View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5721-Insertion-3 (Length: 891)

Name: NF5721-Insertion-3
Description: NF5721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5721-Insertion-3
NF5721-Insertion-3
[»] chr7 (23 HSPs)
chr7 (327-713)||(4505878-4506260)
chr7 (712-891)||(34389064-34389243)
chr7 (715-890)||(8867740-8867915)
chr7 (8-222)||(4505509-4505734)
chr7 (741-890)||(35090177-35090326)
chr7 (715-891)||(37002152-37002328)
chr7 (732-891)||(5555487-5555646)
chr7 (715-891)||(26624728-26624905)
chr7 (735-891)||(3114104-3114260)
chr7 (709-891)||(33685541-33685723)
chr7 (732-891)||(8394125-8394284)
chr7 (741-888)||(14777118-14777265)
chr7 (732-891)||(36630816-36630975)
chr7 (755-891)||(38638244-38638380)
chr7 (751-891)||(40920011-40920151)
chr7 (715-891)||(43184476-43184652)
chr7 (750-891)||(36658199-36658340)
chr7 (715-891)||(7002708-7002884)
chr7 (715-891)||(7048579-7048755)
chr7 (791-858)||(10868514-10868583)
chr7 (709-777)||(10876829-10876897)
chr7 (732-807)||(26502810-26502885)
chr7 (732-807)||(26589829-26589904)
[»] chr6 (11 HSPs)
chr6 (715-891)||(28996713-28996889)
chr6 (732-891)||(18339106-18339265)
chr6 (732-891)||(34948766-34948925)
chr6 (715-883)||(29743266-29743434)
chr6 (733-888)||(398618-398773)
chr6 (732-891)||(13837821-13837980)
chr6 (748-886)||(33229349-33229487)
chr6 (718-828)||(31028435-31028545)
chr6 (716-817)||(24697899-24698000)
chr6 (715-768)||(13647000-13647053)
chr6 (715-768)||(34385519-34385572)
[»] chr5 (22 HSPs)
chr5 (711-891)||(37254620-37254800)
chr5 (715-891)||(31680350-31680526)
chr5 (715-890)||(17332560-17332735)
chr5 (710-888)||(12278871-12279049)
chr5 (715-887)||(31501728-31501900)
chr5 (746-891)||(33430335-33430480)
chr5 (732-891)||(10033927-10034086)
chr5 (732-891)||(13817977-13818136)
chr5 (732-888)||(39434696-39434852)
chr5 (752-891)||(39657514-39657653)
chr5 (750-888)||(16155015-16155153)
chr5 (732-885)||(36293635-36293788)
chr5 (741-888)||(26283329-26283476)
chr5 (734-884)||(1776391-1776541)
chr5 (762-890)||(16333885-16334013)
chr5 (715-891)||(36291354-36291530)
chr5 (732-883)||(3155647-3155798)
chr5 (751-886)||(43068896-43069031)
chr5 (741-888)||(19985948-19986095)
chr5 (745-858)||(28801300-28801415)
chr5 (715-817)||(202622-202724)
chr5 (715-788)||(26543876-26543949)
[»] chr3 (19 HSPs)
chr3 (715-891)||(45182964-45183140)
chr3 (715-889)||(6930904-6931078)
chr3 (712-891)||(11018220-11018399)
chr3 (715-891)||(33040936-33041112)
chr3 (712-891)||(27935158-27935337)
chr3 (732-888)||(19390146-19390302)
chr3 (715-883)||(19565517-19565685)
chr3 (711-887)||(6503581-6503757)
chr3 (741-888)||(6269437-6269584)
chr3 (715-883)||(45335858-45336025)
chr3 (733-888)||(22968455-22968610)
chr3 (732-887)||(34084134-34084289)
chr3 (733-888)||(39771791-39771946)
chr3 (745-891)||(40081749-40081893)
chr3 (715-891)||(35514249-35514421)
chr3 (754-858)||(5135291-5135397)
chr3 (715-832)||(5354692-5354809)
chr3 (715-769)||(6890981-6891035)
chr3 (732-789)||(22922157-22922214)
[»] chr4 (40 HSPs)
chr4 (715-891)||(6690243-6690419)
chr4 (715-889)||(3292906-3293080)
chr4 (712-887)||(43143596-43143771)
chr4 (731-891)||(30216750-30216910)
chr4 (715-891)||(50205085-50205261)
chr4 (732-891)||(25930708-25930867)
chr4 (712-887)||(42333788-42333963)
chr4 (715-881)||(10352902-10353068)
chr4 (733-888)||(20129311-20129466)
chr4 (749-891)||(44156668-44156810)
chr4 (715-891)||(48989311-48989487)
chr4 (732-891)||(36382354-36382512)
chr4 (733-888)||(13012189-13012344)
chr4 (733-888)||(26439290-26439445)
chr4 (733-888)||(34407295-34407450)
chr4 (733-888)||(47500774-47500929)
chr4 (742-891)||(29319713-29319862)
chr4 (715-890)||(29995992-29996167)
chr4 (732-891)||(40529013-40529174)
chr4 (732-887)||(17511245-17511400)
chr4 (743-887)||(28877262-28877406)
chr4 (756-887)||(35545977-35546108)
chr4 (733-888)||(43355905-43356060)
chr4 (715-883)||(30077647-30077814)
chr4 (715-886)||(26448036-26448206)
chr4 (799-891)||(6235587-6235679)
chr4 (767-886)||(1817752-1817871)
chr4 (715-887)||(13392893-13393054)
chr4 (715-887)||(13396032-13396193)
chr4 (721-858)||(30109945-30110084)
chr4 (744-858)||(48129978-48130087)
chr4 (732-817)||(27363361-27363446)
chr4 (757-825)||(6254569-6254637)
chr4 (715-769)||(49908782-49908836)
chr4 (712-773)||(7769308-7769369)
chr4 (715-832)||(45194159-45194276)
chr4 (715-769)||(5517494-5517548)
chr4 (715-768)||(6212029-6212082)
chr4 (715-768)||(17554979-17555032)
chr4 (716-769)||(50720476-50720529)
[»] chr2 (23 HSPs)
chr2 (715-891)||(45418566-45418742)
chr2 (715-891)||(8147334-8147511)
chr2 (741-891)||(771008-771158)
chr2 (732-890)||(42439986-42440144)
chr2 (735-888)||(41251645-41251798)
chr2 (715-891)||(44084611-44084787)
chr2 (750-891)||(12756845-12756986)
chr2 (732-891)||(35962715-35962874)
chr2 (735-891)||(16405603-16405759)
chr2 (733-888)||(6403815-6403970)
chr2 (732-891)||(31581630-31581789)
chr2 (732-891)||(32127149-32127308)
chr2 (732-888)||(17445052-17445206)
chr2 (715-891)||(8059341-8059517)
chr2 (732-891)||(18981617-18981775)
chr2 (732-869)||(2958131-2958267)
chr2 (757-889)||(2285887-2286019)
chr2 (751-891)||(26162710-26162847)
chr2 (731-846)||(26237956-26238071)
chr2 (756-858)||(4555250-4555354)
chr2 (741-858)||(7072589-7072710)
chr2 (752-807)||(34905969-34906024)
chr2 (715-788)||(34523223-34523296)
[»] chr8 (16 HSPs)
chr8 (715-888)||(23402091-23402264)
chr8 (718-891)||(16788033-16788206)
chr8 (712-887)||(4403988-4404163)
chr8 (732-887)||(34136837-34136992)
chr8 (732-891)||(15838286-15838444)
chr8 (732-891)||(29728394-29728553)
chr8 (746-891)||(3648802-3648947)
chr8 (719-886)||(36408538-36408705)
chr8 (754-886)||(9877242-9877374)
chr8 (733-888)||(39914516-39914670)
chr8 (715-887)||(2729208-2729380)
chr8 (748-858)||(3435285-3435397)
chr8 (764-890)||(42230971-42231095)
chr8 (755-825)||(40470567-40470637)
chr8 (708-768)||(34844739-34844799)
chr8 (747-817)||(10397122-10397192)
[»] scaffold0502 (1 HSPs)
scaffold0502 (732-891)||(5230-5389)
[»] chr1 (15 HSPs)
chr1 (711-889)||(35907531-35907709)
chr1 (715-891)||(17445296-17445472)
chr1 (732-888)||(32982067-32982223)
chr1 (733-888)||(26144256-26144411)
chr1 (736-891)||(7433449-7433604)
chr1 (747-891)||(42310949-42311093)
chr1 (741-891)||(321385-321535)
chr1 (715-891)||(3828967-3829142)
chr1 (733-858)||(41972314-41972440)
chr1 (715-858)||(33489670-33489815)
chr1 (741-838)||(23313247-23313345)
chr1 (715-769)||(31866960-31867014)
chr1 (751-817)||(35951427-35951493)
chr1 (751-797)||(48901207-48901253)
chr1 (731-768)||(44352614-44352651)
[»] scaffold0041 (1 HSPs)
scaffold0041 (751-891)||(52944-53084)
[»] scaffold0154 (1 HSPs)
scaffold0154 (715-888)||(31463-31636)
[»] scaffold0002 (1 HSPs)
scaffold0002 (733-888)||(480468-480623)
[»] scaffold0069 (1 HSPs)
scaffold0069 (732-888)||(17842-17998)
[»] scaffold2142 (1 HSPs)
scaffold2142 (741-888)||(531-678)
[»] scaffold0769 (1 HSPs)
scaffold0769 (715-788)||(1260-1333)
[»] scaffold0012 (1 HSPs)
scaffold0012 (731-791)||(194027-194087)


Alignment Details
Target: chr7 (Bit Score: 248; Significance: 1e-137; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 327 - 713
Target Start/End: Original strand, 4505878 - 4506260
Alignment:
Q  327 ctggtaatttatttttagcatcaaagataaaatgtattggtgaaaaaattaaagaaagaaaaggggatgatattttatatacacaagaacagctgataat 426  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  4505878 ctggtaatttatttttagcatcaaaggtaaaatgtattggtgaaaaaattaaagaaagaaaaggg-atgatattttatatacacaagaacagctgataat 4505976  T
Q  427 ttgttcttgcg-tatgannnnnnncagctatttgtggtctcttcttcgtaattggttagatatctcttcaactgatcggtcttgtattttatatcatttg 525  Q
    ||||||||| | |||||       ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4505977 ttgttcttggggtatgatttttt-cagctatttgtggtctctttttcgtaattggttagatatctcttcaactgatcggtcttgtattttatatcatttg 4506075  T
Q  526 tatcaattcgcttattttggagggcattcaagatctcttagaacttcatttaagttgttttggttttcttgcgtatgagtgatatggaaagaaagaaata 625  Q
    ||||| || |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  4506076 tatcagtttgcttattttggagggcattcaagatctcttagaatttcgtttaagttgttttggttttcttgggtatgagtgatatggaaagaaagaaata 4506175  T
Q  626 ttagagttttttactcggaaggnnnnnnnntattcatcagttgttagacaattagtttaaactactttcttttttatggttgaaagca 713  Q
    ||||||| |||||||| |||||          |  |||||||||||||||   |||||||||||||||||||||||| ||||||||||    
T  4506176 ttagagtattttactcagaaggaaaaaaatgttctatcagttgttagaca---agtttaaactactttcttttttatagttgaaagca 4506260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 712 - 891
Target Start/End: Complemental strand, 34389243 - 34389064
Alignment:
Q  712 catgggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacattta 811  Q
    |||||||| |||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||    
T  34389243 catgggcgatttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacccaaaagctaattaacacactta 34389144  T
Q  812 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  34389143 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattatcgacggg 34389064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 715 - 890
Target Start/End: Complemental strand, 8867915 - 8867740
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaa 814  Q
    |||| ||||||| || ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||| ||||||||||    
T  8867915 gggcagtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcatattagacccaatccaaaagccaattaatacatttacaa 8867816  T
Q  815 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgg 890  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  8867815 aaagaaaaatttgggcaatcggaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacgg 8867740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 8 - 222
Target Start/End: Original strand, 4505509 - 4505734
Alignment:
Q  8 ttcttattatcttttatggggtgttgataatttcacataatcagattttatggtaggtcatttaaaacat-------cactgtttttagtttaaaattgg 100  Q
    |||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||       |||| ||||||||||||||||||    
T  4505509 ttcttattattttttatggagtgttgattatttcacataatcagattttatggtaggtcatttaaaacatgtcacatcactatttttagtttaaaattgg 4505608  T
Q  101 ataaaatgaccaaaaccaaa---gttttaaatgaagggatcaatttcatgagcgggtaacaa-taggtcatgaaaactgtactttgaagtcaattccaat 196  Q
    || |||||||||||||||||   ||||||| ||||||||||||||||| ||||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  4505609 atgaaatgaccaaaaccaaataagttttaattgaagggatcaatttcaggagcgggtaacaaatcggtcatcaaaactgtactttgaagtcaattccaat 4505708  T
Q  197 aatttctttgattatatccaccactt 222  Q
    ||||| |||||||||||| |||||||    
T  4505709 aatttttttgattatatctaccactt 4505734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 741 - 890
Target Start/End: Original strand, 35090177 - 35090326
Alignment:
Q  741 gggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 840  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  35090177 gggcggtcgcccgggctcgatcaataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggtaatctgaaaa 35090276  T
Q  841 ttctcacacgcaaataggtctcggaattttatttagcacactattgacgg 890  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35090277 ttctcacacgcaaataggtctcggaattttatttagcacactattgacgg 35090326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 715 - 891
Target Start/End: Complemental strand, 37002328 - 37002152
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaa 814  Q
    |||||||||||| || ||||||||| |||||||||  ||| |||||||||||||||||||||||||||||||| | ||||| ||||||||||| ||||||    
T  37002328 gggcggtttcaccgcccggcgaccccgggcggtcgttcggtctcgatcgataatttttgcacattagacccaatccaaaagtcaattaacacacttacaa 37002229  T
Q  815 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  37002228 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacggg 37002152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 732 - 891
Target Start/End: Original strand, 5555487 - 5555646
Alignment:
Q  732 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggca 831  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||| ||||||||||||||||||||||||||    
T  5555487 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacgcatttacaaaaagaaaaatttgggca 5555586  T
Q  832 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    ||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||    
T  5555587 atctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacggg 5555646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 715 - 891
Target Start/End: Original strand, 26624728 - 26624905
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgat-cgataatttttgcacattagacccaacctaaaagccaattaacacatttaca 813  Q
    |||||||||||| || |||| |||| ||||||||||| ||||||||| |||||||||||||| ||||||||||| | |||||  |||||||||| |||||    
T  26624728 gggcggtttcaccgcccggcaaccccgggcggtcgcctgggctcgattcgataatttttgcatattagacccaatccaaaagttaattaacacacttaca 26624827  T
Q  814 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26624828 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 26624905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 735 - 891
Target Start/End: Complemental strand, 3114260 - 3114104
Alignment:
Q  735 gaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaatc 834  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  3114260 gaccccggacggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatc 3114161  T
Q  835 tgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    |||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||    
T  3114160 tgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacggg 3114104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 709 - 891
Target Start/End: Original strand, 33685541 - 33685723
Alignment:
Q  709 aagcatgggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacat 808  Q
    ||||| |||||||||||| || |||||||||  ||| ||||| ||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||     
T  33685541 aagcaggggcggtttcaccgcccggcgaccccaggcagtcgctcgggctcgatcgataatttttgcacattaaacccaacccaaaagcccattaacacac 33685640  T
Q  809 ttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| |||||  |||||||||||||||||||||||||||    
T  33685641 ttacaaaaagaaaaatttgggcaatctgaaaattctcatacgcaaatatgtctcataattttatttagcacactattgacggg 33685723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 732 - 891
Target Start/End: Original strand, 8394125 - 8394284
Alignment:
Q  732 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggca 831  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| || ||||| ||||| | |||||||||||||||||| ||||||||||||||    
T  8394125 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaaggaaaaatttgggca 8394224  T
Q  832 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    ||||||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||    
T  8394225 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacggg 8394284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 741 - 888
Target Start/End: Complemental strand, 14777265 - 14777118
Alignment:
Q  741 gggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 840  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  14777265 gggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagctcattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 14777166  T
Q  841 ttctcacacgcaaataggtctcggaattttatttagcacactattgac 888  Q
    || ||||||| |||||||||| ||||||||||||||||||||||||||    
T  14777165 ttgtcacacgtaaataggtcttggaattttatttagcacactattgac 14777118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 732 - 891
Target Start/End: Original strand, 36630816 - 36630975
Alignment:
Q  732 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggca 831  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||| || ||||| ||||| | |||||||||||||||||||||||||||||||||    
T  36630816 ggcgaccccggacggtcgcccgggctcgatcgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaaagaaaaatttgggca 36630915  T
Q  832 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    ||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||    
T  36630916 atctgaaaattgtcacacgcaaataggtcttggaattttagttagcacactattgacggg 36630975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 755 - 891
Target Start/End: Complemental strand, 38638380 - 38638244
Alignment:
Q  755 gctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaa 854  Q
    ||||||| |||||||||||||||||||| |||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  38638380 gctcgattgataatttttgcacattagatccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaa 38638281  T
Q  855 taggtctcggaattttatttagcacactattgacggg 891  Q
    |||||||||||||||||||||||||||||||||||||    
T  38638280 taggtctcggaattttatttagcacactattgacggg 38638244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 751 - 891
Target Start/End: Complemental strand, 40920151 - 40920011
Alignment:
Q  751 ccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattctcacacg 850  Q
    ||||||||||||||||||||||||||||||||   |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |    
T  40920151 ccgggctcgatcgataatttttgcacattagatttaacccaaaagccaattaacacatttacaaaaagaaaaatttggacaatctgaaaattctcacatg 40920052  T
Q  851 caaataggtctcggaattttatttagcacactattgacggg 891  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  40920051 caaataggtctcggaattttatttagcacactattgacggg 40920011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 715 - 891
Target Start/End: Complemental strand, 43184652 - 43184476
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaa 814  Q
    |||||||||||| || ||||||  | |||||||||| ||||||||||||||||||||| | ||| ||||  |||| ||||||||||||||| | ||||||    
T  43184652 gggcggtttcaccgcccggcgattccgggcggtcgctcgggctcgatcgataatttttacgcatcagacttaacccaaaagccaattaacatacttacaa 43184553  T
Q  815 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  43184552 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctctgaattttatttagcacactattgacggg 43184476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 750 - 891
Target Start/End: Original strand, 36658199 - 36658340
Alignment:
Q  750 cccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattctcacac 849  Q
    ||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||| | | ||||||| |||||||||||||||||||||||||||||||    
T  36658199 cccggactcgatcgataatttttgcacattggacccaaccgaaaagccaattaacatactaacaaaaataaaaatttgggcaatctgaaaattctcacac 36658298  T
Q  850 gcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  36658299 gcaaataggtctcggaattttatttagcacactattgacggg 36658340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 715 - 891
Target Start/End: Original strand, 7002708 - 7002884
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaa 814  Q
    |||||||||||| || ||||||||| | ||||||||||||||||||||||  ||||||  |||||| |||||||| |||||||||||||||||  |||||    
T  7002708 gggcggtttcaccgcccggcgaccccgagcggtcgcccgggctcgatcgacgatttttctacattacacccaacccaaaagccaattaacacacatacaa 7002807  T
Q  815 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    ||| |||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  7002808 aaataaaaatttggacaatctaaaaattctcacacgcaaataggtcacggaattttatttagcacactattgacggg 7002884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 715 - 891
Target Start/End: Original strand, 7048579 - 7048755
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaa 814  Q
    |||||||||||| || ||||||||| | ||||||||||||||||||||||  ||||||  |||||| |||||||| |||||||||||||||||  |||||    
T  7048579 gggcggtttcaccgcccggcgaccccgagcggtcgcccgggctcgatcgacgatttttctacattacacccaacccaaaagccaattaacacacatacaa 7048678  T
Q  815 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    ||| |||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  7048679 aaataaaaatttggacaatctaaaaattctcacacgcaaataggtcacggaattttatttagcacactattgacggg 7048755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 791 - 858
Target Start/End: Complemental strand, 10868583 - 10868514
Alignment:
Q  791 aaaagccaattaacacatttacaaaaagaaaaatttgggc--aatctgaaaattctcacacgcaaatagg 858  Q
    ||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||    
T  10868583 aaaagcccattaacacatttacaaaaagaaaaatttgggcaaaatctgaaaattctcacgcgcaaatagg 10868514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 709 - 777
Target Start/End: Complemental strand, 10876897 - 10876829
Alignment:
Q  709 aagcatgggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcaca 777  Q
    ||||| |||| |||||||| | |||||| || | | |||||||||||||||||||||||||||||||||    
T  10876897 aagcaggggcagtttcacttcccggcgaacccgtgtggtcgcccgggctcgatcgataatttttgcaca 10876829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 732 - 807
Target Start/End: Original strand, 26502810 - 26502885
Alignment:
Q  732 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacaca 807  Q
    ||||||||  ||| |||||||||||||||||||   |||||||| ||||  ||||||| ||||||| |||||||||    
T  26502810 ggcgaccccaggcagtcgcccgggctcgatcgaatttttttgcatattaagcccaacccaaaagcccattaacaca 26502885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 732 - 807
Target Start/End: Complemental strand, 26589904 - 26589829
Alignment:
Q  732 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacaca 807  Q
    ||||||||  ||| |||||||||||||||||||   |||||||| ||||  ||||||| ||||||| |||||||||    
T  26589904 ggcgaccccaggcagtcgcccgggctcgatcgaatttttttgcatattaagcccaacccaaaagcccattaacaca 26589829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 149; Significance: 3e-78; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 715 - 891
Target Start/End: Original strand, 28996713 - 28996889
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaa 814  Q
    |||||||||||| || ||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||    
T  28996713 gggcggtttcaccgcccggcgaccccgggcggtcgcccgagctcgatcgataatttttgcgcattagacccaacctaaaagtcaattaacacacttacaa 28996812  T
Q  815 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28996813 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 28996889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 732 - 891
Target Start/End: Original strand, 18339106 - 18339265
Alignment:
Q  732 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggca 831  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||    
T  18339106 ggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattagacccaatctaaaagccaattaacacacttacaaaaagaaaattttgggca 18339205  T
Q  832 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  18339206 atctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacggg 18339265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 732 - 891
Target Start/End: Complemental strand, 34948925 - 34948766
Alignment:
Q  732 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggca 831  Q
    ||||||||  ||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||    
T  34948925 ggcgaccccaggcggtcgcccaggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 34948826  T
Q  832 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    ||||||||||| |||||| ||||||| ||| | |||||||||||||||||||||||||||    
T  34948825 atctgaaaattgtcacacacaaatagatcttgaaattttatttagcacactattgacggg 34948766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 715 - 883
Target Start/End: Original strand, 29743266 - 29743434
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaa 814  Q
    |||||||||||| |  || ||| || ||||||| |||||||||| |||||||||||||||||||||||||||||| |||||   |||||||||||||||     
T  29743266 gggcggtttcaccgtccgacgatcccgggcggttgcccgggctcaatcgataatttttgcacattagacccaaccaaaaagttcattaacacatttacag 29743365  T
Q  815 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacta 883  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  29743366 aaagaaaaatttgggcaatctgaaaattcttacacgcaaataggtctcggaattttatttagcacacta 29743434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 733 - 888
Target Start/End: Original strand, 398618 - 398773
Alignment:
Q  733 gcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaa 832  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||  ||||||||||||| ||||||||||||||||||||    
T  398618 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaagaaaaatttgggcaa 398717  T
Q  833 tctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgac 888  Q
    | |||||||| ||||||| |||||||||| |||||||||||| |||||||||||||    
T  398718 tttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgac 398773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 732 - 891
Target Start/End: Original strand, 13837821 - 13837980
Alignment:
Q  732 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggca 831  Q
    |||||||| ||||| |||| |||| ||||||||||||||||| ||||||||| ||||| ||||||  || ||||||||||||||||||||||||||||||    
T  13837821 ggcgaccccgggcgatcgctcgggttcgatcgataatttttgtacattagactcaacccaaaagcacatcaacacatttacaaaaagaaaaatttgggca 13837920  T
Q  832 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  13837921 atctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacggg 13837980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 748 - 886
Target Start/End: Complemental strand, 33229487 - 33229349
Alignment:
Q  748 cgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattctcac 847  Q
    |||||||||||||||||| ||||||| ||||||||||||||| ||||| | |||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  33229487 cgcccgggctcgatcgatcatttttgtacattagacccaacccaaaagtccattaacacatttccaaaaagaaaaatttgggcaatctgaaaattcttac 33229388  T
Q  848 acgcaaataggtctcggaattttatttagcacactattg 886  Q
    ||| ||||| ||||||| |||||||||||||||||||||    
T  33229387 acgtaaataagtctcgggattttatttagcacactattg 33229349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 718 - 828
Target Start/End: Complemental strand, 31028545 - 31028435
Alignment:
Q  718 cggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaa 817  Q
    ||||||||| || ||||||||| | ||||| |||||| ||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||    
T  31028545 cggtttcaccgcccggcgaccccgagcggttgcccggactcgatcgataatttttgcacattagatccaacctaaaagctcattaacacatttacaaaaa 31028446  T
Q  818 gaaaaatttgg 828  Q
    | ||| |||||    
T  31028445 ggaaattttgg 31028435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 716 - 817
Target Start/End: Complemental strand, 24698000 - 24697899
Alignment:
Q  716 ggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaa 815  Q
    ||||||||||| || ||||||||| || |  |||||||||||| ||||||||||||| |||||||| ||||||| ||||||| ||||||||| |||||||    
T  24698000 ggcggtttcaccgcccggcgaccccggacactcgcccgggctcaatcgataattttttcacattaggcccaacccaaaagcccattaacacacttacaaa 24697901  T
Q  816 aa 817  Q
    ||    
T  24697900 aa 24697899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 715 - 768
Target Start/End: Original strand, 13647000 - 13647053
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataat 768  Q
    ||||||||||||  | ||||||||| ||||||||||||||||||||||||||||    
T  13647000 gggcggtttcaccacccggcgaccccgggcggtcgcccgggctcgatcgataat 13647053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 715 - 768
Target Start/End: Complemental strand, 34385572 - 34385519
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataat 768  Q
    |||||||||||| || ||||||||| ||||||| |||| |||||||||||||||    
T  34385572 gggcggtttcaccgcccggcgaccccgggcggttgccctggctcgatcgataat 34385519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 149; Significance: 3e-78; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 711 - 891
Target Start/End: Original strand, 37254620 - 37254800
Alignment:
Q  711 gcatgggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacattt 810  Q
    |||||||||||||||| ||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||    
T  37254620 gcatgggcggtttcaccgctcggcgaccccaggcggtcgcccaggctcgatcgataatttttgcacattagacccaacccaaaagtcaattaacacactt 37254719  T
Q  811 acaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  37254720 acaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacggg 37254800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 145; E-Value: 8e-76
Query Start/End: Original strand, 715 - 891
Target Start/End: Original strand, 31680350 - 31680526
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaa 814  Q
    |||||||||||| || ||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||| ||||||    
T  31680350 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttccgcattagacccaacccaaaagccaattaacacacttacaa 31680449  T
Q  815 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  31680450 aaagaaaaatttgggcaatctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacggg 31680526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 715 - 890
Target Start/End: Complemental strand, 17332735 - 17332560
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaa 814  Q
    |||||||||||| || ||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||    
T  17332735 gggcggtttcaccgcccggcgaccccgggcgttcgcccgggctcgatcgataatttttgcatattagacccaacccaaaagccaattaacacacttacaa 17332636  T
Q  815 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgg 890  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  17332635 aaagaaaaatttgggcaatctgaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacgg 17332560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 710 - 888
Target Start/End: Complemental strand, 12279049 - 12278871
Alignment:
Q  710 agcatgggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatt 809  Q
    |||| |||||||||||| || |||||| || |||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||| |    
T  12279049 agcaggggcggtttcaccgcccggcgatcccgggcggtcgcccggactcgatcgataatttttgcacattagacccaacccaaaggccaattaacacact 12278950  T
Q  810 tacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgac 888  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12278949 tacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgac 12278871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 715 - 887
Target Start/End: Complemental strand, 31501900 - 31501728
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaa 814  Q
    |||||||||||| || ||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  31501900 gggcggtttcaccgcccggcgaccccgggcgattgcccgggctcgatcgataatttttgcacattagacccaacccaaaagccaattaacacacttacaa 31501801  T
Q  815 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattga 887  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  31501800 aaagaaaaatttgggcaatctgaaaattctcgcacgcaaataggtctcgaaattttatttagcacactattga 31501728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 746 - 891
Target Start/End: Original strand, 33430335 - 33430480
Alignment:
Q  746 gtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattctc 845  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  33430335 gtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctc 33430434  T
Q  846 acacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  33430435 acacgcaaataggtctcggaattttatttagcacactattgacggg 33430480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 732 - 891
Target Start/End: Original strand, 10033927 - 10034086
Alignment:
Q  732 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggca 831  Q
    |||||||| || || ||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||    
T  10033927 ggcgaccccggacgatcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 10034026  T
Q  832 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  10034027 atctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacggg 10034086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 732 - 891
Target Start/End: Original strand, 13817977 - 13818136
Alignment:
Q  732 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggca 831  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||    
T  13817977 ggcgaccccgggcggtcgctcgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 13818076  T
Q  832 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    ||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||    
T  13818077 atctgaaaattgtcacacgcaaataggtcttggaaatttatttagcacactattgacggg 13818136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 732 - 888
Target Start/End: Original strand, 39434696 - 39434852
Alignment:
Q  732 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggca 831  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||| |||||||||||||||||| ||||||||||||||    
T  39434696 ggcgaccctgggcggtcgcccgggctcgatcgataattttttcacattagactcaacccaaaagcccattaacacatttacaaaatgaaaaatttgggca 39434795  T
Q  832 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgac 888  Q
    ||||||||||| ||||| | ||||||||||  |||||||||||||||||||||||||    
T  39434796 atctgaaaattgtcacatgtaaataggtctttgaattttatttagcacactattgac 39434852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 752 - 891
Target Start/End: Complemental strand, 39657653 - 39657514
Alignment:
Q  752 cgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattctcacacgc 851  Q
    |||||||||| ||||||||||||||||||||| ||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  39657653 cgggctcgattgataatttttgcacattagactcaacccaaaagctcattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgc 39657554  T
Q  852 aaataggtctcggaattttatttagcacactattgacggg 891  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  39657553 aaataggtcttggaattttatttagcacactattgacggg 39657514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 750 - 888
Target Start/End: Original strand, 16155015 - 16155153
Alignment:
Q  750 cccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattctcacac 849  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||| |||||||||||||| ||||||||||||||| ||||||    
T  16155015 cccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttaggcaatctgaaaattgtcacac 16155114  T
Q  850 gcaaataggtctcggaattttatttagcacactattgac 888  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  16155115 gcaaataggtcttggaattttatttagcacactattgac 16155153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 732 - 885
Target Start/End: Complemental strand, 36293788 - 36293635
Alignment:
Q  732 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggca 831  Q
    |||||||| | ||||||| |||| |||||||||||||||||| ||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||    
T  36293788 ggcgaccccgagcggtcgtccggactcgatcgataatttttgtacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 36293689  T
Q  832 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactatt 885  Q
    ||||||||||| ||||||| |||||||||| |||||||||||||||||||||||    
T  36293688 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactatt 36293635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 741 - 888
Target Start/End: Complemental strand, 26283476 - 26283329
Alignment:
Q  741 gggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 840  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||   ||||||||||||| ||||||||||||||||||||||||||||    
T  26283476 gggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagttcattaacacatttataaaaagaaaaatttgggcaatctgaaaa 26283377  T
Q  841 ttctcacacgcaaataggtctcggaattttatttagcacactattgac 888  Q
    || ||||||| |||||||||| |||||||||||| |||||||||||||    
T  26283376 ttgtcacacgtaaataggtcttggaattttatttggcacactattgac 26283329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 734 - 884
Target Start/End: Complemental strand, 1776541 - 1776391
Alignment:
Q  734 cgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaat 833  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||| |  ||||| ||||| | |||||||||||||||||||||||||||||||||||    
T  1776541 cgaccccgggcggtcgcccgggctcgatcgataatttttgtacattaaagtcaaccaaaaagtccattaacacatttacaaaaagaaaaatttgggcaat 1776442  T
Q  834 ctgaaaattctcacacgcaaataggtctcggaattttatttagcacactat 884  Q
     |||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  1776441 ttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactat 1776391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 762 - 890
Target Start/End: Complemental strand, 16334013 - 16333885
Alignment:
Q  762 cgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtct 861  Q
    |||||||||||||||||||||  ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  16334013 cgataatttttgcacattagattcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtct 16333914  T
Q  862 cggaattttatttagcacactattgacgg 890  Q
     ||||||||||||||||||||||||||||    
T  16333913 tggaattttatttagcacactattgacgg 16333885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 715 - 891
Target Start/End: Original strand, 36291354 - 36291530
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaa 814  Q
    |||||||||||| || || |||| | ||||||||| ||||| |||||| ||||||||||||||||||| | ||||||||||   ||||||||||||||||    
T  36291354 gggcggtttcaccgcccgccgactccgggcggtcgtccgggttcgatcaataatttttgcacattagatctaacctaaaagttcattaacacatttacaa 36291453  T
Q  815 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    ||||||||||||||||||||| |||||| | |||| |||||||||||| |||||||||||| |||||||||||||||    
T  36291454 aaagaaaaatttgggcaatctcaaaattattacacacaaataggtctcagaattttatttaacacactattgacggg 36291530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 732 - 883
Target Start/End: Complemental strand, 3155798 - 3155647
Alignment:
Q  732 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggca 831  Q
    ||||| || |||||||||| ||||||||||| |||||||||||||||| ||| ||||||||||| | ||||||||||||| |||||||||||||||| ||    
T  3155798 ggcgatcccgggcggtcgctcgggctcgatcaataatttttgcacattcgactcaacctaaaagtccattaacacatttataaaaagaaaaatttggaca 3155699  T
Q  832 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacacta 883  Q
    ||||||||||| |||||||||||||| ||| |||||||||||||||||||||    
T  3155698 atctgaaaattgtcacacgcaaatagatcttggaattttatttagcacacta 3155647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 751 - 886
Target Start/End: Original strand, 43068896 - 43069031
Alignment:
Q  751 ccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattctcacacg 850  Q
    |||||||||||| ||||||||| |||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||| ||| |    
T  43068896 ccgggctcgatcaataattttttcacattagacccaacccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattcttacatg 43068995  T
Q  851 caaataggtctcggaattttatttagcacactattg 886  Q
     ||||| |||||||||||||||||||||||||||||    
T  43068996 taaataagtctcggaattttatttagcacactattg 43069031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 741 - 888
Target Start/End: Original strand, 19985948 - 19986095
Alignment:
Q  741 gggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 840  Q
    ||||||||| ||| ||||||||||||||||||||||||||||  ||||| ||||| | |||| |||||||||||||||||||||||||| ||||| ||||    
T  19985948 gggcggtcgtccgagctcgatcgataatttttgcacattagattcaacccaaaagtccattagcacatttacaaaaagaaaaatttgggtaatctaaaaa 19986047  T
Q  841 ttctcacacgcaaataggtctcggaattttatttagcacactattgac 888  Q
    || |||||||||||||||||| | ||||||||||| ||||||||||||    
T  19986048 ttatcacacgcaaataggtcttgaaattttatttaacacactattgac 19986095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 745 - 858
Target Start/End: Original strand, 28801300 - 28801415
Alignment:
Q  745 ggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttggg--caatctgaaaatt 842  Q
    |||||||| ||||||||||||||||||||||||||||| |||| | ||||||| ||||||||| |||||||||||||||||||||   ||| ||||||||    
T  28801300 ggtcgccctggctcgatcgataatttttgcacattagatccaaaccaaaagcccattaacacacttacaaaaagaaaaatttgggaaaaatatgaaaatt 28801399  T
Q  843 ctcacacgcaaatagg 858  Q
    ||||||||||||||||    
T  28801400 ctcacacgcaaatagg 28801415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 715 - 817
Target Start/End: Original strand, 202622 - 202724
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaa 814  Q
    |||||||||||| || || ||||||| || |||||||||||||||||||||||||| || |||||||  | |||| ||||||| ||||| ||| | ||||    
T  202622 gggcggtttcaccgcccgacgaccctaggtggtcgcccgggctcgatcgataatttgtgtacattaggtcgaacccaaaagcccattaagacactaacaa 202721  T
Q  815 aaa 817  Q
    |||    
T  202722 aaa 202724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 715 - 788
Target Start/End: Complemental strand, 26543949 - 26543876
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaac 788  Q
    ||||||||| || || ||||||||| ||||||||||||||||||||||  ||||||   |||||||| ||||||    
T  26543949 gggcggttttaccgcccggcgaccccgggcggtcgcccgggctcgatccgtaatttcctcacattaggcccaac 26543876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 149; Significance: 3e-78; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 715 - 891
Target Start/End: Original strand, 45182964 - 45183140
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaa 814  Q
    |||||||||||| || ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||    
T  45182964 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaa 45183063  T
Q  815 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  45183064 aaagaaaaatttgggcaatctgaaaattctcacacacaaataggtctcggaattttatttagcacactattgacggg 45183140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 715 - 889
Target Start/End: Complemental strand, 6931078 - 6930904
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaa 814  Q
    |||||||||||| || ||||||||| || ||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||    
T  6931078 gggcggtttcaccgcccggcgaccccggacggtcgcccgggctcgatcgataatttttgcgcattagatccaacccaaaagccaattaacacatttacaa 6930979  T
Q  815 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacg 889  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6930978 aaagaaaaatttaggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacg 6930904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 712 - 891
Target Start/End: Complemental strand, 11018399 - 11018220
Alignment:
Q  712 catgggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacattta 811  Q
    ||||||||||||||| |  ||||||| | |||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||    
T  11018399 catgggcggtttcaccgtccggcgactccgggcggtcgcccaggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 11018300  T
Q  812 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  11018299 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcagaattttatttagcacacaattgacggg 11018220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 715 - 891
Target Start/End: Original strand, 33040936 - 33041112
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaa 814  Q
    |||||||||||| || ||||||||| |||||||||| |||||||||| ||||||||||||| ||||||||||||| |||||| |||||||||| ||||||    
T  33040936 gggcggtttcaccgcccggcgaccccgggcggtcgctcgggctcgattgataatttttgcatattagacccaacccaaaagctaattaacacacttacaa 33041035  T
Q  815 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    |||||||||||||  |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  33041036 aaagaaaaatttgaacaatttgaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacggg 33041112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 712 - 891
Target Start/End: Original strand, 27935158 - 27935337
Alignment:
Q  712 catgggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacattta 811  Q
    |||||| |||||||| ||  ||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||  ||||||||| |||    
T  27935158 catgggtggtttcaccgcctggcaaccctgggcagtcgcccgggctcgatcgataatttttgcacattaaacccaacccaaaagctcattaacacactta 27935257  T
Q  812 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||    
T  27935258 caaaaagaaaaatttgggcaatctgaaaattctcatacgaaaataggtctcggaattttatttagcatactattgacggg 27935337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 732 - 888
Target Start/End: Original strand, 19390146 - 19390302
Alignment:
Q  732 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggca 831  Q
    |||||||| ||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||    
T  19390146 ggcgaccccgggcggtcgtccgggttcgatcgataatttttgcacattagactcaacctaaaagtctattaacacatttacaaaaagaaaaatttgggca 19390245  T
Q  832 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgac 888  Q
    ||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||    
T  19390246 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 19390302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 715 - 883
Target Start/End: Complemental strand, 19565685 - 19565517
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaa 814  Q
    |||||||||||| || |||||| || ||||||||||||||| || |||||||||||||||||||||||||||||| ||||  | ||||||||||||||||    
T  19565685 gggcggtttcaccgcccggcgatcccgggcggtcgcccgggttcaatcgataatttttgcacattagacccaaccaaaaaatccattaacacatttacaa 19565586  T
Q  815 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacta 883  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19565585 aaagaaaaatttggacaatctgaaaattcttacacgcaaataggtctcggaattttatttagcacacta 19565517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 711 - 887
Target Start/End: Complemental strand, 6503757 - 6503581
Alignment:
Q  711 gcatgggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacattt 810  Q
    |||||||||||||||| |  ||||||||| ||||||||||||||||||||||||| ||||||||| ||||||| ||||| |||||||||||| |||| ||    
T  6503757 gcatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgattatttttgcaaattagactcaacccaaaagccaattagcacactt 6503658  T
Q  811 acaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattga 887  Q
    ||||||||||||||||  |||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||    
T  6503657 acaaaaagaaaaatttaagcaatctgaaaattctcacaggcaaataggtctcggatttttatttagcacacaattga 6503581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 741 - 888
Target Start/End: Complemental strand, 6269584 - 6269437
Alignment:
Q  741 gggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 840  Q
    ||||||||| |||| |||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  6269584 gggcggtcgtccggactcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 6269485  T
Q  841 ttctcacacgcaaataggtctcggaattttatttagcacactattgac 888  Q
    || ||||||| |||||||||| ||||||||||||||||||||||||||    
T  6269484 ttgtcacacgtaaataggtcttggaattttatttagcacactattgac 6269437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 715 - 883
Target Start/End: Original strand, 45335858 - 45336025
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaa 814  Q
    |||||||||||| || ||||||||  |||||||||||||| ||| ||||||||||||| |||||||||||||||| ||||| || |||||||||||||||    
T  45335858 gggcggtttcaccgcccggcgacctcgggcggtcgcccggactcaatcgataatttttacacattagacccaaccaaaaagtca-ttaacacatttacaa 45335956  T
Q  815 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacta 883  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  45335957 aaagaaaaatctgggcaatctgaaaattcttacacgcaaataggtcttggaattttatttagcacacta 45336025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 733 - 888
Target Start/End: Complemental strand, 22968610 - 22968455
Alignment:
Q  733 gcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaa 832  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||  |||| ||||||| ||||||||||||||||||||||||||||||||||    
T  22968610 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagacttaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 22968511  T
Q  833 tctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgac 888  Q
    ||| |||||| ||||||| |||||||||| | ||||||||||||||||||||||||    
T  22968510 tctaaaaattgtcacacgtaaataggtcttgaaattttatttagcacactattgac 22968455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 732 - 887
Target Start/End: Complemental strand, 34084289 - 34084134
Alignment:
Q  732 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggca 831  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||| |  ||||| ||||| | |||||||||||||||||||||||||||||||||    
T  34084289 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattaaattcaaccaaaaagtccattaacacatttacaaaaagaaaaatttgggca 34084190  T
Q  832 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattga 887  Q
    || |||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  34084189 atatgaaaattatcacacgcaaataggtcttggaattttatttagcacactattga 34084134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 733 - 888
Target Start/End: Original strand, 39771791 - 39771946
Alignment:
Q  733 gcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaa 832  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||| ||||||||||||| ||||||||||||||||||||    
T  39771791 gcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttgggcaa 39771890  T
Q  833 tctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgac 888  Q
    |||||||||| ||||||| |||||||||| | ||||||||||  ||||||||||||    
T  39771891 tctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgac 39771946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 745 - 891
Target Start/End: Complemental strand, 40081893 - 40081749
Alignment:
Q  745 ggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattct 844  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||| ||||||  ||||||||||||||||||||||||||||||||||| |||||||| |    
T  40081893 ggtcgcccgggctcgatcgataatttttgaacattagactcaacc-aaaagctcattaacacatttacaaaaagaaaaatttgggcaatttgaaaattgt 40081795  T
Q  845 cacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    ||||||||||||| ||| || ||||| ||||||||||||||||||||    
T  40081794 cacacgcaaatagatcttgg-attttttttagcacactattgacggg 40081749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 715 - 891
Target Start/End: Original strand, 35514249 - 35514421
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaa 814  Q
    |||| ||||||| || ||||||||| || |||||| ||||||||||||||||||||| ||| | |||| |||||| ||||| | |||||||||    |||    
T  35514249 gggcagtttcaccgcccggcgaccccggacggtcgtccgggctcgatcgataattttcgcatactagatccaacccaaaagtccattaacaca----caa 35514344  T
Q  815 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    |||||||||||||| |||| ||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||    
T  35514345 aaagaaaaatttggacaatatgaaaattctcactcgcaaataggtctaggaattttattttgcacactattgacggg 35514421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 754 - 858
Target Start/End: Original strand, 5135291 - 5135397
Alignment:
Q  754 ggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggc--aatctgaaaattctcacacgc 851  Q
    |||||||||||| ||||||| ||||||||||||||||||||||  ||||||||| |||||||||||||||||||| |  |||| |||||||||||||| |    
T  5135291 ggctcgatcgattatttttgtacattagacccaacctaaaagctcattaacacacttacaaaaagaaaaatttggacaaaatccgaaaattctcacacac 5135390  T
Q  852 aaatagg 858  Q
    |||||||    
T  5135391 aaatagg 5135397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 715 - 832
Target Start/End: Original strand, 5354692 - 5354809
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaa 814  Q
    |||| ||||||| || ||||||||| ||||||||||||||||||||||  |||||||  ||||||||  |||||||| | ||| ||| ||||| ||  ||    
T  5354692 gggcagtttcaccgcccggcgaccccgggcggtcgcccgggctcgatccttaattttctcacattaggtccaacctataggcccatttacacacttcaaa 5354791  T
Q  815 aaagaaaaatttgggcaa 832  Q
    ||| ||||| ||||||||    
T  5354792 aaaaaaaaaattgggcaa 5354809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 715 - 769
Target Start/End: Original strand, 6890981 - 6891035
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatt 769  Q
    |||||||||||| || ||||||| | |||||||||||||||||||||||||||||    
T  6890981 gggcggtttcaccgcccggcgacaccgggcggtcgcccgggctcgatcgataatt 6891035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 732 - 789
Target Start/End: Original strand, 22922157 - 22922214
Alignment:
Q  732 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacc 789  Q
    ||||| || |||||||||| |||||||||||||| |||||||||||||| || |||||    
T  22922157 ggcgatcccgggcggtcgctcgggctcgatcgatcatttttgcacattaaactcaacc 22922214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 145; Significance: 8e-76; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 145; E-Value: 8e-76
Query Start/End: Original strand, 715 - 891
Target Start/End: Complemental strand, 6690419 - 6690243
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaa 814  Q
    |||||||||||| || ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||    
T  6690419 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaa 6690320  T
Q  815 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6690319 aaagaaaaatttgggcaaactgaaaattctcacacgcaaataggtctcgaaattttatttagcacactattgacggg 6690243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 715 - 889
Target Start/End: Complemental strand, 3293080 - 3292906
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaa 814  Q
    |||||||||||| || | | ||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||    
T  3293080 gggcggtttcaccgcccagtgaccccgggcggtcgcccgggctcgatcgataatttttgcccattagacccaacccaaaagccaattaacacacttacaa 3292981  T
Q  815 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacg 889  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3292980 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacg 3292906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 140; E-Value: 7e-73
Query Start/End: Original strand, 712 - 887
Target Start/End: Complemental strand, 43143771 - 43143596
Alignment:
Q  712 catgggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacattta 811  Q
    ||||||||||||||| |  || |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||    
T  43143771 catgggcggtttcaccgtccgacgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 43143672  T
Q  812 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattga 887  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  43143671 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 43143596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 731 - 891
Target Start/End: Complemental strand, 30216910 - 30216750
Alignment:
Q  731 cggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggc 830  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||    
T  30216910 cggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacccaaaagctaattaacacacttacaaaaagaaaaatttgggc 30216811  T
Q  831 aatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  30216810 aatctgaaaattctcacatgcaaatagatctcggaattttatttagcacactattgacggg 30216750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 715 - 891
Target Start/End: Complemental strand, 50205261 - 50205085
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaa 814  Q
    |||||||||||| |  |||||| || ||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||    
T  50205261 gggcggtttcaccgtccggcgatcccgggcggtcgcccgagctcgatcgataatttttgcacattagatccaacccaaaagccaattaacacacttacaa 50205162  T
Q  815 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  50205161 aaagaaaaaattggacaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacggg 50205085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 732 - 891
Target Start/End: Original strand, 25930708 - 25930867
Alignment:
Q  732 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggca 831  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||| ||||||| |||||||||||||||||||||||||||||||||    
T  25930708 ggcgaccctgggcggtcgcccgggctcgatctataatttttgcacattaaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 25930807  T
Q  832 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    || |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  25930808 atttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacggg 25930867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 712 - 887
Target Start/End: Complemental strand, 42333963 - 42333788
Alignment:
Q  712 catgggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacattta 811  Q
    ||||| ||||||||| |  | |||| || ||||||||| |||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||| |||    
T  42333963 catggacggtttcaccgtccagcgatcccgggcggtcgtccgggctcaatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 42333864  T
Q  812 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattga 887  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  42333863 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 42333788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 715 - 881
Target Start/End: Complemental strand, 10353068 - 10352902
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaa 814  Q
    |||||||||||| |  |||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||| ||||| | ||||||||||||||||    
T  10353068 gggcggtttcaccgtccggcgacccctggcggtcgcccgggctcaatcgataatttttgcacattagacccaaccaaaaagtccattaacacatttacaa 10352969  T
Q  815 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacac 881  Q
    || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10352968 aaggaaaaatttgggcaatctgaaaattcttacacgcaaataggtctcggaattttatttagcacac 10352902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 733 - 888
Target Start/End: Original strand, 20129311 - 20129466
Alignment:
Q  733 gcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaa 832  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  20129311 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 20129410  T
Q  833 tctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgac 888  Q
    |||||||||| ||||||| ||||||||||  ||||||||||| |||||||||||||    
T  20129411 tctgaaaattgtcacacgtaaataggtcttagaattttatttggcacactattgac 20129466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 749 - 891
Target Start/End: Original strand, 44156668 - 44156810
Alignment:
Q  749 gcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattctcaca 848  Q
    |||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||| |||||||||||||||| ||    
T  44156668 gcccgggctcaaccgataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaattttggacaatctgaaaattctctca 44156767  T
Q  849 cgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  44156768 cgcaaataggtctcggaattttatttagcacactattgacggg 44156810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 715 - 891
Target Start/End: Original strand, 48989311 - 48989487
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaa 814  Q
    |||| ||||||| || || |||| | ||||||||  ||||| |||||||||||||||||||||||| |||||||  ||||| | ||||||||| ||||||    
T  48989311 gggcagtttcaccgcccgacgactccgggcggtcaaccgggttcgatcgataatttttgcacattaaacccaactcaaaagtccattaacacacttacaa 48989410  T
Q  815 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  48989411 aaagaaaaatttgggcaatctgaaaattctcatacgcaaataggtctcggaattttatttagcacactattgacggg 48989487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 732 - 891
Target Start/End: Complemental strand, 36382512 - 36382354
Alignment:
Q  732 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggca 831  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||| || ||||| ||||| | |||||||||||||||||| ||||||||||| ||    
T  36382512 ggcgaccccgggcggtcgcccgggctcgatccataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaa-gaaaaatttggaca 36382414  T
Q  832 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  36382413 atctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacggg 36382354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 733 - 888
Target Start/End: Original strand, 13012189 - 13012344
Alignment:
Q  733 gcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaa 832  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||  ||||||||||||| ||||||||||||||||||||    
T  13012189 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagattcaaccaaaaagctcattaacacatttataaaaagaaaaatttgggcaa 13012288  T
Q  833 tctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgac 888  Q
    | |||||||| ||||||| |||||||||| |||||||||||| |||||||||||||    
T  13012289 tttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgac 13012344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 733 - 888
Target Start/End: Complemental strand, 26439445 - 26439290
Alignment:
Q  733 gcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaa 832  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||| ||||||||||||| ||||||||||||||||||||    
T  26439445 gcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttgggcaa 26439346  T
Q  833 tctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgac 888  Q
    |||||||||| ||||||| |||||||||| | ||||||||||  ||||||||||||    
T  26439345 tctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgac 26439290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 733 - 888
Target Start/End: Complemental strand, 34407450 - 34407295
Alignment:
Q  733 gcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaa 832  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||| ||||||||||||| ||||||||||||||||||||    
T  34407450 gcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttgggcaa 34407351  T
Q  833 tctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgac 888  Q
    |||||||||| ||||||| |||||||||| | ||||||||||  ||||||||||||    
T  34407350 tctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgac 34407295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 733 - 888
Target Start/End: Original strand, 47500774 - 47500929
Alignment:
Q  733 gcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaa 832  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||  |||||||||||||  |||||||||||||||||||    
T  47500774 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttatgaaaagaaaaatttgggcaa 47500873  T
Q  833 tctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgac 888  Q
    | |||||||| ||||||| |||||||||| |||||||||||| |||||||||||||    
T  47500874 tttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgac 47500929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 742 - 891
Target Start/End: Complemental strand, 29319862 - 29319713
Alignment:
Q  742 ggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaat 841  Q
    |||||||| || |||||||||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||||||||||||| |||||||||||||    
T  29319862 ggcggtcgtccaggctcgatcgataatttttgcacattagactcaacccaaaatcccattaacacatttacaaaaagaaaaatttgagcaatctgaaaat 29319763  T
Q  842 tctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    | |||||| |||||| |||| |||||||||||||||||||||||||||||    
T  29319762 tgtcacacacaaataagtcttggaattttatttagcacactattgacggg 29319713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 715 - 890
Target Start/End: Complemental strand, 29996167 - 29995992
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaa 814  Q
    |||||||||||| || || ||| || || |||||| |||| |||||||||||||||||| ||||||||| ||||| ||||| | |||||||||||||| |    
T  29996167 gggcggtttcaccgcccgacgatcccggacggtcgtccggactcgatcgataatttttgtacattagactcaaccaaaaagtccattaacacatttacga 29996068  T
Q  815 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgg 890  Q
    ||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||| ||||||||||||||||    
T  29996067 aaagaaaaatttgggcaatctgaaaattcttgcacgcaaatagttctcggaattttattaagcacactattgacgg 29995992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 732 - 891
Target Start/End: Original strand, 40529013 - 40529174
Alignment:
Q  732 ggcgaccctgggcg--gtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttggg 829  Q
    ||||||||||||||  |||| |||| ||||||||||||||||||||||||| || |||||||||| |  ||||||||||||||||||||||||||||||     
T  40529013 ggcgaccctgggcgaggtcgtccggactcgatcgataatttttgcacattaaactcaacctaaaaactcattaacacatttacaaaaagaaaaatttgga 40529112  T
Q  830 caatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    |||| |||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||    
T  40529113 caatttgaaaattgtcacatgcaaataggtcttggaattttatttagcacactattgacggg 40529174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 732 - 887
Target Start/End: Complemental strand, 17511400 - 17511245
Alignment:
Q  732 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggca 831  Q
    ||||||||||| ||||||||| | |||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||    
T  17511400 ggcgaccctgg-cggtcgcccagactcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 17511302  T
Q  832 atctgaaaattctcacacgcaaataggtctcgg-aattttatttagcacactattga 887  Q
    || |||||||| | |||||||||||||||| || |||||||||||||||| ||||||    
T  17511301 atttgaaaattgttacacgcaaataggtcttggaaattttatttagcacattattga 17511245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 743 - 887
Target Start/End: Complemental strand, 28877406 - 28877262
Alignment:
Q  743 gcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaatt 842  Q
    ||||||||  ||||| ||||||||||||||||||||||||  |||||||||||| |||||||||  ||| ||||||||||||||||| ||||| ||||||    
T  28877406 gcggtcgcttgggctagatcgataatttttgcacattagattcaacctaaaagctaattaacacgcttataaaaagaaaaatttgggaaatctaaaaatt 28877307  T
Q  843 ctcacacgcaaataggtctcggaattttatttagcacactattga 887  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  28877306 ctcacacgcaaataggtctcggaattttatttagcacactattga 28877262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 756 - 887
Target Start/End: Original strand, 35545977 - 35546108
Alignment:
Q  756 ctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaat 855  Q
    ||||||||| ||||||||| ||| |||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  35545977 ctcgatcgacaatttttgcgcatcagacccaacccaaaagccaattaacacacttacaaaaagaaaattttgggcaatctgaaaattctcacacgcaaat 35546076  T
Q  856 aggtctcggaattttatttagcacactattga 887  Q
     |||||| ||||||||||||||||||||||||    
T  35546077 gggtctctgaattttatttagcacactattga 35546108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 733 - 888
Target Start/End: Original strand, 43355905 - 43356060
Alignment:
Q  733 gcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaa 832  Q
    |||||||  ||| |||||||||||||| ||||||||||||||||||||||| ||||| ||||||| ||||||||||||| ||||||||||||||||||||    
T  43355905 gcgaccccaggcagtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttgggcaa 43356004  T
Q  833 tctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgac 888  Q
    |||||||||| ||||||| |||||||||| | ||||||||||  ||||||||||||    
T  43356005 tctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgac 43356060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 715 - 883
Target Start/End: Complemental strand, 30077814 - 30077647
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaa 814  Q
    |||||||||||| || || |||||  |||||||||||| ||||| |||||||| ||||||||||||||||||||| |||||   ||||||||||||||||    
T  30077814 gggcggtttcaccgcccg-cgacctcgggcggtcgcccaggctcaatcgataaattttgcacattagacccaaccaaaaagttcattaacacatttacaa 30077716  T
Q  815 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacta 883  Q
    |||||||||||||| ||||||||||||| | |||| ||||||||||| | |||||||||||||||||||    
T  30077715 aaagaaaaatttggacaatctgaaaatttttacacacaaataggtcttgaaattttatttagcacacta 30077647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 715 - 886
Target Start/End: Original strand, 26448036 - 26448206
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaa 814  Q
    |||||||||||| || ||||||| | | ||| ||| |||| ||||||||||||||||||||||||| | | |||| ||||| | ||||||||| ||||||    
T  26448036 gggcggtttcaccgcccggcgactccgtgcgatcgtccggactcgatcgataatttttgcacattaaatctaacccaaaagtccattaacacacttacaa 26448135  T
Q  815 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattg 886  Q
    ||| |||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||    
T  26448136 aaa-aaaaatttgggcaatctgaaaattctcatacacaaataggtttcggaattttatttagcacactattg 26448206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 799 - 891
Target Start/End: Original strand, 6235587 - 6235679
Alignment:
Q  799 attaacacatttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  6235587 attaacacatttacaaaaagaaaaatttgggcaatttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacggg 6235679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 767 - 886
Target Start/End: Original strand, 1817752 - 1817871
Alignment:
Q  767 atttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaa 866  Q
    |||||||||||||||| |||| | ||||| | ||||| ||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  1817752 atttttgcacattagatccaatccaaaagtccattaatacatttataaaaagaaaaatttgggcaatctaaaaattcttacacgcaaataggtctcggaa 1817851  T
Q  867 ttttatttagcacactattg 886  Q
    ||||||||| ||||||||||    
T  1817852 ttttatttaacacactattg 1817871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 715 - 887
Target Start/End: Complemental strand, 13393054 - 13392893
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaa 814  Q
    |||||||||||| || | ||||||| || ||||||||||||||| |||||| | ||||||| |||| | ||||||||      ||||      | |||||    
T  13393054 gggcggtttcaccgcccagcgaccccggacggtcgcccgggctcaatcgatgacttttgcatattacatccaaccta------aatt-----gtatacaa 13392966  T
Q  815 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattga 887  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  13392965 aaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcgaaattttatttagcacactattga 13392893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 715 - 887
Target Start/End: Complemental strand, 13396193 - 13396032
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaa 814  Q
    |||||||||||| || | ||||||| || ||||||||||||||| |||||| | ||||||| |||| | ||||||||      ||||      | |||||    
T  13396193 gggcggtttcaccgcccagcgaccccggacggtcgcccgggctcaatcgatgacttttgcatattacatccaaccta------aatt-----gtatacaa 13396105  T
Q  815 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattga 887  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  13396104 aaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcgaaattttatttagcacactattga 13396032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 721 - 858
Target Start/End: Original strand, 30109945 - 30110084
Alignment:
Q  721 tttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaa 820  Q
    |||||| || || |||||| || ||||||||||| |||||||||||||||||||||||||||||||| |  |||| | ||||||||| ||||||||||||    
T  30109945 tttcaccgcccgacgaccccggacggtcgcccggactcgatcgataatttttgcacattagacccaaacccaaagaccattaacacacttacaaaaagaa 30110044  T
Q  821 aaatttgggc--aatctgaaaattctcacacgcaaatagg 858  Q
    |||||||| |  ||| |||||| |||||||||||||||||    
T  30110045 aaatttggacaaaatatgaaaaatctcacacgcaaatagg 30110084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 744 - 858
Target Start/End: Original strand, 48129978 - 48130087
Alignment:
Q  744 cggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattc 843  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||| ||||||  ||||||||| |||||||||||||||||||||     |||||| ||    
T  48129978 cggtcgaccgggctcgatcgataatttttgcatattagacccaacccaaaagctcattaacacacttacaaaaagaaaaatttggg-----tgaaaactc 48130072  T
Q  844 tcacacgcaaatagg 858  Q
    |||||||||||||||    
T  48130073 tcacacgcaaatagg 48130087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 732 - 817
Target Start/End: Original strand, 27363361 - 27363446
Alignment:
Q  732 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaa 817  Q
    |||||||  ||||||||||||||||||||||||   |||||||| ||||| ||||||| ||||||| ||||||||| |||||||||    
T  27363361 ggcgacctcgggcggtcgcccgggctcgatcgaatttttttgcatattaggcccaacccaaaagcccattaacacacttacaaaaa 27363446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 757 - 825
Target Start/End: Original strand, 6254569 - 6254637
Alignment:
Q  757 tcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatt 825  Q
    |||||||||||||||||||||||| |||||||| ||||| ||||||||||| || |||||| |||||||    
T  6254569 tcgatcgataatttttgcacattaaacccaacccaaaagacaattaacacacttgcaaaaaaaaaaatt 6254637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 715 - 769
Target Start/End: Complemental strand, 49908836 - 49908782
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatt 769  Q
    |||||||||||| || ||||||||| |||||||||||||||||||||||||||||    
T  49908836 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatt 49908782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 712 - 773
Target Start/End: Original strand, 7769308 - 7769369
Alignment:
Q  712 catgggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttg 773  Q
    ||||||||||||||| |  |||||||||  ||||||||||||||||||||||||||||||||    
T  7769308 catgggcggtttcaccgtccggcgaccccaggcggtcgcccgggctcgatcgataatttttg 7769369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 715 - 832
Target Start/End: Original strand, 45194159 - 45194276
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaa 814  Q
    |||| ||||||| || || ||||||  |||| | |||||| ||||||| ||||||||||||||||| || ||||| ||||| | ||||||||| ||||||    
T  45194159 gggcagtttcaccgcccgacgaccccaggcgattgcccggactcgatcaataatttttgcacattaaactcaacccaaaagtccattaacacacttacaa 45194258  T
Q  815 aaagaaaaatttgggcaa 832  Q
    ||| ||||  ||||||||    
T  45194259 aaaaaaaatattgggcaa 45194276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 715 - 769
Target Start/End: Complemental strand, 5517548 - 5517494
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatt 769  Q
    |||||||||||| || ||||||||| ||||||||||| |||||||||||||||||    
T  5517548 gggcggtttcaccgcccggcgaccccgggcggtcgcctgggctcgatcgataatt 5517494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 715 - 768
Target Start/End: Complemental strand, 6212082 - 6212029
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataat 768  Q
    |||||||||||| |  ||||||||  ||||||||||||| ||||||||||||||    
T  6212082 gggcggtttcaccgtccggcgacctcgggcggtcgcccgagctcgatcgataat 6212029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 715 - 768
Target Start/End: Original strand, 17554979 - 17555032
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataat 768  Q
    |||||||||||| |  || |||||| ||| ||||||||||||||||||||||||    
T  17554979 gggcggtttcaccgtccgacgaccccgggtggtcgcccgggctcgatcgataat 17555032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 716 - 769
Target Start/End: Complemental strand, 50720529 - 50720476
Alignment:
Q  716 ggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatt 769  Q
    ||||||||||| || ||||||||  |||||||||||||||||| ||| ||||||    
T  50720529 ggcggtttcaccgcccggcgacctcgggcggtcgcccgggctcaatcaataatt 50720476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 145; Significance: 8e-76; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 145; E-Value: 8e-76
Query Start/End: Original strand, 715 - 891
Target Start/End: Original strand, 45418566 - 45418742
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaa 814  Q
    |||||||||||| || ||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||| ||||||    
T  45418566 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagatccaacccaaaagccaattaacacacttacaa 45418665  T
Q  815 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  45418666 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctctgaattttatttagcacactattgacggg 45418742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 130; E-Value: 7e-67
Query Start/End: Original strand, 715 - 891
Target Start/End: Original strand, 8147334 - 8147511
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaa 814  Q
    |||||||||||| || ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||  ||||| ||||||||||| ||||||    
T  8147334 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatctttgcacattagacccaactcaaaagtcaattaacacacttacaa 8147433  T
Q  815 aaagaaaaatttgggcaatctg-aaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  8147434 aaagaaaaatttgggcaatctgaaaaattctcacacgcaaatagatctcggaattttatttaacacactattgacggg 8147511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 741 - 891
Target Start/End: Original strand, 771008 - 771158
Alignment:
Q  741 gggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 840  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  771008 gggcggtcgcccgggctcgatcgataacttttgcacattagacccaaccaaaaagcccattaacacacttacaaaaagaaaaatttgggcaatctgaaaa 771107  T
Q  841 ttctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  771108 ttctcacacgcaaataggtctcggaactttatttagcacattattgacggg 771158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 732 - 890
Target Start/End: Original strand, 42439986 - 42440144
Alignment:
Q  732 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggca 831  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||  |||| ||||||| |||||||||||||||||||||||||||||||||    
T  42439986 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactaaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 42440085  T
Q  832 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgg 890  Q
    ||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||    
T  42440086 atctgaaaattgtcacacgcaaataggtcttgcaattttatttagcacactattgacgg 42440144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 735 - 888
Target Start/End: Complemental strand, 41251798 - 41251645
Alignment:
Q  735 gaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaatc 834  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  41251798 gaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatc 41251699  T
Q  835 tgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgac 888  Q
    |||||||| ||||||| |||||||||| ||||||||||||||||||||||||||    
T  41251698 tgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 41251645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 715 - 891
Target Start/End: Complemental strand, 44084787 - 44084611
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaa 814  Q
    |||||||||||| || ||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||| | |||||   ||||||||| ||||||    
T  44084787 gggcggtttcaccgcccggcgaccccgggcagtcgcccgggctcgatcgataatttttgcacattaaacccaatccaaaagttcattaacacacttacaa 44084688  T
Q  815 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  44084687 aaagaaaaatttgggcaatctgaaaattctcatacgcaaataggtctcagaattttatttagcacactattgacggg 44084611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 750 - 891
Target Start/End: Complemental strand, 12756986 - 12756845
Alignment:
Q  750 cccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattctcacac 849  Q
    |||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  12756986 cccgggttcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacac 12756887  T
Q  850 gcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  12756886 gcaaataagtctcggaattttatttagcacactattgacggg 12756845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 732 - 891
Target Start/End: Original strand, 35962715 - 35962874
Alignment:
Q  732 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggca 831  Q
    ||||||||  |||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||  |||||||||||||||||||||||| ||||||||    
T  35962715 ggcgaccccaggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcttattaacacatttacaaaaagaaaattttgggca 35962814  T
Q  832 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    ||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||    
T  35962815 atctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacggg 35962874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 735 - 891
Target Start/End: Original strand, 16405603 - 16405759
Alignment:
Q  735 gaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaatc 834  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||| ||||| ||||||  ||||||||||||| |||||||||||||||| |||||    
T  16405603 gaccctgggcggtcgcccgggctcaatcgataatttttgcacgttagactcaacccaaaagctcattaacacatttataaaaagaaaaatttggacaatc 16405702  T
Q  835 tgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    |||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||    
T  16405703 tgaaaattgtcacacgcaaataagtcttggaattttatttagcacactattgacggg 16405759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 733 - 888
Target Start/End: Complemental strand, 6403970 - 6403815
Alignment:
Q  733 gcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaa 832  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||   ||||||||||||| ||||||||||||||||||||    
T  6403970 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagttcattaacacatttataaaaagaaaaatttgggcaa 6403871  T
Q  833 tctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgac 888  Q
    |||||||||| ||||||| |||||||||| |||||||||||| |||||||||||||    
T  6403870 tctgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgac 6403815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 732 - 891
Target Start/End: Complemental strand, 31581789 - 31581630
Alignment:
Q  732 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggca 831  Q
    |||||||  |||||||||||| ||||||| ||||| |||||||| ||||||| || || ||||||| |||||||||||||||||||||||||||||||||    
T  31581789 ggcgaccacgggcggtcgcccaggctcgagcgatactttttgcatattagactcatcccaaaagcccattaacacatttacaaaaagaaaaatttgggca 31581690  T
Q  832 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  31581689 atctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacggg 31581630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 732 - 891
Target Start/End: Complemental strand, 32127308 - 32127149
Alignment:
Q  732 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggca 831  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||| || | ||| ||||||  |||||||||||||||||||||||||||| ||||    
T  32127308 ggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattaaactcgacccaaaagctcattaacacatttacaaaaagaaaaatttaggca 32127209  T
Q  832 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    ||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||    
T  32127208 atctgaaaattgtcacacgcaaatagatcttggaattttatttagcacactattgacggg 32127149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 732 - 888
Target Start/End: Complemental strand, 17445206 - 17445052
Alignment:
Q  732 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggca 831  Q
    |||||||  ||||||||||||| ||||||||||||||||||||||  ||||| ||||| ||||||| |||||||||||||||||||||||||||||||||    
T  17445206 ggcgacctcgggcggtcgcccgagctcgatcgataatttttgcac--tagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 17445109  T
Q  832 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgac 888  Q
    ||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||    
T  17445108 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 17445052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 715 - 891
Target Start/End: Complemental strand, 8059517 - 8059341
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaa 814  Q
    |||||||||||| || || |||||| || || |||||| ||||| |||||||||||||||||||||||  ||||| ||||||||||||||||| ||||||    
T  8059517 gggcggtttcaccgcccgacgaccccggccgatcgcccaggctcaatcgataatttttgcacattagagtcaacccaaaagccaattaacacacttacaa 8059418  T
Q  815 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    |||||||||||||| |||| ||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||    
T  8059417 aaagaaaaatttggccaatttgaaaattctcacacacaaatcggtctcggaattttatttagcacacaattgacggg 8059341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 732 - 891
Target Start/End: Original strand, 18981617 - 18981775
Alignment:
Q  732 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggca 831  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||||||||||| ||||| ||||| | ||||| |||||||||||||||||||||||||||    
T  18981617 ggcgaccc-gggcggtcgtccgggctcgattgataatttttgcacattagactcaacccaaaagtccattaaaacatttacaaaaagaaaaatttgggca 18981715  T
Q  832 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    || | |||||| |||||||||||||||||| |||||||||||||||||||| ||||||||    
T  18981716 atttaaaaattgtcacacgcaaataggtcttggaattttatttagcacactgttgacggg 18981775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 732 - 869
Target Start/End: Complemental strand, 2958267 - 2958131
Alignment:
Q  732 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggca 831  Q
    |||||||| ||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||||| ||||||||||||||||| ||||||||||||| |    
T  2958267 ggcgaccccgggcggtcgtccgggctcgatcgataatttt-gcacattagactcaacccaaaagcccattaacacatttacaaagagaaaaatttgggta 2958169  T
Q  832 atctgaaaattctcacacgcaaataggtctcggaattt 869  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  2958168 atctgaaaattgtcacacgcaaataggtcttggaattt 2958131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 757 - 889
Target Start/End: Original strand, 2285887 - 2286019
Alignment:
Q  757 tcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaata 856  Q
    |||||||||||||||||||||||| | |||||| ||||| | |||||||||||||| ||| |||||||||| |||||||||||||| |||||||||||||    
T  2285887 tcgatcgataatttttgcacattaaatccaaccaaaaagtctattaacacatttacgaaaggaaaaatttgagcaatctgaaaattgtcacacgcaaata 2285986  T
Q  857 ggtctcggaattttatttagcacactattgacg 889  Q
    ||| | |||||||||||||||||||||||||||    
T  2285987 ggttttggaattttatttagcacactattgacg 2286019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 751 - 891
Target Start/End: Complemental strand, 26162847 - 26162710
Alignment:
Q  751 ccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattctcacacg 850  Q
    ||||||||  |||||||||||| ||||||| |  ||||| |||| || ||||||||| ||||||||||||||||||||||||||| |||||||||| ||     
T  26162847 ccgggctccttcgataatttttacacattaaattcaacccaaaaacccattaacacacttacaaaaagaaaaatttgggcaatctaaaaattctcaaaca 26162748  T
Q  851 caaataggtctcggaattttatttagcacactattgacggg 891  Q
    |||||||||||||||   |||||||||||| ||||||||||    
T  26162747 caaataggtctcgga---ttatttagcacattattgacggg 26162710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 731 - 846
Target Start/End: Original strand, 26237956 - 26238071
Alignment:
Q  731 cggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggc 830  Q
    ||||||||| |||||||||||||||||||||||||| |||||||| ||||||  ||| | ||||| | ||||||||| ||||||||||||||||||||||    
T  26237956 cggcgaccccgggcggtcgcccgggctcgatcgata-tttttgcaaattagatgcaaaccaaaagtccattaacacacttacaaaaagaaaaatttgggc 26238054  T
Q  831 -aatctgaaaattctca 846  Q
     |||||||||| |||||    
T  26238055 aaatctgaaaactctca 26238071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 756 - 858
Target Start/End: Complemental strand, 4555354 - 4555250
Alignment:
Q  756 ctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggc--aatctgaaaattctcacacgcaa 853  Q
    ||||||||||||||||||||||| | |||||||| ||||||   |||||||| |||||||||||||| |||||||  |||||||||||||||||||| ||    
T  4555354 ctcgatcgataatttttgcacatcaaacccaacccaaaagctcgttaacacacttacaaaaagaaaattttgggcaaaatctgaaaattctcacacgtaa 4555255  T
Q  854 atagg 858  Q
    |||||    
T  4555254 atagg 4555250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 741 - 858
Target Start/End: Complemental strand, 7072710 - 7072589
Alignment:
Q  741 gggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaatta--acacatttacaaaaagaaaaatttgggcaa--tctg 836  Q
    ||||||||||||||||||||||||||||||||  |||||| || ||||| ||||||| ||||  ||||| ||| ||||||||||  |||| |||  ||||    
T  7072710 gggcggtcgcccgggctcgatcgataatttttttacattaaactcaacccaaaagcccattaacacacacttataaaaagaaaatattggacaaattctg 7072611  T
Q  837 aaaattctcacacgcaaatagg 858  Q
    ||||||||| |||| |||||||    
T  7072610 aaaattctcgcacgtaaatagg 7072589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 752 - 807
Target Start/End: Original strand, 34905969 - 34906024
Alignment:
Q  752 cgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacaca 807  Q
    |||||||||||||||||||||||||||||  || |||| ||||||| |||||||||    
T  34905969 cgggctcgatcgataatttttgcacattaagcctaacccaaaagcccattaacaca 34906024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 715 - 788
Target Start/End: Original strand, 34523223 - 34523296
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaac 788  Q
    ||||||||| || || ||||||||| ||||||||||||||||||||||  ||||||   |||||||| ||||||    
T  34523223 gggcggttttaccgcccggcgaccccgggcggtcgcccgggctcgatccgtaatttcctcacattaggcccaac 34523296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 138; Significance: 1e-71; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 715 - 888
Target Start/End: Original strand, 23402091 - 23402264
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaa 814  Q
    |||||||||||| || ||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||| ||||||    
T  23402091 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacacacttacaa 23402190  T
Q  815 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgac 888  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  23402191 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcgaaattttatttaacacactattgac 23402264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 718 - 891
Target Start/End: Complemental strand, 16788206 - 16788033
Alignment:
Q  718 cggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaa 817  Q
    |||||||| ||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||    
T  16788206 cggtttcattgcccggcaaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaa 16788107  T
Q  818 gaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    |||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  16788106 gaaaaatttgggcaatcttaaaactctcacacgcaaataggtcttggaattttatttagcacactattgacggg 16788033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 712 - 887
Target Start/End: Original strand, 4403988 - 4404163
Alignment:
Q  712 catgggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacattta 811  Q
    ||||| |||||||||||  |||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| | |||    
T  4403988 catggacggtttcactggccggcgaccccaggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacatactta 4404087  T
Q  812 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattga 887  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4404088 caaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 4404163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 732 - 887
Target Start/End: Complemental strand, 34136992 - 34136837
Alignment:
Q  732 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggca 831  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||| |||||||||||||||||||||||    
T  34136992 ggcgaccccgagcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggca 34136893  T
Q  832 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattga 887  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  34136892 atctgaaaattctcacacgcaaataggtctcgaaattttatttagcacacaattga 34136837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 732 - 891
Target Start/End: Original strand, 15838286 - 15838444
Alignment:
Q  732 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggca 831  Q
    |||||||| |||||||| |||||||||||| |||||||||||||||||| || ||||| ||||| | |||||||||||||||||| ||||||||||||||    
T  15838286 ggcgaccccgggcggtcacccgggctcgattgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaa-gaaaaatttgggca 15838384  T
Q  832 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  15838385 atctgaaaattttcacacgcaaataggtcttggaattttatttagcacactattgacggg 15838444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 732 - 891
Target Start/End: Complemental strand, 29728553 - 29728394
Alignment:
Q  732 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggca 831  Q
    |||||||| || |||||||||| ||||||||||||| ||||||||||||||| ||||| ||||||  |||||||||||||||||||||||||||||||||    
T  29728553 ggcgaccccggacggtcgcccgtgctcgatcgataaattttgcacattagactcaacccaaaagctcattaacacatttacaaaaagaaaaatttgggca 29728454  T
Q  832 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    ||||||||||| | ||||||||||||||||  ||||||||||||||||||||||||||||    
T  29728453 atctgaaaattgtgacacgcaaataggtcttcgaattttatttagcacactattgacggg 29728394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 746 - 891
Target Start/End: Complemental strand, 3648947 - 3648802
Alignment:
Q  746 gtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattctc 845  Q
    ||||||||||||||||||||||||||| |||||||||| ||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||    
T  3648947 gtcgcccgggctcgatcgataattttttcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaattttgggcaatctgaaaattgtc 3648848  T
Q  846 acacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    |||||||| ||||| | |||||||||||||||||||||||||||||    
T  3648847 acacgcaagtaggttttggaattttatttagcacactattgacggg 3648802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 719 - 886
Target Start/End: Original strand, 36408538 - 36408705
Alignment:
Q  719 ggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaag 818  Q
    |||||||| || ||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | ||||||||||||||||||||    
T  36408538 ggtttcaccgcccggcgacctcgggcggtcgcccgggctcgatcgataatttttgcacattagatccaacccaaaagtccattaacacatttacaaaaag 36408637  T
Q  819 aaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattg 886  Q
    |||| ||| |||||| |||||||||| |||||| |||||||||| |||||||||||| ||||||||||    
T  36408638 aaaatttttggcaatttgaaaattcttacacgctaataggtctcagaattttatttaacacactattg 36408705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 754 - 886
Target Start/End: Original strand, 9877242 - 9877374
Alignment:
Q  754 ggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaa 853  Q
    |||||||| |||||||||||||||||||||| |||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  9877242 ggctcgattgataatttttgcacattagacctaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacatgcaa 9877341  T
Q  854 ataggtctcggaattttatttagcacactattg 886  Q
    |||||||||| ||||||||||||||||||||||    
T  9877342 ataggtctcgaaattttatttagcacactattg 9877374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 733 - 888
Target Start/End: Original strand, 39914516 - 39914670
Alignment:
Q  733 gcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaa 832  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||  ||||||||||||| ||||| ||||||||||||||    
T  39914516 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaa-aaaaatttgggcaa 39914614  T
Q  833 tctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgac 888  Q
    | |||||||| ||||| | |||||||||| |||||||||||| |||||||||||||    
T  39914615 tttgaaaattgtcacaagtaaataggtcttggaattttatttggcacactattgac 39914670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 715 - 887
Target Start/End: Complemental strand, 2729380 - 2729208
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaa 814  Q
    |||||||||||| || ||||||||| |||||| ||||||||||||||||||||||||| ||||||| | |||| | ||||||| ||||||||| ||| ||    
T  2729380 gggcggtttcaccgcccggcgaccccgggcggacgcccgggctcgatcgataatttttacacattaaatccaatccaaaagcccattaacacacttataa 2729281  T
Q  815 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattga 887  Q
    |||||||  ||| |||||| |||||| ||||| |||||||||||||||  |||||||||||||||||||||||    
T  2729280 aaagaaattttttggcaatttgaaaactctcatacgcaaataggtctcaaaattttatttagcacactattga 2729208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 748 - 858
Target Start/End: Original strand, 3435285 - 3435397
Alignment:
Q  748 cgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggc--aatctgaaaattctc 845  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||| || ||||||||| ||||||||||||||||||||||  |||||||||||||||    
T  3435285 cgcccgggcttgatcgataatttttgcacattagacccaacccaaaaacccattaacacacttacaaaaagaaaaatttgggcaaaatctgaaaattctc 3435384  T
Q  846 acacgcaaatagg 858  Q
    | |||||||||||    
T  3435385 aaacgcaaatagg 3435397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 764 - 890
Target Start/End: Original strand, 42230971 - 42231095
Alignment:
Q  764 ataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcg 863  Q
    ||||||||||||||||| | |||||  ||||| | ||||||||  ||||||||||||||||||||||||| |||||||||||| | |||||||||||||     
T  42230971 ataatttttgcacattaaatccaactcaaaagtccattaacac--ttacaaaaagaaaaatttgggcaatttgaaaattctcatatgcaaataggtctca 42231068  T
Q  864 gaattttatttagcacactattgacgg 890  Q
    |||||||||||||||||||||||||||    
T  42231069 gaattttatttagcacactattgacgg 42231095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 755 - 825
Target Start/End: Complemental strand, 40470637 - 40470567
Alignment:
Q  755 gctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatt 825  Q
    |||||||||||||||||||||||||||||||||   ||||| | ||||||||| ||| ||||| |||||||    
T  40470637 gctcgatcgataatttttgcacattagacccaaatcaaaagtccattaacacacttataaaaaaaaaaatt 40470567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 708 - 768
Target Start/End: Original strand, 34844739 - 34844799
Alignment:
Q  708 aaagcatgggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataat 768  Q
    |||| |||||||||||  | ||||||||||||| |||||||||| ||||||||||||||||    
T  34844739 aaagtatgggcggttttgccgctcggcgaccctaggcggtcgcctgggctcgatcgataat 34844799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 747 - 817
Target Start/End: Complemental strand, 10397192 - 10397122
Alignment:
Q  747 tcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaa 817  Q
    |||||||||||| ||||||||||| | ||||||||   ||||| ||||||| ||||||||| ||| |||||    
T  10397192 tcgcccgggctcaatcgataatttcttcacattaggttcaacccaaaagccgattaacacagttaaaaaaa 10397122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 136; Significance: 2e-70; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 732 - 891
Target Start/End: Original strand, 5230 - 5389
Alignment:
Q  732 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggca 831  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||    
T  5230 ggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattagacccaatctaaaagccaattaacacacttacaaaaagaaaattttgggca 5329  T
Q  832 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  5330 atctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacggg 5389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 131; Significance: 2e-67; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 711 - 889
Target Start/End: Original strand, 35907531 - 35907709
Alignment:
Q  711 gcatgggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacattt 810  Q
    |||||||||||||||| || ||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||  ||| ||    
T  35907531 gcatgggcggtttcaccgcccggcgacctcgggcggtcgcccgggcttgatcgataatttttgcacattagacccaacccaaaagccaattagtacactt 35907630  T
Q  811 acaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacg 889  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  35907631 acaaaaagaaaattttgggtaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacg 35907709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 715 - 891
Target Start/End: Original strand, 17445296 - 17445472
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaa 814  Q
    ||||||||||| ||| |||||||||   ||||||||||||||| |||| |||||||||| |||||||| |||||| ||||| ||||||||||| ||||||    
T  17445296 gggcggtttcattgcccggcgaccccatgcggtcgcccgggctggatcaataatttttgtacattagatccaacccaaaagtcaattaacacacttacaa 17445395  T
Q  815 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17445396 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacggg 17445472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 732 - 888
Target Start/End: Complemental strand, 32982223 - 32982067
Alignment:
Q  732 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggca 831  Q
    |||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||    
T  32982223 ggcgaccccgggcggtcgcgcgggcccgatcgataatttttgcacattagacccaacctaaaagcccattaacatatttacaaaaagaaaaatttggaca 32982124  T
Q  832 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgac 888  Q
    ||||||||||| |||||| ||||||||||| ||||||||||||||||| ||||||||    
T  32982123 atctgaaaattgtcacacacaaataggtcttggaattttatttagcactctattgac 32982067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 733 - 888
Target Start/End: Original strand, 26144256 - 26144411
Alignment:
Q  733 gcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaa 832  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||  ||||||||||||| ||||||||||||||||||||    
T  26144256 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaagaaaaatttgggcaa 26144355  T
Q  833 tctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgac 888  Q
    | |||||||| ||||||| |||||||||| |||||||||||| |||||||||||||    
T  26144356 tttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgac 26144411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 736 - 891
Target Start/End: Original strand, 7433449 - 7433604
Alignment:
Q  736 accctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaatct 835  Q
    |||| ||||||||||||| |||||||| |||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||| ||||||||||||    
T  7433449 accccgggcggtcgcccgagctcgatctataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaattttgggcaatct 7433548  T
Q  836 gaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
     |||||| |||||| ||||||||||| | |||||||||||||||||||||||||||    
T  7433549 aaaaattgtcacacacaaataggtcttgaaattttatttagcacactattgacggg 7433604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 747 - 891
Target Start/End: Complemental strand, 42311093 - 42310949
Alignment:
Q  747 tcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattctca 846  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||| |||    
T  42311093 tcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccgttaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtca 42310994  T
Q  847 cacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    |||||||||| |||| | |||||||||||| || |||||||||||    
T  42310993 cacgcaaataagtcttgaaattttatttagtacgctattgacggg 42310949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 741 - 891
Target Start/End: Complemental strand, 321535 - 321385
Alignment:
Q  741 gggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 840  Q
    ||||||||| |||||||||||||||||||||||  ||||||| |||||| ||||| | ||||||||| ||||||||||||||||||||||||||||||||    
T  321535 gggcggtcgtccgggctcgatcgataatttttgtgcattagatccaacccaaaagtccattaacacagttacaaaaagaaaaatttgggcaatctgaaaa 321436  T
Q  841 ttctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    |||||| | |||||||||||||||||||||||||| |||| ||||||||||    
T  321435 ttctcatatgcaaataggtctcggaattttatttaacacattattgacggg 321385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 715 - 891
Target Start/End: Original strand, 3828967 - 3829142
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaa 814  Q
    |||||||||||   | |||| |||| || ||||||| |||| |||||||||||||||||||||||| |||||||| |||||   ||||||||| ||||||    
T  3828967 gggcggtttcatcacccggcaaccccggacggtcgctcgggttcgatcgataatttttgcacattaaacccaacccaaaagttcattaacacacttacaa 3829066  T
Q  815 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 891  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||    
T  3829067 aaagaaaaatttgggcaatctgaaaattttcatacgcaaataggtct-ggaattttatttagcacactattgacggg 3829142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 733 - 858
Target Start/End: Complemental strand, 41972440 - 41972314
Alignment:
Q  733 gcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgg--gc 830  Q
    ||||||| ||||||||||| || ||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||        
T  41972440 gcgaccccgggcggtcgcctgg-ctcgatcgataatttttgcacattagatccaacctaaaagcctattaacacacttacaaaaagaaaaatttggaaaa 41972342  T
Q  831 aatctgaaaattctcacacgcaaatagg 858  Q
    ||||||||||||||||||||||||||||    
T  41972341 aatctgaaaattctcacacgcaaatagg 41972314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 715 - 858
Target Start/End: Original strand, 33489670 - 33489815
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaa 814  Q
    ||||||||||||  | ||||||||| || ||||||  |||| | | ||||||||||||| ||||||||| ||| ||||||||| ||||||||| |||| |    
T  33489670 gggcggtttcaccacccggcgaccccggacggtcgttcgggattgttcgataatttttgtacattagactcaaactaaaagcccattaacacacttacta 33489769  T
Q  815 aaagaaaaatttgggc--aatctgaaaattctcacacgcaaatagg 858  Q
    ||||||||||||| ||  ||||||||||||||||||||||||||||    
T  33489770 aaagaaaaatttgagcaaaatctgaaaattctcacacgcaaatagg 33489815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 741 - 838
Target Start/End: Original strand, 23313247 - 23313345
Alignment:
Q  741 gggcggtcgcccgggctcgatcgataattt-ttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaa 838  Q
    ||||||| ||||||||||||| ||| |||| ||||||||||||| |||| ||||||   ||||||||||||||||||||||||||||||||||||||||    
T  23313247 gggcggttgcccgggctcgattgatgatttgttgcacattagactcaacataaaagttcattaacacatttacaaaaagaaaaatttgggcaatctgaa 23313345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 715 - 769
Target Start/End: Original strand, 31866960 - 31867014
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatt 769  Q
    |||||||||||| || ||||||||| ||||||||||||||| |||| ||||||||    
T  31866960 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggttcgaccgataatt 31867014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 751 - 817
Target Start/End: Complemental strand, 35951493 - 35951427
Alignment:
Q  751 ccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaa 817  Q
    ||||||||||||||||||||||| |||||||  | |||| || |||| ||||||||| | |||||||    
T  35951493 ccgggctcgatcgataatttttgtacattaggtcgaacccaatagcccattaacacactaacaaaaa 35951427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 751 - 797
Target Start/End: Complemental strand, 48901253 - 48901207
Alignment:
Q  751 ccgggctcgatcgataatttttgcacattagacccaacctaaaagcc 797  Q
    ||||| |||||||||||||| |||||||||| ||||||| |||||||    
T  48901253 ccggggtcgatcgataatttatgcacattaggcccaacccaaaagcc 48901207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 731 - 768
Target Start/End: Complemental strand, 44352651 - 44352614
Alignment:
Q  731 cggcgaccctgggcggtcgcccgggctcgatcgataat 768  Q
    ||||||||| ||| ||||||||||||||||||||||||    
T  44352651 cggcgaccccgggaggtcgcccgggctcgatcgataat 44352614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 117; Significance: 4e-59; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 751 - 891
Target Start/End: Original strand, 52944 - 53084
Alignment:
Q  751 ccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattctcacacg 850  Q
    ||||||||||||||||||||||||||||||||   |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |    
T  52944 ccgggctcgatcgataatttttgcacattagatttaacccaaaagccaattaacacatttacaaaaagaaaaatttggacaatctgaaaattctcacatg 53043  T
Q  851 caaataggtctcggaattttatttagcacactattgacggg 891  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  53044 caaataggtctcggaattttatttagcacactattgacggg 53084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 114; Significance: 2e-57; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 715 - 888
Target Start/End: Original strand, 31463 - 31636
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaa 814  Q
    |||||||||||  || |||||||||  | |||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||| ||||||    
T  31463 gggcggtttcatcgcccggcgaccccagacggtcgcccgggctcgatcgataatttttgcacactagacccaacccaaaagcccattaacacacttacaa 31562  T
Q  815 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgac 888  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||| | |||||||||| |||||||||||||    
T  31563 aaagaaaaatttggacaatctgaaaattctcactcgcaaataggtctagtaattttattttgcacactattgac 31636  T

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Target: scaffold0002 (Bit Score: 112; Significance: 4e-56; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 733 - 888
Target Start/End: Complemental strand, 480623 - 480468
Alignment:
Q  733 gcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaa 832  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||  ||||||||||||| ||||||||||||||||||||    
T  480623 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaagaaaaatttgggcaa 480524  T
Q  833 tctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgac 888  Q
    | |||||||| ||||||| |||||||||| |||||||||||| |||||||||||||    
T  480523 tttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgac 480468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 109; Significance: 2e-54; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 732 - 888
Target Start/End: Original strand, 17842 - 17998
Alignment:
Q  732 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggca 831  Q
    |||||||| | ||| ||| ||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||    
T  17842 ggcgaccccgagcgatcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 17941  T
Q  832 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgac 888  Q
    ||||||||||| ||||| | |||||||||| | ||||||||||||||||||||||||    
T  17942 atctgaaaattgtcacatgtaaataggtcttgaaattttatttagcacactattgac 17998  T

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Target: scaffold2142 (Bit Score: 108; Significance: 9e-54; HSPs: 1)
Name: scaffold2142
Description:

Target: scaffold2142; HSP #1
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 741 - 888
Target Start/End: Original strand, 531 - 678
Alignment:
Q  741 gggcggtcgcccgggctcgatcgataatttttgcacattagacccaacctaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 840  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||  ||||||||||||| ||||||||||||||||||||| ||||||    
T  531 gggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaagaaaaatttgggcaatttgaaaa 630  T
Q  841 ttctcacacgcaaataggtctcggaattttatttagcacactattgac 888  Q
    || ||||||| |||||||||| |||||||||||| |||||||||||||    
T  631 ttgtcacacgtaaataggtcttggaattttatttggcacactattgac 678  T

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Target: scaffold0769 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0769
Description:

Target: scaffold0769; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 715 - 788
Target Start/End: Original strand, 1260 - 1333
Alignment:
Q  715 gggcggtttcactgctcggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaac 788  Q
    ||||||||| || || ||||||||| ||||||||||||||||||||||  ||||||   |||||||| ||||||    
T  1260 gggcggttttaccgcccggcgaccccgggcggtcgcccgggctcgatccgtaatttcctcacattaggcccaac 1333  T

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Target: scaffold0012 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 731 - 791
Target Start/End: Original strand, 194027 - 194087
Alignment:
Q  731 cggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattagacccaaccta 791  Q
    ||||||||| ||||||||||||||||||||||  ||||||   |||||||| |||||||||    
T  194027 cggcgaccccgggcggtcgcccgggctcgatccgtaatttcctcacattaggcccaaccta 194087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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