View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5719_low_16 (Length: 253)

Name: NF5719_low_16
Description: NF5719
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5719_low_16
NF5719_low_16
[»] chr6 (24 HSPs)
chr6 (13-213)||(8131738-8131938)
chr6 (133-209)||(2488839-2488914)
chr6 (131-209)||(23610271-23610349)
chr6 (130-210)||(7581083-7581164)
chr6 (138-209)||(4577741-4577812)
chr6 (132-209)||(7977097-7977175)
chr6 (131-209)||(17534887-17534965)
chr6 (176-213)||(20729037-20729074)
chr6 (176-209)||(29646500-29646533)
chr6 (130-213)||(3294803-3294887)
chr6 (131-207)||(34268322-34268398)
chr6 (83-126)||(2236821-2236864)
chr6 (131-202)||(16406609-16406680)
chr6 (130-208)||(18904304-18904383)
chr6 (130-208)||(32621534-32621613)
chr6 (130-212)||(1435848-1435930)
chr6 (176-210)||(3795724-3795758)
chr6 (176-210)||(7425452-7425486)
chr6 (223-253)||(8131693-8131723)
chr6 (131-212)||(32670002-32670084)
chr6 (131-209)||(32788806-32788884)
chr6 (130-171)||(5944465-5944506)
chr6 (130-210)||(22997375-22997456)
chr6 (130-210)||(23790945-23791026)
[»] chr4 (42 HSPs)
chr4 (130-213)||(44568167-44568250)
chr4 (133-209)||(27091425-27091500)
chr4 (57-126)||(12499068-12499138)
chr4 (57-126)||(36061070-36061140)
chr4 (58-126)||(44362966-44363035)
chr4 (59-126)||(18879294-18879362)
chr4 (130-210)||(43905749-43905829)
chr4 (131-207)||(51890837-51890913)
chr4 (57-126)||(1351320-1351390)
chr4 (131-209)||(2629619-2629697)
chr4 (57-126)||(6216250-6216320)
chr4 (131-205)||(29406397-29406471)
chr4 (131-209)||(31852389-31852467)
chr4 (131-209)||(40486481-40486559)
chr4 (168-210)||(45312207-45312249)
chr4 (130-210)||(4700888-4700969)
chr4 (130-210)||(10402480-10402561)
chr4 (130-210)||(30057261-30057342)
chr4 (130-210)||(17815376-17815456)
chr4 (131-207)||(23924826-23924902)
chr4 (131-207)||(49264566-49264642)
chr4 (145-209)||(51759611-51759675)
chr4 (130-208)||(30305838-30305917)
chr4 (130-208)||(36099135-36099214)
chr4 (131-209)||(11294790-11294868)
chr4 (176-210)||(13564218-13564252)
chr4 (176-210)||(37935947-37935981)
chr4 (131-209)||(38848072-38848150)
chr4 (176-210)||(48569126-48569160)
chr4 (159-197)||(49903649-49903687)
chr4 (130-210)||(2222578-2222659)
chr4 (180-213)||(10406976-10407009)
chr4 (136-209)||(28465726-28465799)
chr4 (130-210)||(40051661-40051742)
chr4 (130-206)||(41137874-41137951)
chr4 (168-209)||(46791160-46791201)
chr4 (130-210)||(55021593-55021674)
chr4 (130-210)||(55853058-55853139)
chr4 (166-210)||(2688171-2688215)
chr4 (131-207)||(12625869-12625945)
chr4 (166-210)||(38228512-38228556)
chr4 (86-126)||(49888227-49888267)
[»] chr2 (24 HSPs)
chr2 (57-126)||(35021026-35021095)
chr2 (130-209)||(23919429-23919508)
chr2 (131-202)||(3596290-3596361)
chr2 (131-209)||(13242683-13242761)
chr2 (57-126)||(40609863-40609933)
chr2 (131-192)||(1964393-1964454)
chr2 (130-210)||(11189967-11190048)
chr2 (130-210)||(15069749-15069830)
chr2 (130-210)||(32854571-32854652)
chr2 (130-203)||(40363029-40363102)
chr2 (131-209)||(1027585-1027663)
chr2 (131-209)||(20919650-20919728)
chr2 (135-209)||(22333819-22333893)
chr2 (176-210)||(29772228-29772262)
chr2 (176-210)||(38387741-38387775)
chr2 (176-210)||(41566848-41566882)
chr2 (180-213)||(4562699-4562732)
chr2 (176-209)||(17524923-17524956)
chr2 (130-210)||(18254628-18254709)
chr2 (176-209)||(25562609-25562642)
chr2 (130-210)||(30390319-30390400)
chr2 (130-210)||(33228883-33228964)
chr2 (180-209)||(35797977-35798006)
chr2 (13-49)||(40848553-40848589)
[»] chr3 (53 HSPs)
chr3 (130-208)||(15085636-15085715)
chr3 (57-126)||(25189603-25189673)
chr3 (130-210)||(3748552-3748633)
chr3 (130-210)||(29098731-29098811)
chr3 (130-213)||(45647342-45647426)
chr3 (57-126)||(39450673-39450743)
chr3 (131-209)||(47098556-47098634)
chr3 (130-202)||(2106063-2106136)
chr3 (130-210)||(25883938-25884019)
chr3 (131-207)||(24303430-24303506)
chr3 (131-209)||(38949714-38949792)
chr3 (131-193)||(49577409-49577471)
chr3 (168-209)||(9685073-9685114)
chr3 (131-204)||(46844928-46845001)
chr3 (130-210)||(48722283-48722364)
chr3 (131-207)||(28951756-28951832)
chr3 (130-213)||(30779514-30779598)
chr3 (131-207)||(32401531-32401606)
chr3 (130-210)||(40212410-40212490)
chr3 (130-213)||(52309060-52309141)
chr3 (130-208)||(27329884-27329963)
chr3 (131-202)||(35849521-35849592)
chr3 (130-208)||(41253701-41253780)
chr3 (130-208)||(46767382-46767461)
chr3 (130-208)||(51879134-51879213)
chr3 (131-209)||(4227696-4227774)
chr3 (131-209)||(5173962-5174040)
chr3 (176-210)||(6488210-6488244)
chr3 (176-210)||(17218574-17218608)
chr3 (131-209)||(19222538-19222616)
chr3 (176-210)||(22501881-22501915)
chr3 (131-209)||(27837306-27837383)
chr3 (176-210)||(33606890-33606924)
chr3 (176-210)||(34757602-34757636)
chr3 (57-126)||(38018301-38018371)
chr3 (57-126)||(38216288-38216358)
chr3 (131-209)||(41411579-41411657)
chr3 (176-210)||(44764520-44764554)
chr3 (131-209)||(48515337-48515415)
chr3 (131-209)||(49443375-49443453)
chr3 (57-126)||(49726456-49726525)
chr3 (131-209)||(54408502-54408580)
chr3 (130-210)||(5641564-5641645)
chr3 (180-213)||(7920410-7920443)
chr3 (130-163)||(13874860-13874893)
chr3 (130-210)||(39719974-39720055)
chr3 (132-208)||(41710624-41710701)
chr3 (130-210)||(41936357-41936438)
chr3 (130-210)||(46754567-46754648)
chr3 (176-213)||(49194639-49194676)
chr3 (130-210)||(53432687-53432768)
chr3 (177-205)||(7557151-7557179)
chr3 (168-212)||(54288085-54288129)
[»] chr1 (38 HSPs)
chr1 (131-209)||(1247295-1247373)
chr1 (131-210)||(33133881-33133961)
chr1 (132-210)||(49907321-49907400)
chr1 (131-193)||(621617-621679)
chr1 (57-126)||(15061503-15061572)
chr1 (131-209)||(17487566-17487644)
chr1 (57-126)||(42508308-42508378)
chr1 (57-126)||(44166511-44166581)
chr1 (168-209)||(24875048-24875089)
chr1 (131-206)||(39670784-39670859)
chr1 (131-210)||(50119012-50119091)
chr1 (57-126)||(38275810-38275880)
chr1 (130-210)||(51050229-51050310)
chr1 (130-209)||(23233990-23234070)
chr1 (131-210)||(16997210-16997289)
chr1 (131-206)||(23991219-23991294)
chr1 (176-207)||(37280786-37280817)
chr1 (176-210)||(7166177-7166211)
chr1 (176-210)||(11215087-11215121)
chr1 (176-210)||(18467148-18467182)
chr1 (176-210)||(19011441-19011475)
chr1 (176-210)||(22563472-22563506)
chr1 (131-209)||(33843147-33843225)
chr1 (131-209)||(33950754-33950832)
chr1 (151-193)||(43508667-43508709)
chr1 (176-210)||(45333662-45333696)
chr1 (176-210)||(45517218-45517252)
chr1 (176-210)||(50899453-50899487)
chr1 (130-210)||(6702615-6702696)
chr1 (176-209)||(7491846-7491879)
chr1 (136-209)||(11860087-11860160)
chr1 (130-210)||(21265695-21265776)
chr1 (180-213)||(32970748-32970781)
chr1 (131-208)||(36666529-36666606)
chr1 (131-207)||(26824231-26824307)
chr1 (131-207)||(31124592-31124668)
chr1 (178-210)||(40520927-40520959)
chr1 (176-208)||(41620464-41620496)
[»] chr7 (31 HSPs)
chr7 (130-210)||(21066925-21067005)
chr7 (57-126)||(42457389-42457459)
chr7 (130-213)||(13730045-13730128)
chr7 (130-193)||(23817227-23817290)
chr7 (131-209)||(27788309-27788387)
chr7 (131-209)||(27791465-27791543)
chr7 (130-210)||(15238928-15239009)
chr7 (57-126)||(20896474-20896543)
chr7 (57-125)||(44858023-44858092)
chr7 (130-213)||(3392506-3392590)
chr7 (176-210)||(9697841-9697875)
chr7 (143-209)||(12935792-12935858)
chr7 (176-210)||(13720856-13720890)
chr7 (135-209)||(15021163-15021237)
chr7 (176-210)||(19331450-19331484)
chr7 (176-210)||(27424924-27424958)
chr7 (130-207)||(32047128-32047206)
chr7 (180-210)||(35835649-35835679)
chr7 (176-210)||(48119556-48119590)
chr7 (176-210)||(48719885-48719919)
chr7 (130-210)||(16200598-16200679)
chr7 (130-210)||(24188509-24188590)
chr7 (131-212)||(25155581-25155662)
chr7 (130-210)||(31769462-31769543)
chr7 (168-209)||(47542929-47542970)
chr7 (168-212)||(21576936-21576980)
chr7 (130-210)||(36114292-36114372)
chr7 (131-203)||(45284777-45284849)
chr7 (58-126)||(46303617-46303685)
chr7 (130-210)||(47194375-47194455)
chr7 (130-213)||(48674509-48674593)
[»] scaffold0157 (1 HSPs)
scaffold0157 (57-126)||(21339-21409)
[»] scaffold0116 (1 HSPs)
scaffold0116 (131-205)||(16133-16207)
[»] chr8 (34 HSPs)
chr8 (57-126)||(3207815-3207885)
chr8 (57-126)||(38255358-38255428)
chr8 (131-209)||(38283164-38283242)
chr8 (60-126)||(24587293-24587360)
chr8 (130-208)||(37708730-37708809)
chr8 (52-126)||(39186354-39186429)
chr8 (130-207)||(8183359-8183437)
chr8 (130-210)||(16449164-16449245)
chr8 (130-210)||(23178841-23178922)
chr8 (130-210)||(5683793-5683873)
chr8 (130-210)||(22274562-22274642)
chr8 (130-210)||(39674009-39674089)
chr8 (130-208)||(36035131-36035210)
chr8 (180-210)||(5038648-5038678)
chr8 (176-210)||(8265354-8265388)
chr8 (132-210)||(11236875-11236953)
chr8 (176-210)||(16432078-16432112)
chr8 (57-126)||(20771478-20771548)
chr8 (57-126)||(20781272-20781342)
chr8 (131-209)||(25824854-25824932)
chr8 (130-210)||(26395403-26395485)
chr8 (130-207)||(33810679-33810757)
chr8 (176-210)||(39169571-39169605)
chr8 (131-209)||(43846975-43847053)
chr8 (130-163)||(4293919-4293952)
chr8 (130-210)||(5328517-5328598)
chr8 (130-203)||(10083202-10083275)
chr8 (131-200)||(12770408-12770477)
chr8 (176-213)||(23858283-23858320)
chr8 (130-210)||(34894408-34894489)
chr8 (180-213)||(37291012-37291045)
chr8 (168-201)||(44156788-44156821)
chr8 (130-162)||(18577149-18577181)
chr8 (130-210)||(41865033-41865113)
[»] chr5 (24 HSPs)
chr5 (131-203)||(8571833-8571905)
chr5 (130-208)||(3740993-3741072)
chr5 (131-201)||(7171768-7171838)
chr5 (168-209)||(5908270-5908311)
chr5 (130-210)||(11188632-11188713)
chr5 (130-210)||(17545122-17545203)
chr5 (131-210)||(22732316-22732396)
chr5 (131-210)||(4068022-4068101)
chr5 (131-206)||(11535630-11535705)
chr5 (131-201)||(28758377-28758448)
chr5 (57-126)||(13361190-13361260)
chr5 (176-210)||(22569195-22569229)
chr5 (176-210)||(28308320-28308354)
chr5 (176-206)||(29646068-29646098)
chr5 (176-210)||(36735958-36735992)
chr5 (130-210)||(6558840-6558921)
chr5 (180-213)||(10804176-10804209)
chr5 (130-163)||(11246520-11246553)
chr5 (168-209)||(11313555-11313596)
chr5 (168-209)||(19655924-19655965)
chr5 (176-209)||(24477910-24477943)
chr5 (142-210)||(9125713-9125781)
chr5 (131-199)||(11498670-11498738)
chr5 (142-210)||(34208425-34208493)
[»] scaffold0199 (1 HSPs)
scaffold0199 (136-210)||(8864-8939)
[»] scaffold0246 (1 HSPs)
scaffold0246 (131-209)||(24420-24498)
[»] scaffold0154 (1 HSPs)
scaffold0154 (131-209)||(28773-28851)
[»] scaffold0445 (1 HSPs)
scaffold0445 (130-210)||(3964-4045)
[»] scaffold0122 (1 HSPs)
scaffold0122 (57-126)||(17580-17650)
[»] scaffold0088 (1 HSPs)
scaffold0088 (130-210)||(10776-10857)
[»] scaffold0011 (1 HSPs)
scaffold0011 (131-163)||(15357-15389)


Alignment Details
Target: chr6 (Bit Score: 165; Significance: 2e-88; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 13 - 213
Target Start/End: Complemental strand, 8131938 - 8131738
Alignment:
Q  13 aatatactctactttcacggtaacgtatctaattagtcgtccccattttaaaatttgacagttttggtcatccatcatattttttaactttaaaaatgtt 112  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  8131938 aatatactctactttcacggtaacatatctaattagtcgtccccattttaaaatttgacagttttggtcatccatcatattttttaacattaaaaatgtt 8131839  T
Q  113 atgtgataaatttttagatatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctacttaa 212  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||| ||||||||||||||||| ||||| ||||||| ||||||||    
T  8131838 atgtgataaatttttagatatgcaggggccggggttcaaaccccagacatccaatttctccatatttaattgtgtgaactccaaccactagactacttaa 8131739  T
Q  213 c 213  Q
    |    
T  8131738 c 8131738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 209
Target Start/End: Complemental strand, 2488914 - 2488839
Alignment:
Q  133 tgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    |||||||||||| |||| |||||| ||||||  | ||||||||||| |||||||||||||| |||||||||||||||    
T  2488914 tgcaggggtcggagttcgaaccccggacatcccacttcttcatatt-aattgtgtgagctctagccactaggctact 2488839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 23610349 - 23610271
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    ||||||||||||||||||||||| |  |||| |  | ||||||| | ||||||||| ||||||||||||||||||||||    
T  23610349 tatgcaggggtcggggttcaaacgctggacaccccacttcttcacaattaattgtgcgagctccagccactaggctact 23610271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 7581083 - 7581164
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaa-ttgtgtgagctccagccactaggctactt 210  Q
    |||||||||||| ||||||| ||| ||||||| |||| |||| || | |||| |||||||||||| ||||||||||||||||    
T  7581083 atatgcaggggttggggttcgaacgccagacaccttacttctccacaattaaattgtgtgagctctagccactaggctactt 7581164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 4577812 - 4577741
Alignment:
Q  138 gggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    |||||||||||  ||||||||| | |  | ||||||| ||||||||||||||||||||| ||||||||||||    
T  4577812 gggtcggggtttgaaccccagataccccacttcttcaaatttaattgtgtgagctccagacactaggctact 4577741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 7977097 - 7977175
Alignment:
Q  132 atgcaggggtcggggttcaaaccccagacatcttatttcttcatattt-aattgtgtgagctccagccactaggctact 209  Q
    ||||||||||||||||| ||||||  ||||| ||| |||||| ||||| || ||||||||||| | |||||||||||||    
T  7977097 atgcaggggtcggggtttaaaccctggacattttacttcttcgtatttaaaatgtgtgagctctaaccactaggctact 7977175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 17534887 - 17534965
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    |||||||||| |||||||| ||| || |||| || | |||| || ||||||||||||||| || |||||||||||||||    
T  17534887 tatgcaggggccggggttcgaactccggacacctgacttctccacatttaattgtgtgagttctagccactaggctact 17534965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 20729037 - 20729074
Alignment:
Q  176 atttaattgtgtgagctccagccactaggctacttaac 213  Q
    |||||||||||||||||| |||||||||||||||||||    
T  20729037 atttaattgtgtgagctctagccactaggctacttaac 20729074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 209
Target Start/End: Complemental strand, 29646533 - 29646500
Alignment:
Q  176 atttaattgtgtgagctccagccactaggctact 209  Q
    ||||||||||||||||||||||||||||||||||    
T  29646533 atttaattgtgtgagctccagccactaggctact 29646500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 213
Target Start/End: Original strand, 3294803 - 3294887
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttca-tatttaattgtgtgagctccagccactaggctacttaac 213  Q
    |||||||||||||||||||| |||||| |||| |  | |||||||  ||| ||||||||||| || ||||||||||||| |||||    
T  3294803 atatgcaggggtcggggttcgaaccccggacaccccacttcttcacaattaaattgtgtgagttctagccactaggctatttaac 3294887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 34268322 - 34268398
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggcta 207  Q
    |||||||||||| |||||| ||||||  ||| | || ||||||| | |||||||||||||||| ||||| |||||||    
T  34268322 tatgcaggggtcagggttcgaaccccgaacaccctacttcttcacaattaattgtgtgagctctagccattaggcta 34268398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 126
Target Start/End: Original strand, 2236821 - 2236864
Alignment:
Q  83 tccatcatattttttaactttaaaaatgttatgtgataaatttt 126  Q
    |||||||||||||| |||| ||||||||| ||||||||||||||    
T  2236821 tccatcatatttttgaactataaaaatgtgatgtgataaatttt 2236864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 202
Target Start/End: Original strand, 16406609 - 16406680
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccacta 202  Q
    ||||||||||  ||||||  ||||||||||| |||| ||||  |||||||| |||||||| |||||||||||    
T  16406609 tatgcaggggctggggtttgaaccccagacaccttacttctctatatttaaatgtgtgagttccagccacta 16406680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 208
Target Start/End: Original strand, 18904304 - 18904383
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatattt-aattgtgtgagctccagccactaggctac 208  Q
    |||||||||||||||||||| |||||| |||| |  | |||| || |||| || ||||||||||||||||||||| ||||    
T  18904304 atatgcaggggtcggggttcgaaccccggacaccccacttctccacatttaaaatgtgtgagctccagccactagactac 18904383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 208
Target Start/End: Complemental strand, 32621613 - 32621534
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaat-tgtgtgagctccagccactaggctac 208  Q
    ||||||||||| |||||||| || |||||||| |  | |||| || ||||||  ||||||||||||||||||||||||||    
T  32621613 atatgcaggggccggggttcgaatcccagacaccccacttctccacatttaaaatgtgtgagctccagccactaggctac 32621534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 212
Target Start/End: Original strand, 1435848 - 1435930
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctacttaa 212  Q
    ||||||||||| | |||||| |||||| |||||   | |||| || |||||||||||||||||| |||||| || ||||||||    
T  1435848 atatgcaggggccagggttcgaaccccggacattccacttctccacatttaattgtgtgagctctagccaccagactacttaa 1435930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Complemental strand, 3795758 - 3795724
Alignment:
Q  176 atttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||||| ||||||||||||||||    
T  3795758 atttaattgtgtgagctctagccactaggctactt 3795724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Original strand, 7425452 - 7425486
Alignment:
Q  176 atttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||||| ||||||||||||||||    
T  7425452 atttaattgtgtgagctctagccactaggctactt 7425486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 253
Target Start/End: Complemental strand, 8131723 - 8131693
Alignment:
Q  223 ttgcattgagtggcaaaattctcttggagat 253  Q
    |||||||||||||||||||||||||||||||    
T  8131723 ttgcattgagtggcaaaattctcttggagat 8131693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 212
Target Start/End: Complemental strand, 32670084 - 32670002
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatattta-attgtgtgagctccagccactaggctacttaa 212  Q
    ||||||||||  ||||||| |||||| |||| | || |||| |||||||| | |||||||||||||  |||||||||||||||    
T  32670084 tatgcaggggcaggggttcgaacccctgacaccctacttctccatatttataatgtgtgagctccaaacactaggctacttaa 32670002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 32788884 - 32788806
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    ||||||||||| ||||||| ||| || |||| |  | |||| || |||||||||| ||||||| |||||||||||||||    
T  32788884 tatgcaggggttggggttcgaactccggacaccccacttctacacatttaattgtatgagctctagccactaggctact 32788806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 5944465 - 5944506
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttct 171  Q
    |||||||||||||||||||||||| ||||||| | |||||||    
T  5944465 atatgcaggggtcggggttcaaactccagacaccctatttct 5944506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 22997375 - 22997456
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaa-ttgtgtgagctccagccactaggctactt 210  Q
    ||||| |||||||||||||| |||||| |||| | || |||| || | |||| |||||||||||| ||||||||| ||||||    
T  22997375 atatgtaggggtcggggttcgaaccccggacaccctacttctccacaattaaattgtgtgagctctagccactagactactt 22997456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 210
Target Start/End: Complemental strand, 23791026 - 23790945
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaa-ttgtgtgagctccagccactaggctactt 210  Q
    ||||| |||||||||||||| |||||| |||| | || |||| || | |||| |||||||||||| ||||||||| ||||||    
T  23791026 atatgtaggggtcggggttcgaaccccggacaccctacttctccacaattaaattgtgtgagctctagccactagactactt 23790945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 130 - 213
Target Start/End: Complemental strand, 44568250 - 44568167
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctacttaac 213  Q
    |||||||||||||||||||| ||| | ||||| || | |||| ||||||||||||||||||||| ||||||||| |||||||||    
T  44568250 atatgcaggggtcggggttcgaactcgagacacctcacttctccatatttaattgtgtgagctcaagccactagactacttaac 44568167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 209
Target Start/End: Complemental strand, 27091500 - 27091425
Alignment:
Q  133 tgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    |||||||||||| |||| |||||| ||||||  | ||||||||||| |||||||||||||| |||||||||||||||    
T  27091500 tgcaggggtcggagttcgaaccccggacatcccacttcttcatatt-aattgtgtgagctctagccactaggctact 27091425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 12499068 - 12499138
Alignment:
Q  57 attttaaaatttgacagttttggtca-tccatcatattttttaactttaaaaatgttatgtgataaatttt 126  Q
    ||||||||||| |||||||||||||  |||||||||||||| |||| ||||||||| ||||| ||||||||    
T  12499068 attttaaaattcgacagttttggtccctccatcatatttttgaactataaaaatgtgatgtggtaaatttt 12499138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 36061070 - 36061140
Alignment:
Q  57 attttaaaatttgacagttttggtca-tccatcatattttttaactttaaaaatgttatgtgataaatttt 126  Q
    ||||||||||| |||||||||||||  |||||||||||||| |||| ||||||||| ||| ||||||||||    
T  36061070 attttaaaattcgacagttttggtccctccatcatatttttgaactataaaaatgtgatgcgataaatttt 36061140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 126
Target Start/End: Original strand, 44362966 - 44363035
Alignment:
Q  58 ttttaaaatttgacagttttggtca-tccatcatattttttaactttaaaaatgttatgtgataaatttt 126  Q
    |||||||| | |||||||||||||  |||||||||||||| |||| ||||||||| ||||||||||||||    
T  44362966 ttttaaaactcgacagttttggtccctccatcatatttttgaactataaaaatgtgatgtgataaatttt 44363035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 18879362 - 18879294
Alignment:
Q  59 tttaaaatttgacagttttggtca-tccatcatattttttaactttaaaaatgttatgtgataaatttt 126  Q
    |||||||||||||| ||||||||  |||||||||||||| ||||  ||||||||||| |||||||||||    
T  18879362 tttaaaatttgacaattttggtccctccatcatatttttgaactaaaaaaatgttatttgataaatttt 18879294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 43905749 - 43905829
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||| ||||||||| |||||| |||| |  | |||| ||  ||||||||||||||||| ||||||||||||||||    
T  43905749 atatgcagggatcggggttcgaaccccggacaccccacttctccacgtttaattgtgtgagctctagccactaggctactt 43905829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 51890837 - 51890913
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggcta 207  Q
    |||||||||| |||||||| |||||| |||| |  | |||| || |||||||||||||||||| |||||||||||||    
T  51890837 tatgcaggggccggggttcgaaccccggacaccccacttctccacatttaattgtgtgagctctagccactaggcta 51890913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 1351320 - 1351390
Alignment:
Q  57 attttaaaatttgacagttttggtca-tccatcatattttttaactttaaaaatgttatgtgataaatttt 126  Q
    ||||||||||| |||| ||||||||  || ||||||||||| |||| ||||||||| ||||||||||||||    
T  1351320 attttaaaattcgacaattttggtccctctatcatatttttgaactataaaaatgtgatgtgataaatttt 1351390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 2629619 - 2629697
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    ||||||||||||||||||| ||||||  ||| |  | |||| || |||||||||||||||||| ||||| |||||||||    
T  2629619 tatgcaggggtcggggttcgaaccccgaacaccccacttctccacatttaattgtgtgagctctagccattaggctact 2629697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 6216250 - 6216320
Alignment:
Q  57 attttaaaatttgacagttttggtca-tccatcatattttttaactttaaaaatgttatgtgataaatttt 126  Q
    ||||||||||| || ||||||||||  |||||||||||||| |||| |||||| || ||||||||||||||    
T  6216250 attttaaaattcgatagttttggtccctccatcatatttttgaactataaaaaggtgatgtgataaatttt 6216320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 205
Target Start/End: Original strand, 29406397 - 29406471
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggc 205  Q
    ||||||||||||||||||| ||| || |||| |  | |||| || |||||||||||||||||||| |||||||||    
T  29406397 tatgcaggggtcggggttcgaactccggacaacccacttctccacatttaattgtgtgagctccaaccactaggc 29406471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 31852389 - 31852467
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    |||||| ||| || ||||| |||||| |||| |  | |||| ||||||||||||||||||||| |||||||||||||||    
T  31852389 tatgcaagggccgaggttcgaaccccggacaccccacttctccatatttaattgtgtgagctctagccactaggctact 31852467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 40486481 - 40486559
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    |||||||||| |||||||| |||||| ||||    | ||||||| |||||| ||||||||||| |||||||||||||||    
T  40486481 tatgcaggggccggggttcgaaccccggacactccacttcttcacatttaaatgtgtgagctctagccactaggctact 40486559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 210
Target Start/End: Complemental strand, 45312249 - 45312207
Alignment:
Q  168 ttcttcatatttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||||||||||||| ||||| ||||||||||    
T  45312249 ttcttcatatttaattgtgtgagctctagccaataggctactt 45312207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 210
Target Start/End: Complemental strand, 4700969 - 4700888
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcata-tttaattgtgtgagctccagccactaggctactt 210  Q
    ||||||||||||||| || | |||||| ||||||  | |||| || | ||||||||||||||||| ||||||||||||||||    
T  4700969 atatgcaggggtcggtgtccgaaccccggacatcccacttctccacaatttaattgtgtgagctctagccactaggctactt 4700888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 10402480 - 10402561
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaa-ttgtgtgagctccagccactaggctactt 210  Q
    ||||||||||||||| |||| |||||| |||| || | |||| || | |||| |||||||||||| ||||||||||||||||    
T  10402480 atatgcaggggtcggagttcgaaccccggacacctcacttctccacaattaaattgtgtgagctctagccactaggctactt 10402561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 30057261 - 30057342
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttca-tatttaattgtgtgagctccagccactaggctactt 210  Q
    ||||||||||||||||||||||||||| |||| |  | |||| ||  ||| |||||||||||||| | ||||||||||||||    
T  30057261 atatgcaggggtcggggttcaaaccccggacaccccacttctccacaattaaattgtgtgagctctaaccactaggctactt 30057342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 210
Target Start/End: Complemental strand, 17815456 - 17815376
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||||||| || ||| |||| | || |||| ||||||||  ||||||||||  |||||||| |||||||    
T  17815456 atatgcaggggtcggggttcgaatccctgacaccctacttctccatatttatatgtgtgagctttagccactaagctactt 17815376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 23924902 - 23924826
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggcta 207  Q
    |||||||||| |||||||| |||||| ||||  | | |||| || ||||| |||||||||||| |||||||||||||    
T  23924902 tatgcaggggccggggttcgaaccccggacacttcacttctccacatttatttgtgtgagctctagccactaggcta 23924826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 49264566 - 49264642
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggcta 207  Q
    |||||||||| || ||||| |||||| |||| |  | |||| || |||||||||||||||||| |||||||||||||    
T  49264566 tatgcaggggccgaggttcgaaccccggacaccccacttctccacatttaattgtgtgagctctagccactaggcta 49264642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 51759675 - 51759611
Alignment:
Q  145 ggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    ||||| |||||| ||||||| | | || ||||||||||||||||||||| ||||||||| |||||    
T  51759675 ggttcgaaccccggacatctcactgctccatatttaattgtgtgagctctagccactagactact 51759611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 208
Target Start/End: Original strand, 30305838 - 30305917
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaat-tgtgtgagctccagccactaggctac 208  Q
    |||||||||||  ||||||| |||||| |||| || | |||| || ||||||  ||||||||||||||||||||||||||    
T  30305838 atatgcaggggctggggttcgaaccccggacacctcacttctccacatttaaaatgtgtgagctccagccactaggctac 30305917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 208
Target Start/End: Complemental strand, 36099214 - 36099135
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaat-tgtgtgagctccagccactaggctac 208  Q
    ||||||||||| |||||||| |||||| |||| |  | |||| || ||||||  ||||||||||||||||||||||||||    
T  36099214 atatgcaggggccggggttcgaaccccggacaccccacttctccacatttaaaatgtgtgagctccagccactaggctac 36099135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 11294868 - 11294790
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    |||||||||| |||||||| |||||| |||| |  | |||| || |||||| ||| ||||||| |||||||||||||||    
T  11294868 tatgcaggggccggggttcgaaccccggacaccccacttctccacatttaaatgtttgagctctagccactaggctact 11294790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Complemental strand, 13564252 - 13564218
Alignment:
Q  176 atttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||||| ||||||||||||||||    
T  13564252 atttaattgtgtgagctctagccactaggctactt 13564218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Original strand, 37935947 - 37935981
Alignment:
Q  176 atttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||||| ||||||||||||||||    
T  37935947 atttaattgtgtgagctctagccactaggctactt 37935981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 38848150 - 38848072
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    ||||||||||||||||||| |||||| |||| |  | |||| || |||||| ||||||||||| | ||||||| |||||    
T  38848150 tatgcaggggtcggggttcgaaccccggacaccccacttctccacatttaaatgtgtgagctctaaccactagactact 38848072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Complemental strand, 48569160 - 48569126
Alignment:
Q  176 atttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||||| ||||||||||||||||    
T  48569160 atttaattgtgtgagctctagccactaggctactt 48569126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 49903687 - 49903649
Alignment:
Q  159 acatcttatttcttcatatttaattgtgtgagctccagc 197  Q
    ||||| || ||||||||||||||||||||||||||||||    
T  49903687 acatcctacttcttcatatttaattgtgtgagctccagc 49903649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 2222578 - 2222659
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttca-tatttaattgtgtgagctccagccactaggctactt 210  Q
    ||||||||||| |||||||| |||||| |||| |  | |||| ||  ||| |||||||||||||| ||||||||||||||||    
T  2222578 atatgcaggggccggggttcgaaccccggacaccccacttctccacaattaaattgtgtgagctctagccactaggctactt 2222659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 213
Target Start/End: Complemental strand, 10407009 - 10406976
Alignment:
Q  180 aattgtgtgagctccagccactaggctacttaac 213  Q
    |||||||||||||| |||||||||||||||||||    
T  10407009 aattgtgtgagctctagccactaggctacttaac 10406976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 209
Target Start/End: Complemental strand, 28465799 - 28465726
Alignment:
Q  136 aggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    |||||||||||||| ||| ||||||| || | |||| || | |||||||||||||||| ||||| || ||||||    
T  28465799 aggggtcggggttcgaactccagacacctcacttctccacaattaattgtgtgagctctagccattacgctact 28465726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 40051661 - 40051742
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttca-tatttaattgtgtgagctccagccactaggctactt 210  Q
    ||||| |||||| ||||||| ||||||||||| |  | |||| ||  ||| |||||||||||||| ||||||||||||||||    
T  40051661 atatgtaggggtaggggttcgaaccccagacaccccacttctccacaattaaattgtgtgagctctagccactaggctactt 40051742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 206
Target Start/End: Complemental strand, 41137951 - 41137874
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatattt-aattgtgtgagctccagccactaggct 206  Q
    |||||||||||| ||||||| |||| |||||| |  | |||||||||||| || ||| ||||||| ||||||||||||    
T  41137951 atatgcaggggttggggttcgaaccacagacaccccacttcttcatatttaaaatgtttgagctctagccactaggct 41137874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 46791201 - 46791160
Alignment:
Q  168 ttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    ||||||| |||||||| |||||||| ||||||||||||||||    
T  46791201 ttcttcacatttaattctgtgagcttcagccactaggctact 46791160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 55021593 - 55021674
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttca-tatttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||||||| |||||| ||||  | | |||| ||  ||| |||||||||||||| ||||||||| ||||||    
T  55021593 atatgcaggggtcggggttcgaaccccggacacttcacttctccacaattaaattgtgtgagctctagccactagactactt 55021674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 210
Target Start/End: Complemental strand, 55853139 - 55853058
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatattta-attgtgtgagctccagccactaggctactt 210  Q
    ||||||||||| ||| |||| ||||||  |||||  | ||||||| | ||| ||||||||||||| ||||||||||||||||    
T  55853139 atatgcaggggccggtgttcgaaccccgaacatcccacttcttcacaattagattgtgtgagctctagccactaggctactt 55853058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 2688171 - 2688215
Alignment:
Q  166 atttcttcatatttaattgtgtgagctccagccactaggctactt 210  Q
    |||||| || |||||| ||||||||||| ||||||||||||||||    
T  2688171 atttctccacatttaaatgtgtgagctctagccactaggctactt 2688215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 12625869 - 12625945
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggcta 207  Q
    |||||||||||||| |||| ||| || |||| |  | |||| || |||||||||||||| ||| |||||||||||||    
T  12625869 tatgcaggggtcggagttcgaacaccggacaccccacttctccacatttaattgtgtgaactctagccactaggcta 12625945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 38228512 - 38228556
Alignment:
Q  166 atttcttcatatttaattgtgtgagctccagccactaggctactt 210  Q
    |||||| || |||||||||||||||||| | ||||||||||||||    
T  38228512 atttctacacatttaattgtgtgagctctatccactaggctactt 38228556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 49888227 - 49888267
Alignment:
Q  86 atcatattttttaactttaaaaatgttatgtgataaatttt 126  Q
    ||||||||||| |||| ||||||||| ||||||||||||||    
T  49888227 atcatatttttgaactataaaaatgtgatgtgataaatttt 49888267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 2e-17; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 35021026 - 35021095
Alignment:
Q  57 attttaaaatttgacagttttggtcatccatcatattttttaactttaaaaatgttatgtgataaatttt 126  Q
    ||||||||||| |||||||||| || |||||||||||||| |||| ||||||||| ||||||||||||||    
T  35021026 attttaaaattcgacagttttgatcctccatcatatttttgaactataaaaatgtgatgtgataaatttt 35021095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 209
Target Start/End: Complemental strand, 23919508 - 23919429
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    ||||| |||||||||||||| || |||||||| |  |||||| || |||||||||||||| |||||||||||||||||||    
T  23919508 atatggaggggtcggggttcgaatcccagacaccccatttctccacatttaattgtgtgaactccagccactaggctact 23919429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 202
Target Start/End: Original strand, 3596290 - 3596361
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccacta 202  Q
    ||||||||||||||||||| |||||| |||| |  | |||| || |||||||||||||||||||||||||||    
T  3596290 tatgcaggggtcggggttcgaaccccggacaccccacttctccacatttaattgtgtgagctccagccacta 3596361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 13242761 - 13242683
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    ||||||||||||||||||| |||| | |||| || | |||| || ||||||||||||||| ||||| ||||||||||||    
T  13242761 tatgcaggggtcggggttcgaacctcggacacctcacttctccacatttaattgtgtgagatccagtcactaggctact 13242683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 40609933 - 40609863
Alignment:
Q  57 attttaaaatttgacagttttggtca-tccatcatattttttaactttaaaaatgttatgtgataaatttt 126  Q
    |||||||||||||| ||||||| ||  |||||||||||||| |||| ||||||||| ||||||||| ||||    
T  40609933 attttaaaatttgagagttttgatccctccatcatatttttaaactataaaaatgtgatgtgataactttt 40609863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 1964393 - 1964454
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagct 192  Q
    |||||||||| ||||||||||||||| |||| |  | |||| ||||||||||||||||||||    
T  1964393 tatgcaggggccggggttcaaaccccggacaccccacttctccatatttaattgtgtgagct 1964454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 11189967 - 11190048
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttca-tatttaattgtgtgagctccagccactaggctactt 210  Q
    ||||||||||||||||| || |||||||||||||  | |||| ||  ||| |||||||||||||| ||||| ||||||||||    
T  11189967 atatgcaggggtcgggggtcgaaccccagacatcccacttctccacaattaaattgtgtgagctctagccattaggctactt 11190048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 210
Target Start/End: Complemental strand, 15069830 - 15069749
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcat-atttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||||||| |||||| ||||    | |||||||| |||||||||||||||||| ||| | ||||||||||    
T  15069830 atatgcaggggtcggggttcgaaccccggacactccacttcttcataatttaattgtgtgagctctagcgaataggctactt 15069749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 32854571 - 32854652
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaat-tgtgtgagctccagccactaggctactt 210  Q
    ||||||| ||| |||||||| |||||| |||| | || |||| || ||||||  ||||||||||||||||||||||||||||    
T  32854571 atatgcaagggccggggttcgaaccccggacaccctacttctccacatttaaaatgtgtgagctccagccactaggctactt 32854652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 203
Target Start/End: Complemental strand, 40363102 - 40363029
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactag 203  Q
    ||||| |||||||||||||| |||||| ||||   || |||| ||||||||||||||||||||| | |||||||    
T  40363102 atatgtaggggtcggggttcgaacccccgacactctacttctccatatttaattgtgtgagctctaaccactag 40363029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 1027663 - 1027585
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    |||||| ||||| |||||| |||| ||||||   || |||| || ||||||||||||||||||  ||||||||||||||    
T  1027663 tatgcaagggtcagggttcgaacctcagacactctacttctacacatttaattgtgtgagctctggccactaggctact 1027585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 20919650 - 20919728
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    ||||| |||| |||||||| |||||| |||| |  | |||| || |||||||| ||||||||| |||||||||||||||    
T  20919650 tatgctggggccggggttcgaaccccggacaccccacttctccacatttaattatgtgagctctagccactaggctact 20919728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 209
Target Start/End: Original strand, 22333819 - 22333893
Alignment:
Q  135 caggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    ||||||||||||||| || ||  |||| |  | |||| || |||||||||||||||||||||| |||||||||||    
T  22333819 caggggtcggggttcgaagcctggacaccccacttctccacatttaattgtgtgagctccagcaactaggctact 22333893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Complemental strand, 29772262 - 29772228
Alignment:
Q  176 atttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||||| ||||||||||||||||    
T  29772262 atttaattgtgtgagctctagccactaggctactt 29772228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Original strand, 38387741 - 38387775
Alignment:
Q  176 atttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||||| ||||||||||||||||    
T  38387741 atttaattgtgtgagctctagccactaggctactt 38387775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Original strand, 41566848 - 41566882
Alignment:
Q  176 atttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||||| ||||||||||||||||    
T  41566848 atttaattgtgtgagctctagccactaggctactt 41566882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 213
Target Start/End: Complemental strand, 4562732 - 4562699
Alignment:
Q  180 aattgtgtgagctccagccactaggctacttaac 213  Q
    |||||||||||||| |||||||||||||||||||    
T  4562732 aattgtgtgagctctagccactaggctacttaac 4562699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 209
Target Start/End: Original strand, 17524923 - 17524956
Alignment:
Q  176 atttaattgtgtgagctccagccactaggctact 209  Q
    |||||| |||||||||||||||||||||||||||    
T  17524923 atttaaatgtgtgagctccagccactaggctact 17524956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 18254628 - 18254709
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatattt-aattgtgtgagctccagccactaggctactt 210  Q
    ||||||||||| |||||||| ||| ||||||| |  | ||||||| |||| || ||||||||||||| |||||||| |||||    
T  18254628 atatgcaggggccggggttcgaactccagacaccccacttcttcacatttaaaatgtgtgagctccaaccactaggttactt 18254709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 209
Target Start/End: Original strand, 25562609 - 25562642
Alignment:
Q  176 atttaattgtgtgagctccagccactaggctact 209  Q
    |||||||| |||||||||||||||||||||||||    
T  25562609 atttaattatgtgagctccagccactaggctact 25562642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 210
Target Start/End: Complemental strand, 30390400 - 30390319
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcata-tttaattgtgtgagctccagccactaggctactt 210  Q
    ||||||||| | |||||||| |||||| |||| | || |||| || | ||||||||||||||||| | ||||||||||||||    
T  30390400 atatgcaggagccggggttcgaaccccggacaccctacttctccacaatttaattgtgtgagctctaaccactaggctactt 30390319  T

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Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 210
Target Start/End: Complemental strand, 33228964 - 33228883
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttca-tatttaattgtgtgagctccagccactaggctactt 210  Q
    ||||||||||| |||||||| |||||| |||| |  | |||| ||  ||| |||||||||||||| ||||||||||||||||    
T  33228964 atatgcaggggccggggttcgaaccccggacaccccacttctccacaattaaattgtgtgagctctagccactaggctactt 33228883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 209
Target Start/End: Complemental strand, 35798006 - 35797977
Alignment:
Q  180 aattgtgtgagctccagccactaggctact 209  Q
    ||||||||||||||||||||||||||||||    
T  35798006 aattgtgtgagctccagccactaggctact 35797977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 40848553 - 40848589
Alignment:
Q  13 aatatactctactttcacggtaacgtatctaattagt 49  Q
    |||||||||| |||||||||||||||||||| |||||    
T  40848553 aatatactcttctttcacggtaacgtatctatttagt 40848589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 4e-16; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 208
Target Start/End: Complemental strand, 15085715 - 15085636
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatattt-aattgtgtgagctccagccactaggctac 208  Q
    |||||||||||||||||||| |||||| |||| || | |||| ||||||| || ||||||||||||||||||||||||||    
T  15085715 atatgcaggggtcggggttcgaaccccggacacctcacttctccatatttaaaatgtgtgagctccagccactaggctac 15085636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 25189673 - 25189603
Alignment:
Q  57 attttaaaatttgacagttttggtca-tccatcatattttttaactttaaaaatgttatgtgataaatttt 126  Q
    |||||||||||  ||||||||||||  ||||||||||||||||||| ||||||||| ||||||||||||||    
T  25189673 attttaaaattcaacagttttggtccctccatcatattttttaactataaaaatgtgatgtgataaatttt 25189603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 210
Target Start/End: Complemental strand, 3748633 - 3748552
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcata-tttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||| ||||||| |||||| ||||||| | |||| || | ||||||||||||||||| ||||||||||||||||    
T  3748633 atatgcaggggttggggttcgaaccccggacatctcacttctccacaatttaattgtgtgagctctagccactaggctactt 3748552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 29098731 - 29098811
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||||||| |||||| |||| |  |||||| ||||||||||||||| || || ||||||||| ||||||    
T  29098731 atatgcaggggtcggggttcgaaccccggacaccccatttctccatatttaattgtgtaagttctagccactagactactt 29098811  T

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Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 213
Target Start/End: Original strand, 45647342 - 45647426
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaat-tgtgtgagctccagccactaggctacttaac 213  Q
    ||||||||||| |||||||| |||||| |||| || | ||||||||||||||| ||  ||||||||| |||||||||||||||||    
T  45647342 atatgcagggggcggggttcgaaccccggacacctcacttcttcatatttaatatgcttgagctccaaccactaggctacttaac 45647426  T

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Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 39450673 - 39450743
Alignment:
Q  57 attttaaaatttgacagttttggtca-tccatcatattttttaactttaaaaatgttatgtgataaatttt 126  Q
    |||||||||||||||||||||| ||  |||||||||||||| |||| ||||||||| |||||| |||||||    
T  39450673 attttaaaatttgacagttttgatccctccatcatatttttgaactataaaaatgtgatgtgaaaaatttt 39450743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 47098556 - 47098634
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    |||||||||| || ||||| ||||||||||| || | |||| || |||||||| ||||||||||||||||||| |||||    
T  47098556 tatgcaggggccgaggttcgaaccccagacacctcacttctccacatttaattatgtgagctccagccactagactact 47098634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 202
Target Start/End: Original strand, 2106063 - 2106136
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatattt-aattgtgtgagctccagccacta 202  Q
    |||||||||||||||||||| ||  || |||||| |||||||||| |||| || ||||||||||||||||||||    
T  2106063 atatgcaggggtcggggttcgaataccggacatcctatttcttcacatttaaaatgtgtgagctccagccacta 2106136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 210
Target Start/End: Complemental strand, 25884019 - 25883938
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaat-tgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||||||| |||||| |||| |  | |||| || ||||||  ||||||||||||||||||||||||||||    
T  25884019 atatgcaggggtcggggttcgaaccccggacaccccacttctccacatttaaaatgtgtgagctccagccactaggctactt 25883938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 24303430 - 24303506
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggcta 207  Q
    |||||||||| |||||||| |||||| |||| |  | |||| || |||||||||||||||||| |||||||||||||    
T  24303430 tatgcaggggccggggttcgaaccccggacaccccacttctccacatttaattgtgtgagctctagccactaggcta 24303506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 38949714 - 38949792
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    |||||||||| |||||||| ||||||  ||| |  | |||| || ||||||| ||||||||||||||||||||||||||    
T  38949714 tatgcaggggccggggttcgaaccccgaacaccccacttctccacatttaatagtgtgagctccagccactaggctact 38949792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 193
Target Start/End: Original strand, 49577409 - 49577471
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctc 193  Q
    ||||||| |||||||||| |||||||||||| |  | |||| |||||||||||||||||||||    
T  49577409 tatgcagcggtcggggtttaaaccccagacaccccacttctccatatttaattgtgtgagctc 49577471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 9685073 - 9685114
Alignment:
Q  168 ttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    |||| ||||||||| |||||||||||||||||||||||||||    
T  9685073 ttctccatatttaaatgtgtgagctccagccactaggctact 9685114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 204
Target Start/End: Complemental strand, 46845001 - 46844928
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactagg 204  Q
    |||||||||||||| |||| |||||| |||| | || |||| || |||||| ||||||||||||||| ||||||    
T  46845001 tatgcaggggtcggagttcgaaccccggacaccctacttctccacatttaaatgtgtgagctccagctactagg 46844928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 48722283 - 48722364
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttct-tcatatttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||||||| |||||| |||| | ||||||| |   ||| |||||||||||||| |||||||| |||||||    
T  48722283 atatgcaggggtcggggttcgaaccccggacaccctatttctctacaattaaattgtgtgagctctagccactaagctactt 48722364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 28951756 - 28951832
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggcta 207  Q
    ||||||||||  ||||||| ||||||||||| |  |  |||||| |||||| ||||||||||| |||||||||||||    
T  28951756 tatgcaggggctggggttcgaaccccagacaccccacatcttcacatttaaatgtgtgagctctagccactaggcta 28951832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 213
Target Start/End: Complemental strand, 30779598 - 30779514
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcata-tttaattgtgtgagctccagccactaggctacttaac 213  Q
    |||||||||||||||||||| |||||  |||| |  | |||| || | |||||||||||||| || |||||||||||||||||||    
T  30779598 atatgcaggggtcggggttcgaaccctggacaccccacttctccacaatttaattgtgtgagttctagccactaggctacttaac 30779514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 32401531 - 32401606
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggcta 207  Q
    ||||||||||||||| ||| |||||| |||| |  |  ||| || ||||||||||||||||||||||||||||||||    
T  32401531 tatgcaggggtcggg-ttcgaaccccggacaccccacatctccacatttaattgtgtgagctccagccactaggcta 32401606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 40212410 - 40212490
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||| ||||||| ||||||  | |||| | |||| ||||||||||||||||| ||| || ||||| |||||||    
T  40212410 atatgcaggggttggggttcgaaccccgtatatctcacttctccatatttaattgtgtgatctctagtcactaagctactt 40212490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 213
Target Start/End: Complemental strand, 52309141 - 52309060
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctacttaac 213  Q
    ||||||||| |||||||||| ||||||||||| |  | |||| || |||||||  |||||| || |||||||||||||||||||    
T  52309141 atatgcaggagtcggggttcgaaccccagacaccccacttctccacatttaat--tgtgagttctagccactaggctacttaac 52309060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 208
Target Start/End: Complemental strand, 27329963 - 27329884
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaat-tgtgtgagctccagccactaggctac 208  Q
    ||||||||||| |||||||| |||||| |||| |  | |||| || ||||||  ||||||||||||||||||||||||||    
T  27329963 atatgcaggggccggggttcgaaccccggacaccccacttctccacatttaaaatgtgtgagctccagccactaggctac 27329884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 202
Target Start/End: Original strand, 35849521 - 35849592
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccacta 202  Q
    |||||||||| |||||||| ||||||| ||| |  | |||| |  |||||||||||||||||||||||||||    
T  35849521 tatgcaggggccggggttcgaaccccaaacaccccacttctccccatttaattgtgtgagctccagccacta 35849592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 208
Target Start/End: Complemental strand, 41253780 - 41253701
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaat-tgtgtgagctccagccactaggctac 208  Q
    ||||||||||| |||||||| ||||||  ||| || | || | |||||||||  ||||||||||||||||||||||||||    
T  41253780 atatgcaggggccggggttcgaaccccgaacacctcacttttccatatttaaaatgtgtgagctccagccactaggctac 41253701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 208
Target Start/End: Original strand, 46767382 - 46767461
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaat-tgtgtgagctccagccactaggctac 208  Q
    |||||||||||  | |||||||||||| ||||||  | |||| || ||||||  ||||||||||||||||||||||||||    
T  46767382 atatgcaggggctgaggttcaaaccccggacatcccacttctccacatttaaaatgtgtgagctccagccactaggctac 46767461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 208
Target Start/End: Original strand, 51879134 - 51879213
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaat-tgtgtgagctccagccactaggctac 208  Q
    ||||||||||| |||||||| |||||| |||| |  | |||| || ||||||  ||||||||||||||||||||||||||    
T  51879134 atatgcaggggccggggttcgaaccccggacaccccacttctccacatttaaaatgtgtgagctccagccactaggctac 51879213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 4227774 - 4227696
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    ||||||||||||||||||| ||| || |||| |  | |||| |||| |||||||||||||||| ||||| ||| |||||    
T  4227774 tatgcaggggtcggggttcgaactccggacaccccacttctccataattaattgtgtgagctctagccattagactact 4227696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 5174040 - 5173962
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    ||||||||||  ||||||| ||||||  ||| |  | |||| || |||||||||||||||||| |||||||||||||||    
T  5174040 tatgcaggggcaggggttcgaaccccgaacaccccacttctccacatttaattgtgtgagctctagccactaggctact 5173962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Original strand, 6488210 - 6488244
Alignment:
Q  176 atttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||||| ||||||||||||||||    
T  6488210 atttaattgtgtgagctctagccactaggctactt 6488244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Original strand, 17218574 - 17218608
Alignment:
Q  176 atttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||||| ||||||||||||||||    
T  17218574 atttaattgtgtgagctctagccactaggctactt 17218608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 19222616 - 19222538
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    |||||||||| |||||||| |||||| |||| |  | |||| || ||||||||||||||||||| || | |||||||||    
T  19222616 tatgcaggggccggggttcgaaccccggacaccccacttctccacatttaattgtgtgagctccggctattaggctact 19222538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Complemental strand, 22501915 - 22501881
Alignment:
Q  176 atttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||||| ||||||||||||||||    
T  22501915 atttaattgtgtgagctctagccactaggctactt 22501881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 27837306 - 27837383
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    ||||||||||| ||||||| ||| || ||||||  ||||||| | |||||| ||||||||||| | |||||||||||||    
T  27837306 tatgcaggggttggggttcgaactccggacatcccatttctt-acatttaaatgtgtgagctctaaccactaggctact 27837383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Complemental strand, 33606924 - 33606890
Alignment:
Q  176 atttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||||| ||||||||||||||||    
T  33606924 atttaattgtgtgagctctagccactaggctactt 33606890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Original strand, 34757602 - 34757636
Alignment:
Q  176 atttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||||| ||||||||||||||||    
T  34757602 atttaattgtgtgagctctagccactaggctactt 34757636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 38018301 - 38018371
Alignment:
Q  57 attttaaaatttgacagttttggtca-tccatcatattttttaactttaaaaatgttatgtgataaatttt 126  Q
    ||||||||||| |||| | ||||||  |||||||||||||| |||| ||||||||| | ||||||||||||    
T  38018301 attttaaaattcgacaatcttggtccctccatcatatttttgaactataaaaatgtgacgtgataaatttt 38018371  T

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Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 38216358 - 38216288
Alignment:
Q  57 attttaaaatttgacagttttggtcat-ccatcatattttttaactttaaaaatgttatgtgataaatttt 126  Q
    ||||||||||| |||| |||||||||| ||||||||||||| |||  |||||| || | ||||||||||||    
T  38216358 attttaaaattcgacacttttggtcattccatcatatttttgaacaataaaaaagtgacgtgataaatttt 38216288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 41411657 - 41411579
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    ||||||||| |||||||||||||||| |||| |    |||| || ||||||||||||||| || |||||||| ||||||    
T  41411657 tatgcagggttcggggttcaaaccccggacaccccgcttctccacatttaattgtgtgagttctagccactaagctact 41411579  T

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Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Complemental strand, 44764554 - 44764520
Alignment:
Q  176 atttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||||| ||||||||||||||||    
T  44764554 atttaattgtgtgagctctagccactaggctactt 44764520  T

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Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 48515415 - 48515337
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    ||||||||||||| ||||| |||||| |||| |  | |||| || |||||| ||||||| ||| |||||||||||||||    
T  48515415 tatgcaggggtcgaggttcgaaccccggacaccacacttctccacatttaaatgtgtgaactctagccactaggctact 48515337  T

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Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 49443453 - 49443375
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    |||||||||| ||| |||| |||||| |||| |  | |||| || |||||| ||||||||||| |||||||||||||||    
T  49443453 tatgcaggggccggagttcgaaccccggacaccccacttctccacatttaaatgtgtgagctctagccactaggctact 49443375  T

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Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 49726456 - 49726525
Alignment:
Q  57 attttaaaatttgacagttttggt-catccatcatattttttaactttaaaaatgttatgtgataaatttt 126  Q
    |||||||||||||||||||||||| | ||||||||| |||| |||| ||||||| | ||| ||||||||||    
T  49726456 attttaaaatttgacagttttggtccctccatcata-ttttgaactataaaaatatgatgagataaatttt 49726525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 54408580 - 54408502
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    ||||||| ||||||||||| |||||| |||| |  |||| | || |||||||| ||||||||| | |||||||||||||    
T  54408580 tatgcagaggtcggggttcgaaccccggacaccccatttttccacatttaattatgtgagctctaaccactaggctact 54408502  T

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Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 210
Target Start/End: Complemental strand, 5641645 - 5641564
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaa-ttgtgtgagctccagccactaggctactt 210  Q
    ||||||||||| |||||||| |||| | |||| || | ||||||| | |||| |||||||||||| |||||||| |||||||    
T  5641645 atatgcaggggccggggttcgaacctcggacacctcacttcttcacaattaaattgtgtgagctctagccactaagctactt 5641564  T

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Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 213
Target Start/End: Original strand, 7920410 - 7920443
Alignment:
Q  180 aattgtgtgagctccagccactaggctacttaac 213  Q
    |||||||||||||| |||||||||||||||||||    
T  7920410 aattgtgtgagctctagccactaggctacttaac 7920443  T

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Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 163
Target Start/End: Complemental strand, 13874893 - 13874860
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatc 163  Q
    ||||||||||||||||||||||| ||||||||||    
T  13874893 atatgcaggggtcggggttcaaatcccagacatc 13874860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 39719974 - 39720055
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttca-tatttaattgtgtgagctccagccactaggctactt 210  Q
    ||||||||||| |||||||| |||||| |||| |  | |||| ||  ||| |||||||||||||| ||||||||||||||||    
T  39719974 atatgcaggggccggggttcgaaccccggacaccccacttctccacaattaaattgtgtgagctctagccactaggctactt 39720055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 208
Target Start/End: Original strand, 41710624 - 41710701
Alignment:
Q  132 atgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaat-tgtgtgagctccagccactaggctac 208  Q
    ||||||||| |||||||| || ||| |||| || | |||| || ||||||  ||||||||||||||||||||||||||    
T  41710624 atgcaggggccggggttcgaatcccggacacctcacttctccacatttaaaatgtgtgagctccagccactaggctac 41710701  T

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Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 210
Target Start/End: Complemental strand, 41936438 - 41936357
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttca-tatttaattgtgtgagctccagccactaggctactt 210  Q
    ||||||||||| |||||||| |||||| |||| |  | |||| ||  ||| |||||||||||||| ||||||||||||||||    
T  41936438 atatgcaggggccggggttcgaaccccggacaccccacttctccacaattaaattgtgtgagctctagccactaggctactt 41936357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 46754567 - 46754648
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcata-tttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||  ||| |||||| |||| ||||||||| || | || |||||||||||||| || ||||||| |||||    
T  46754567 atatgcaggggtcggatttcgaaccccggacaccttatttctccacagttaaattgtgtgagctctagtcactaggttactt 46754648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 49194676 - 49194639
Alignment:
Q  176 atttaattgtgtgagctccagccactaggctacttaac 213  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  49194676 atttaattgtgtgagctctagccactatgctacttaac 49194639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 210
Target Start/End: Complemental strand, 53432768 - 53432687
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttca-tatttaattgtgtgagctccagccactaggctactt 210  Q
    ||||||||||| |||||||| |||||| |||| |  | |||| ||  ||| |||||||||||||| ||||||||||||||||    
T  53432768 atatgcaggggccggggttcgaaccccggacaccccacttctccacaattaaattgtgtgagctctagccactaggctactt 53432687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 205
Target Start/End: Original strand, 7557151 - 7557179
Alignment:
Q  177 tttaattgtgtgagctccagccactaggc 205  Q
    |||||||||||||||||||||||||||||    
T  7557151 tttaattgtgtgagctccagccactaggc 7557179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 212
Target Start/End: Complemental strand, 54288129 - 54288085
Alignment:
Q  168 ttcttcatatttaattgtgtgagctccagccactaggctacttaa 212  Q
    |||| |||||||||||||||||||| ||||||| || ||||||||    
T  54288129 ttctccatatttaattgtgtgagcttcagccacgagactacttaa 54288085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 1247295 - 1247373
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    ||||||||||||| ||||| ||||||||||| || | |||| || |||||||||| ||||||| |||||||||||||||    
T  1247295 tatgcaggggtcgaggttcgaaccccagacacctcacttctccacatttaattgtttgagctctagccactaggctact 1247373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 210
Target Start/End: Complemental strand, 33133961 - 33133881
Alignment:
Q  131 tatgcaggggt-cggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctactt 210  Q
    ||||||||||| ||||| || |||| ||||||||| | ||||||||||||||||||||||| || ||||||||| ||||||    
T  33133961 tatgcaggggttcggggatcgaacctcagacatctcacttcttcatatttaattgtgtgagttctagccactagactactt 33133881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 132 - 210
Target Start/End: Original strand, 49907321 - 49907400
Alignment:
Q  132 atgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaat-tgtgtgagctccagccactaggctactt 210  Q
    ||||| |||||| ||||| |||||| |||||| ||||||| |||||||||  ||||||| ||||||||||||||||||||    
T  49907321 atgcaagggtcgaggttcgaaccccggacatcctatttctccatatttaaaatgtgtgaactccagccactaggctactt 49907400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 193
Target Start/End: Original strand, 621617 - 621679
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctc 193  Q
    ||||||||||||||||||| ||||||| |||||  |||||| ||||||||| |||||||||||    
T  621617 tatgcaggggtcggggttcgaaccccaaacatcacatttctccatatttaaatgtgtgagctc 621679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 15061503 - 15061572
Alignment:
Q  57 attttaaaatttgacagttttggt-catccatcatattttttaactttaaaaatgttatgtgataaatttt 126  Q
    |||||||||||||||||||||||| ||| ||||||| |||| |||||||||||||| ||| ||||||||||    
T  15061503 attttaaaatttgacagttttggtccattcatcata-ttttgaactttaaaaatgtgatgggataaatttt 15061572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 17487566 - 17487644
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    ||||||||||||||| |||||||||| |||| |  | |||| ||| ||||  |||||||||||||||||||||||||||    
T  17487566 tatgcaggggtcgggcttcaaaccccggacaccccacttctccatttttatatgtgtgagctccagccactaggctact 17487644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 42508308 - 42508378
Alignment:
Q  57 attttaaaatttgacagttttggtcat-ccatcatattttttaactttaaaaatgttatgtgataaatttt 126  Q
    ||||||||||| ||||||||||||| | || |||||||||| |||| ||||||||| ||||||||||||||    
T  42508308 attttaaaattcgacagttttggtccttccgtcatatttttgaactataaaaatgtgatgtgataaatttt 42508378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 44166511 - 44166581
Alignment:
Q  57 attttaaaatttgacagttttggt-catccatcatattttttaactttaaaaatgttatgtgataaatttt 126  Q
    |||||||||||||||||||||||| ||||||| |||||||| |||| ||||||| | || |||||||||||    
T  44166511 attttaaaatttgacagttttggtccatccattatatttttgaactataaaaatatgatctgataaatttt 44166581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 24875048 - 24875089
Alignment:
Q  168 ttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  24875048 ttctccatatttaattgtgtgagctccagccactaggctact 24875089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 39670859 - 39670784
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggct 206  Q
    ||||||||||| ||||||| ||| |||||||||  | |||| || |||||||||||||||||| | ||||||||||    
T  39670859 tatgcaggggttggggttcgaactccagacatcccacttctccacatttaattgtgtgagctctaaccactaggct 39670784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 210
Target Start/End: Original strand, 50119012 - 50119091
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||| |||| |||||| |||| |  | |||| || |||||||||||||||||| ||||||| ||||||||    
T  50119012 tatgcaggggtcggagttcgaaccccggacaccccacttctccacatttaattgtgtgagctctagccactgggctactt 50119091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 38275810 - 38275880
Alignment:
Q  57 attttaaaatttgacagttttggtca-tccatcatattttttaactttaaaaatgttatgtgataaatttt 126  Q
    ||||||||||| ||  |||||||||  |||||||||||||| |||| ||||||||| ||||||||||||||    
T  38275810 attttaaaattcgatggttttggtccctccatcatatttttgaactataaaaatgtgatgtgataaatttt 38275880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 51050229 - 51050310
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcata-tttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||  ||||||| ||||||||||||   | |||| || | ||||||||||||||||| ||||||||||||||||    
T  51050229 atatgcaggggatggggttcgaaccccagacattccacttctccacaatttaattgtgtgagctctagccactaggctactt 51050310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 209
Target Start/End: Original strand, 23233990 - 23234070
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatattta-attgtgtgagctccagccactaggctact 209  Q
    |||||||||||||||||||| ||||||||||| | || |||| || ||||| | ||||||||||| |||| |||| |||||    
T  23233990 atatgcaggggtcggggttcgaaccccagacaccctacttctccacatttataatgtgtgagctctagccgctagactact 23234070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 210
Target Start/End: Complemental strand, 16997289 - 16997210
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||| || ||||| |||||| |||| || | |||| || ||| ||||||||||||| ||||||||| |||||||    
T  16997289 tatgcaggggccgaggttcgaaccccggacacctcacttctccacattcaattgtgtgagcttcagccactacgctactt 16997210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 23991294 - 23991219
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggct 206  Q
    |||||||||| |||||||| |||||  |||| |  | |||| || |||||||||||||||||| ||||||||||||    
T  23991294 tatgcaggggccggggttcgaaccctggacaccccacttctccacatttaattgtgtgagctctagccactaggct 23991219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 207
Target Start/End: Original strand, 37280786 - 37280817
Alignment:
Q  176 atttaattgtgtgagctccagccactaggcta 207  Q
    ||||||||||||||||||||||||||||||||    
T  37280786 atttaattgtgtgagctccagccactaggcta 37280817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Complemental strand, 7166211 - 7166177
Alignment:
Q  176 atttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||||| ||||||||||||||||    
T  7166211 atttaattgtgtgagctctagccactaggctactt 7166177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Original strand, 11215087 - 11215121
Alignment:
Q  176 atttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||||| ||||||||||||||||    
T  11215087 atttaattgtgtgagctctagccactaggctactt 11215121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Complemental strand, 18467182 - 18467148
Alignment:
Q  176 atttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||||| ||||||||||||||||    
T  18467182 atttaattgtgtgagctctagccactaggctactt 18467148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Original strand, 19011441 - 19011475
Alignment:
Q  176 atttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||||| ||||||||||||||||    
T  19011441 atttaattgtgtgagctctagccactaggctactt 19011475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Original strand, 22563472 - 22563506
Alignment:
Q  176 atttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||||| ||||||||||||||||    
T  22563472 atttaattgtgtgagctctagccactaggctactt 22563506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 33843225 - 33843147
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    ||||||| ||||||||||| ||||||  ||| |  | |||||||  ||||||||||||||||||||||| ||| |||||    
T  33843225 tatgcagaggtcggggttcgaaccccgaacaccccacttcttcacgtttaattgtgtgagctccagccaatagactact 33843147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 33950754 - 33950832
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    ||||||| ||||||||||| ||||||  ||| |  | |||||||  ||||||||||||||||||||||| ||| |||||    
T  33950754 tatgcagaggtcggggttcgaaccccgaacaccccacttcttcacgtttaattgtgtgagctccagccaatagactact 33950832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 193
Target Start/End: Complemental strand, 43508709 - 43508667
Alignment:
Q  151 aaccccagacatcttatttcttcatatttaattgtgtgagctc 193  Q
    |||| ||||||||| |||||| |||||||||||||||||||||    
T  43508709 aacctcagacatctcatttctccatatttaattgtgtgagctc 43508667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Complemental strand, 45333696 - 45333662
Alignment:
Q  176 atttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||||| ||||||||||||||||    
T  45333696 atttaattgtgtgagctctagccactaggctactt 45333662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Complemental strand, 45517252 - 45517218
Alignment:
Q  176 atttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||||| ||||||||||||||||    
T  45517252 atttaattgtgtgagctctagccactaggctactt 45517218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Complemental strand, 50899487 - 50899453
Alignment:
Q  176 atttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||||| ||||||||||||||||    
T  50899487 atttaattgtgtgagctctagccactaggctactt 50899453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 6702615 - 6702696
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttca-tatttaattgtgtgagctccagccactaggctactt 210  Q
    ||||||||| |||||||||| |||||||||||    | |||||||  ||| |||||||||||||| ||||| ||||||||||    
T  6702615 atatgcaggagtcggggttcgaaccccagacactccacttcttcacaattaaattgtgtgagctctagccattaggctactt 6702696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 209
Target Start/End: Original strand, 7491846 - 7491879
Alignment:
Q  176 atttaattgtgtgagctccagccactaggctact 209  Q
    |||||||||||||||||| |||||||||||||||    
T  7491846 atttaattgtgtgagctctagccactaggctact 7491879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 209
Target Start/End: Original strand, 11860087 - 11860160
Alignment:
Q  136 aggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    |||||||||||||| |||||| |||| |  | |||| || ||||||||||||||| ||| |||||||| |||||    
T  11860087 aggggtcggggttcgaaccccggacaccccacttctccacatttaattgtgtgaggtccggccactagactact 11860160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 21265695 - 21265776
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttca-tatttaattgtgtgagctccagccactaggctactt 210  Q
    ||||||||||| |||||||| |||||| |||| |  | |||| ||  ||| |||||||||||||| ||||||||||||||||    
T  21265695 atatgcaggggccggggttcgaaccccggacaccccacttctccacaattaaattgtgtgagctctagccactaggctactt 21265776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 213
Target Start/End: Complemental strand, 32970781 - 32970748
Alignment:
Q  180 aattgtgtgagctccagccactaggctacttaac 213  Q
    |||||||||||||| |||||||||||||||||||    
T  32970781 aattgtgtgagctctagccactaggctacttaac 32970748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 208
Target Start/End: Complemental strand, 36666606 - 36666529
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctac 208  Q
    |||||||||| |||||||| |||||| |||| |  | |||| || | |||||||||||||||| ||||| ||||||||    
T  36666606 tatgcaggggccggggttcgaaccccggacaccccacttctccacaattaattgtgtgagctctagccattaggctac 36666529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 26824231 - 26824307
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggcta 207  Q
    |||||||||| || ||||| ||| || | || | || |||| || |||||||||||||||||| |||||||||||||    
T  26824231 tatgcaggggccgaggttcgaactccgggcaccatacttctccacatttaattgtgtgagctctagccactaggcta 26824307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 31124668 - 31124592
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggcta 207  Q
    |||||||||| |||||||| ||| || || | |  | |||| || |||||||||||||||||| |||||||||||||    
T  31124668 tatgcaggggccggggttcgaactccggataccccacttctccacatttaattgtgtgagctctagccactaggcta 31124592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 210
Target Start/End: Original strand, 40520927 - 40520959
Alignment:
Q  178 ttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||| ||||||||||||||||    
T  40520927 ttaattgtgtgagctctagccactaggctactt 40520959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 41620464 - 41620496
Alignment:
Q  176 atttaattgtgtgagctccagccactaggctac 208  Q
    |||||||||||||||||| ||||||||||||||    
T  41620464 atttaattgtgtgagctctagccactaggctac 41620496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 21066925 - 21067005
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctactt 210  Q
    ||||| ||||| |||||||| |||||| ||||||| | |||| || ||||||||||| |||||| ||||||||||||||||    
T  21066925 atatgtaggggccggggttcgaaccccggacatctcacttctccacatttaattgtgcgagctctagccactaggctactt 21067005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 42457389 - 42457459
Alignment:
Q  57 attttaaaatttgacagttttggtc-atccatcatattttttaactttaaaaatgttatgtgataaatttt 126  Q
    |||||||||||  ||||||||| || |||||||||||||||||||| ||||||| | ||||||||||||||    
T  42457389 attttaaaattcaacagttttgatccatccatcatattttttaactataaaaatatgatgtgataaatttt 42457459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 213
Target Start/End: Complemental strand, 13730128 - 13730045
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctacttaac 213  Q
    ||||||||||| |||||||  |||||| ||||    |||||| ||||||||||||||||||||| || |||||||||| |||||    
T  13730128 atatgcaggggccggggtttgaaccccggacactccatttctccatatttaattgtgtgagctctagtcactaggctatttaac 13730045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 193
Target Start/End: Original strand, 23817227 - 23817290
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctc 193  Q
    ||||| |||||||||||||||||||||| ||| | ||||||| ||  |||||||||||||||||    
T  23817227 atatgtaggggtcggggttcaaaccccaaacaccctatttctccacgtttaattgtgtgagctc 23817290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 27788309 - 27788387
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    |||||||||| |||||||| ||||||||||| |  | |||| || |||||| ||| |||||||||||||| ||||||||    
T  27788309 tatgcaggggccggggttcgaaccccagacaccccacttctccacatttaaatgtatgagctccagccaccaggctact 27788387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 27791465 - 27791543
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    |||||||||| |||||||| ||||||||||| |  | |||| || |||||| ||| |||||||||||||| ||||||||    
T  27791465 tatgcaggggccggggttcgaaccccagacaccccacttctccacatttaaatgtatgagctccagccaccaggctact 27791543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 15238928 - 15239009
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcata-tttaattgtgtgagctccagccactaggctactt 210  Q
    ||||||||||| |||||||| |||||| ||||    | |||| |||| ||||||||||||||||| ||||||||||||||||    
T  15238928 atatgcaggggccggggttcgaaccccggacactccacttctccataatttaattgtgtgagctctagccactaggctactt 15239009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 20896543 - 20896474
Alignment:
Q  57 attttaaaatttgacagttttggtcatccatcatattttttaactttaaaaatgttatgtgataaatttt 126  Q
    |||||||||||  | ||||||| || |||||||||||||| |||| ||||||||| |||||| |||||||    
T  20896543 attttaaaattcaaaagttttgttcctccatcatatttttgaactataaaaatgtgatgtgagaaatttt 20896474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 125
Target Start/End: Complemental strand, 44858092 - 44858023
Alignment:
Q  57 attttaaaatttgacagttttggt-catccatcatattttttaactttaaaaatgttatgtgataaattt 125  Q
    |||||||||||||||||||||||| | || |||| |||||| |||| ||||||||  |||||||||||||    
T  44858092 attttaaaatttgacagttttggtccctctatcaaatttttgaactataaaaatgcaatgtgataaattt 44858023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 213
Target Start/End: Original strand, 3392506 - 3392590
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcat-atttaattgtgtgagctccagccactaggctacttaac 213  Q
    ||||| |||||||||||||| ||||||||||| |  | |||||| | ||| |||||||||||||| |  ||||||||||||||||    
T  3392506 atatgtaggggtcggggttcgaaccccagacaccccacttcttcgtaattaaattgtgtgagctctaatcactaggctacttaac 3392590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Complemental strand, 9697875 - 9697841
Alignment:
Q  176 atttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||||| ||||||||||||||||    
T  9697875 atttaattgtgtgagctctagccactaggctactt 9697841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 209
Target Start/End: Original strand, 12935792 - 12935858
Alignment:
Q  143 ggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    ||||||| ||||||||||  |  | |||| || |||||||||||||||||| |||||||||||||||    
T  12935792 ggggttcgaaccccagacgccccacttctccacatttaattgtgtgagctctagccactaggctact 12935858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Original strand, 13720856 - 13720890
Alignment:
Q  176 atttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||||| ||||||||||||||||    
T  13720856 atttaattgtgtgagctctagccactaggctactt 13720890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 209
Target Start/End: Complemental strand, 15021237 - 15021163
Alignment:
Q  135 caggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    |||| |||||||||| |||||| |||| || |||| | || |||||| ||||||||||| ||||||||| |||||    
T  15021237 caggagtcggggttcgaaccccggacacctcatttttccacatttaaatgtgtgagctctagccactagactact 15021163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Complemental strand, 19331484 - 19331450
Alignment:
Q  176 atttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||||| ||||||||||||||||    
T  19331484 atttaattgtgtgagctctagccactaggctactt 19331450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Original strand, 27424924 - 27424958
Alignment:
Q  176 atttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||||| ||||||||||||||||    
T  27424924 atttaattgtgtgagctctagccactaggctactt 27424958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 207
Target Start/End: Original strand, 32047128 - 32047206
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaa-ttgtgtgagctccagccactaggcta 207  Q
    ||||||||||| |||||||| |||||| |||| || | |||| || | |||| |||||||||||| |||||||||||||    
T  32047128 atatgcaggggccggggttcgaaccccggacacctcacttctccacaattaaattgtgtgagctctagccactaggcta 32047206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 210
Target Start/End: Complemental strand, 35835679 - 35835649
Alignment:
Q  180 aattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||||||||||||||||||    
T  35835679 aattgtgtgagctccagccactaggctactt 35835649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Original strand, 48119556 - 48119590
Alignment:
Q  176 atttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||||| ||||||||||||||||    
T  48119556 atttaattgtgtgagctctagccactaggctactt 48119590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Original strand, 48719885 - 48719919
Alignment:
Q  176 atttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||||| ||||||||||||||||    
T  48719885 atttaattgtgtgagctctagccactaggctactt 48719919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 16200598 - 16200679
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttca-tatttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||||||| ||||||||||| |  |||||| ||  ||| |||||||||| ||| ||| ||||| ||||||    
T  16200598 atatgcaggggtcggggttcgaaccccagacaccccatttctccacaattaaattgtgtgatctctagctactagactactt 16200679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 24188509 - 24188590
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttca-tatttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||||||| ||||||||||| |  | |||| ||  ||| ||||||||||||   ||||||||||||||||    
T  24188509 atatgcaggggtcggggttcgaaccccagacaccccacttctccacaattaaattgtgtgagccatagccactaggctactt 24188590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 212
Target Start/End: Original strand, 25155581 - 25155662
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctacttaa 212  Q
    ||||||||| ||||||||| |||||  |||| |  | |||| || |||||||||||||||||  ||||||||| ||||||||    
T  25155581 tatgcagggttcggggttcgaaccctggacaccccacttctccacatttaattgtgtgagctgtagccactagcctacttaa 25155662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 210
Target Start/End: Complemental strand, 31769543 - 31769462
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttca-tatttaattgtgtgagctccagccactaggctactt 210  Q
    ||||||||| |||||||||| |||||||||||   || |||| ||  ||| |||||||||||||  ||||||||||||||||    
T  31769543 atatgcaggagtcggggttcgaaccccagacactctacttctccacaattaaattgtgtgagctttagccactaggctactt 31769462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 47542970 - 47542929
Alignment:
Q  168 ttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    |||| ||||||||||| ||||||||| |||||||||||||||    
T  47542970 ttctccatatttaattttgtgagctctagccactaggctact 47542929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 212
Target Start/End: Original strand, 21576936 - 21576980
Alignment:
Q  168 ttcttcatatttaattgtgtgagctccagccactaggctacttaa 212  Q
    |||| |||||||||||||||||| || ||||||||| ||||||||    
T  21576936 ttctccatatttaattgtgtgagttcaagccactagactacttaa 21576980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 210
Target Start/End: Complemental strand, 36114372 - 36114292
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||| ||||||||||| ||||||| | |||| | |||| || |||||| ||||||||||| | ||| ||| ||||||    
T  36114372 atatgcagcggtcggggttcgaaccccaaatatctcacttctccacatttaaatgtgtgagctctaaccattagactactt 36114292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 203
Target Start/End: Complemental strand, 45284849 - 45284777
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactag 203  Q
    ||||||||||||||||||| |||||| |||| |  | ||||  | |||||||||||||||||| | |||||||    
T  45284849 tatgcaggggtcggggttcgaaccccggacaccccacttctcaacatttaattgtgtgagctctaaccactag 45284777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 126
Target Start/End: Original strand, 46303617 - 46303685
Alignment:
Q  58 ttttaaaatttgacagttttggtcatccatcatattttttaactttaaaaatgttatgtgataaatttt 126  Q
    ||||| |||| |||||||| |  | |||||||||||||| ||||  |||||||| ||||||||||||||    
T  46303617 ttttataattcgacagtttggtccttccatcatatttttgaactacaaaaatgtgatgtgataaatttt 46303685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 210
Target Start/End: Complemental strand, 47194455 - 47194375
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctactt 210  Q
    ||||| |||| |||||||||||| |||| ||| |  | |||| || | ||||||||||||| || ||||||||||||||||    
T  47194455 atatgtagggatcggggttcaaatcccaaacaccccacttctccacaattaattgtgtgagttctagccactaggctactt 47194375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 213
Target Start/End: Complemental strand, 48674593 - 48674509
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcat-atttaattgtgtgagctccagccactaggctacttaac 213  Q
    |||||||||||| |||||||||||||| ||||    | |||| ||| ||| |||||||||||||| || |||||| |||||||||    
T  48674593 atatgcaggggttggggttcaaaccccggacactccacttctccataattaaattgtgtgagctctagtcactagactacttaac 48674509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 21409 - 21339
Alignment:
Q  57 attttaaaatttgacagttttggtca-tccatcatattttttaactttaaaaatgttatgtgataaatttt 126  Q
    ||||||||||| |||||||||||||  |||||||||||||| |||| ||||||||| ||||| ||||||||    
T  21409 attttaaaattcgacagttttggtccctccatcatatttttgaactataaaaatgtgatgtggtaaatttt 21339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 205
Target Start/End: Complemental strand, 16207 - 16133
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggc 205  Q
    |||||||||||  |||||| |||||||||||| | | ||||||| |||||||||||||||||  |||||||||||    
T  16207 tatgcaggggttagggttcgaaccccagacatttcacttcttcacatttaattgtgtgagctttagccactaggc 16133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 3207885 - 3207815
Alignment:
Q  57 attttaaaatttgacagttttggtca-tccatcatattttttaactttaaaaatgttatgtgataaatttt 126  Q
    ||||||||||| || ||||||||||| ||||||||||| || |||| ||||||||| ||||||||||||||    
T  3207885 attttaaaattcgatagttttggtcactccatcatattcttaaactataaaaatgtgatgtgataaatttt 3207815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 38255428 - 38255358
Alignment:
Q  57 attttaaaatttgacagttttggtca-tccatcatattttttaactttaaaaatgttatgtgataaatttt 126  Q
    ||||||||||| |||||||||||||  | ||||||||||||||||  ||||||||| ||||||||||||||    
T  38255428 attttaaaattcgacagttttggtccctgcatcatattttttaaccataaaaatgtaatgtgataaatttt 38255358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 38283164 - 38283242
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    |||||||||| |||||||| ||||||||||| |  | |||| || |||||||||||||| ||| |||||||||||||||    
T  38283164 tatgcaggggccggggttcgaaccccagacaccccacttctccacatttaattgtgtgaactctagccactaggctact 38283242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 126
Target Start/End: Complemental strand, 24587360 - 24587293
Alignment:
Q  60 ttaaaatttgacagttttggtca-tccatcatattttttaactttaaaaatgttatgtgataaatttt 126  Q
    |||||||| ||| |||||||||  |||||||||||||| |||| ||||||||| ||||||||||||||    
T  24587360 ttaaaattcgacggttttggtctctccatcatatttttgaactataaaaatgtgatgtgataaatttt 24587293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 208
Target Start/End: Original strand, 37708730 - 37708809
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaat-tgtgtgagctccagccactaggctac 208  Q
    ||||||||||| |||||||| |||||| ||||||  | |||| || ||||||  ||||||||||||||||||||||||||    
T  37708730 atatgcaggggccggggttcgaaccccggacatcccacttctccacatttaaaatgtgtgagctccagccactaggctac 37708809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 126
Target Start/End: Complemental strand, 39186429 - 39186354
Alignment:
Q  52 tccccattttaaaatttgacagttttggtca-tccatcatattttttaactttaaaaatgttatgtgataaatttt 126  Q
    |||| ||||| ||||| |||||||||||||  |||||| |||||||||| | ||||||||| ||||||||||||||    
T  39186429 tccctatttttaaattcgacagttttggtccctccatcgtattttttaagtataaaaatgtgatgtgataaatttt 39186354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 207
Target Start/End: Original strand, 8183359 - 8183437
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatattt-aattgtgtgagctccagccactaggcta 207  Q
    ||||||||||| |||||||| ||||||||||| |  | |||| ||||||| || ||||||||||||||||| |||||||    
T  8183359 atatgcaggggccggggttcgaaccccagacaacccacttctccatatttaaaatgtgtgagctccagccattaggcta 8183437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 16449164 - 16449245
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcata-tttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||| ||||||| |||||||||||    | |||| || | ||||||||||||||||| ||||||||||||||||    
T  16449164 atatgcaggggttggggttcgaaccccagacactccacttctccacaatttaattgtgtgagctctagccactaggctactt 16449245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 210
Target Start/End: Complemental strand, 23178922 - 23178841
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcata-tttaattgtgtgagctccagccactaggctactt 210  Q
    ||||||||||| |||||||| |||||| ||||    | ||||||| | ||||||||||||||||| ||||||||||||||||    
T  23178922 atatgcaggggccggggttcgaaccccggacactccacttcttcacaatttaattgtgtgagctctagccactaggctactt 23178841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 5683793 - 5683873
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||| ||||||| ||||||||||| | || |||| || |||||  ||||||||||| || ||||| |||||||    
T  5683793 atatgcaggggttggggttcgaaccccagacaccctacttctccacatttatatgtgtgagctctagtcactaagctactt 5683873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 210
Target Start/End: Complemental strand, 22274642 - 22274562
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctactt 210  Q
    ||||||||| | |||||||| |||||| |||| |  | |||| || | |||||||||||||||| ||||||||||||||||    
T  22274642 atatgcaggagccggggttcgaaccccggacaccccacttctccacaattaattgtgtgagctctagccactaggctactt 22274562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 210
Target Start/End: Complemental strand, 39674089 - 39674009
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||| ||||||| |||||  |||| |  | ||||||| |||||||||| ||||||| ||||||||| ||||||    
T  39674089 atatgcaggggttggggttcgaaccctggacaccccacttcttcacatttaattgtatgagctctagccactagactactt 39674009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 208
Target Start/End: Complemental strand, 36035210 - 36035131
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaat-tgtgtgagctccagccactaggctac 208  Q
    |||||||||||||||||||| |||| | |||| |  | |||| || ||||||  ||||||||||||||||||||||||||    
T  36035210 atatgcaggggtcggggttcgaacctcggacaccccacttctccacatttaaaatgtgtgagctccagccactaggctac 36035131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 210
Target Start/End: Original strand, 5038648 - 5038678
Alignment:
Q  180 aattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||||||||||||||||||    
T  5038648 aattgtgtgagctccagccactaggctactt 5038678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Original strand, 8265354 - 8265388
Alignment:
Q  176 atttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||||| ||||||||||||||||    
T  8265354 atttaattgtgtgagctctagccactaggctactt 8265388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 210
Target Start/End: Complemental strand, 11236953 - 11236875
Alignment:
Q  132 atgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctactt 210  Q
    ||||||||| |||||||| | ||||| ||| || | ||||| | |||||| ||||||||||| | ||||||||||||||    
T  11236953 atgcaggggccggggttcgagccccaaacacctcacttcttaaaatttaaatgtgtgagctctatccactaggctactt 11236875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Complemental strand, 16432112 - 16432078
Alignment:
Q  176 atttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||||| ||||||||||||||||    
T  16432112 atttaattgtgtgagctctagccactaggctactt 16432078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 20771478 - 20771548
Alignment:
Q  57 attttaaaatttgacagttttggtca-tccatcatattttttaactttaaaaatgttatgtgataaatttt 126  Q
    ||||||||| |||||| |||||| |  |||||| ||||||| |||| ||||||||| ||||||||||||||    
T  20771478 attttaaaagttgacaattttggcccctccatcgtatttttgaactataaaaatgtgatgtgataaatttt 20771548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 20781272 - 20781342
Alignment:
Q  57 attttaaaatttgacagttttggtca-tccatcatattttttaactttaaaaatgttatgtgataaatttt 126  Q
    ||||||||| |||||| |||||| |  |||||| ||||||| |||| ||||||||| ||||||||||||||    
T  20781272 attttaaaagttgacaattttggcccctccatcgtatttttgaactataaaaatgtgatgtgataaatttt 20781342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 25824932 - 25824854
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    |||||| |||||||||||| ||||||||||| |  | ||||  | || ||||||||||||||| |||||||| ||||||    
T  25824932 tatgcaagggtcggggttcgaaccccagacaccccacttctcaacatataattgtgtgagctctagccactaagctact 25824854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 26395403 - 26395485
Alignment:
Q  130 atatgcaggggtc-ggggttcaaaccccagacatcttatttcttcatatttaa-ttgtgtgagctccagccactaggctactt 210  Q
    ||||||||||| | ||||||| ||||||||||| |  |||||| || | |||| ||||||||||| |||||||||||||||||    
T  26395403 atatgcagggggctggggttcgaaccccagacaccccatttctccacaattaaattgtgtgagctacagccactaggctactt 26395485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 207
Target Start/End: Original strand, 33810679 - 33810757
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatattt-aattgtgtgagctccagccactaggcta 207  Q
    ||||||||||| ||||||||||||||| |||| |  | |||| || |||| || |||||||||||||||||||| ||||    
T  33810679 atatgcaggggccggggttcaaaccccggacaccccacttctccacatttaaaatgtgtgagctccagccactaagcta 33810757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Original strand, 39169571 - 39169605
Alignment:
Q  176 atttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||||| ||||||||||||||||    
T  39169571 atttaattgtgtgagctctagccactaggctactt 39169605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 43846975 - 43847053
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    |||||||||||||  |||| |||||  |||| |  | |||| || |||||||||||||||||| |||||||||||||||    
T  43846975 tatgcaggggtcgatgttcgaaccctggacaccccacttctccacatttaattgtgtgagctctagccactaggctact 43847053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 163
Target Start/End: Original strand, 4293919 - 4293952
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatc 163  Q
    |||||||||||||||||||| |||||||||||||    
T  4293919 atatgcaggggtcggggttcgaaccccagacatc 4293952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 210
Target Start/End: Complemental strand, 5328598 - 5328517
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaat-tgtgtgagctccagccactaggctactt 210  Q
    ||||||||||| |||||||| |||||| |||| || | |||| || | ||||  ||||||||||| ||||||||||||||||    
T  5328598 atatgcaggggccggggttcgaaccccggacacctcacttctccacaattaaaatgtgtgagctctagccactaggctactt 5328517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 203
Target Start/End: Original strand, 10083202 - 10083275
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactag 203  Q
    |||||||||||||| ||||| |||||| |||| |  | |||| ||||||||  ||||||||||| |||||||||    
T  10083202 atatgcaggggtcgaggttcgaaccccggacaccccacttctccatatttatatgtgtgagctctagccactag 10083275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 200
Target Start/End: Original strand, 12770408 - 12770477
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccac 200  Q
    |||||||||| |||||||| |||||| |||| |  | |||| || |||||||||||||||||| ||||||    
T  12770408 tatgcaggggccggggttcgaaccccggacaccccacttctccacatttaattgtgtgagctctagccac 12770477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 23858283 - 23858320
Alignment:
Q  176 atttaattgtgtgagctccagccactaggctacttaac 213  Q
    ||||||||||||||| || |||||||||||||||||||    
T  23858283 atttaattgtgtgagttctagccactaggctacttaac 23858320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 34894408 - 34894489
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcata-tttaattgtgtgagctccagccactaggctactt 210  Q
    ||||||||||| |||||||| |||||| |||| |  | |||| || | || |||||||||||||| ||||||||||||||||    
T  34894408 atatgcaggggccggggttcgaaccccggacaccccacttctccacagttaaattgtgtgagctctagccactaggctactt 34894489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 213
Target Start/End: Original strand, 37291012 - 37291045
Alignment:
Q  180 aattgtgtgagctccagccactaggctacttaac 213  Q
    |||||||||||||| |||||||||||||||||||    
T  37291012 aattgtgtgagctctagccactaggctacttaac 37291045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 201
Target Start/End: Original strand, 44156788 - 44156821
Alignment:
Q  168 ttcttcatatttaattgtgtgagctccagccact 201  Q
    ||||||| ||||||||||||||||||||||||||    
T  44156788 ttcttcacatttaattgtgtgagctccagccact 44156821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 162
Target Start/End: Original strand, 18577149 - 18577181
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacat 162  Q
    |||||||||||||||||||||||||||| ||||    
T  18577149 atatgcaggggtcggggttcaaaccccaaacat 18577181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 210
Target Start/End: Complemental strand, 41865113 - 41865033
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctactt 210  Q
    ||||||||||||| |||||| |||||||||||    |||| | || ||||||||||||||| |  ||||||||| ||||||    
T  41865113 atatgcaggggtcagggttcgaaccccagacactccatttttccacatttaattgtgtgagttatagccactagactactt 41865033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000006; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 203
Target Start/End: Original strand, 8571833 - 8571905
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactag 203  Q
    ||||||||||||||||||| ||||||  ||| | || |||| || |||||||||||||||||| |||||||||    
T  8571833 tatgcaggggtcggggttcgaaccccgaacaccctacttctccacatttaattgtgtgagctctagccactag 8571905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 208
Target Start/End: Original strand, 3740993 - 3741072
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaat-tgtgtgagctccagccactaggctac 208  Q
    |||||||||||||||||||| |||||| |||| |  | |||| || ||||||  ||||||||||||||||||||||||||    
T  3740993 atatgcaggggtcggggttcgaaccccggacaccccacttctccacatttaaaatgtgtgagctccagccactaggctac 3741072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 201
Target Start/End: Original strand, 7171768 - 7171838
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccact 201  Q
    |||||||||| |||||||| ||||||||||| |  | |||| || | ||||||||||||||||||||||||    
T  7171768 tatgcaggggccggggttcgaaccccagacaccccacttctccacaattaattgtgtgagctccagccact 7171838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 5908311 - 5908270
Alignment:
Q  168 ttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    |||| ||||||||||||||||||||| |||||||||||||||    
T  5908311 ttctccatatttaattgtgtgagctctagccactaggctact 5908270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 210
Target Start/End: Complemental strand, 11188713 - 11188632
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcata-tttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||  |||||||||||||||||||    | |||| || | ||||||||||||||||| ||||||||||||||||    
T  11188713 atatgcaggggctggggttcaaaccccagacactcaacttctccacaatttaattgtgtgagctctagccactaggctactt 11188632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 210
Target Start/End: Complemental strand, 17545203 - 17545122
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcata-tttaattgtgtgagctccagccactaggctactt 210  Q
    ||||||||||| |||||||| |||||| ||||    | |||| |||| ||||||||||||||||| ||||||||||||||||    
T  17545203 atatgcaggggccggggttcgaaccccggacactccacttctccataatttaattgtgtgagctctagccactaggctactt 17545122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 210
Target Start/End: Complemental strand, 22732396 - 22732316
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcat-atttaattgtgtgagctccagccactaggctactt 210  Q
    ||||||| ||||||||||| ||||||  ||||   | |||| ||| |||||||||||||||||||||||||||| ||||||    
T  22732396 tatgcagcggtcggggttcgaaccccgaacattacacttctccataatttaattgtgtgagctccagccactagactactt 22732316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 210
Target Start/End: Original strand, 4068022 - 4068101
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||| || ||||| |||||| |||| |  | |||| || |||||||||||||||||||| |||||| |||||||    
T  4068022 tatgcagggggcgaggttcgaaccccggacaccccacttctccacatttaattgtgtgagctccaaccactacgctactt 4068101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 11535630 - 11535705
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggct 206  Q
    |||| |||||||| ||||| |||||  |||| || | ||||||| |||||||||||||||||| ||||| ||||||    
T  11535630 tatgtaggggtcgtggttcgaaccctggacacctcacttcttcacatttaattgtgtgagctctagccattaggct 11535705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 201
Target Start/End: Complemental strand, 28758448 - 28758377
Alignment:
Q  131 tatgcaggggtcggggttcaaacc-ccagacatcttatttcttcatatttaattgtgtgagctccagccact 201  Q
    |||||||| ||||||||||||||| || |||| || | |||| || |||||||||| |||||||||||||||    
T  28758448 tatgcaggagtcggggttcaaacctccggacacctcacttctccacatttaattgtatgagctccagccact 28758377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 13361260 - 13361190
Alignment:
Q  57 attttaaaatttgacagttttggt-catccatcatattttttaactttaaaaatgttatgtgataaatttt 126  Q
    ||||||||||||||||||||| || | |||||||||| ||| || | ||||||||  ||||||||||||||    
T  13361260 attttaaaatttgacagttttagtccttccatcatatatttgaattataaaaatgggatgtgataaatttt 13361190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Complemental strand, 22569229 - 22569195
Alignment:
Q  176 atttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||||| ||||||||||||||||    
T  22569229 atttaattgtgtgagctctagccactaggctactt 22569195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Original strand, 28308320 - 28308354
Alignment:
Q  176 atttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||||| ||||||||||||||||    
T  28308320 atttaattgtgtgagctctagccactaggctactt 28308354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 206
Target Start/End: Complemental strand, 29646098 - 29646068
Alignment:
Q  176 atttaattgtgtgagctccagccactaggct 206  Q
    |||||||||||||||||||||||||||||||    
T  29646098 atttaattgtgtgagctccagccactaggct 29646068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Original strand, 36735958 - 36735992
Alignment:
Q  176 atttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||||| ||||||||||||||||    
T  36735958 atttaattgtgtgagctctagccactaggctactt 36735992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 6558840 - 6558921
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaa-ttgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||||||||| ||| || |||| | || |||| || | |||| |||||||||||| || |||||||||||||    
T  6558840 atatgcaggggtcggggttcgaactccggacaccctacttctccacaattaaattgtgtgagctctagtcactaggctactt 6558921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 213
Target Start/End: Complemental strand, 10804209 - 10804176
Alignment:
Q  180 aattgtgtgagctccagccactaggctacttaac 213  Q
    |||||||||||||| |||||||||||||||||||    
T  10804209 aattgtgtgagctctagccactaggctacttaac 10804176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 163
Target Start/End: Complemental strand, 11246553 - 11246520
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatc 163  Q
    ||||||||||||||||| ||||||||||||||||    
T  11246553 atatgcaggggtcggggctcaaaccccagacatc 11246520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 11313555 - 11313596
Alignment:
Q  168 ttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    |||| ||||||||||||||||||||||| |||||| ||||||    
T  11313555 ttctgcatatttaattgtgtgagctccaaccactaagctact 11313596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 19655965 - 19655924
Alignment:
Q  168 ttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    |||| ||||||||||||||| ||||| |||||||||||||||    
T  19655965 ttctccatatttaattgtgtaagctcgagccactaggctact 19655924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 209
Target Start/End: Original strand, 24477910 - 24477943
Alignment:
Q  176 atttaattgtgtgagctccagccactaggctact 209  Q
    |||||||||||||||||||||||||||| |||||    
T  24477910 atttaattgtgtgagctccagccactagtctact 24477943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 210
Target Start/End: Original strand, 9125713 - 9125781
Alignment:
Q  142 cggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||| |||||| |||| || | |||| || |||||  ||||||||||| ||||||||||||||||    
T  9125713 cggggttcgaaccccggacacctcacttctccacatttatatgtgtgagctctagccactaggctactt 9125781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 11498670 - 11498738
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagcca 199  Q
    |||| |||||||| |||||||||||  |||| || | || |||| |||||||||||||||||| |||||    
T  11498670 tatgtaggggtcgtggttcaaaccctggacacctcactttttcacatttaattgtgtgagctctagcca 11498738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 210
Target Start/End: Original strand, 34208425 - 34208493
Alignment:
Q  142 cggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctactt 210  Q
    |||||||| ||||||||||| |  | |||| || | ||||||||||||| || ||||||||||||||||    
T  34208425 cggggttcgaaccccagacaccccacttctccacaattaattgtgtgagttctagccactaggctactt 34208493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 210
Target Start/End: Complemental strand, 8939 - 8864
Alignment:
Q  136 aggggtcggggttcaaaccccagacatcttatttcttcatatttaa-ttgtgtgagctccagccactaggctactt 210  Q
    |||||||||||||| |||| |||||| || ||||||||| | |||| ||||||||| || ||||||||||||||||    
T  8939 aggggtcggggttcgaacctcagacacctcatttcttcacaattaaattgtgtgagttctagccactaggctactt 8864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 24420 - 24498
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    |||||||||| |||||||| |||||| ||||    | ||||||| |||||| ||||||||||| |||||||||||||||    
T  24420 tatgcaggggccggggttcgaaccccggacactccacttcttcacatttaaatgtgtgagctctagccactaggctact 24498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 28851 - 28773
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatcttatttcttcatatttaattgtgtgagctccagccactaggctact 209  Q
    |||||||||| |||||||| |||||| |||| |  | |||| || |||||||||||||||||||||||| |||| ||||    
T  28851 tatgcaggggccggggttcgaaccccggacaccccacttctccacatttaattgtgtgagctccagccattaggttact 28773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 210
Target Start/End: Complemental strand, 4045 - 3964
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttcata-tttaattgtgtgagctccagccactaggctactt 210  Q
    ||||||||| |||||||||| |||||||||||    | |||| || | ||||||||||||||||| ||||||||||||||||    
T  4045 atatgcaggagtcggggttcgaaccccagacactccacttctccacaatttaattgtgtgagctctagccactaggctactt 3964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 17580 - 17650
Alignment:
Q  57 attttaaaatttgacagttttggt-catccatcatattttttaactttaaaaatgttatgtgataaatttt 126  Q
    ||||||||||| || ||||||| | | ||||||||||||||||||| || |||||  ||||||||||||||    
T  17580 attttaaaattagatagttttgattcttccatcatattttttaactatagaaatgcgatgtgataaatttt 17650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 210
Target Start/End: Complemental strand, 10857 - 10776
Alignment:
Q  130 atatgcaggggtcggggttcaaaccccagacatcttatttcttca-tatttaattgtgtgagctccagccactaggctactt 210  Q
    ||||||||||| |||||||| |||||| |||| |  | |||| ||  ||| |||||||||||||| ||||||||||||||||    
T  10857 atatgcaggggccggggttcgaaccccggacaccccacttctccacaattaaattgtgtgagctctagccactaggctactt 10776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 163
Target Start/End: Complemental strand, 15389 - 15357
Alignment:
Q  131 tatgcaggggtcggggttcaaaccccagacatc 163  Q
    ||||||||||||||||||| |||||||||||||    
T  15389 tatgcaggggtcggggttcgaaccccagacatc 15357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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