcagcccttc---ttagtaaagacggacagatagtttgtctggatatatttccacatatatagtaaatagaaattc 13150904  T
Q  102 aatccatata 111  Q
    ||||||||||    
T  13150905 aatccatata 13150914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 723565 - 723620
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  723565 aaaatcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaata 723620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 34139591 - 34139646
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  34139591 aaaatcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaata 34139646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 5723052 - 5723129
Alignment:
Q  173 taattgttgtgaat--cgaataaaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||||||||||  || | |||||||| ||||||| ||| ||||||||||||||||||| ||||||||||||||||    
T  5723052 taattgttgtgaattccgtacaaaaatcacaccaatacaaactatgatgtgtggagcaaagtaaagtagtaaccaata 5723129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 11049894 - 11049840
Alignment:
Q  193 aaaatcaaaccaataaaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| |||||||||| ||||||| |||||||||| |||||||||||||||||    
T  11049894 aaaatcacaccaataaaactatgatgcgtggagcaaaagaaagtagtaaccaata 11049840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 36987893 - 36987947
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaat 246  Q
    ||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||    
T  36987893 aaaatcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaat 36987947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 209 - 247
Target Start/End: Complemental strand, 45100087 - 45100049
Alignment:
Q  209 aattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    |||||||||||||||||||||||||||||||||||||||    
T  45100087 aattatgatgtgtggagcaaaggaaagtagtaaccaata 45100049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 42362695 - 42362642
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaa 245  Q
    ||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||    
T  42362695 aaaatcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaa 42362642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 247
Target Start/End: Original strand, 4484166 - 4484201
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||||||||||||||||||||||||||||||||    
T  4484166 tatgatgtgtggagcaaaggaaagtagtaaccaata 4484201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 6594822 - 6594877
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||| ||| ||||||||||||||||||| ||||||||||||||||    
T  6594822 aaaatcacaccaatacaaactatgatgtgtggagcaaagtaaagtagtaaccaata 6594877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 247
Target Start/End: Complemental strand, 11067630 - 11067595
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||||||||||||||||||||||||||||||||    
T  11067630 tatgatgtgtggagcaaaggaaagtagtaaccaata 11067595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 14633646 - 14633701
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||| ||| ||||||||||| ||||||||||||||||||||||||    
T  14633646 aaaatcacaccaatacaaactatgatgtgtgaagcaaaggaaagtagtaaccaata 14633701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 17057187 - 17057242
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||| ||| |||||||||| |||||||||||||||||||||||||    
T  17057187 aaaatcacaccaatacaaaatatgatgtgtagagcaaaggaaagtagtaaccaata 17057242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 17085170 - 17085225
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||| ||| |||||||||| |||||||||||||||||||||||||    
T  17085170 aaaatcacaccaatacaaaatatgatgtgtagagcaaaggaaagtagtaaccaata 17085225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 247
Target Start/End: Original strand, 33162292 - 33162327
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||||||||||||||||||||||||||||||||    
T  33162292 tatgatgtgtggagcaaaggaaagtagtaaccaata 33162327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 247
Target Start/End: Original strand, 36205503 - 36205538
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||||||||||||||||||||||||||||||||    
T  36205503 tatgatgtgtggagcaaaggaaagtagtaaccaata 36205538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 36773908 - 36773853
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||| ||| |||||||||||||||||| |||||||||||||||||    
T  36773908 aaaatcacaccaatacaaactatgatgtgtggagcaaatgaaagtagtaaccaata 36773853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 38312590 - 38312535
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||| |||  |||||||||||||||||||||||||||||||||||    
T  38312590 aaaatcacaccaatataaacaatgatgtgtggagcaaaggaaagtagtaaccaata 38312535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 246
Target Start/End: Complemental strand, 39285185 - 39285130
Alignment:
Q  191 taaaaatcaaaccaataaaattatgatgtgtggagcaaaggaaagtagtaaccaat 246  Q
    ||||| ||| ||||||| || ||||||||||||||||||| |||||||||||||||    
T  39285185 taaaactcataccaatacaactatgatgtgtggagcaaagaaaagtagtaaccaat 39285130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 2334236 - 2334290
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaat 246  Q
    ||||||| ||||||| ||| ||||||||||| |||||||||||||||||||||||    
T  2334236 aaaatcacaccaatacaaactatgatgtgtgaagcaaaggaaagtagtaaccaat 2334290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 11690838 - 11690782
Alignment:
Q  192 aaaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    |||| ||| ||||||| ||| ||||||||||||||||||||||||||||||| ||||    
T  11690838 aaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaactaata 11690782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 30833678 - 30833646
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaacca 244  Q
    |||||||||||||||||||||||||||||||||    
T  30833678 tatgatgtgtggagcaaaggaaagtagtaacca 30833646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 216 - 247
Target Start/End: Original strand, 12123434 - 12123465
Alignment:
Q  216 atgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||||||||||||||||||||||||||||    
T  12123434 atgtgtggagcaaaggaaagtagtaaccaata 12123465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 24885935 - 24885880
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||| ||| ||||||||||| ||||||||||| ||||||||||||    
T  24885935 aaaatcacaccaatacaaactatgatgtgtgtagcaaaggaaaatagtaaccaata 24885880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 247
Target Start/End: Original strand, 4502952 - 4503006
Alignment:
Q  194 aaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    |||||| ||||||| ||| ||| |||||||||| |||||||||||||||||||||    
T  4502952 aaatcacaccaatacaaactataatgtgtggagtaaaggaaagtagtaaccaata 4503006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 13122108 - 13122054
Alignment:
Q  193 aaaatcaaaccaataaaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| |||||||||| |||||||||||||| |||| |||||| ||| |||||    
T  13122108 aaaatcacaccaataaaactatgatgtgtggagtaaagaaaagtactaatcaata 13122054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 201 - 246
Target Start/End: Original strand, 7815113 - 7815157
Alignment:
Q  201 accaataaaattatgatgtgtggagcaaaggaaagtagtaaccaat 246  Q
    ||||||||| |||| |||||| ||||||||||||||||||||||||    
T  7815113 accaataaacttat-atgtgtagagcaaaggaaagtagtaaccaat 7815157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 215 - 244
Target Start/End: Complemental strand, 32289895 - 32289866
Alignment:
Q  215 gatgtgtggagcaaaggaaagtagtaacca 244  Q
    ||||||||||||||||||||||||||||||    
T  32289895 gatgtgtggagcaaaggaaagtagtaacca 32289866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 2838295 - 2838243
Alignment:
Q  192 aaaaatcaaaccaataaaattatgatgtgtggagcaaaggaaagtagtaacca 244  Q
    |||| ||| |||||||| | | |||||||||||| ||||||||||||||||||    
T  2838295 aaaactcacaccaataatactttgatgtgtggagtaaaggaaagtagtaacca 2838243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 6e-18; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 2074901 - 2074955
Alignment:
Q  193 aaaatcaaaccaataaaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  2074901 aaaatcacaccaataaaactatgatgtgtggagcaaaggaaagtagtaaccaata 2074955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 40735732 - 40735677
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  40735732 aaaatcacaccaatacaaattatgatgtgtggagcaaaggaaagtagtaaccaata 40735677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 9635942 - 9635997
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  9635942 aaaatcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaata 9635997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 22834825 - 22834880
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  22834825 aaaatcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaata 22834880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 32891440 - 32891385
Alignment:
Q  192 aaaaatcaaaccaataaaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    |||| ||| |||||| ||| ||||||||||||||||||||||||||||||||||||    
T  32891440 aaaactcacaccaatgaaactatgatgtgtggagcaaaggaaagtagtaaccaata 32891385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 40734847 - 40734792
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  40734847 aaaatcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaata 40734792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 27305537 - 27305590
Alignment:
Q  193 aaaatcaaaccaataaaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||||| | |||||||||||||||||||||||||||||||||||    
T  27305537 aaaatcacaccaataaact-atgatgtgtggagcaaaggaaagtagtaaccaata 27305590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 761193 - 761141
Alignment:
Q  194 aaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaa 245  Q
    |||||| ||||||| ||| ||||||||||||||||||||||||||||||||||    
T  761193 aaatcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaa 761141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 247
Target Start/End: Original strand, 5257982 - 5258017
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||||||||||||||||||||||||||||||||    
T  5257982 tatgatgtgtggagcaaaggaaagtagtaaccaata 5258017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 247
Target Start/End: Original strand, 5260161 - 5260196
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||||||||||||||||||||||||||||||||    
T  5260161 tatgatgtgtggagcaaaggaaagtagtaaccaata 5260196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 247
Target Start/End: Complemental strand, 7762596 - 7762561
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||||||||||||||||||||||||||||||||    
T  7762596 tatgatgtgtggagcaaaggaaagtagtaaccaata 7762561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 9581633 - 9581578
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||| ||| ||||||||||| ||||||||||||||||||||||||    
T  9581633 aaaatcacaccaatataaactatgatgtgtgaagcaaaggaaagtagtaaccaata 9581578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 9666288 - 9666343
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||| ||| |||||| |||||||||||||||||||||||||||||    
T  9666288 aaaatcacaccaatacaaactatgatctgtggagcaaaggaaagtagtaaccaata 9666343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 247
Target Start/End: Original strand, 29196228 - 29196263
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||||||||||||||||||||||||||||||||    
T  29196228 tatgatgtgtggagcaaaggaaagtagtaaccaata 29196263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 247
Target Start/End: Complemental strand, 37407019 - 37406984
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||||||||||||||||||||||||||||||||    
T  37407019 tatgatgtgtggagcaaaggaaagtagtaaccaata 37406984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 247
Target Start/End: Complemental strand, 37408789 - 37408754
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||||||||||||||||||||||||||||||||    
T  37408789 tatgatgtgtggagcaaaggaaagtagtaaccaata 37408754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 246
Target Start/End: Original strand, 39153182 - 39153237
Alignment:
Q  192 aaaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaat 246  Q
    |||| ||| ||||||| ||| |||||||||||||||||||||||||||||||||||    
T  39153182 aaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaat 39153237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 192 - 241
Target Start/End: Complemental strand, 29682707 - 29682657
Alignment:
Q  192 aaaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaa 241  Q
    |||||||| ||||||| ||| ||||||||||||||||||||||||||||||    
T  29682707 aaaaatcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaa 29682657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 801420 - 801388
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaacca 244  Q
    |||||||||||||||||||||||||||||||||    
T  801420 tatgatgtgtggagcaaaggaaagtagtaacca 801388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 9634640 - 9634694
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||| ||| |||||| |||||||||||||||||||||||||||||    
T  9634640 aaaatcacaccaatacaaactatgat-tgtggagcaaaggaaagtagtaaccaata 9634694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 212 - 247
Target Start/End: Original strand, 19683726 - 19683761
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    |||||||| |||||||||||||||||||||||||||    
T  19683726 tatgatgtttggagcaaaggaaagtagtaaccaata 19683761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 21350829 - 21350884
Alignment:
Q  192 aaaaatcaaaccaataaaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    |||| ||| |||||| |||| | |||||||| ||||||||||||||||||||||||    
T  21350829 aaaactcacaccaatgaaataaagatgtgtgaagcaaaggaaagtagtaaccaata 21350884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 212 - 247
Target Start/End: Original strand, 23197782 - 23197817
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    |||||| |||||||||||||||||||||||||||||    
T  23197782 tatgatatgtggagcaaaggaaagtagtaaccaata 23197817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 212 - 247
Target Start/End: Original strand, 23199975 - 23200010
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    |||||| |||||||||||||||||||||||||||||    
T  23199975 tatgatatgtggagcaaaggaaagtagtaaccaata 23200010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 246
Target Start/End: Complemental strand, 29811219 - 29811164
Alignment:
Q  192 aaaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaat 246  Q
    |||| ||| ||||||| ||| |||||| ||||||||||||||||||||||||||||    
T  29811219 aaaactcacaccaatacaaaatatgatttgtggagcaaaggaaagtagtaaccaat 29811164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 212 - 247
Target Start/End: Complemental strand, 45095493 - 45095458
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    |||||||||| |||||||||||||||||||||||||    
T  45095493 tatgatgtgtagagcaaaggaaagtagtaaccaata 45095458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 51351959 - 51352013
Alignment:
Q  193 aaaatcaaaccaataaaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| | |||||| | || |||||||||||||||||||||| ||||||||||    
T  51351959 aaaatcacatcaataatactacgatgtgtggagcaaaggaaagtggtaaccaata 51352013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 216 - 245
Target Start/End: Complemental strand, 16499340 - 16499311
Alignment:
Q  216 atgtgtggagcaaaggaaagtagtaaccaa 245  Q
    ||||||||||||||||||||||||||||||    
T  16499340 atgtgtggagcaaaggaaagtagtaaccaa 16499311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 23391730 - 23391786
Alignment:
Q  192 aaaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    |||| ||| ||||||| ||| |||||||||||||| ||||||||||| |||||||||    
T  23391730 aaaactcacaccaatacaaactatgatgtgtggagaaaaggaaagtaataaccaata 23391786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 29813412 - 29813356
Alignment:
Q  192 aaaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    |||| ||| ||||||| ||| ||||||||||||||||||| ||||||||||| ||||    
T  29813412 aaaactcacaccaatacaaactatgatgtgtggagcaaagaaaagtagtaactaata 29813356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 247
Target Start/End: Complemental strand, 31314810 - 31314735
Alignment:
Q  175 attgttgtgaat--cgaataaaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||||||||  ||| | ||||||| ||||||| ||| |||||||| ||||||||||||||||| |||| ||||    
T  31314810 attgttgtgaataccgactcaaaatcacaccaatacaaactatgatgtatggagcaaaggaaagtaataactaata 31314735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 23344314 - 23344260
Alignment:
Q  193 aaaatcaaaccaataaaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| | |||||||| ||||||||||||||||||||||||||||||||||||    
T  23344314 aaaatcacatcaataaaactatgatgtgtggagcaaaggaaagtagtaaccaata 23344260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 247
Target Start/End: Complemental strand, 4179122 - 4179068
Alignment:
Q  194 aaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    |||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  4179122 aaatcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaata 4179068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 23555392 - 23555336
Alignment:
Q  192 aaaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    |||| ||| ||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  23555392 aaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaata 23555336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 47675954 - 47676010
Alignment:
Q  192 aaaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    |||| ||| ||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  47675954 aaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaata 47676010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 208 - 247
Target Start/End: Original strand, 495822 - 495861
Alignment:
Q  208 aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  495822 aaattatgatatgtggagcaaaggaaagtagtaaccaata 495861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 25616205 - 25616150
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||| ||| |||||||| |||||||||||||||||||||||||||    
T  25616205 aaaatcacaccaatacaaactatgatgtatggagcaaaggaaagtagtaaccaata 25616150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 208 - 247
Target Start/End: Complemental strand, 27348151 - 27348112
Alignment:
Q  208 aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  27348151 aaattatgatgtgtggagcaaaggaaagtagcaaccaata 27348112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 31105218 - 31105273
Alignment:
Q  192 aaaaatcaaaccaataaaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    |||| ||| |||||||||| |||||||||||||| ||||||||||||||| |||||    
T  31105218 aaaactcacaccaataaaactatgatgtgtggagtaaaggaaagtagtaatcaata 31105273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 247
Target Start/End: Complemental strand, 35854246 - 35854211
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||||||||||||||||||||||||||||||||    
T  35854246 tatgatgtgtggagcaaaggaaagtagtaaccaata 35854211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 247
Target Start/End: Original strand, 36146250 - 36146285
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||||||||||||||||||||||||||||||||    
T  36146250 tatgatgtgtggagcaaaggaaagtagtaaccaata 36146285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 41648832 - 41648887
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||| ||| ||||||||||||||||||||||||||||||| ||||    
T  41648832 aaaatcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaactaata 41648887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 247
Target Start/End: Complemental strand, 48409137 - 48409102
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||||||||||||||||||||||||||||||||    
T  48409137 tatgatgtgtggagcaaaggaaagtagtaaccaata 48409102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 247
Target Start/End: Complemental strand, 48489761 - 48489726
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||||||||||||||||||||||||||||||||    
T  48489761 tatgatgtgtggagcaaaggaaagtagtaaccaata 48489726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 212 - 246
Target Start/End: Complemental strand, 19502508 - 19502474
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaat 246  Q
    |||||||||||||||||||||||||||||||||||    
T  19502508 tatgatgtgtggagcaaaggaaagtagtaaccaat 19502474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 242
Target Start/End: Original strand, 14069651 - 14069702
Alignment:
Q  192 aaaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaac 242  Q
    |||| ||| ||||||| ||| |||||||||||||||||||||||||||||||    
T  14069651 aaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaac 14069702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 242
Target Start/End: Original strand, 14379679 - 14379730
Alignment:
Q  192 aaaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaac 242  Q
    |||| ||| ||||||| ||| |||||||||||||||||||||||||||||||    
T  14379679 aaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaac 14379730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 212 - 247
Target Start/End: Original strand, 25766795 - 25766830
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||||||||||||||| ||||||||||||||||    
T  25766795 tatgatgtgtggagcaaagaaaagtagtaaccaata 25766830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 212 - 247
Target Start/End: Complemental strand, 29991383 - 29991348
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||||||||||||||| ||||||||||||||||    
T  29991383 tatgatgtgtggagcaaagaaaagtagtaaccaata 29991348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 212 - 247
Target Start/End: Original strand, 41317277 - 41317312
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    |||||||| |||||||||||||||||||||||||||    
T  41317277 tatgatgtttggagcaaaggaaagtagtaaccaata 41317312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 246
Target Start/End: Complemental strand, 4586491 - 4586457
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaat 246  Q
    ||||||||||||||||||||||||| |||||||||    
T  4586491 tatgatgtgtggagcaaaggaaagtggtaaccaat 4586457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 246
Target Start/End: Original strand, 31732807 - 31732841
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaat 246  Q
    |||||||||||||||||| ||||||||||||||||    
T  31732807 tatgatgtgtggagcaaatgaaagtagtaaccaat 31732841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 38671043 - 38671093
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaac 242  Q
    ||||||| ||||||| ||| ||||||||||||||||||||||| |||||||    
T  38671043 aaaatcacaccaatacaaactatgatgtgtggagcaaaggaaaatagtaac 38671093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 18126997 - 18126941
Alignment:
Q  192 aaaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    |||| ||| ||||||| ||| |||||||||||||| ||||||||||||||| |||||    
T  18126997 aaaactcacaccaatacaaactatgatgtgtggagtaaaggaaagtagtaatcaata 18126941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 26417667 - 26417611
Alignment:
Q  192 aaaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    |||| ||| ||||||| ||| |||||| ||||||| |||||||||||||||||||||    
T  26417667 aaaactcacaccaatacaaactatgatatgtggagtaaaggaaagtagtaaccaata 26417611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 247
Target Start/End: Original strand, 30843299 - 30843358
Alignment:
Q  188 gaataaaaatcaaaccaataaaattatgatgtgtggagcaaa-ggaaagtagtaaccaata 247  Q
    |||| ||||||| ||||||||| ||| || |||||||||||| ||||||||||||||||||    
T  30843299 gaatcaaaatcacaccaataaactta-gaagtgtggagcaaaaggaaagtagtaaccaata 30843358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 47673762 - 47673818
Alignment:
Q  192 aaaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    |||| ||| ||||||| ||| ||||||||||||| |||| |||||||||||||||||    
T  47673762 aaaactcacaccaatacaaactatgatgtgtggaacaaaagaaagtagtaaccaata 47673818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 5689617 - 5689562
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  5689617 aaaatcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaata 5689562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 30143690 - 30143635
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  30143690 aaaatcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaata 30143635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 41366436 - 41366491
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  41366436 aaaatcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaata 41366491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 15213137 - 15213081
Alignment:
Q  192 aaaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    |||| ||| ||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  15213137 aaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaata 15213081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 34254148 - 34254204
Alignment:
Q  192 aaaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||| || ||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  34254148 aaaaaacacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaata 34254204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 34256324 - 34256380
Alignment:
Q  192 aaaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||| || ||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  34256324 aaaaaacacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaata 34256380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 6599315 - 6599260
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||| ||| |||||||||| |||||||||||||||||||||||||    
T  6599315 aaaatcacaccaatacaaactatgatgtgtagagcaaaggaaagtagtaaccaata 6599260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 6674768 - 6674713
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||| ||| |||||||||| |||||||||||||||||||||||||    
T  6674768 aaaatcacaccaatacaaactatgatgtgtagagcaaaggaaagtagtaaccaata 6674713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 247
Target Start/End: Original strand, 12702469 - 12702504
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||||||||||||||||||||||||||||||||    
T  12702469 tatgatgtgtggagcaaaggaaagtagtaaccaata 12702504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 247
Target Start/End: Original strand, 19491529 - 19491576
Alignment:
Q  200 aaccaataaaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  19491529 aaccaataaaactatgatgtgtggagcaaaggaaagtattaatcaata 19491576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 19945177 - 19945232
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||| ||| | ||||||||||||||||||||||||||||||||||    
T  19945177 aaaatcacaccaatacaaactttgatgtgtggagcaaaggaaagtagtaaccaata 19945232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 33352500 - 33352445
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||| |||||||||| ||||||||||||||||||| |||||||||    
T  33352500 aaaatcacaccaatataaattatgatatgtggagcaaaggaaagtaataaccaata 33352445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 42498545 - 42498490
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||| ||| ||||||||||||||||||||||||||| ||||||||    
T  42498545 aaaatcacaccaatacaaaatatgatgtgtggagcaaaggaaagtagcaaccaata 42498490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 247
Target Start/End: Complemental strand, 44304185 - 44304150
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||||||||||||||||||||||||||||||||    
T  44304185 tatgatgtgtggagcaaaggaaagtagtaaccaata 44304150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 213 - 247
Target Start/End: Complemental strand, 4734035 - 4734001
Alignment:
Q  213 atgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    |||||||||||||||||||||||||||||||||||    
T  4734035 atgatgtgtggagcaaaggaaagtagtaaccaata 4734001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 194 - 247
Target Start/End: Complemental strand, 17983002 - 17982948
Alignment:
Q  194 aaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    |||||| ||||||| ||| |||||||||||||||||||||| |||||||||||||    
T  17983002 aaatcacaccaatacaaactatgatgtgtggagcaaaggaacgtagtaaccaata 17982948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 194 - 247
Target Start/End: Complemental strand, 31218606 - 31218552
Alignment:
Q  194 aaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    |||||| ||||||| ||| ||||||||||||||||||||||||||| ||||||||    
T  31218606 aaatcacaccaatataaactatgatgtgtggagcaaaggaaagtagcaaccaata 31218552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 7493336 - 7493284
Alignment:
Q  193 aaaatcaaaccaataaaattatgatgtgtggagcaaaggaaagtagtaaccaat 246  Q
    ||||||| |||||||||| |||||||||||||||||||| ||||||||| ||||    
T  7493336 aaaatcacaccaataaaactatgatgtgtggagcaaagg-aagtagtaatcaat 7493284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 213 - 246
Target Start/End: Complemental strand, 43036751 - 43036718
Alignment:
Q  213 atgatgtgtggagcaaaggaaagtagtaaccaat 246  Q
    ||||||||||||||||||||||||||||||||||    
T  43036751 atgatgtgtggagcaaaggaaagtagtaaccaat 43036718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 4732029 - 4731957
Alignment:
Q  174 aattgttgtgaat-cgaa-taaaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaacc 243  Q
    ||||||||||||| |||| | ||||||| ||||||| |||  |||||||||||||||||||||||||||||||    
T  4732029 aattgttgtgaattcgaactcaaaatcacaccaatacaaacaatgatgtgtggagcaaaggaaagtagtaacc 4731957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 212 - 247
Target Start/End: Original strand, 1746057 - 1746092
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    |||||||||||||| |||||||||||||||||||||    
T  1746057 tatgatgtgtggagtaaaggaaagtagtaaccaata 1746092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 212 - 247
Target Start/End: Original strand, 3303509 - 3303544
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||||||||||||||||||||| ||||||||||    
T  3303509 tatgatgtgtggagcaaaggaaagtggtaaccaata 3303544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 212 - 247
Target Start/End: Original strand, 18105914 - 18105949
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    |||||||||| |||||||||||||||||||||||||    
T  18105914 tatgatgtgtagagcaaaggaaagtagtaaccaata 18105949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 212 - 247
Target Start/End: Complemental strand, 27811608 - 27811573
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    |||||||||||||| |||||||||||||||||||||    
T  27811608 tatgatgtgtggaggaaaggaaagtagtaaccaata 27811573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 8154129 - 8154075
Alignment:
Q  193 aaaatcaaaccaataaaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| || ||||||| ||||||||||| || ||||||||||||||| |||||    
T  8154129 aaaatcacactaataaaactatgatgtgtgaagtaaaggaaagtagtaatcaata 8154075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 8965510 - 8965563
Alignment:
Q  193 aaaatcaaaccaataaaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| |||||||||| ||||||| ||||||||| |||| |||||||||||||    
T  8965510 aaaatcacaccaataaaactatgatgcgtggagcaa-ggaacgtagtaaccaata 8965563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 215 - 244
Target Start/End: Complemental strand, 2628066 - 2628037
Alignment:
Q  215 gatgtgtggagcaaaggaaagtagtaacca 244  Q
    ||||||||||||||||||||||||||||||    
T  2628066 gatgtgtggagcaaaggaaagtagtaacca 2628037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 241
Target Start/End: Original strand, 6127872 - 6127909
Alignment:
Q  204 aataaaattatgatgtgtggagcaaaggaaagtagtaa 241  Q
    ||||||| ||||||||||||| ||||||||||||||||    
T  6127872 aataaaactatgatgtgtggaacaaaggaaagtagtaa 6127909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 219 - 247
Target Start/End: Original strand, 1345221 - 1345249
Alignment:
Q  219 tgtggagcaaaggaaagtagtaaccaata 247  Q
    |||||||||||||||||||||||||||||    
T  1345221 tgtggagcaaaggaaagtagtaaccaata 1345249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 192 - 246
Target Start/End: Original strand, 28750473 - 28750528
Alignment:
Q  192 aaaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaat 246  Q
    |||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  28750473 aaaactcacaccaatacaaattatgatgtgtggagcaaaggaaagtagtaaccaat 28750528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 16409829 - 16409777
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaacca 244  Q
    ||||||| ||||||| ||| |||||||||||||||||||||||||||||||||    
T  16409829 aaaatcacaccaatacaaagtatgatgtgtggagcaaaggaaagtagtaacca 16409777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 16649653 - 16649705
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaacca 244  Q
    ||||||| ||||||| ||| |||||||||||||||||||||||||||||||||    
T  16649653 aaaatcataccaatacaaactatgatgtgtggagcaaaggaaagtagtaacca 16649705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 30682740 - 30682796
Alignment:
Q  192 aaaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    |||| ||| ||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  30682740 aaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaata 30682796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 42428248 - 42428304
Alignment:
Q  192 aaaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    |||| ||| ||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  42428248 aaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaata 42428304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 246
Target Start/End: Complemental strand, 534109 - 534054
Alignment:
Q  192 aaaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaat 246  Q
    |||| ||| ||||||| ||| |||||||||||||||||||||||||||||||||||    
T  534109 aaaactcacaccaatagaaactatgatgtgtggagcaaaggaaagtagtaaccaat 534054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 5887253 - 5887308
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||| ||| |||||| |||||||||||||||||||||||||||||    
T  5887253 aaaatcacaccaatacaaactatgatatgtggagcaaaggaaagtagtaaccaata 5887308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 247
Target Start/End: Original strand, 8565786 - 8565821
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||||||||||||||||||||||||||||||||    
T  8565786 tatgatgtgtggagcaaaggaaagtagtaaccaata 8565821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 247
Target Start/End: Complemental strand, 13343390 - 13343355
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||||||||||||||||||||||||||||||||    
T  13343390 tatgatgtgtggagcaaaggaaagtagtaaccaata 13343355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 247
Target Start/End: Complemental strand, 30182918 - 30182883
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||||||||||||||||||||||||||||||||    
T  30182918 tatgatgtgtggagcaaaggaaagtagtaaccaata 30182883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 247
Target Start/End: Original strand, 39468387 - 39468422
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||||||||||||||||||||||||||||||||    
T  39468387 tatgatgtgtggagcaaaggaaagtagtaaccaata 39468422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 212 - 245
Target Start/End: Complemental strand, 33832008 - 33831975
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaa 245  Q
    ||||||||||||||||||||||||||||||||||    
T  33832008 tatgatgtgtggagcaaaggaaagtagtaaccaa 33831975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 3075567 - 3075623
Alignment:
Q  192 aaaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    |||| ||| ||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  3075567 aaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtaataaccaata 3075623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 9789060 - 9789092
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaacca 244  Q
    |||||||||||||||||||||||||||||||||    
T  9789060 tatgatgtgtggagcaaaggaaagtagtaacca 9789092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 36073860 - 36073916
Alignment:
Q  192 aaaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||| || ||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  36073860 aaaaaccacaccaatacaaactatgatgtgtggagcaaaggaaagtaataaccaata 36073916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 246
Target Start/End: Complemental strand, 538371 - 538316
Alignment:
Q  192 aaaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaat 246  Q
    |||| ||| ||||||| ||| |||||||||||||||||||||||||| ||||||||    
T  538371 aaaactcacaccaatataaactatgatgtgtggagcaaaggaaagtaataaccaat 538316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 31183323 - 31183268
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||| |||  |||||||||||||||||||||||||||||| ||||    
T  31183323 aaaatcacaccaatacaaaccatgatgtgtggagcaaaggaaagtagtaactaata 31183268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 212 - 247
Target Start/End: Original strand, 42426074 - 42426109
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    |||||||||||||||||| |||||||||||||||||    
T  42426074 tatgatgtgtggagcaaaagaaagtagtaaccaata 42426109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 246
Target Start/End: Complemental strand, 13240081 - 13240047
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaat 246  Q
    |||||||||||||| ||||||||||||||||||||    
T  13240081 tatgatgtgtggagtaaaggaaagtagtaaccaat 13240047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 246
Target Start/End: Complemental strand, 19806692 - 19806658
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaat 246  Q
    |||||||||||| ||||||||||||||||||||||    
T  19806692 tatgatgtgtggggcaaaggaaagtagtaaccaat 19806658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 215 - 244
Target Start/End: Original strand, 18441483 - 18441512
Alignment:
Q  215 gatgtgtggagcaaaggaaagtagtaacca 244  Q
    ||||||||||||||||||||||||||||||    
T  18441483 gatgtgtggagcaaaggaaagtagtaacca 18441512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 215 - 244
Target Start/End: Complemental strand, 26178213 - 26178184
Alignment:
Q  215 gatgtgtggagcaaaggaaagtagtaacca 244  Q
    ||||||||||||||||||||||||||||||    
T  26178213 gatgtgtggagcaaaggaaagtagtaacca 26178184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 29999647 - 29999702
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  29999647 aaaatcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaata 29999702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 34570232 - 34570287
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  34570232 aaaatcacaccaatataaactatgatgtgtggagcaaaggaaagtagtaaccaata 34570287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 48143398 - 48143343
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  48143398 aaaatcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaata 48143343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 48893461 - 48893516
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  48893461 aaaatcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaata 48893516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 52082481 - 52082536
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  52082481 aaaatcacaccaatacaaattatgatgtgtggaacaaaggaaagtagtaaccaata 52082536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 56178454 - 56178509
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  56178454 aaaatcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaata 56178509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 247
Target Start/End: Original strand, 13992129 - 13992164
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||||||||||||||||||||||||||||||||    
T  13992129 tatgatgtgtggagcaaaggaaagtagtaaccaata 13992164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 246
Target Start/End: Original strand, 26175454 - 26175509
Alignment:
Q  192 aaaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaat 246  Q
    |||| ||| ||||||| ||| |||||||||||||||||||||||||||||||||||    
T  26175454 aaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaat 26175509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 45687005 - 45687060
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||| ||| |||||||| |||||||||||||||||||||||||||    
T  45687005 aaaatcacaccaatacaaactatgatgtatggagcaaaggaaagtagtaaccaata 45687060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 247
Target Start/End: Original strand, 46147234 - 46147269
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||||||||||||||||||||||||||||||||    
T  46147234 tatgatgtgtggagcaaaggaaagtagtaaccaata 46147269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 47038234 - 47038289
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||| ||| ||||||||||||| ||||||||||||||||||||||    
T  47038234 aaaatcacaccaatacaaactatgatgtgtggaacaaaggaaagtagtaaccaata 47038289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 37229547 - 37229601
Alignment:
Q  193 aaaatcaaaccaataaaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||| |||||||||||| |||| |||||||||||| || |||||||||||||||    
T  37229547 aaaataaaaccaataaaactatgttgtgtggagcaatgggaagtagtaaccaata 37229601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 214 - 247
Target Start/End: Complemental strand, 5872145 - 5872112
Alignment:
Q  214 tgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||||||||||||||||||||||||||||||    
T  5872145 tgatgtgtggagcaaaggaaagtagtaaccaata 5872112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 247
Target Start/End: Original strand, 48142206 - 48142259
Alignment:
Q  194 aaatcaaaccaataaaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    |||||| |||||||||| |  ||||||||||||||||||||||| |||||||||    
T  48142206 aaatcacaccaataaaacttagatgtgtggagcaaaggaaagtaataaccaata 48142259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 241
Target Start/End: Original strand, 5207669 - 5207717
Alignment:
Q  193 aaaatcaaaccaataaaattatgatgtgtggagcaaaggaaagtagtaa 241  Q
    ||||||| ||||||| || |||| |||||||||||||||||||||||||    
T  5207669 aaaatcacaccaatataaatatggtgtgtggagcaaaggaaagtagtaa 5207717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 31495142 - 31495174
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaacca 244  Q
    |||||||||||||||||||||||||||||||||    
T  31495142 tatgatgtgtggagcaaaggaaagtagtaacca 31495174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 5369900 - 5369955
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||| ||| |||||||||||||| ||||||||||||||| |||||    
T  5369900 aaaatcacaccaatacaaactatgatgtgtggagtaaaggaaagtagtaatcaata 5369955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 212 - 247
Target Start/End: Original strand, 9927297 - 9927332
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    |||||||||||||||||||||||||||| |||||||    
T  9927297 tatgatgtgtggagcaaaggaaagtagttaccaata 9927332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 246
Target Start/End: Original strand, 12743746 - 12743801
Alignment:
Q  192 aaaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaat 246  Q
    |||| ||| ||||||| ||| |||| ||||||||||||||||||||||||||||||    
T  12743746 aaaactcacaccaatacaaactatgttgtgtggagcaaaggaaagtagtaaccaat 12743801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 247
Target Start/End: Original strand, 6542027 - 6542060
Alignment:
Q  214 tgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    |||||||||||||||||||||||| |||||||||    
T  6542027 tgatgtgtggagcaaaggaaagtaataaccaata 6542060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 4588301 - 4588249
Alignment:
Q  192 aaaaatcaaaccaataaaattatgatgtgtggagcaaaggaaagtagtaacca 244  Q
    |||| ||| |||||||| | | ||||||||||||||||||||| |||||||||    
T  4588301 aaaactcacaccaataatactttgatgtgtggagcaaaggaaaatagtaacca 4588249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 37740976 - 37740920
Alignment:
Q  192 aaaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    |||| ||| ||||||| ||| |||||||||||||||| ||||||||||||| |||||    
T  37740976 aaaactcacaccaatacaaactatgatgtgtggagcacaggaaagtagtaatcaata 37740920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 52467175 - 52467231
Alignment:
Q  192 aaaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    |||| ||| ||||||| ||| ||||||||||| ||||||||||||| ||||||||||    
T  52467175 aaaactcacaccaatacaaactatgatgtgtgaagcaaaggaaagtggtaaccaata 52467231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 54199726 - 54199778
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaacca 244  Q
    ||||||| ||||||| |||  ||||||| ||||||||||||||||||||||||    
T  54199726 aaaatcacaccaatacaaacgatgatgtatggagcaaaggaaagtagtaacca 54199778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 833988 - 834043
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  833988 aaaatcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaata 834043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 8550602 - 8550657
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  8550602 aaaatcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaata 8550657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 192 - 246
Target Start/End: Original strand, 13137798 - 13137853
Alignment:
Q  192 aaaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaat 246  Q
    |||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  13137798 aaaactcacaccaatacaaattatgatgtgtggagcaaaggaaagtagtaaccaat 13137853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 49918700 - 49918645
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  49918700 aaaatcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaata 49918645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 208 - 247
Target Start/End: Original strand, 196744 - 196783
Alignment:
Q  208 aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  196744 aaattatgatgtgtggagcaaaggaaaatagtaaccaata 196783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 247
Target Start/End: Complemental strand, 3157195 - 3157160
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||||||||||||||||||||||||||||||||    
T  3157195 tatgatgtgtggagcaaaggaaagtagtaaccaata 3157160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 20763018 - 20762963
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  20763018 aaaatcacaccaatacaaactatgatgtgtggagcaaaggaaagtattaaccaata 20762963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 40122019 - 40122074
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||| ||| ||||||| ||||||||||||||||||||||||||||    
T  40122019 aaaatcacaccaatacaaactatgatgcgtggagcaaaggaaagtagtaaccaata 40122074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 247
Target Start/End: Complemental strand, 41361252 - 41361205
Alignment:
Q  200 aaccaataaaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  41361252 aaccaataaaactatgatgtgtggagcaaaggaaagtattaatcaata 41361205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 247
Target Start/End: Original strand, 45644196 - 45644231
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||||||||||||||||||||||||||||||||    
T  45644196 tatgatgtgtggagcaaaggaaagtagtaaccaata 45644231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 247
Target Start/End: Original strand, 50167018 - 50167053
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||||||||||||||||||||||||||||||||    
T  50167018 tatgatgtgtggagcaaaggaaagtagtaaccaata 50167053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 3189694 - 3189640
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaat 246  Q
    ||||||| ||||||| ||| |||||||| ||||||||||||||||||||||||||    
T  3189694 aaaatcacaccaatataaactatgatgtctggagcaaaggaaagtagtaaccaat 3189640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 3198511 - 3198457
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaat 246  Q
    ||||||| ||||||| ||| |||||||| ||||||||||||||||||||||||||    
T  3198511 aaaatcacaccaatataaactatgatgtctggagcaaaggaaagtagtaaccaat 3198457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 3207350 - 3207296
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaat 246  Q
    ||||||| ||||||| ||| |||||||| ||||||||||||||||||||||||||    
T  3207350 aaaatcacaccaatataaactatgatgtctggagcaaaggaaagtagtaaccaat 3207296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 20622071 - 20622103
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaacca 244  Q
    |||||||||||||||||||||||||||||||||    
T  20622071 tatgatgtgtggagcaaaggaaagtagtaacca 20622103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 28223239 - 28223295
Alignment:
Q  192 aaaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    |||| ||| ||||||| ||| |||||||||||||||||| |||||||||||||||||    
T  28223239 aaaactcagaccaatacaaactatgatgtgtggagcaaacgaaagtagtaaccaata 28223295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 37559682 - 37559738
Alignment:
Q  192 aaaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    |||| ||| ||||||| ||| |||||||| |||||||||||||||||||||||||||    
T  37559682 aaaactcacaccaatataaactatgatgtctggagcaaaggaaagtagtaaccaata 37559738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 51765729 - 51765697
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaacca 244  Q
    |||||||||||||||||||||||||||||||||    
T  51765729 tatgatgtgtggagcaaaggaaagtagtaacca 51765697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 212 - 247
Target Start/End: Original strand, 3846959 - 3846994
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    |||||||||||||| |||||||||||||||||||||    
T  3846959 tatgatgtgtggagtaaaggaaagtagtaaccaata 3846994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 31659588 - 31659533
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||| ||| |||||||||||||| |||| ||||||||||||||||    
T  31659588 aaaatcacaccaatataaaatatgatgtgtggagaaaagaaaagtagtaaccaata 31659533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 44646633 - 44646687
Alignment:
Q  192 aaaaatcaaaccaataaaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||||  |||||||| ||| |||||||| ||||||||||||||||||||||||    
T  44646633 aaaaatcattccaataaactta-gatgtgtgtagcaaaggaaagtagtaaccaata 44646687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 50169033 - 50169088
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||| ||| ||||||||||| |||||| |||||||||||||||||    
T  50169033 aaaatcacaccaatacaaactatgatgtgtgaagcaaatgaaagtagtaaccaata 50169088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 247
Target Start/End: Complemental strand, 15820636 - 15820591
Alignment:
Q  201 accaataaaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||||| ||| |||||||||||||||||||||||||||| ||||    
T  15820636 accaataaactta-gatgtgtggagcaaaggaaagtagtaactaata 15820591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 216 - 245
Target Start/End: Original strand, 13659193 - 13659222
Alignment:
Q  216 atgtgtggagcaaaggaaagtagtaaccaa 245  Q
    ||||||||||||||||||||||||||||||    
T  13659193 atgtgtggagcaaaggaaagtagtaaccaa 13659222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000006; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 247
Target Start/End: Original strand, 9182856 - 9182904
Alignment:
Q  200 aaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  9182856 aaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaata 9182904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 247
Target Start/End: Original strand, 5408908 - 5408943
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||||||||||||||||||||||||||||||||    
T  5408908 tatgatgtgtggagcaaaggaaagtagtaaccaata 5408943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 247
Target Start/End: Original strand, 5413233 - 5413268
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||||||||||||||||||||||||||||||||    
T  5413233 tatgatgtgtggagcaaaggaaagtagtaaccaata 5413268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 28137229 - 28137284
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||| ||| ||||| ||||||||||||||||||||||||||||||    
T  28137229 aaaatcacaccaatacaaactatgacgtgtggagcaaaggaaagtagtaaccaata 28137284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 238
Target Start/End: Original strand, 257242 - 257308
Alignment:
Q  174 aattgttgtgaat-cgaa-taaaaatcaaaccaataaaattatgatgtgtggagcaaaggaaagtag 238  Q
    ||||||||||||| |||| | ||||||| ||||||| |||||| |||||||||||||||||||||||    
T  257242 aattgttgtgaattcgaactcaaaatcacaccaatataattataatgtgtggagcaaaggaaagtag 257308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 26954109 - 26954163
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaat 246  Q
    ||||||| ||||||| ||| |||||||||||||||||| ||||||||||||||||    
T  26954109 aaaatcacaccaatacaaactatgatgtgtggagcaaaagaaagtagtaaccaat 26954163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 33160169 - 33160223
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaat 246  Q
    ||||||| ||||||| ||| ||||||||||||||||||||||| |||||||||||    
T  33160169 aaaatcataccaatacaaactatgatgtgtggagcaaaggaaaatagtaaccaat 33160223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 412419 - 412387
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaacca 244  Q
    |||||||||||||||||||||||||||||||||    
T  412419 tatgatgtgtggagcaaaggaaagtagtaacca 412387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 2171365 - 2171397
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaacca 244  Q
    |||||||||||||||||||||||||||||||||    
T  2171365 tatgatgtgtggagcaaaggaaagtagtaacca 2171397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 3072595 - 3072627
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaacca 244  Q
    |||||||||||||||||||||||||||||||||    
T  3072595 tatgatgtgtggagcaaaggaaagtagtaacca 3072627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 3038745 - 3038800
Alignment:
Q  193 aaaatcaaaccaata-aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| ||||||| ||| |||||||||| ||||||||||||||| |||||||||    
T  3038745 aaaatcagaccaatacaaactatgatgtgtcgagcaaaggaaagtaataaccaata 3038800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 212 - 247
Target Start/End: Original strand, 9182828 - 9182863
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    |||||||||||||| |||||||||||||||||||||    
T  9182828 tatgatgtgtggagtaaaggaaagtagtaaccaata 9182863  T

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Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 212 - 247
Target Start/End: Original strand, 16452166 - 16452201
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    |||||||||||||| |||||||||||||||||||||    
T  16452166 tatgatgtgtggagtaaaggaaagtagtaaccaata 16452201  T

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Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 212 - 247
Target Start/End: Original strand, 30834372 - 30834407
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||||||||||||||||||| ||||||||||||    
T  30834372 tatgatgtgtggagcaaaggaaaatagtaaccaata 30834407  T

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Target: scaffold0016 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 114954 - 114898
Alignment:
Q  193 aaaatcaaaccaata--aaattatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    ||||||| |||||||  ||| |||||||||||||||||||||||||| |||||||||    
T  114954 aaaatcacaccaatacaaaactatgatgtgtggagcaaaggaaagtaataaccaata 114898  T

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Target: scaffold1668 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1668
Description:

Target: scaffold1668; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 1319 - 1375
Alignment:
Q  192 aaaaatcaaaccaataaaat-tatgatgtgtggagcaaaggaaagtagtaaccaata 247  Q
    |||| ||| ||||||| ||| |||||||||||||||||||||||||||||| |||||    
T  1319 aaaactcacaccaatacaatctatgatgtgtggagcaaaggaaagtagtaatcaata 1375  T

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Target: scaffold0286 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 11896 - 11864
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaacca 244  Q
    |||||||||||||||||||||||||||||||||    
T  11896 tatgatgtgtggagcaaaggaaagtagtaacca 11864  T

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Target: scaffold0002 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 434864 - 434832
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaacca 244  Q
    |||||||||||||||||||||||||||||||||    
T  434864 tatgatgtgtggagcaaaggaaagtagtaacca 434832  T

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Target: scaffold0491 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 246
Target Start/End: Original strand, 10997 - 11031
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaat 246  Q
    |||||| ||||||||||||||||||||||||||||    
T  10997 tatgatatgtggagcaaaggaaagtagtaaccaat 11031  T

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Target: scaffold0066 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 246
Target Start/End: Original strand, 20253 - 20287
Alignment:
Q  212 tatgatgtgtggagcaaaggaaagtagtaaccaat 246  Q
    |||||||||||||||||||||| ||||||||||||    
T  20253 tatgatgtgtggagcaaaggaaggtagtaaccaat 20287  T

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Target: scaffold0006 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 216 - 245
Target Start/End: Original strand, 148954 - 148983
Alignment:
Q  216 atgtgtggagcaaaggaaagtagtaaccaa 245  Q
    ||||||||||||||||||||||||||||||    
T  148954 atgtgtggagcaaaggaaagtagtaaccaa 148983  T

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