View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5719-Insertion-6 (Length: 320)
Name: NF5719-Insertion-6
Description: NF5719
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5719-Insertion-6 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 301; Significance: 1e-169; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 8 - 320
Target Start/End: Original strand, 39779607 - 39779918
Alignment:
| Q |
8 |
atattcttatttacattattctcctttgtgttacagtacaactagcaatatttccctcttttactcttgagaattctttggagaagaagaaggaagacaa |
107 |
Q |
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| T |
39779607 |
atattcttatttacattattctcctttgtgttacagtacaattagcaatatttccctcttttactcttgagaattctttggagaagaagaaggaagacaa |
39779706 |
T |
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| Q |
108 |
aaacgaaattcccactctcattattgatcaaggtatgatcttgagctgaaaagtgcatacttgtttgatatatgtatagtgtctttcttgtccagagtat |
207 |
Q |
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| T |
39779707 |
aaacgaaattcccactctcattattgatcaaggtatgatcttgagctgaaaagtgcatacttgtttgatatatgtatagtgtctttcttgtccagagtat |
39779806 |
T |
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| Q |
208 |
gaaataaagtgttatcattttctttttcaatcttgattttgtgtaagagagaaaagtggtaatcaaggagataatgaaaggtcaatcttgattttataga |
307 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
39779807 |
gaaataaagtgttatcattttctttttcaatcttgattttgtgtaagagagaaaagtggtaatcaaggagataatgaaaggtcaatcttga-tttataga |
39779905 |
T |
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| Q |
308 |
gtaactataacta |
320 |
Q |
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| T |
39779906 |
gtaactataacta |
39779918 |
T |
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