View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5718_low_22 (Length: 251)

Name: NF5718_low_22
Description: NF5718
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5718_low_22
NF5718_low_22
[»] chr3 (16 HSPs)
chr3 (167-251)||(13845465-13845549)
chr3 (167-249)||(35222975-35223057)
chr3 (167-251)||(55401110-55401194)
chr3 (207-251)||(2941593-2941637)
chr3 (168-251)||(15864868-15864950)
chr3 (167-251)||(40993275-40993359)
chr3 (168-250)||(8789489-8789573)
chr3 (166-251)||(20503500-20503585)
chr3 (166-251)||(25093537-25093622)
chr3 (206-251)||(3631719-3631764)
chr3 (167-232)||(15796223-15796288)
chr3 (167-251)||(26492145-26492229)
chr3 (221-251)||(49505148-49505178)
chr3 (167-232)||(25064972-25065037)
chr3 (169-251)||(28918036-28918120)
chr3 (166-250)||(8842365-8842449)
[»] chr8 (17 HSPs)
chr8 (168-251)||(43737752-43737835)
chr8 (167-251)||(3951476-3951560)
chr8 (167-238)||(34450961-34451032)
chr8 (169-251)||(3025586-3025668)
chr8 (167-251)||(33405324-33405408)
chr8 (166-233)||(26902103-26902170)
chr8 (212-249)||(126332-126369)
chr8 (171-239)||(4122182-4122250)
chr8 (167-251)||(4786278-4786362)
chr8 (167-238)||(22652035-22652106)
chr8 (169-251)||(926730-926812)
chr8 (167-238)||(6065586-6065657)
chr8 (167-238)||(28745557-28745628)
chr8 (167-225)||(18964251-18964309)
chr8 (167-232)||(8343381-8343446)
chr8 (167-248)||(24413499-24413580)
chr8 (168-237)||(29447040-29447109)
[»] chr2 (22 HSPs)
chr2 (166-241)||(24009340-24009415)
chr2 (167-251)||(20242667-20242751)
chr2 (167-231)||(36096304-36096368)
chr2 (167-223)||(18054716-18054772)
chr2 (167-238)||(35056927-35056998)
chr2 (167-249)||(34993922-34994004)
chr2 (168-251)||(28596504-28596587)
chr2 (169-251)||(2438661-2438743)
chr2 (167-251)||(15972908-15972992)
chr2 (166-238)||(34784910-34784982)
chr2 (167-235)||(42511322-42511390)
chr2 (167-238)||(4207915-4207986)
chr2 (166-229)||(26769579-26769642)
chr2 (217-251)||(5367227-5367261)
chr2 (167-245)||(19580225-19580303)
chr2 (167-232)||(41843500-41843565)
chr2 (164-232)||(11223790-11223857)
chr2 (167-251)||(18840953-18841037)
chr2 (167-231)||(19959881-19959945)
chr2 (206-238)||(22084798-22084830)
chr2 (167-231)||(30717459-30717523)
chr2 (165-249)||(37559014-37559098)
[»] chr6 (27 HSPs)
chr6 (167-249)||(33001229-33001311)
chr6 (167-238)||(18367895-18367966)
chr6 (170-251)||(32978842-32978923)
chr6 (166-251)||(34595169-34595254)
chr6 (168-251)||(9658914-9658998)
chr6 (167-251)||(13789189-13789273)
chr6 (167-251)||(13797808-13797892)
chr6 (167-238)||(16488519-16488590)
chr6 (167-251)||(17327590-17327679)
chr6 (215-251)||(7740676-7740712)
chr6 (169-232)||(12696383-12696446)
chr6 (168-251)||(17841530-17841613)
chr6 (167-238)||(24645529-24645600)
chr6 (210-249)||(30851637-30851676)
chr6 (166-251)||(8101120-8101205)
chr6 (167-251)||(6898221-6898305)
chr6 (167-251)||(13360313-13360396)
chr6 (167-251)||(28152133-28152217)
chr6 (167-238)||(16766756-16766827)
chr6 (217-251)||(19040387-19040421)
chr6 (167-232)||(9629448-9629513)
chr6 (168-233)||(31384983-31385048)
chr6 (167-247)||(4877982-4878061)
chr6 (167-251)||(7977770-7977854)
chr6 (170-251)||(7996325-7996402)
chr6 (170-251)||(8022399-8022476)
chr6 (172-232)||(24138485-24138545)
[»] chr5 (20 HSPs)
chr5 (171-250)||(30098982-30099061)
chr5 (168-238)||(6401557-6401627)
chr5 (167-249)||(42029789-42029871)
chr5 (167-251)||(21576685-21576769)
chr5 (167-238)||(21814320-21814391)
chr5 (167-239)||(16304366-16304438)
chr5 (170-238)||(19452998-19453066)
chr5 (167-238)||(21522809-21522880)
chr5 (167-238)||(21533375-21533446)
chr5 (169-251)||(30502330-30502412)
chr5 (169-251)||(30542673-30542755)
chr5 (207-249)||(32630715-32630757)
chr5 (206-251)||(26312804-26312849)
chr5 (167-251)||(28588614-28588698)
chr5 (167-235)||(40000493-40000561)
chr5 (167-251)||(43564916-43565000)
chr5 (206-249)||(23012387-23012430)
chr5 (167-238)||(39698600-39698671)
chr5 (169-251)||(21190998-21191080)
chr5 (170-242)||(39268541-39268613)
[»] chr1 (21 HSPs)
chr1 (168-251)||(10577676-10577759)
chr1 (167-238)||(25934675-25934746)
chr1 (167-239)||(32461393-32461465)
chr1 (167-251)||(37598866-37598950)
chr1 (167-239)||(41597410-41597482)
chr1 (167-251)||(46348323-46348407)
chr1 (168-245)||(12918986-12919063)
chr1 (167-251)||(5898206-5898290)
chr1 (167-251)||(22515827-22515911)
chr1 (167-251)||(51410060-51410144)
chr1 (167-238)||(9828103-9828174)
chr1 (166-251)||(52903284-52903366)
chr1 (206-247)||(29163360-29163401)
chr1 (166-251)||(34712322-34712407)
chr1 (167-251)||(18337364-18337448)
chr1 (2-38)||(21150163-21150199)
chr1 (168-231)||(6414932-6414995)
chr1 (167-238)||(47989556-47989627)
chr1 (205-251)||(30749875-30749921)
chr1 (205-251)||(30771326-30771372)
chr1 (214-251)||(39130754-39130791)
[»] chr7 (32 HSPs)
chr7 (162-251)||(15680844-15680933)
chr7 (167-251)||(18212973-18213057)
chr7 (113-165)||(22885002-22885054)
chr7 (46-134)||(22803682-22803770)
chr7 (46-134)||(22870180-22870268)
chr7 (167-232)||(2334314-2334379)
chr7 (170-251)||(39138479-39138560)
chr7 (168-232)||(4794954-4795018)
chr7 (168-248)||(18035806-18035885)
chr7 (2-38)||(22810159-22810195)
chr7 (46-102)||(22829409-22829465)
chr7 (168-251)||(20549826-20549909)
chr7 (168-249)||(3554447-3554528)
chr7 (167-232)||(5409771-5409836)
chr7 (167-232)||(9778559-9778624)
chr7 (172-232)||(13770750-13770810)
chr7 (167-251)||(21864843-21864927)
chr7 (6-38)||(22831546-22831578)
chr7 (46-102)||(22887676-22887732)
chr7 (168-251)||(10359634-10359717)
chr7 (167-249)||(598245-598327)
chr7 (168-237)||(11665370-11665439)
chr7 (166-251)||(21880187-21880272)
chr7 (166-251)||(25481937-25482022)
chr7 (167-232)||(43027404-43027469)
chr7 (6-38)||(22805824-22805856)
chr7 (2-38)||(22840573-22840609)
chr7 (2-38)||(22842685-22842721)
chr7 (46-102)||(22874305-22874361)
chr7 (2-38)||(22886010-22886046)
chr7 (166-238)||(24339701-24339773)
chr7 (175-251)||(41020531-41020607)
[»] chr4 (22 HSPs)
chr4 (167-238)||(5414101-5414172)
chr4 (167-247)||(19097835-19097914)
chr4 (167-251)||(35161071-35161155)
chr4 (168-238)||(30982808-30982878)
chr4 (166-251)||(2361914-2361999)
chr4 (167-247)||(23292926-23293006)
chr4 (168-238)||(12323968-12324038)
chr4 (167-237)||(24613630-24613700)
chr4 (166-251)||(34306743-34306828)
chr4 (166-251)||(49431061-49431146)
chr4 (166-238)||(36635378-36635450)
chr4 (167-238)||(46083920-46083991)
chr4 (212-251)||(54580008-54580047)
chr4 (217-251)||(10499260-10499294)
chr4 (209-251)||(36509074-36509116)
chr4 (206-251)||(8402721-8402766)
chr4 (206-251)||(38846991-38847036)
chr4 (167-243)||(4672025-4672101)
chr4 (167-251)||(16073429-16073513)
chr4 (167-243)||(23861369-23861445)
chr4 (167-251)||(28964188-28964272)
chr4 (167-251)||(35157925-35158009)
[»] scaffold0083 (1 HSPs)
scaffold0083 (166-251)||(45469-45554)
[»] scaffold0623 (1 HSPs)
scaffold0623 (168-232)||(5926-5990)
[»] scaffold0053 (1 HSPs)
scaffold0053 (166-251)||(8833-8918)
[»] scaffold0361 (1 HSPs)
scaffold0361 (164-232)||(14581-14649)
[»] scaffold0050 (1 HSPs)
scaffold0050 (206-251)||(70313-70358)
[»] scaffold0475 (1 HSPs)
scaffold0475 (167-251)||(3343-3427)
[»] scaffold0022 (1 HSPs)
scaffold0022 (167-251)||(90878-90962)
[»] scaffold0652 (1 HSPs)
scaffold0652 (168-251)||(403-486)
[»] scaffold0512 (1 HSPs)
scaffold0512 (167-249)||(4976-5058)
[»] scaffold0003 (1 HSPs)
scaffold0003 (166-232)||(241659-241725)
[»] scaffold0306 (1 HSPs)
scaffold0306 (169-238)||(13454-13523)
[»] scaffold0152 (1 HSPs)
scaffold0152 (169-238)||(21804-21873)


Alignment Details
Target: chr3 (Bit Score: 65; Significance: 1e-28; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 13845465 - 13845549
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    ||||||||||||||||||| ||||||||| ||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  13845465 ctatgaagcacggacactccttggataaggcgtgtctccgtgtcagacacgtctcgtgtccgacaccgacacatataattacact 13845549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 167 - 249
Target Start/End: Complemental strand, 35223057 - 35222975
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattaca 249  Q
    ||||||||||||||||||| | ||||||  |||||  |||||||||||||||||| |||||||||| ||||||||||||||||    
T  35223057 ctatgaagcacggacactcctcggataaagcgtgtccccgtgtcagacacgtgtcatgtccgacaccgacacatataattaca 35222975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 55401194 - 55401110
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    ||||||||||||||||||| | |||| || ||||| || ||||| ||||||||||||||||||||| ||||| | ||||||||||    
T  55401194 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacact 55401110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 2941637 - 2941593
Alignment:
Q  207 tgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    |||||||||||||||||||||||||| ||||||||||||||||||    
T  2941637 tgtcagacacgtgtcgtgtccgacaccgacacatataattacact 2941593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 251
Target Start/End: Complemental strand, 15864950 - 15864868
Alignment:
Q  168 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtc-gtgtccgacactgacacatataattacact 251  Q
    ||||||||||||||||||||||||| || |||| | |||||||||||||||||| ||||||||||| ||||| ||| ||||||||    
T  15864950 tatgaagcacggacactctttggattaggcgtg-tcccgtgtcagacacgtgtcggtgtccgacac-gacacctatgattacact 15864868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 40993275 - 40993359
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    |||||||||| |||||||| | |||| || |||||  | ||||| |||| |||||||||||||||| ||||||||||||||||||    
T  40993275 ctatgaagcatggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacatataattacact 40993359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 250
Target Start/End: Original strand, 8789489 - 8789573
Alignment:
Q  168 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgt--cgtgtccgacactgacacatataattacac 250  Q
    |||||||||||||||||| | |||| || ||||| || ||||| |||| ||||  |||||||||||| |||||||||||||||||    
T  8789489 tatgaagcacggacactcctcggattaggcgtgtctcggtgtccgacatgtgtgtcgtgtccgacaccgacacatataattacac 8789573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 20503585 - 20503500
Alignment:
Q  166 tctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    |||||||||||||||||||| | |||| || |||||  | |||||||||| ||||||||||| |||| ||||| | ||||||||||    
T  20503585 tctatgaagcacggacactcctcggattaggcgtgtcccggtgtcagacatgtgtcgtgtccaacaccgacacttgtaattacact 20503500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 25093622 - 25093537
Alignment:
Q  166 tctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    |||| |||||||| ||||||||  ||| ||| ||| ||| ||||| |||| |||| ||||||||||| ||||||||||||||||||    
T  25093622 tctaagaagcacgaacactcttcagattagaagtgcttcagtgtcggacatgtgttgtgtccgacaccgacacatataattacact 25093537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 206 - 251
Target Start/End: Complemental strand, 3631764 - 3631719
Alignment:
Q  206 gtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    ||||| |||| |||||||||||||||||| ||||||||||||||||    
T  3631764 gtgtcggacatgtgtcgtgtccgacactggcacatataattacact 3631719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 232
Target Start/End: Original strand, 15796223 - 15796288
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacac 232  Q
    |||||||||||| ||||||||||||| || |||||| | ||||  ||||||||| |||||||||||    
T  15796223 ctatgaagcacgaacactctttggattaggcgtgttccggtgttggacacgtgttgtgtccgacac 15796288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 26492145 - 26492229
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    ||||||||| |||||| || | |||| |||||||| |  |||||||||| |||||||||||||||| || || | ||||||||||    
T  26492145 ctatgaagcgcggacattcctcggattagacgtgtcttggtgtcagacatgtgtcgtgtccgacaccgatacttgtaattacact 26492229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 251
Target Start/End: Original strand, 49505148 - 49505178
Alignment:
Q  221 cgtgtccgacactgacacatataattacact 251  Q
    |||||||||||||||||||||||||||||||    
T  49505148 cgtgtccgacactgacacatataattacact 49505178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 232
Target Start/End: Complemental strand, 25065037 - 25064972
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacac 232  Q
    ||||| |||||| |||||| | ||||||  |||||  | |||||||||||||||||||||||||||    
T  25065037 ctatggagcacgaacactcctcggataaaccgtgtcccggtgtcagacacgtgtcgtgtccgacac 25064972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 251
Target Start/End: Complemental strand, 28918120 - 28918036
Alignment:
Q  169 atgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtc--cgacactgacacatataattacact 251  Q
    |||||||| |||||||| |||||| || |||||  | ||||| |||||||||||||||  |||||| ||||| | ||||||||||    
T  28918120 atgaagcagggacactccttggattaggcgtgtcccagtgtcggacacgtgtcgtgtccacgacaccgacacttgtaattacact 28918036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 250
Target Start/End: Complemental strand, 8842449 - 8842365
Alignment:
Q  166 tctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacac 250  Q
    |||||||||||||||||||| | |||| || ||||| ||  | ||  ||| |||||||||| ||||| |||| ||||||||||||    
T  8842449 tctatgaagcacggacactcctcggattaggcgtgtctcaatatctaacatgtgtcgtgtctgacaccgacatatataattacac 8842365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 3e-23; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 251
Target Start/End: Original strand, 43737752 - 43737835
Alignment:
Q  168 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    |||||||||||||||||| ||||||||| ||| |  ||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  43737752 tatgaagcacggacactccttggataaggcgtatccccgtgtcagacacctgtcgtgtccgacaccgacacatataattacact 43737835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 3951476 - 3951560
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    |||||||||||||| |||| |||||| || |||||| ||||||||||||||||||||||| ||||| ||||||||||| ||||||    
T  3951476 ctatgaagcacggaaactccttggattaggcgtgttcccgtgtcagacacgtgtcgtgtctgacaccgacacatataagtacact 3951560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 167 - 238
Target Start/End: Original strand, 34450961 - 34451032
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 238  Q
    ||||||||||||||||||| ||||||||| |||||  ||||||||||||||||||||||||||||| |||||    
T  34450961 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 34451032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 169 - 251
Target Start/End: Complemental strand, 3025668 - 3025586
Alignment:
Q  169 atgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    ||||||||||||||||| | |||| || |||||  | ||||||||||||||||||||||||||||||||| ||||||||||||    
T  3025668 atgaagcacggacactcctcggattagccgtgtcacagtgtcagacacgtgtcgtgtccgacactgacacctataattacact 3025586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 33405324 - 33405408
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    ||||| ||||||||||||| |||||| || |||||    |||||||||| |||||||||||||||| ||||||||||||||||||    
T  33405324 ctatggagcacggacactcattggattagccgtgtccaggtgtcagacatgtgtcgtgtccgacaccgacacatataattacact 33405408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 233
Target Start/End: Original strand, 26902103 - 26902170
Alignment:
Q  166 tctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacact 233  Q
    |||||||||||||||||||| |  |||||| |||||  ||||| ||||||||||||||||||||||||    
T  26902103 tctatgaagcacggacactcctcagataaggcgtgtccccgtgccagacacgtgtcgtgtccgacact 26902170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 212 - 249
Target Start/End: Original strand, 126332 - 126369
Alignment:
Q  212 gacacgtgtcgtgtccgacactgacacatataattaca 249  Q
    ||||||||||||||||||||||||||||||||||||||    
T  126332 gacacgtgtcgtgtccgacactgacacatataattaca 126369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 239
Target Start/End: Original strand, 4122182 - 4122250
Alignment:
Q  171 gaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacaca 239  Q
    |||||||||||||||||||||| ||||||||| | |||||  |||||||||||||  |||| |||||||    
T  4122182 gaagcacggacactctttggattagacgtgttccggtgtccaacacgtgtcgtgtttgacattgacaca 4122250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 4786278 - 4786362
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    ||||||||||||||||||||||| ||||| | ||| ||  | ||  |||| |||||| |||||||| ||||||||||||||||||    
T  4786278 ctatgaagcacggacactctttgaataagccatgtctcgttatcgaacacatgtcgtatccgacaccgacacatataattacact 4786362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 238
Target Start/End: Complemental strand, 22652106 - 22652035
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 238  Q
    ||||||||||||||||||| | |||| ||||||||  | ||||| ||||| ||||||||||||||| |||||    
T  22652106 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacatgtcgtgtccgacaccgacac 22652035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 169 - 251
Target Start/End: Original strand, 926730 - 926812
Alignment:
Q  169 atgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    ||||||||||||||||| | ||||||  | |||  | ||||| ||||||||||| ||||||||| ||||| ||||||||||||    
T  926730 atgaagcacggacactcctcggataaagcatgtcccggtgtcggacacgtgtcgcgtccgacaccgacacttataattacact 926812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 238
Target Start/End: Original strand, 6065586 - 6065657
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 238  Q
    ||||||||||||||||||| ||| || |  |||||| | ||||| |||| ||||||||||||||| ||||||    
T  6065586 ctatgaagcacggacactccttgaattatgcgtgttccggtgtcggacatgtgtcgtgtccgacattgacac 6065657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 238
Target Start/End: Complemental strand, 28745628 - 28745557
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 238  Q
    ||||||||||||||||||| ||| || |||| ||| || ||| | |||| |||||||||||||||| |||||    
T  28745628 ctatgaagcacggacactccttgaattagacttgtctcggtgacggacaggtgtcgtgtccgacaccgacac 28745557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 225
Target Start/End: Complemental strand, 18964309 - 18964251
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgt 225  Q
    ||||||||||| ||||||| | ||||||| ||||| ||||||| ||||| |||||||||    
T  18964309 ctatgaagcacagacactcctcggataaggcgtgtctccgtgttagacaggtgtcgtgt 18964251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 232
Target Start/End: Complemental strand, 8343446 - 8343381
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacac 232  Q
    ||||||||||| ||||||||| |||| || |||||  | ||||| ||||||||||||||| |||||    
T  8343446 ctatgaagcacagacactcttcggattaggcgtgtcccggtgtcggacacgtgtcgtgtcggacac 8343381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 248
Target Start/End: Original strand, 24413499 - 24413580
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattac 248  Q
    ||||||||||||||||||  | |||| ||||||||  |  |||  ||||||  ||||||||||||||||||| |||||||||    
T  24413499 ctatgaagcacggacacttctcggattagacgtgtcccgctgttggacacgcatcgtgtccgacactgacacttataattac 24413580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 237
Target Start/End: Original strand, 29447040 - 29447109
Alignment:
Q  168 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgaca 237  Q
    |||||||||||||||||| | |||| || |||||    ||||||||||| ||||||||||||||| ||||    
T  29447040 tatgaagcacggacactcctaggattaggcgtgtcctggtgtcagacacatgtcgtgtccgacaccgaca 29447109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 3e-23; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 166 - 241
Target Start/End: Complemental strand, 24009415 - 24009340
Alignment:
Q  166 tctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacata 241  Q
    |||||||||||||||||||| ||||||||| |||||  ||||||||||||||||||||||||||||| ||||||||    
T  24009415 tctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacata 24009340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 20242667 - 20242751
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    ||||||||||| ||||||||| ||||||| |||||   |||||||||||||||| ||||||||||| ||||||||||||||||||    
T  20242667 ctatgaagcacagacactcttcggataaggcgtgtcctcgtgtcagacacgtgttgtgtccgacaccgacacatataattacact 20242751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 231
Target Start/End: Original strand, 36096304 - 36096368
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgaca 231  Q
    |||||||||||||||||||||||| |||| |||||  ||||||||||||||||||||||||||||    
T  36096304 ctatgaagcacggacactctttggttaaggcgtgtccccgtgtcagacacgtgtcgtgtccgaca 36096368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 18054716 - 18054772
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgt 223  Q
    |||||||||||||||| || ||||||||| |||||||||||||||||||||||||||    
T  18054716 ctatgaagcacggacattccttggataaggcgtgtttccgtgtcagacacgtgtcgt 18054772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 167 - 238
Target Start/End: Complemental strand, 35056998 - 35056927
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 238  Q
    ||||||||||||||||||| |  ||| || |||||||||||||| ||||||||||||||||||||| |||||    
T  35056998 ctatgaagcacggacactcctcagattaggcgtgtttccgtgtcggacacgtgtcgtgtccgacaccgacac 35056927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 249
Target Start/End: Original strand, 34993922 - 34994004
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattaca 249  Q
    |||||||||||| |||||| ||| || || |||||  | ||||| ||||| |||||||| |||||||||||||||||||||||    
T  34993922 ctatgaagcacgaacactccttgaattaggcgtgtcccagtgtcggacacatgtcgtgttcgacactgacacatataattaca 34994004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 251
Target Start/End: Complemental strand, 28596587 - 28596504
Alignment:
Q  168 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    |||||||||||||||||| | |||| ||  ||||    ||||| ||||||||||||||||||||| ||||| ||||||||||||    
T  28596587 tatgaagcacggacactcctcggattaggagtgtccgagtgtcggacacgtgtcgtgtccgacaccgacacttataattacact 28596504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 169 - 251
Target Start/End: Original strand, 2438661 - 2438743
Alignment:
Q  169 atgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    ||||||||||||||||| | |||| || |||||  | ||||| |||| |||||||||||||||| ||||| | ||||||||||    
T  2438661 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacact 2438743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 15972992 - 15972908
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    |||||||||||||||| |||| |||| ||  ||||  | | ||| ||||||||||||||||||||| ||||| | ||||||||||    
T  15972992 ctatgaagcacggacattcttcggattaggtgtgtcccggcgtcggacacgtgtcgtgtccgacaccgacacttgtaattacact 15972908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 238
Target Start/End: Original strand, 34784910 - 34784982
Alignment:
Q  166 tctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 238  Q
    |||||||||||| ||||||| | | ||||| |||||  |||||||||||| ||||||||||||| || |||||    
T  34784910 tctatgaagcacagacactcctcgaataaggcgtgtccccgtgtcagacaggtgtcgtgtccgataccgacac 34784982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 235
Target Start/End: Original strand, 42511322 - 42511390
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactga 235  Q
    ||||||||||||||||||| | |||| || |||||  | ||||| ||||||||| ||||||||||||||    
T  42511322 ctatgaagcacggacactcctcggattagccgtgtccctgtgtcggacacgtgttgtgtccgacactga 42511390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 238
Target Start/End: Complemental strand, 4207986 - 4207915
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 238  Q
    ||||||| || | |||||||| |||| | ||||||||| |||||  |||||||||||||||||||| |||||    
T  4207986 ctatgaaacatgaacactcttcggattaaacgtgtttcggtgtcgaacacgtgtcgtgtccgacaccgacac 4207915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 229
Target Start/End: Complemental strand, 26769642 - 26769579
Alignment:
Q  166 tctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccga 229  Q
    |||||||||||||||||||| | |||| || |||||  | ||||| ||||||||||||||||||    
T  26769642 tctatgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccga 26769579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 251
Target Start/End: Complemental strand, 5367261 - 5367227
Alignment:
Q  217 gtgtcgtgtccgacactgacacatataattacact 251  Q
    |||||||||||||||| ||||||||||||||||||    
T  5367261 gtgtcgtgtccgacaccgacacatataattacact 5367227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 245
Target Start/End: Original strand, 19580225 - 19580303
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataat 245  Q
    ||||||||||| ||||||||| |||| ||| ||||||  ||||  ||||||||| ||||||||||| || || ||||||    
T  19580225 ctatgaagcacagacactcttcggattagatgtgttttggtgttggacacgtgttgtgtccgacaccgatacttataat 19580303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 232
Target Start/End: Complemental strand, 41843565 - 41843500
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacac 232  Q
    ||||||||||| ||||||| | ||||||  |||||  ||||||| ||||||||||| |||||||||    
T  41843565 ctatgaagcacagacactcctcggataaagcgtgtccccgtgtcggacacgtgtcgcgtccgacac 41843500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 232
Target Start/End: Original strand, 11223790 - 11223857
Alignment:
Q  164 attctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacac 232  Q
    |||||||||||||||||||||| |  ||| || |||||  | |||||||||| ||||||||||||||||    
T  11223790 attctatgaagcacggacactcctcagattaggcgtgtcccggtgtcagaca-gtgtcgtgtccgacac 11223857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 18840953 - 18841037
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    ||||||||||||||||||| | |||| ||  ||||  | ||||| |||| |||||||||| ||||| ||||| | ||||||||||    
T  18840953 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacacttgtaattacact 18841037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 19959945 - 19959881
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgaca 231  Q
    ||||||||||| || ||||||||||| ||||| || || ||||| ||||| ||||||||| ||||    
T  19959945 ctatgaagcaccgatactctttggattagacgcgtctcggtgtcggacacttgtcgtgtctgaca 19959881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 238
Target Start/End: Original strand, 22084798 - 22084830
Alignment:
Q  206 gtgtcagacacgtgtcgtgtccgacactgacac 238  Q
    ||||||||||||||| |||||||||||||||||    
T  22084798 gtgtcagacacgtgttgtgtccgacactgacac 22084830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 231
Target Start/End: Original strand, 30717459 - 30717523
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgaca 231  Q
    ||||||||||||||||||| |||||| || ||| |  | |||||  |||||||||||||||||||    
T  30717459 ctatgaagcacggacactccttggattaggcgtatcccagtgtcgaacacgtgtcgtgtccgaca 30717523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 249
Target Start/End: Complemental strand, 37559098 - 37559014
Alignment:
Q  165 ttctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattaca 249  Q
    ||||||||||||||||||||| | |||| |  |||||  | ||||| ||||||||||  ||||||||| ||||| | ||||||||    
T  37559098 ttctatgaagcacggacactcctcggattaagcgtgtaccggtgtcggacacgtgtcaagtccgacaccgacacttgtaattaca 37559014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 167 - 249
Target Start/End: Original strand, 33001229 - 33001311
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattaca 249  Q
    |||||||||||  ||||||||||||| || ||| |||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  33001229 ctatgaagcacaaacactctttggattaggcgtatttcggtgtcagacacgtgtcgtgtccgacaccgacacatataattaca 33001311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 167 - 238
Target Start/End: Complemental strand, 18367966 - 18367895
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 238  Q
    ||||||||||||||||||| ||||||||| |||||  |||||||||||| |||||||||| ||||| |||||    
T  18367966 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacatgtgtcgtgtctgacaccgacac 18367895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 251
Target Start/End: Original strand, 32978842 - 32978923
Alignment:
Q  170 tgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    |||||||||||||||| |||||| ||||||||  | ||||| |||| |||||||||||||||| ||||| | ||||||||||    
T  32978842 tgaagcacggacactccttggattagacgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacact 32978923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 34595254 - 34595169
Alignment:
Q  166 tctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    |||||||||||||||||||| | |||| ||  ||||  | ||||||||||||||||||||||||||| ||||| | ||||||||||    
T  34595254 tctatgaagcacggacactcctcggattaggtgtgtcccggtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacact 34595169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 251
Target Start/End: Complemental strand, 9658998 - 9658914
Alignment:
Q  168 tatgaagcacggacactctttgga-taagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    |||||||||||||||||| ||||| | || |||||| | |||||||||||||||||||||  |||| |||| |||||||||||||    
T  9658998 tatgaagcacggacactccttggaattaggcgtgttccggtgtcagacacgtgtcgtgtctaacaccgacaaatataattacact 9658914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 13789273 - 13789189
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    |||||||||||| |||||| ||| ||||| ||| |  || ||||||||||||||| ||||||||| ||| |||||||||||||||    
T  13789273 ctatgaagcacgaacactccttgaataaggcgtatccccatgtcagacacgtgtcatgtccgacattgatacatataattacact 13789189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 13797892 - 13797808
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    |||||||||||| |||||| ||| ||||| ||| |  || ||||||||||||||| ||||||||| ||| |||||||||||||||    
T  13797892 ctatgaagcacgaacactccttgaataaggcgtatccccatgtcagacacgtgtcatgtccgacattgatacatataattacact 13797808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 167 - 238
Target Start/End: Original strand, 16488519 - 16488590
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 238  Q
    |||||||||||| ||| || ||||||||| |||||  ||||| ||||||||||||||||||||||| |||||    
T  16488519 ctatgaagcacgaacattccttggataaggcgtgtccccgtgccagacacgtgtcgtgtccgacaccgacac 16488590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 17327590 - 17327679
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgac-----actgacacatataattacact 251  Q
    ||||||||||||||||||| | |||| || |||||  | |||||||||||||||||||||||||     ||||||||||||| |||||||    
T  17327590 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcagacacgtgtcgtgtccgacacgacactgacacatatagttacact 17327679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 215 - 251
Target Start/End: Complemental strand, 7740712 - 7740676
Alignment:
Q  215 acgtgtcgtgtccgacactgacacatataattacact 251  Q
    |||||||||||||||||||||||||||||||||||||    
T  7740712 acgtgtcgtgtccgacactgacacatataattacact 7740676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 232
Target Start/End: Complemental strand, 12696446 - 12696383
Alignment:
Q  169 atgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacac 232  Q
    ||||||||| ||||||| |||||||||  ||||  | |||||||||||||||||||||||||||    
T  12696446 atgaagcacagacactccttggataaggtgtgtcccggtgtcagacacgtgtcgtgtccgacac 12696383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 251
Target Start/End: Original strand, 17841530 - 17841613
Alignment:
Q  168 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    |||||||||||||||||| | |||| || ||||| || ||||| ||||| ||||||||||||||| | ||| | ||||||||||    
T  17841530 tatgaagcacggacactcctcggattaggcgtgtctcagtgtcggacacatgtcgtgtccgacaccgtcacttgtaattacact 17841613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 238
Target Start/End: Complemental strand, 24645600 - 24645529
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 238  Q
    ||||||||||| ||||||||| |||| |||||||| |  ||||| ||||||||||||||| ||||| |||||    
T  24645600 ctatgaagcacagacactcttcggattagacgtgtcttggtgtcggacacgtgtcgtgtctgacaccgacac 24645529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 210 - 249
Target Start/End: Complemental strand, 30851676 - 30851637
Alignment:
Q  210 cagacacgtgtcgtgtccgacactgacacatataattaca 249  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  30851676 cagacacgtgtcgtgtccgacaccgacacatataattaca 30851637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 8101205 - 8101120
Alignment:
Q  166 tctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    |||||||| ||  |||| ||||||||  |||||||||||| |||| |||| |||| || |  ||||||||||||||||||||||||    
T  8101205 tctatgaaccatagacattctttggactagacgtgtttccatgtcggacatgtgttgtatttgacactgacacatataattacact 8101120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 6898221 - 6898305
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    |||||||||||| |||||| | |||| || |||||||| ||||  ||||||  ||||||||||||| ||||| | ||||||||||    
T  6898221 ctatgaagcacgaacactcatcggattaggcgtgtttcggtgttggacacgcttcgtgtccgacaccgacacttgtaattacact 6898305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 13360313 - 13360396
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    ||||||||||||||||||||| |||| || ||||| || ||||| ||||  ||| ||||| ||||| || |||||||||||||||    
T  13360313 ctatgaagcacggacactcttcggattaggcgtgtctcagtgtcggaca-ttgttgtgtctgacaccgaaacatataattacact 13360396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 28152217 - 28152133
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    |||||||||||| |||||| | |||| || | |||  | ||||| ||||||||||||||||||||| ||||| | ||||||||||    
T  28152217 ctatgaagcacgaacactcctcggattaggcctgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacact 28152133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 238
Target Start/End: Complemental strand, 16766827 - 16766756
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 238  Q
    |||||||||||||||| |||| |||| || |||||  | ||||| ||||||||| ||||||||||| |||||    
T  16766827 ctatgaagcacggacattcttcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacac 16766756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 251
Target Start/End: Complemental strand, 19040421 - 19040387
Alignment:
Q  217 gtgtcgtgtccgacactgacacatataattacact 251  Q
    |||||||||||||||| ||||||||||||||||||    
T  19040421 gtgtcgtgtccgacacagacacatataattacact 19040387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 232
Target Start/End: Complemental strand, 9629513 - 9629448
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacac 232  Q
    |||||||||| |||||||| | |||| |||||||| || ||||| ||||| ||| |||||||||||    
T  9629513 ctatgaagcatggacactcctcggattagacgtgtctcagtgtcggacacatgttgtgtccgacac 9629448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 233
Target Start/End: Complemental strand, 31385048 - 31384983
Alignment:
Q  168 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacact 233  Q
    |||||||||||||||||| |||||| || |||||  | ||||  |||||||||||||||| |||||    
T  31385048 tatgaagcacggacactccttggattaggcgtgtcccggtgtaggacacgtgtcgtgtccaacact 31384983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 247
Target Start/End: Complemental strand, 4878061 - 4877982
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataatta 247  Q
    ||||||||||||||||||| | |||| || |||||  | ||||| |||| |||||||||||||||| ||||| | ||||||    
T  4878061 ctatgaagcacggacactcctcggattaggcgtgtc-ctgtgtcggacatgtgtcgtgtccgacaccgacacttgtaatta 4877982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 7977770 - 7977854
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    |||||||||||| |||||| || ||| || ||||||||  |||| ||||  ||| ||||||||||| ||||| | ||||||||||    
T  7977770 ctatgaagcacgaacactccttagattaggcgtgtttcgttgtcggacatatgttgtgtccgacaccgacacttgtaattacact 7977854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 251
Target Start/End: Original strand, 7996325 - 7996402
Alignment:
Q  170 tgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    ||||||||||| |||| |||||| || |||||  |||||| ||||||||||||    |||||| ||| ||||||||||||||    
T  7996325 tgaagcacggagactccttggattaggcgtgtccccgtgttagacacgtgtcg----cgacaccgacgcatataattacact 7996402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 251
Target Start/End: Complemental strand, 8022476 - 8022399
Alignment:
Q  170 tgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    ||||||||||| |||| |||||| || |||||  |||||| ||||||||||||    |||||| ||| ||||||||||||||    
T  8022476 tgaagcacggagactccttggattaggcgtgtccccgtgttagacacgtgtcg----cgacaccgacgcatataattacact 8022399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 24138545 - 24138485
Alignment:
Q  172 aagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacac 232  Q
    |||||||||||||||| |||| || | ||| || |||||||||||||||| ||||| ||||    
T  24138545 aagcacggacactcttcggattaggcatgtctctgtgtcagacacgtgtcatgtccaacac 24138485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 6e-21; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 171 - 250
Target Start/End: Original strand, 30098982 - 30099061
Alignment:
Q  171 gaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacac 250  Q
    |||||||| |||||| ||||||||| |||||  |||||||||||||||||||| |||||||| |||||||||||||||||    
T  30098982 gaagcacgaacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtatccgacaccgacacatataattacac 30099061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 168 - 238
Target Start/End: Complemental strand, 6401627 - 6401557
Alignment:
Q  168 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 238  Q
    |||||||||||||||||| ||||||||| ||| |  |||||||||||||||||||||||||||||||||||    
T  6401627 tatgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacactgacac 6401557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 249
Target Start/End: Complemental strand, 42029871 - 42029789
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattaca 249  Q
    |||||| |||||||||||| | ||||||| ||||| | |||| |||||| |||||||||||||||| || |||||||||||||    
T  42029871 ctatgatgcacggacactcctcggataaggcgtgtctacgtgacagacatgtgtcgtgtccgacaccgatacatataattaca 42029789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 21576685 - 21576769
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    ||||||||||||||||||| | |||| || |||||  | ||||||||||||||||||||||||||  ||||| | ||||||||||    
T  21576685 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacatcgacacttgtaattacact 21576769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 167 - 238
Target Start/End: Complemental strand, 21814391 - 21814320
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 238  Q
    |||||||||||| ||| || ||||||||| |||||  ||||| ||||||||||||||||||||||| |||||    
T  21814391 ctatgaagcacgaacattccttggataaggcgtgtccccgtgccagacacgtgtcgtgtccgacaccgacac 21814320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 239
Target Start/End: Original strand, 16304366 - 16304438
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacaca 239  Q
    |||||||||||||||| || | |||| |||||||| || ||||| | |||||||||||||||| |||||||||    
T  16304366 ctatgaagcacggacattcctcggattagacgtgtctcggtgtcgggcacgtgtcgtgtccgatactgacaca 16304438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 19452998 - 19453066
Alignment:
Q  170 tgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 238  Q
    |||||||||||| ||| ||||||||| ||| | ||||||| ||||| ||||||||||||||| ||||||    
T  19452998 tgaagcacggacgctccttggataaggcgtatctccgtgtgagacatgtgtcgtgtccgacattgacac 19453066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 238
Target Start/End: Complemental strand, 21522880 - 21522809
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 238  Q
    |||||| ||||||||||||||||||| || |||||  | ||| | ||||||||||||||||||||| |||||    
T  21522880 ctatgatgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacac 21522809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 238
Target Start/End: Complemental strand, 21533446 - 21533375
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 238  Q
    |||||| ||||||||||||||||||| || |||||  | ||| | ||||||||||||||||||||| |||||    
T  21533446 ctatgatgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacac 21533375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 169 - 251
Target Start/End: Original strand, 30502330 - 30502412
Alignment:
Q  169 atgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    |||||||||| ||| || |||||| || | |||  | ||||| |||| |||||||||||||||| ||||||||||||||||||    
T  30502330 atgaagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacacatataattacact 30502412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 169 - 251
Target Start/End: Original strand, 30542673 - 30542755
Alignment:
Q  169 atgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    |||||||||| ||| || |||||| || | |||  | ||||| |||| |||||||||||||||| ||||||||||||||||||    
T  30542673 atgaagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacacatataattacact 30542755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 207 - 249
Target Start/End: Original strand, 32630715 - 32630757
Alignment:
Q  207 tgtcagacacgtgtcgtgtccgacactgacacatataattaca 249  Q
    |||| |||||||||||| |||||||||||||||||||||||||    
T  32630715 tgtcggacacgtgtcgtatccgacactgacacatataattaca 32630757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 206 - 251
Target Start/End: Complemental strand, 26312849 - 26312804
Alignment:
Q  206 gtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    ||||||||||||| ||||||||||||| || |||||||||||||||    
T  26312849 gtgtcagacacgtatcgtgtccgacaccgatacatataattacact 26312804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 28588614 - 28588698
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    |||||||||| |||||||||| |||| |  |||||    |||||||| | |||||||||||||||| ||||| ||||||||||||    
T  28588614 ctatgaagcatggacactcttcggattaagcgtgtcctggtgtcagatatgtgtcgtgtccgacaccgacacctataattacact 28588698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 235
Target Start/End: Original strand, 40000493 - 40000561
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactga 235  Q
    ||||||||||||||||||| |  |||||||||||| || ||||||| ||| ||||| || |||||||||    
T  40000493 ctatgaagcacggacactcctcagataagacgtgtctcggtgtcaggcacatgtcgcgtacgacactga 40000561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 43565000 - 43564916
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    ||||||||||||||||||  | |||| || |||||  | | ||| ||||| ||||||||||||||| ||||| ||||||||||||    
T  43565000 ctatgaagcacggacacttctcggattaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacacttataattacact 43564916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 206 - 249
Target Start/End: Original strand, 23012387 - 23012430
Alignment:
Q  206 gtgtcagacacgtgtcgtgtccgacactgacacatataattaca 249  Q
    |||||||||| ||||||||||| |||| ||||||||||||||||    
T  23012387 gtgtcagacatgtgtcgtgtccaacaccgacacatataattaca 23012430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 238
Target Start/End: Complemental strand, 39698671 - 39698600
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 238  Q
    ||||||||||||||||||| | |||| || ||||| || ||||| || || ||||||||||||||| |||||    
T  39698671 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatacatgtcgtgtccgacaccgacac 39698600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 251
Target Start/End: Original strand, 21190998 - 21191080
Alignment:
Q  169 atgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    ||||||||||||||||| | |||| || |||||  | | ||| ||||||||| ||||||||||| ||||| | ||||||||||    
T  21190998 atgaagcacggacactcctcggattaggcgtgtcccggagtcggacacgtgttgtgtccgacaccgacacttgtaattacact 21191080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 242
Target Start/End: Original strand, 39268541 - 39268613
Alignment:
Q  170 tgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatat 242  Q
    |||||||||||||||| | |||| || |||||  | ||||| ||||| |||||||||| |||| |||||||||    
T  39268541 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacatgtcgtgtccaacaccgacacatat 39268613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 6e-21; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 168 - 251
Target Start/End: Original strand, 10577676 - 10577759
Alignment:
Q  168 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    |||||||||||||||||| ||||||||| |||||  |||||||||||||| |||||||||| | | ||||||||||||||||||    
T  10577676 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgcgtcgtgtccgcccccgacacatataattacact 10577759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 238
Target Start/End: Complemental strand, 25934746 - 25934675
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 238  Q
    ||||||||||||||||||| ||||||||| ||| |  ||||||||||||||||||||||||||||| |||||    
T  25934746 ctatgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacaccgacac 25934675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 239
Target Start/End: Original strand, 32461393 - 32461465
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacaca 239  Q
    ||||||||||||||||||  |||||| || |||||  | ||||||||||||||||||||||||||| ||||||    
T  32461393 ctatgaagcacggacacttcttggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacaccgacaca 32461465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 37598950 - 37598866
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    ||||||||||||||||||| | |||| || |||||  |  |||| ||||||||||||||||||||| ||||| ||||||||||||    
T  37598950 ctatgaagcacggacactcctcggattaggcgtgtcccattgtcggacacgtgtcgtgtccgacaccgacacttataattacact 37598866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 239
Target Start/End: Original strand, 41597410 - 41597482
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacaca 239  Q
    ||||||||||| ||||||| ||||||||  ||| |  ||||||||||||||||||||||||||||| ||||||    
T  41597410 ctatgaagcacagacactccttggataaagcgtatccccgtgtcagacacgtgtcgtgtccgacacggacaca 41597482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 46348323 - 46348407
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    ||||||||||||||||| | | |||| || ||||| || ||||| ||||||||||||||||||||| ||||| | ||||||||||    
T  46348323 ctatgaagcacggacacacctcggatcaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacact 46348407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 245
Target Start/End: Complemental strand, 12919063 - 12918986
Alignment:
Q  168 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataat 245  Q
    ||||||||||| |||||  | ||||||| |||||  |||||||||||||||||||||||||| ||  |||||||||||    
T  12919063 tatgaagcacgaacacttctcggataagccgtgtccccgtgtcagacacgtgtcgtgtccgataccaacacatataat 12918986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 5898206 - 5898290
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    |||| |||||||||||||| | |||| ||||||||  | ||||  ||||||||||||||| ||||| ||| ||||||||||||||    
T  5898206 ctataaagcacggacactcctcggattagacgtgtcccggtgttggacacgtgtcgtgtctgacaccgacgcatataattacact 5898290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 22515827 - 22515911
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    ||||||||||||||||||| | |||| || ||||| || ||||| || | |||||||||||||||| ||||| | ||||||||||    
T  22515827 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatatgtgtcgtgtccgacaccgacacttgtaattacact 22515911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 51410144 - 51410060
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    |||||||||||| | |||| |||||| || ||||| || ||||| || |||||||||||||||||| ||||| | ||||||||||    
T  51410144 ctatgaagcacgaatactccttggattaggcgtgtctcggtgtcggatacgtgtcgtgtccgacaccgacacttgtaattacact 51410060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 238
Target Start/End: Complemental strand, 9828174 - 9828103
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 238  Q
    ||||||||||||||||||| | |||| ||||||||  | ||||| ||||||||||||||| ||||| |||||    
T  9828174 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacgtgtcgtgtctgacacggacac 9828103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 52903366 - 52903284
Alignment:
Q  166 tctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    |||||||||||||||||||||| | ||||| |||||  | ||||| |||||    |||||||||||| ||||||||||||||||||    
T  52903366 tctatgaagcacggacactcttcgaataagccgtgtcccggtgtcggacaca---cgtgtccgacaccgacacatataattacact 52903284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 206 - 247
Target Start/End: Original strand, 29163360 - 29163401
Alignment:
Q  206 gtgtcagacacgtgtcgtgtccgacactgacacatataatta 247  Q
    ||||||| ||||||||||||||||||| ||||||||||||||    
T  29163360 gtgtcaggcacgtgtcgtgtccgacaccgacacatataatta 29163401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 34712322 - 34712407
Alignment:
Q  166 tctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    |||||||||||||||||||| ||| || ||||||||  | ||||  ||||||||||     |||||||||||||||||||||||||    
T  34712322 tctatgaagcacggacactccttgaattagacgtgtcccagtgtaggacacgtgtccgacacgacactgacacatataattacact 34712407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 18337448 - 18337364
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    ||||||||||||||||||| | |||| || | |||  | ||||| ||||||||| ||||||||||| ||||| | ||||||||||    
T  18337448 ctatgaagcacggacactcctcggatcaggcatgtcccagtgtcggacacgtgttgtgtccgacaccgacacttgtaattacact 18337364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 21150163 - 21150199
Alignment:
Q  2 acagaagcattattcattcacaaactataatcatgtt 38  Q
    ||||||||||| |||||||||||||||||||||||||    
T  21150163 acagaagcattgttcattcacaaactataatcatgtt 21150199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 231
Target Start/End: Original strand, 6414932 - 6414995
Alignment:
Q  168 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgaca 231  Q
    |||||||||||||||||| | |||| | | ||||  | ||||||||||||||||||||||||||    
T  6414932 tatgaagcacggacactcctcggatgaaatgtgtcgcggtgtcagacacgtgtcgtgtccgaca 6414995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 238
Target Start/End: Complemental strand, 47989627 - 47989556
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 238  Q
    ||||||||||||||||||| | |||| || |||||  |  ||||||||| |||||||||||||||| |||||    
T  47989627 ctatgaagcacggacactcctcggattaggcgtgtcccgatgtcagacatgtgtcgtgtccgacaccgacac 47989556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 251
Target Start/End: Complemental strand, 30749921 - 30749875
Alignment:
Q  205 cgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    ||||||| |||| ||| ||||||||||| ||||||||||||||||||    
T  30749921 cgtgtcaaacacatgtggtgtccgacaccgacacatataattacact 30749875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 251
Target Start/End: Complemental strand, 30771372 - 30771326
Alignment:
Q  205 cgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    ||||||| |||| ||| ||||||||||| ||||||||||||||||||    
T  30771372 cgtgtcaaacacatgtggtgtccgacaccgacacatataattacact 30771326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 39130754 - 39130791
Alignment:
Q  214 cacgtgtcgtgtccgacactgacacatataattacact 251  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  39130754 cacgtgttgtgtccgacaccgacacatataattacact 39130791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 251
Target Start/End: Complemental strand, 15680933 - 15680844
Alignment:
Q  162 agattctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    |||| ||||||||||||||||||| | | || |||||||| || ||||| ||||||||||||||||||||| ||||| ||||||||||||    
T  15680933 agatcctatgaagcacggacactcctcgaattagacgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttataattacact 15680844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 18212973 - 18213057
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    ||||||||||| ||||||| | ||||||| |||||  |||||||||| | | |||||||||||||| ||||||||||||||||||    
T  18212973 ctatgaagcacagacactcctcggataaggcgtgtccccgtgtcagaaaggggtcgtgtccgacaccgacacatataattacact 18213057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 113 - 165
Target Start/End: Complemental strand, 22885054 - 22885002
Alignment:
Q  113 gttctgattttgcatatactttgttttgtccaagttttatctattgagtagat 165  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  22885054 gttctgattttgcatatactttactttgtccaagttttatctattgagtagat 22885002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 22803770 - 22803682
Alignment:
Q  46 aagtgaaatcatgtttgagtaaataattaaatagatacatgaaagcattttctcattnnnnnnntttgttctgattttgcatatacttt 134  Q
    ||||||||||||| ||||||| |||||| ||||||||||||||||| |||| |||||       ||| |||||||||||||||||||||    
T  22803770 aagtgaaatcatgattgagtagataatttaatagatacatgaaagctttttttcattaaactcttttcttctgattttgcatatacttt 22803682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 22870268 - 22870180
Alignment:
Q  46 aagtgaaatcatgtttgagtaaataattaaatagatacatgaaagcattttctcattnnnnnnntttgttctgattttgcatatacttt 134  Q
    ||||||||||||| ||||||| |||||| ||||||||||||||||  |||| |||||       ||| |||||||||||||||||||||    
T  22870268 aagtgaaatcatgattgagtagataatttaatagatacatgaaagttttttttcattaaactcttttcttctgattttgcatatacttt 22870180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 232
Target Start/End: Complemental strand, 2334379 - 2334314
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacac 232  Q
    ||||||| ||||||||||| | |||| ||||||||||| ||||| |||| ||||||||||||||||    
T  2334379 ctatgaaacacggacactcctcggattagacgtgtttcagtgtcggacatgtgtcgtgtccgacac 2334314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 251
Target Start/End: Complemental strand, 39138560 - 39138479
Alignment:
Q  170 tgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    |||||||| || |||||| ||||||| |||||  |||||| ||||| || ||||||||||||| |||| |||||||||||||    
T  39138560 tgaagcacagatactcttgggataaggcgtgtccccgtgttagacatgtatcgtgtccgacaccgacatatataattacact 39138479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 232
Target Start/End: Complemental strand, 4795018 - 4794954
Alignment:
Q  168 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacac 232  Q
    |||||||||| ||||||  |||||| ||||||||||  |||||||| ||||||||||||||||||    
T  4795018 tatgaagcacagacacttcttggattagacgtgtttaggtgtcagatacgtgtcgtgtccgacac 4794954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 248
Target Start/End: Original strand, 18035806 - 18035885
Alignment:
Q  168 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattac 248  Q
    |||||||||||||||||| | |||| ||||||| |||||||||||||| ||||| | ||  |||||||||||| |||||||    
T  18035806 tatgaagcacggacactcctcggattagacgtg-ttccgtgtcagacatgtgtcctatctcacactgacacatgtaattac 18035885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 22810195 - 22810159
Alignment:
Q  2 acagaagcattattcattcacaaactataatcatgtt 38  Q
    |||||||||||||||||||||||||||||||||||||    
T  22810195 acagaagcattattcattcacaaactataatcatgtt 22810159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 22829465 - 22829409
Alignment:
Q  46 aagtgaaatcatgtttgagtaaataattaaatagatacatgaaagcattttctcatt 102  Q
    ||||||| ||||| ||||||||||| || ||||| ||||||||||||||||||||||    
T  22829465 aagtgaattcatgcttgagtaaatagtttaatagttacatgaaagcattttctcatt 22829409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 251
Target Start/End: Complemental strand, 20549909 - 20549826
Alignment:
Q  168 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    |||||||||||| ||||| | |||| || ||||| ||  |||| |||| |||| ||||||||||| ||||||||||||||||||    
T  20549909 tatgaagcacgggcactcctcggattaggcgtgtctcattgtcggacatgtgttgtgtccgacaccgacacatataattacact 20549826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 249
Target Start/End: Original strand, 3554447 - 3554528
Alignment:
Q  168 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattaca 249  Q
    |||||||||| ||||||||| | || |||||||| || |||| ||| | |||||||||||||||| ||||  ||||||||||    
T  3554447 tatgaagcacagacactcttcgaattagacgtgtctcagtgttagatatgtgtcgtgtccgacaccgacatctataattaca 3554528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 232
Target Start/End: Original strand, 5409771 - 5409836
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacac 232  Q
    ||||||||||||||||||| | |||| || |||||  | ||||| |||||||||||||||||||||    
T  5409771 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacac 5409836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 232
Target Start/End: Complemental strand, 9778624 - 9778559
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacac 232  Q
    ||||||||||||||||||| |||||| || |||||  | ||||| ||||||||| |||||||||||    
T  9778624 ctatgaagcacggacactccttggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacac 9778559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 13770810 - 13770750
Alignment:
Q  172 aagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacac 232  Q
    |||||||||||||||| |||| || |||||| | ||||| ||||||||| |||||||||||    
T  13770810 aagcacggacactcttcggattaggcgtgttccggtgtcggacacgtgttgtgtccgacac 13770750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 21864927 - 21864843
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    ||||||||||| ||||||| | | || ||||||||  | ||||| ||||||||||||||||||||  ||||| | ||||||||||    
T  21864927 ctatgaagcacagacactcctcgaattagacgtgtcccggtgtcggacacgtgtcgtgtccgacagcgacacttgtaattacact 21864843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 22831578 - 22831546
Alignment:
Q  6 aagcattattcattcacaaactataatcatgtt 38  Q
    |||||||||||||||||||||||||||||||||    
T  22831578 aagcattattcattcacaaactataatcatgtt 22831546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 22887732 - 22887676
Alignment:
Q  46 aagtgaaatcatgtttgagtaaataattaaatagatacatgaaagcattttctcatt 102  Q
    ||||||||||||||||||||||||  || ||||| ||||| ||| ||||||||||||    
T  22887732 aagtgaaatcatgtttgagtaaatggtttaatagttacataaaatcattttctcatt 22887676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 251
Target Start/End: Complemental strand, 10359717 - 10359634
Alignment:
Q  168 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    ||||||||||||||||  || |||| |||||||| || ||||| |||||  ||||| |||||||  ||||| ||||||||||||    
T  10359717 tatgaagcacggacacctttcggattagacgtgtctcggtgtcggacacaagtcgtatccgacatcgacacctataattacact 10359634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 249
Target Start/End: Complemental strand, 598327 - 598245
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattaca 249  Q
    ||||||||||||||||||  | |||| || |||||  | ||||| ||||||||||||||| ||||| ||||| || |||||||    
T  598327 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacttacaattaca 598245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 237
Target Start/End: Original strand, 11665370 - 11665439
Alignment:
Q  168 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgaca 237  Q
    ||||||||||||||| || | | || ||| ||||||| ||||| |||||||||||||| |||||| ||||    
T  11665370 tatgaagcacggacattcctcgtattagatgtgtttcggtgtcggacacgtgtcgtgttcgacaccgaca 11665439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 21880272 - 21880187
Alignment:
Q  166 tctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    |||||||||||||||||||  | |||| || |||||    ||||| |||| |||||||||||||||| ||||| | ||||||||||    
T  21880272 tctatgaagcacggacacttctcggattaggcgtgtcctggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacact 21880187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 25482022 - 25481937
Alignment:
Q  166 tctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    ||||||||||||||| |||||||| || |  ||||||||  |||| ||||| | |||||||||||||  |||| | ||||||||||    
T  25482022 tctatgaagcacggatactctttgaattaagcgtgtttcaatgtcggacacatatcgtgtccgacaccaacacttgtaattacact 25481937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 232
Target Start/End: Original strand, 43027404 - 43027469
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacac 232  Q
    ||||||||||||||||||| | |||| || |||||  | ||||| ||||||||||||||| |||||    
T  43027404 ctatgaagcacggacactcatcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacac 43027469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 22805856 - 22805824
Alignment:
Q  6 aagcattattcattcacaaactataatcatgtt 38  Q
    ||||||||||||||| |||||||||||||||||    
T  22805856 aagcattattcattctcaaactataatcatgtt 22805824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 22840609 - 22840573
Alignment:
Q  2 acagaagcattattcattcacaaactataatcatgtt 38  Q
    |||||||||| ||| ||||||||||||||||||||||    
T  22840609 acagaagcatcatttattcacaaactataatcatgtt 22840573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 22842721 - 22842685
Alignment:
Q  2 acagaagcattattcattcacaaactataatcatgtt 38  Q
    ||||||||||| ||||||||||||| |||||||||||    
T  22842721 acagaagcattgttcattcacaaacaataatcatgtt 22842685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 22874361 - 22874305
Alignment:
Q  46 aagtgaaatcatgtttgagtaaataattaaatagatacatgaaagcattttctcatt 102  Q
    ||||||| |||||||||||||| || || ||||||||||| ||||| ||| ||||||    
T  22874361 aagtgaattcatgtttgagtaagtagtttaatagatacatcaaagcttttactcatt 22874305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 22886046 - 22886010
Alignment:
Q  2 acagaagcattattcattcacaaactataatcatgtt 38  Q
    |||||||||| |||||||| |||||||||||||||||    
T  22886046 acagaagcatgattcattctcaaactataatcatgtt 22886010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 238
Target Start/End: Complemental strand, 24339773 - 24339701
Alignment:
Q  166 tctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 238  Q
    |||||||||||||| ||||| | |||| || |||||  | ||||| || |||||||||||||||||| |||||    
T  24339773 tctatgaagcacgggcactcctcggattaggcgtgtcccggtgtcggatacgtgtcgtgtccgacaccgacac 24339701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 251
Target Start/End: Complemental strand, 41020607 - 41020531
Alignment:
Q  175 cacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    |||||||| ||||||||| ||||||||  | |||| ||| | ||||||||| | |||| ||| ||||||||||||||    
T  41020607 cacggacattctttggattagacgtgtcccggtgttagatatgtgtcgtgttcaacaccgacgcatataattacact 41020531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 238
Target Start/End: Original strand, 5414101 - 5414172
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 238  Q
    ||||||||||||||||||| |||||||||  ||||  | |||||||||||||||||||||||||||||||||    
T  5414101 ctatgaagcacggacactccttggataaggtgtgtccctgtgtcagacacgtgtcgtgtccgacactgacac 5414172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 247
Target Start/End: Original strand, 19097835 - 19097914
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataatta 247  Q
    ||||||||||| |||||||||||| |||| |||||  |||||||||||||||||| ||| |||||| |||| |||||||||    
T  19097835 ctatgaagcacagacactctttgg-taaggcgtgtccccgtgtcagacacgtgtcatgttcgacaccgacaaatataatta 19097914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 35161155 - 35161071
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    |||||||||||||||||| || |||| ||  ||||| | ||||| ||||||||||||||||||| |||| || ||||||||||||    
T  35161155 ctatgaagcacggacacttttcggattaggtgtgttccggtgtcggacacgtgtcgtgtccgactctgatacttataattacact 35161071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 238
Target Start/End: Original strand, 30982808 - 30982878
Alignment:
Q  168 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 238  Q
    ||||||||||||||||||||||||| || |||||  | ||||| ||||||||||||||| ||||| |||||    
T  30982808 tatgaagcacggacactctttggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacac 30982878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 2361914 - 2361999
Alignment:
Q  166 tctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    |||||||||||||||||||| |  ||| ||  |||| || |||||||||||| |||||||||||||| ||||| | ||||||||||    
T  2361914 tctatgaagcacggacactcgtcagattaggtgtgtctcggtgtcagacacgagtcgtgtccgacaccgacacttttaattacact 2361999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 247
Target Start/End: Original strand, 23292926 - 23293006
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataatta 247  Q
    ||||||||||||||||||| | |||| || |||||  | ||||| ||||||||||||||||||||| ||||| | ||||||    
T  23292926 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaatta 23293006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 238
Target Start/End: Complemental strand, 12324038 - 12323968
Alignment:
Q  168 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 238  Q
    |||||||||||||||||| | |||||||  ||||| ||||| || ||||||||| |||||||||| |||||    
T  12324038 tatgaagcacggacactcctcggataaggtgtgttcccgtgccacacacgtgtcatgtccgacaccgacac 12323968  T

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Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 237
Target Start/End: Original strand, 24613630 - 24613700
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgaca 237  Q
    ||||||||||||||||||| | |||| ||||||||    ||||||||||||||||||||| ||||| ||||    
T  24613630 ctatgaagcacggacactcctaggattagacgtgtcctggtgtcagacacgtgtcgtgtctgacaccgaca 24613700  T

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Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 34306743 - 34306828
Alignment:
Q  166 tctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    ||||||||||||| ||| || |  ||| || ||||| || ||||| ||||||||||||||||||||| ||||| | ||||||||||    
T  34306743 tctatgaagcacgaacattcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacact 34306828  T

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Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 49431146 - 49431061
Alignment:
Q  166 tctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    ||||| ||||| |||||||| | ||||||| |||||  | ||||  ||||||||||||||||||||| ||||| | ||||||||||    
T  49431146 tctataaagcatggacactcctcggataaggcgtgtcccggtgttggacacgtgtcgtgtccgacaccgacacttttaattacact 49431061  T

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Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 238
Target Start/End: Complemental strand, 36635450 - 36635378
Alignment:
Q  166 tctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 238  Q
    |||||||||||||||||||||| |||| || |||||  | ||||| ||| ||||||||||| |||||| ||||    
T  36635450 tctatgaagcacggacactcttcggattaggcgtgtcccggtgtctgacgcgtgtcgtgtctgacactcacac 36635378  T

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Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 238
Target Start/End: Original strand, 46083920 - 46083991
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 238  Q
    |||||||||| |||||||| |   ||||| |||||  ||| |||||||||||||||||||||| ||||||||    
T  46083920 ctatgaagcatggacactcctcttataaggcgtgtccccgcgtcagacacgtgtcgtgtccgatactgacac 46083991  T

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Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 212 - 251
Target Start/End: Original strand, 54580008 - 54580047
Alignment:
Q  212 gacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    ||||||||||||||||||||| ||||| ||||||||||||    
T  54580008 gacacgtgtcgtgtccgacaccgacacttataattacact 54580047  T

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Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 251
Target Start/End: Original strand, 10499260 - 10499294
Alignment:
Q  217 gtgtcgtgtccgacactgacacatataattacact 251  Q
    |||||| ||||||||||||||||||||||||||||    
T  10499260 gtgtcgggtccgacactgacacatataattacact 10499294  T

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Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 251
Target Start/End: Original strand, 36509074 - 36509116
Alignment:
Q  209 tcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    |||||||||||||| ||||||| | ||||||||||||||||||    
T  36509074 tcagacacgtgtcgcgtccgacgccgacacatataattacact 36509116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 206 - 251
Target Start/End: Original strand, 8402721 - 8402766
Alignment:
Q  206 gtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    ||||| |||| |||||||||| |||||||| |||||||||||||||    
T  8402721 gtgtcggacaagtgtcgtgtctgacactgagacatataattacact 8402766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 206 - 251
Target Start/End: Original strand, 38846991 - 38847036
Alignment:
Q  206 gtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    ||||| |||||||||||| |||||||||||||| | ||||||||||    
T  38846991 gtgtcggacacgtgtcgtatccgacactgacacttgtaattacact 38847036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 243
Target Start/End: Original strand, 4672025 - 4672101
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatata 243  Q
    ||||||||||| ||||||| |||||| |||| |||| | |||||  |||||| | || |||||||| ||||||||||    
T  4672025 ctatgaagcacagacactccttggattagacatgttccagtgtcgaacacgttttgtatccgacaccgacacatata 4672101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 16073513 - 16073429
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    |||||||||| |||||||| | |||| || ||||| |  ||||| |||| || ||||||||||||| ||||| | ||||||||||    
T  16073513 ctatgaagcatggacactcctcggattaggcgtgtcttagtgtcggacatgtatcgtgtccgacaccgacacttgtaattacact 16073429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 243
Target Start/End: Original strand, 23861369 - 23861445
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatata 243  Q
    |||||||||||| |||||||||| || || ||||| |  ||| |||||| ||||||| || ||||| ||||||||||    
T  23861369 ctatgaagcacgaacactctttgaattaggcgtgtcttggtgacagacatgtgtcgtatctgacaccgacacatata 23861445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 28964188 - 28964272
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    |||||||||| |||||||| | |||| || |||||  | ||||| || | |||||||||||||||| ||||| | ||||||||||    
T  28964188 ctatgaagcatggacactcctcggattaggcgtgtcccagtgtcggatatgtgtcgtgtccgacacagacacttgtaattacact 28964272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 35157925 - 35158009
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    ||||||||||||||||||  | |||| |  |||||| | ||||  |||| |||||||||| ||||| ||||| ||||||||||||    
T  35157925 ctatgaagcacggacacttctcggattaagcgtgttccggtgttggacatgtgtcgtgtcagacaccgacacttataattacact 35158009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 45469 - 45554
Alignment:
Q  166 tctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    ||||||||||||| ||| ||||||||| || | |||  | ||||||||||||||||||||||||||| ||||| | ||||||||||    
T  45469 tctatgaagcacgtacaatctttggattaggcatgtcgcggtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacact 45554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 232
Target Start/End: Original strand, 5926 - 5990
Alignment:
Q  168 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacac 232  Q
    ||||| |||||||||||| ||||||||| ||||| || |||||||||||||||||||| ||||||    
T  5926 tatgaggcacggacactccttggataaggcgtgtctctgtgtcagacacgtgtcgtgttcgacac 5990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 8918 - 8833
Alignment:
Q  166 tctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    ||||||||||||||| |||| |  ||| || ||||| || ||||| ||||||||||||||||||||| ||||| | ||||||||||    
T  8918 tctatgaagcacggagactcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacact 8833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 232
Target Start/End: Complemental strand, 14649 - 14581
Alignment:
Q  164 attctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacac 232  Q
    ||||||||||||||| |||||| || ||| || ||||| || ||||| |||||||||||||||||||||    
T  14649 attctatgaagcacgtacactccttcgattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacac 14581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 206 - 251
Target Start/End: Complemental strand, 70358 - 70313
Alignment:
Q  206 gtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    ||||| ||||||||||||||||||||| ||||| ||||||||||||    
T  70358 gtgtcggacacgtgtcgtgtccgacaccgacacttataattacact 70313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 3427 - 3343
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    ||||||||||||||||||| | |||| || |||||  | |||||   |||||||| |||||||||||||||| | ||||||||||    
T  3427 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtccaccacgtgtcttgtccgacactgacacttgtaattacact 3343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 90962 - 90878
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    |||||||||||  |||||| |||||| || |||||||  ||||| ||||||||| ||||| ||||  |||| |||||||||||||    
T  90962 ctatgaagcacatacactcattggattaggcgtgttttggtgtcggacacgtgttgtgtctgacatcgacatatataattacact 90878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 251
Target Start/End: Original strand, 403 - 486
Alignment:
Q  168 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 251  Q
    |||||||||||||||||| | |||| ||  ||||  | ||||| |||||| |||||||||||||| ||||| | ||||||||||    
T  403 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacttgtaattacact 486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 249
Target Start/End: Original strand, 4976 - 5058
Alignment:
Q  167 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattaca 249  Q
    ||||||||||| ||||||| | |||| || | ||| ||  |||| ||||||||||||||||||||| ||||| | ||||||||    
T  4976 ctatgaagcacagacactcctcggattaggcatgtctcaatgtcggacacgtgtcgtgtccgacaccgacacttgtaattaca 5058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 232
Target Start/End: Complemental strand, 241725 - 241659
Alignment:
Q  166 tctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacac 232  Q
    |||||||||||||||||||  | |||| || |||||  | ||||| |||||||||||||||||||||    
T  241725 tctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacac 241659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 238
Target Start/End: Complemental strand, 13523 - 13454
Alignment:
Q  169 atgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 238  Q
    ||||||||||||||||| |||||| ||  ||||    ||||||||| ||||||||||||||||| |||||    
T  13523 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacac 13454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 238
Target Start/End: Original strand, 21804 - 21873
Alignment:
Q  169 atgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 238  Q
    ||||||||||||||||| |||||| ||  ||||    ||||||||| ||||||||||||||||| |||||    
T  21804 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacac 21873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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