View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5722-Insertion-2 (Length: 1008)
Name: NF5722-Insertion-2
Description: NF5722
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5722-Insertion-2 |
 | |
|
| [»] chr3 (23 HSPs) |
| |
|
| [»] scaffold1215 (2 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 921; Significance: 0; HSPs: 23)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 921; E-Value: 0
Query Start/End: Original strand, 7 - 1008
Target Start/End: Complemental strand, 27633434 - 27632432
Alignment:
| Q |
7 |
acattctgatgctgattcattttaaacctaacagaagatacttcagtttcaaatcaagttgatccggatgaggttaatctattgattgtaaaatgtgatg |
106 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
27633434 |
acattctgatgctgattcattttaaacctaacagaagatacttcagtttcaaatcaagttgattcggatgaggttaatctattgattgtaaaatgtgatg |
27633335 |
T |
|
| Q |
107 |
catgtggttccgacattgaagtttcaattggccgtgaccgttcagtagattttgatgcatataatacggtatgatctcctgaattttataacttatgttt |
206 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
27633334 |
catgtggttccgacattgaagtttcaattggccgtgaccgttcagtagattatgatgcatataatacggtatgacctcctgaattttataacttatgttt |
27633235 |
T |
|
| Q |
207 |
agcagaacttatttctgaagtatttctttgagtttttgttagatttggtttcataatccgatatttcttgattgaatgataactggattattgacattgt |
306 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27633234 |
agcagaacttatttctgaagtatttctttgagtttttgttagatttggtttcatattccgatatttcttgattgaatgataactggattattgacattgt |
27633135 |
T |
|
| Q |
307 |
tataatctgtaaaaatgaatttccttgcttaatataggtattgtacttaaaatttctatatcagcttgatgtagtgcacttgttctgatcttaataaaaa |
406 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |||||||||||||||| |
|
|
| T |
27633134 |
tataatctgtaaaaatgaatgtccttgcttaatataggtattgta-ttaaaatttctatatcaggttgatgtagtgcacttgtcctgatcttaataaaaa |
27633036 |
T |
|
| Q |
407 |
gatgagcatgaagcaaccattttagtcaaaaactaaggaaaattgaaacaagacatttctaagcatttaacataggtattgtacttagttataattgaaa |
506 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27633035 |
gatgagcatgaagcaaccattttagtcaaaaactaaggaaaattgaaacaagacatttctaagcatttaacataggtattgtacttagttataattgaaa |
27632936 |
T |
|
| Q |
507 |
attggtatctgagtgactgcttcactgttcctatatcagatttgtcctgcgtgcaataaaggcttagggggaggatgcaatcaggatggtgcaaaactca |
606 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||| |
|
|
| T |
27632935 |
attggtatctgagtgactgcttcactgttcctatatcagatttgtgctgcgtgcaataaaggctta-ggggaggatgcaatcaggatggtgcagaactca |
27632837 |
T |
|
| Q |
607 |
atcttccaaatctcacaaaaggtatctgtaacttatcttgtgatttatgtgctttaattgtaaaattgcttagtttctgcatagaagtatttgattctta |
706 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27632836 |
atcttccaaatctcacaaaaggtatctgtaacttatcttgtgatttatgtgctttaattgtaaaattgcttagtttctgcatagaagtatttgattctta |
27632737 |
T |
|
| Q |
707 |
tataacccaattcattatgctgatataacgatgtatgctttctacataggggatttggaaccctcggagaaacggagtctcacatgttcattgggaattg |
806 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27632736 |
tataacccaattcattatgctgatataacgatgtatgctttctacataggggatttggaaccctcggagaaacggagtctcacatgttcattgggaattg |
27632637 |
T |
|
| Q |
807 |
catgacaagaaagatgcttcctgggaacccaac-aacatgaaccagtgcctgattcaatttcgccagcgtctagggacaatgtgtatcttccaagcttga |
905 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27632636 |
catgacaagaaagatgcttcctgggaacccaacaaacatgaaccagtgcctgattcaattttgccagcgtctagggacaatgtgtatcttccaagcttga |
27632537 |
T |
|
| Q |
906 |
atgatatgctctcagatgaagaagataccatcagcaatgcctcagatg-tgtcattgcagaagacacatccattcc-aaaaggtatgatccttcgcagtc |
1003 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||| |
|
|
| T |
27632536 |
atgatatgctctcagatgaagaagataccatcagcaatgcctcagatgttgtcattgcagaagacacatccattccaaaaaggtatgatcctttgcagtc |
27632437 |
T |
|
| Q |
1004 |
tatac |
1008 |
Q |
| |
|
||||| |
|
|
| T |
27632436 |
tatac |
27632432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 873; E-Value: 0
Query Start/End: Original strand, 7 - 1007
Target Start/End: Complemental strand, 34518216 - 34517225
Alignment:
| Q |
7 |
acattctgatgctgattcattttaaacctaacagaagatacttcagtttcaaatcaagttgatccggatgaggttaatctattgattgtaaaatgtgatg |
106 |
Q |
| |
|
|||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
34518216 |
acattctgatgctgattcatttgaa-cctaacagaagatacttcagttttaaatcaagttgatccggatgaggttaatctattgattgtaaaatgtcatg |
34518118 |
T |
|
| Q |
107 |
catgtggttccgacattgaagtttcaattggccgtgaccgttcagtagattttgatgcatataatacggtatgatctcctgaattttataacttatgttt |
206 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
34518117 |
catgtggttccgacattgaagtttcaattggccgtgaccgttcagtagattatgatgcatataatacggtatgacctcctgaattttataacttatgttt |
34518018 |
T |
|
| Q |
207 |
agcagaacttatttctgaagtatttctttgagtttttgttagatttggtttcataatccgatatttcttgattgaatgataactggattattgacattgt |
306 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
34518017 |
agcagaacttatttctgaagtatttctttgagtttttgttggatttggtttcatattccgatatttcttgattgaatgataactggattattgatattgt |
34517918 |
T |
|
| Q |
307 |
tataatctgtaaaaatgaatttccttgcttaatataggtattgtacttaaaatttctatatcagcttgatgtagtgcacttgttctgatcttaataaaaa |
406 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34517917 |
tataatctgtaaaaatgaatgtccttgcttaatataggtattgtacttaaaatttctatatcagcttgatgtagtgcacttgttctgatcttaataaaaa |
34517818 |
T |
|
| Q |
407 |
gatgagcatgaagcaaccattttagtcaaaaactaaggaaaattgaaacaagacatttctaagcatttaacataggtattgtacttagttataattgaaa |
506 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
34517817 |
gatgagcatgaagcaaccattttagtcaaaaactaaggaaaattgaaacaagacatttctaagcattt----------ttgtacttagttataattgaaa |
34517728 |
T |
|
| Q |
507 |
attggtatctgagtgactgcttcactgttcctatatcagatttgtcctgcgtgcaataaaggcttagggggaggatgcaatcaggatggtgcaaaactca |
606 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||| |
|
|
| T |
34517727 |
attggtatctgagtgactgcttcactgttcctatatcagatttgtcttgcgtgcaataaaggcttagggg-aggatgcaatcaggatggtgcagaactca |
34517629 |
T |
|
| Q |
607 |
atcttccaaatctcacaaaaggtatctgtaacttatcttgtgatttatgtgctttaattgtaaaattgcttagtttctgcatagaagtatttgattctta |
706 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34517628 |
atcttccaaatctcacaaaaggtatctgtaacttatcttgtgatttatgtgctttaattgtaaaattgcttagtttctgcatagaagtatttgattctta |
34517529 |
T |
|
| Q |
707 |
tataacccaattcattatgctgatataacgatgtatgctttctacataggggatttggaaccctcggagaaacggagtctcacatgttcattgggaattg |
806 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34517528 |
tataacccaattcattatgctgatataacgatgtatgctttctacataggggatttggaaccctcggagaaacggagtctcacatgttcattgggaattg |
34517429 |
T |
|
| Q |
807 |
catgacaagaaagatgcttcctgggaacccaac-aacatgaaccagtgcctgattcaatttcgccagcgtctagggacaatgtgtatcttccaagcttga |
905 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34517428 |
catgacaagaaagatgcttcctgggaacccaacaaacatgaaccagtgcctgattcaattttgccagcgtctagggacaatgtgtatcttccaagcttga |
34517329 |
T |
|
| Q |
906 |
atgatatgctctcagatgaagaagataccatcagcaatgcctcagatg-tgtcattgcagaagacacatccatt-ccaaaaggtatgatccttcgcagtc |
1003 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||| |||||| |
|
|
| T |
34517328 |
atgatatgctctcagatgaagaagataccatcagcaatgcctcagatgttgtcattgcagaagacacatccattgcaaaaaggtatgatcctttgcagtc |
34517229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 474; E-Value: 0
Query Start/End: Original strand, 7 - 1007
Target Start/End: Complemental strand, 27617843 - 27616853
Alignment:
| Q |
7 |
acattctgatgctgattcattttaaacctaacagaagatacttcagtttcaaatcaagttgatccggatgaggttaatctattgattgtaaaatgtgatg |
106 |
Q |
| |
|
|||||| ||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
27617843 |
acattcggattctgatccattttgaacctaacagaagatacttcagtttcaaatcaagttgatccggatgaggttaatctaatgattgtaaaatgtcttg |
27617744 |
T |
|
| Q |
107 |
catgtggttccgacattgaagtttcaattggccgtgaccgttcagtagattttgatgcatataatacggtatgatctcctgaattttataacttatgttt |
206 |
Q |
| |
|
||||| || | ||||||||||||||| | ||||||||||||| ||||||| |||||||||||||| || |||| |||||||||||||||| |||||||| |
|
|
| T |
27617743 |
tatgtgatttcaacattgaagtttcaactagccgtgaccgttcggtagattatgatgcatataatatggcatgacctcctgaattttataatttatgttt |
27617644 |
T |
|
| Q |
207 |
agcagaacttatttctgaagtatttctttgagtttttgttagatttggtttcataatccgatatttcttgattgaatgataactggattattgacattgt |
306 |
Q |
| |
|
|||||||||| || |||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||| ||| |||||||||||| |
|
|
| T |
27617643 |
agcagaacttgttactgaagtatttctttgggtttttgttagatttggttttcttttccgatatttcttgattgaatgataacgggactattgacattgt |
27617544 |
T |
|
| Q |
307 |
tataatctgtaaaaatgaatttccttgctta----atataggtattgtacttaaaatttctatatcagcttgatgtagtgcacttgttctgatcttaata |
402 |
Q |
| |
|
|||||| ||| | ||||||| |||||||||| || | |||| | ||||||| | | |||||||||| |||||||||||| |||||||| ||| |
|
|
| T |
27617543 |
tataatttgttataatgaatgtccttgcttagctgctaatgaaattgaaaagaaaatttatgtgtcagcttgatatagtgcacttgtcctgatcttgata |
27617444 |
T |
|
| Q |
403 |
aaaagatgagcatgaagcaaccattttagtcaaaaactaaggaaaattgaaacaagacatttctaagcatttaacataggtattgtacttagttataatt |
502 |
Q |
| |
|
||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| || |
|
|
| T |
27617443 |
aaaagatgagcatgaagtaaccatcttagtcaaaaactaaggaaaattgaaacaagacatttctaaatatttaacataggtattgtacttgattatattt |
27617344 |
T |
|
| Q |
503 |
gaaaattggtatctgagtgactgcttcactgttcctatatcagatttgtcctgcgtgcaataaaggcttagggggaggatgcaatcaggatggtgcaaaa |
602 |
Q |
| |
|
|||| ||| |||| | ||| |||||||||||||||||||||||||||||||| ||| || || ||||| |||||||||||||||||||||||| | || |
|
|
| T |
27617343 |
gaaatttgatatcgaaatgaatgcttcactgttcctatatcagatttgtcctgtgtgtgatgaaagctta-ggggaggatgcaatcaggatggtgaagaa |
27617245 |
T |
|
| Q |
603 |
ctcaatcttccaaatctcacaaaaggtatctgtaacttatcttgtgatttatgtgctttaattgtaaaattgcttagtttctgcatagaagtatttgatt |
702 |
Q |
| |
|
||||| ||||| ||||||||||||||| |||||||||||||||| ||||||| ||| ||||||||| ||||||||||||||| |
|
|
| T |
27617244 |
ctcaagcttcccaatctcacaaaaggt-------------------atttatgtgctttaatagtaaaatagctcagtttctgcgtagaagtatttgatt |
27617164 |
T |
|
| Q |
703 |
cttatataacccaattcattatgctgatataacgatgtatgctttctacataggggatttggaaccctcg---gagaaacggagtctcacatgttcattg |
799 |
Q |
| |
|
||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||| | |||||| |||||||| ||||||| |
|
|
| T |
27617163 |
cttatctaacccaatttattatgctgatataacgatgtatgctttctacatagtggatttggaagcctcgaaaaaaaaacggcatctcacatattcattg |
27617064 |
T |
|
| Q |
800 |
ggaattgcatgacaagaaagatgcttcctgggaacccaac-aacatgaaccagtgcctgattcaatttcgccagcgtctagggacaatgtgtatcttcca |
898 |
Q |
| |
|
| ||||||| | |||||||||||||||||||||| |||| |||| |||||| ||||||||||||||||||| |||| || ||||||||||||||||||| |
|
|
| T |
27617063 |
agcattgcatcataagaaagatgcttcctgggaacacaacaaacacgaaccaatgcctgattcaatttcgcctgcgtttaaggacaatgtgtatcttcca |
27616964 |
T |
|
| Q |
899 |
agcttgaatgatatgctctcagatgaagaagataccatcagcaatgcctcagatg-tgtcattgcagaagacacatccatt-ccaaaaggtatgatcctt |
996 |
Q |
| |
|
||||||||| |||| |||||||||||||||||||| ||||| ||||||||||||| |||| ||| | |||||||||||||| | |||||||||| ||||| |
|
|
| T |
27616963 |
agcttgaattatattctctcagatgaagaagatacaatcagaaatgcctcagatgttgtcgttgaaaaagacacatccattgcaaaaaggtatggtcctt |
27616864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 470; E-Value: 0
Query Start/End: Original strand, 7 - 1007
Target Start/End: Complemental strand, 34506628 - 34505638
Alignment:
| Q |
7 |
acattctgatgctgattcattttaaacctaacagaagatacttcagtttcaaatcaagttgatccggatgaggttaatctattgattgtaaaatgtgatg |
106 |
Q |
| |
|
|||||| ||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |
|
|
| T |
34506628 |
acattcggattctgatctattttgaacctaacagaagatacttcagtttcaaatcaagttgatccggatgaggttaatctaacgattgtaaaatgtcctg |
34506529 |
T |
|
| Q |
107 |
catgtggttccgacattgaagtttcaattggccgtgaccgttcagtagattttgatgcatataatacggtatgatctcctgaattttataacttatgttt |
206 |
Q |
| |
|
||||| || ||||||||||||||||| | ||||||||||||| ||||||| |||||||||||||| || |||| ||||||| |||||||| |||||||| |
|
|
| T |
34506528 |
tatgtgatttcgacattgaagtttcaactagccgtgaccgttcggtagattatgatgcatataatatggcatgacctcctgagttttataatttatgttt |
34506429 |
T |
|
| Q |
207 |
agcagaacttatttctgaagtatttctttgagtttttgttagatttggtttcataatccgatatttcttgattgaatgataactggattattgacattgt |
306 |
Q |
| |
|
|||||||||| || ||||||||||| |||| |||||||||||||||||||| | |||||||||||||||||||||||||| ||| |||||||||||| |
|
|
| T |
34506428 |
agcagaacttgttactgaagtatttatttgggtttttgttagatttggttttcttttccgatatttcttgattgaatgataatgggactattgacattgt |
34506329 |
T |
|
| Q |
307 |
tataatctgtaaaaatgaatttccttgctta----atataggtattgtacttaaaatttctatatcagcttgatgtagtgcacttgttctgatcttaata |
402 |
Q |
| |
|
|||||| ||| ||||||||| |||||||||| || | |||| | ||||||||| | |||| ||||| |||||||||||| |||||||| ||| |
|
|
| T |
34506328 |
tataatttgttaaaatgaatgtccttgcttagctgctaatgaaattgaaaagaaaatttctgtgtcagtttgatatagtgcacttgtcctgatcttgata |
34506229 |
T |
|
| Q |
403 |
aaaagatgagcatgaagcaaccattttagtcaaaaactaaggaaaattgaaacaagacatttctaagcatttaacataggtattgtacttagttataatt |
502 |
Q |
| |
|
||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| || |
|
|
| T |
34506228 |
aaaagatgagcatgaagtaaccatcttagtcaaaaactaaggaaaattgaaacaagacatttctaaatatttaacataggtattgtacttgattatattt |
34506129 |
T |
|
| Q |
503 |
gaaaattggtatctgagtgactgcttcactgttcctatatcagatttgtcctgcgtgcaataaaggcttagggggaggatgcaatcaggatggtgcaaaa |
602 |
Q |
| |
|
|||| ||| |||| | ||| |||||||||||||||||||||||||||||||| ||| || || ||||| |||||||||||||||||||||||| | || |
|
|
| T |
34506128 |
gaaatttgatatcgaaatgaatgcttcactgttcctatatcagatttgtcctgtgtgtgatgaaagctta-ggggaggatgcaatcaggatggtgaagaa |
34506030 |
T |
|
| Q |
603 |
ctcaatcttccaaatctcacaaaaggtatctgtaacttatcttgtgatttatgtgctttaattgtaaaattgcttagtttctgcatagaagtatttgatt |
702 |
Q |
| |
|
||||| ||||| ||||||||||||||| |||||||||||||||||||||||| ||| ||||||||| ||||||||||||||| |
|
|
| T |
34506029 |
ctcaagcttcccaatctcacaaaaggt-------------------atttatgtgctttaattgtaaaatagctcagtttctgcgtagaagtatttgatt |
34505949 |
T |
|
| Q |
703 |
cttatataacccaattcattatgctgatataacgatgtatgctttctacataggggatttggaaccctcg---gagaaacggagtctcacatgttcattg |
799 |
Q |
| |
|
||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||| | |||||| |||||||| ||||||| |
|
|
| T |
34505948 |
cttatctaacccaatttattatgctgatataacgatgtatgctttctacatagtggatttggaagcctcgaaaaaaaaacggcatctcacatattcattg |
34505849 |
T |
|
| Q |
800 |
ggaattgcatgacaagaaagatgcttcctgggaacccaac-aacatgaaccagtgcctgattcaatttcgccagcgtctagggacaatgtgtatcttcca |
898 |
Q |
| |
|
|| ||||||| | |||||||||||||||||||||| |||| |||| |||||| ||||||||||||||||||| |||| || ||||||||||||||||||| |
|
|
| T |
34505848 |
ggcattgcatcataagaaagatgcttcctgggaacacaacaaacacgaaccaatgcctgattcaatttcgcctgcgtttatggacaatgtgtatcttcca |
34505749 |
T |
|
| Q |
899 |
agcttgaatgatatgctctcagatgaagaagataccatcagcaatgcctcagatg-tgtcattgcagaagacacatccatt-ccaaaaggtatgatcctt |
996 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| ||||| ||||||||||||| |||| ||| | | |||||||||||| | |||||||||| ||||| |
|
|
| T |
34505748 |
agcttgaatgatattctctcagatgaagaagatacaatcagaaatgcctcagatgttgtcgttgaaaacgacacatccattgcaaaaaggtatggtcctt |
34505649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 7 - 337
Target Start/End: Complemental strand, 34527232 - 34526908
Alignment:
| Q |
7 |
acattctgatgctgattcattttaaacctaacagaagatacttcagtttcaaatcaagttgatccggatgaggttaatctattgattgtaaaatgtgatg |
106 |
Q |
| |
|
|||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| || |
|
|
| T |
34527232 |
acattctgatgctgatccattttgaacccgacagaagatacttcagtttcaaatcaagtcgatccggatgaggttaatctaccgattgtaaaatgtcctg |
34527133 |
T |
|
| Q |
107 |
catgtggttccgacattgaagtttcaattggccgtgaccgttcagtagattttgatgcatataatacggtatgatctcctgaattttataacttatgttt |
206 |
Q |
| |
|
||||| || | ||||||||||||||| || ||||||||||||||| |||||||||||||| ||||||| ||||||||||| |||| |||||||| |
|
|
| T |
34527132 |
tatgtgatttcaacattgaagtttcaactg------accgttcagtagattatgatgcatataatatggtatgacctcctgaatttcataatttatgttt |
34527039 |
T |
|
| Q |
207 |
agcagaacttatttctgaagtatttctttgagtttttgttagatttggtttcataatccgatatttcttgattgaatgataactggattattgacattgt |
306 |
Q |
| |
|
|||||||||| || |||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||| || ||||| |||||| |
|
|
| T |
34527038 |
agcagaacttgttactgaagtatttctttgggtttttgttagatttggtttcattttccgatatttcatgattgaatgataactagactattgtcattgt |
34526939 |
T |
|
| Q |
307 |
tataatctgtaaaaatgaatttccttgctta |
337 |
Q |
| |
|
|||||| ||||||||||||| |||||||||| |
|
|
| T |
34526938 |
tataatttgtaaaaatgaatgtccttgctta |
34526908 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 155; E-Value: 9e-82
Query Start/End: Original strand, 363 - 766
Target Start/End: Complemental strand, 34478337 - 34477940
Alignment:
| Q |
363 |
tatatcagcttgatgtagtgcacttgttctgatcttaataaaaagatgagcatgaagcaaccattttagtcaaaaactaag--gaaaattgaaacaagac |
460 |
Q |
| |
|
|||| ||||||||| ||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||| ||||| ||||| |
|
|
| T |
34478337 |
tatagcagcttgatatagtgcact-gtcctgatcttaacaaaaagatgagcatgaagcaaccattttagtcaaaaaccaagtaaaaaaatgaaataagac |
34478239 |
T |
|
| Q |
461 |
atttctaagcatttaacataggtattgtacttagttataattgaaaattggtatctgagtgactgcttcactgttcctatatcagatttgtcctgcgtgc |
560 |
Q |
| |
|
|||| ||| |||||||| | ||| ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||| ||| |
|
|
| T |
34478238 |
atttttaaacatttaacgcaagta---tacttagttataattgaaatttgatatctgagtgactgcatcactgttcctatatcagatttgtcctttgtgt |
34478142 |
T |
|
| Q |
561 |
aataaaggcttagggggaggatgcaatcaggatggtgcaaaactcaatcttccaaatctcacaaaaggtatctgtaacttatcttgtgatttatgtgctt |
660 |
Q |
| |
|
|| || ||||| ||||||||||||| |||||||||||| |||||| ||| | | ||| | |||||||||||| ||||||||||||||||||||||| |
|
|
| T |
34478141 |
gatgaaagctta-ggggaggatgcaaccaggatggtgcagaactcacgcttaccatcctcgccaaaggtatctgttgcttatcttgtgatttatgtgctt |
34478043 |
T |
|
| Q |
661 |
taattgtaaaattgcttagtttctgcatagaagtatttgattcttatataacccaattcattatgctgatataacgatgtatgctttctacataggggat |
760 |
Q |
| |
|
||||||||| || ||| ||||| || | |||||||||||||||| ||| |||||||||||| || ||||| |||||||||| |||||||||| || |
|
|
| T |
34478042 |
taattgtaacatagctcagttt---cagtgtagtatttgattcttatctaaatcaattcattatggtggtataaaaatgtatgcttcctacatagggaat |
34477946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 729 - 984
Target Start/End: Complemental strand, 34526694 - 34526434
Alignment:
| Q |
729 |
atataacgatgtatgctttctacataggggatttggaaccctcggagaaa---cggagtctcacatgttcattgggaattgcatgacaagaaagatgctt |
825 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||| ||||||| ||| ||| || | |||||||||||||| |||||| |||||||||||||| |
|
|
| T |
34526694 |
atataacgatgtatgctttctacatagtggatttggaaacctcggaaaaaaaacggcgtacaaaatgttcattgggaagtgcatggcaagaaagatgctt |
34526595 |
T |
|
| Q |
826 |
cctgggaacccaacaa-catgaaccagtgcctgattcaatttcgccagcgtctagggacaatgtgtatcttccaagcttgaatgatatgctctcagatga |
924 |
Q |
| |
|
| |||||| |||||| ||||||| | |||||||||||||||||||||||| |||||| ||||||||||||| |||||||||| |||| || |||||||| |
|
|
| T |
34526594 |
ctagggaacacaacaaacatgaacaaatgcctgattcaatttcgccagcgtttagggagaatgtgtatcttcaaagcttgaattatatactttcagatga |
34526495 |
T |
|
| Q |
925 |
agaagataccatcagcaatgcctcagatg-tgtcattgcagaagacacatccattccaaaa |
984 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| ||||| | |||||||||||| ||||| |
|
|
| T |
34526494 |
agaagataccatcagcaatgcctcagatgatgtcgttgcaaacgacacatccattgcaaaa |
34526434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 354 - 446
Target Start/End: Complemental strand, 34463268 - 34463176
Alignment:
| Q |
354 |
taaaatttctatatcagcttgatgtagtgcacttgttctgatcttaataaaaagatgagcatgaagcaaccattttagtcaaaaactaaggaa |
446 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |
|
|
| T |
34463268 |
taaaatttctgtatcagcttgatgtagtgcacttgtcctgatcttaataaaaagatgagcatgaagcaaccattttaataaaaaactaaggaa |
34463176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 500 - 766
Target Start/End: Complemental strand, 34463159 - 34462898
Alignment:
| Q |
500 |
attgaaaattggtatctgagtgactgcttcactgttcctatatcagatttgtcctgcgtgcaataaaggcttagggggaggatgcaatcaggatggtgca |
599 |
Q |
| |
|
||||||| ||| ||||||| ||||||||||||||||| |||||||||||||||||| |||| || || ||||||| |||| |||||||| | |||| |
|
|
| T |
34463159 |
attgaaatttgatatctgaatgactgcttcactgttcatatatcagatttgtcctgtgtgccatgaaaatttagggg-aggaggcaatcagaaatatgca |
34463061 |
T |
|
| Q |
600 |
aaactcaatcttccaaatctcacaaaaggtatctgtaacttatcttgtgatttatgtgctttaattgtaaaattgcttagtttctgcatagaagtatttg |
699 |
Q |
| |
|
| |||| ||||| | | | |||||||||||| ||||||||||||| |||||||||||||||||| || ||| | |||| |||| ||||||| |
|
|
| T |
34463060 |
gagttcaagcttcccagccgtgccaaaggtatctgttgcttatcttgtgatgtatgtgctttaattgtaacatagctcattttc-gcat---agtattta |
34462965 |
T |
|
| Q |
700 |
attcttatataacccaattcattatgctgatataacgatgtatgctttctacataggggatttggaa |
766 |
Q |
| |
|
|||||||| ||| |||||||||||| |||||| || ||||||||||||||||||||| |||||||| |
|
|
| T |
34462964 |
attcttatctaaatcaattcattatggtgatattacaatgtatgctttctacatagggcatttggaa |
34462898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 398 - 816
Target Start/End: Complemental strand, 34474383 - 34473965
Alignment:
| Q |
398 |
taataaaaagatgagcatgaagcaaccattttagtcaaaaactaaggaaaattgaaacaagacatttctaagcatttaacataggtattgtacttagtta |
497 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||| ||||| ||||| || | ||||||||||| ||||||||| |||||| || |||||| |
|
|
| T |
34474383 |
taataaaaagattagcatgaagcaaccattttagtcaataactattgaaaaaatgaataggacatttctaaacatttaacacaggtat---acgtagtta |
34474287 |
T |
|
| Q |
498 |
taattgaaaattggtatctgagtgactgcttcactgttcctatatcagatttgtcctgcgtgcaataaaggcttagggggaggatgcaatcaggatggtg |
597 |
Q |
| |
|
||| | ||| ||| ||||||| |||||||||||||| ||||||||||||||| ||||| |||| || || || |||||||| | ||||||||||||| |
|
|
| T |
34474286 |
taacttaaatttgatatctgaatgactgcttcactgctcctatatcagatttatcctgtgtgccatgaa-aatttcggggaggaggaaatcaggatggtg |
34474188 |
T |
|
| Q |
598 |
caaaactcaatcttccaaatctcacaaaaggtatctgtaacttatcttgtgatttatgtgctttaattgtaaaattgcttagtttctgcatagaagtatt |
697 |
Q |
| |
|
|| | |||| ||||| || || | |||| ||||| |||||||||||||| || || ||||| ||||| || ||| | |||| | ||| | ||| |
|
|
| T |
34474187 |
cagagttcaagcttcccaaccttgcgaaagctatctactgcttatcttgtgattcatatgatttaaatgtaacatagctcactttcagggtaggtgaatt |
34474088 |
T |
|
| Q |
698 |
tgattc----ttatataacccaattcattatgctgatataacgatgtatgctttctacataggggatttggaaccctcggagaaacggagtctcacatgt |
793 |
Q |
| |
|
| |||| |||| |||| |||||| || || | ||||| |||||||| |||||||||| | | ||||| ||| | |||| |||||| ||||| |||| |
|
|
| T |
34474087 |
ttattcttaattatgtaactcaattcgttgtgttaatatatcgatgtatactttctacatggcgcatttgaaactcgcggaaaaacggtgtctccgatgt |
34473988 |
T |
|
| Q |
794 |
tcattgggaattgcatgacaaga |
816 |
Q |
| |
|
| |||||| |||||||||||||| |
|
|
| T |
34473987 |
tgattgggcattgcatgacaaga |
34473965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 512 - 651
Target Start/End: Complemental strand, 34526846 - 34526708
Alignment:
| Q |
512 |
tatctgagtgactgcttcactgttcctatatcagatttgtcctgcgtgcaataaaggcttagggggaggatgcaatcaggatggtgcaaaactcaatctt |
611 |
Q |
| |
|
||||||| |||||||| |||||||||||||||||| |||||||| ||| || || ||||||||| ||||||||||||||||||| || ||| ||| ||| |
|
|
| T |
34526846 |
tatctgaatgactgctacactgttcctatatcagaattgtcctgtgtgtgatgaaagcttagggg-aggatgcaatcaggatggttcagaacacaagctt |
34526748 |
T |
|
| Q |
612 |
ccaaatctcacaaaaggtatctgtaacttatcttgtgatt |
651 |
Q |
| |
|
|| ||||||||| ||||||||||||| ||||||||||||| |
|
|
| T |
34526747 |
cccaatctcacagaaggtatctgtaaattatcttgtgatt |
34526708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 372 - 497
Target Start/End: Complemental strand, 34487237 - 34487111
Alignment:
| Q |
372 |
ttgatgtagtgcacttgttctgatcttaataaaaagatgagcatgaagcaaccattttagtcaaaaacta-aggaaaattgaaacaagacatttctaagc |
470 |
Q |
| |
|
||||| |||||||| ||| |||||||||||||||||||||||||||| |||||| |||| |||||||||| || |||||||||| ||||||||||||| | |
|
|
| T |
34487237 |
ttgatatagtgcacatgtcctgatcttaataaaaagatgagcatgaaacaaccaatttattcaaaaactatagaaaaattgaaagaagacatttctaaac |
34487138 |
T |
|
| Q |
471 |
atttaacataggtattgtacttagtta |
497 |
Q |
| |
|
||||||| |||||| |||||| |||| |
|
|
| T |
34487137 |
atttaacgcaggtatagtactttgtta |
34487111 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 434 - 826
Target Start/End: Complemental strand, 34512284 - 34511903
Alignment:
| Q |
434 |
aaaaactaagg-aaaattgaaacaagacatttctaagcatttaacataggtattgtacttagttataattgaaaattggtatctgagtgactgcttcact |
532 |
Q |
| |
|
||||||||||| |||| ||||| || | |||||||| ||||||||| |||||| |||||||| ||||||||||| ||| ||| ||| ||||||||||| | |
|
|
| T |
34512284 |
aaaaactaagggaaaaatgaaataaaagatttctaaacatttaacacaggtatagtacttagatataattgaaatttgatatttgaatgactgcttcaat |
34512185 |
T |
|
| Q |
533 |
gttcctatatcagatttgtcctgcgtgcaataaaggcttagggggaggatgcaatcaggatggtgcaaaactcaatcttccaaatctcacaaaaggtatc |
632 |
Q |
| |
|
|| |||||||||||| ||||||| | || || || || ||||||||| ||||||||| || | | | |||| ||| |||||||||| |
|
|
| T |
34512184 |
gtccctatatcagatatgtcctgtgagccatgaa-aatttgggggaggaggcaatcagggtgccgtagagttcaagctt---------gcaaaaggtata |
34512095 |
T |
|
| Q |
633 |
tgtaacttatcttgtgatttatgtgctttaattgtaaaattgcttagtttctgcatagaagtatttgattcttatataacccaattcattatgctgatat |
732 |
Q |
| |
|
||| ||||||| ||||||||||| |||||||||||||| ||| || ||| | ||| |||||| ||||||||| |||| |||||||| || | |||| |
|
|
| T |
34512094 |
tgttgcttatctcgtgatttatgt--tttaattgtaaaatagctcagcttccgggtaggagtattggattcttatgtaacttaattcattttgttaatat |
34511997 |
T |
|
| Q |
733 |
aacgatgtatgctttctacataggggatttggaaccctcggagaaacggagtctcacatgttcattgggaattgcatgacaagaaagatgcttc |
826 |
Q |
| |
|
|| ||||| | |||||||||||| | | ||||||| | |||| |||||| ||||| ||||||||||| ||||||||| ||| || ||||||| |
|
|
| T |
34511996 |
aatgatgtgtactttctacatagcgcaattggaacacgcggaaaaacggtgtctccattgttcattgggcattgcatgaaaaggaacatgcttc |
34511903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 434 - 555
Target Start/End: Complemental strand, 27626512 - 27626390
Alignment:
| Q |
434 |
aaaaactaagg-aaaattgaaacaagacatttctaagcatttaacataggtattgtacttagttataattgaaaattggtatctgagtgactgcttcact |
532 |
Q |
| |
|
||||||||||| |||| ||||| || | |||||||| ||||||||| |||||| |||||||| ||||||||||| ||| ||| ||| |||||||| || | |
|
|
| T |
27626512 |
aaaaactaagggaaaaatgaaataaaagatttctaaacatttaacacaggtatagtacttagatataattgaaatttgatatttgaatgactgctacaat |
27626413 |
T |
|
| Q |
533 |
gttcctatatcagatttgtcctg |
555 |
Q |
| |
|
|| |||||||||||| ||||||| |
|
|
| T |
27626412 |
gtccctatatcagatatgtcctg |
27626390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 378 - 448
Target Start/End: Original strand, 34372183 - 34372252
Alignment:
| Q |
378 |
tagtgcacttgttctgatcttaataaaaagatgagcatgaagcaaccattttagtcaaaaactaaggaaaa |
448 |
Q |
| |
|
||||||||| || |||||||||||||||||| |||||||| ||||||||| |||||||||||||| ||||| |
|
|
| T |
34372183 |
tagtgcact-gtcctgatcttaataaaaagacgagcatgaggcaaccattatagtcaaaaactaaagaaaa |
34372252 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 692 - 936
Target Start/End: Complemental strand, 34489239 - 34488996
Alignment:
| Q |
692 |
agtatttgattcttatataacccaattcattatgctgatataacgatgtatgctttctacataggggatttggaaccctcggagaaacggagtctcacat |
791 |
Q |
| |
|
||||||||||||| || |||| ||||||| |||| |||||||| |||| || ||||||||||| ||||||||||||| |||| |||||| |||| | |
|
|
| T |
34489239 |
agtatttgattctcatctaactcaattcaatatgttgatataatgatgcataatttctacatagcggatttggaacccgcggaaaaacggtatctcgaac |
34489140 |
T |
|
| Q |
792 |
gttcattgggaattgcatgacaagaaagatgcttcctgggaacccaac-aacatgaaccagtgcctgattcaatttcgccagcgtctagggacaatgtgt |
890 |
Q |
| |
|
||| |||||| ||| ||| ||||||||| || || |||| | |||| ||||||||||| | ||||||||||| || | | |||| ||||| || |
|
|
| T |
34489139 |
gttgattgggcattacatctcaagaaagacgcatcttggggaaacaacaaacatgaaccaatctttgattcaattt--tcaccatttaggaacaattcgt |
34489042 |
T |
|
| Q |
891 |
atcttccaagcttgaatgatatgctctcagatgaagaagataccat |
936 |
Q |
| |
|
|||||||||||| |||||| | | |||||||||||| ||||||| |
|
|
| T |
34489041 |
atcttccaagctccaatgattttgtttcagatgaagaaaataccat |
34488996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 696 - 833
Target Start/End: Complemental strand, 27624586 - 27624450
Alignment:
| Q |
696 |
tttgattcttatataacccaattcattatgctgatataacgatgtatgctttctacataggggatttggaaccctcggagaaacggagtctcacatgttc |
795 |
Q |
| |
|
|||||||| ||| |||| |||||||||||| ||||| ||| |||||| || |||| |||| |||| ||||| | || || |||| | |||||| ||||| |
|
|
| T |
27624586 |
tttgattcatatctaactcaattcattatgttgataaaacaatgtatactctctaaatagcggatatggaatcttcagaaaaacagtgtctcaaatgttg |
27624487 |
T |
|
| Q |
796 |
attgggaattgcatgacaagaaagatgcttcctgggaa |
833 |
Q |
| |
|
|||||| ||| |||| ||||||| |||||||||||||| |
|
|
| T |
27624486 |
attgggtattacatg-caagaaatatgcttcctgggaa |
27624450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 365 - 497
Target Start/End: Complemental strand, 27628752 - 27628622
Alignment:
| Q |
365 |
tatcagcttgatgtagtgcacttgttctgatcttaataaaaagatgagcatgaagcaaccattttagtcaaaaactaaggaaaattgaaacaagacattt |
464 |
Q |
| |
|
|||||||||||| |||||||| ||| | ||||||||||||||||||||||||| ||| || ||| ||||||||| || |||||| ||| |||||||| |
|
|
| T |
27628752 |
tatcagcttgatatagtgcacatgtcccgatcttaataaaaagatgagcatgatacaatca-attattcaaaaact-agaaaaattaaaagaagacattc |
27628655 |
T |
|
| Q |
465 |
ctaagcatttaacataggtattgtacttagtta |
497 |
Q |
| |
|
|| | |||||||| |||||| |||||| |||| |
|
|
| T |
27628654 |
cttaacatttaacgcaggtatagtactttgtta |
27628622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 638 - 779
Target Start/End: Complemental strand, 27626317 - 27626178
Alignment:
| Q |
638 |
cttatcttgtgatttatgtgctttaattgtaaaattgcttagtttctgcatagaagtatttgattcttatataacccaattcattatgctgatataacga |
737 |
Q |
| |
|
||||||||||||||||||| |||||||||||||| ||| || ||| | ||| |||||| ||||||||| |||| |||||||| | | |||||| || |
|
|
| T |
27626317 |
cttatcttgtgatttatgt--tttaattgtaaaatagctcagcttccgggtaggagtattggattcttatgtaacttaattcattttcttaatataatga |
27626220 |
T |
|
| Q |
738 |
tgtatgctttctacataggggatttggaaccctcggagaaac |
779 |
Q |
| |
|
||| | |||||||||||| | | ||||||||| |||| |||| |
|
|
| T |
27626219 |
tgtgtactttctacatagcgcaattggaacccgcggaaaaac |
27626178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 644 - 712
Target Start/End: Original strand, 34375769 - 34375837
Alignment:
| Q |
644 |
ttgtgatttatgtgctttaattgtaaaattgcttagtttctgcatagaagtatttgattcttatataac |
712 |
Q |
| |
|
||||||||||||| |||| |||||||||| ||| ||||||||| | | | |||||||||||||| |||| |
|
|
| T |
34375769 |
ttgtgatttatgttctttgattgtaaaatagctcagtttctgcgtcggaatatttgattcttatctaac |
34375837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 696 - 751
Target Start/End: Complemental strand, 27628617 - 27628562
Alignment:
| Q |
696 |
tttgattcttatataacccaattcattatgctgatataacgatgtatgctttctac |
751 |
Q |
| |
|
|||||||| || |||| |||||||||||| |||||||||||||||| |||||||| |
|
|
| T |
27628617 |
tttgattcatacctaactcaattcattatgttgatataacgatgtatactttctac |
27628562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 491 - 534
Target Start/End: Original strand, 34375681 - 34375724
Alignment:
| Q |
491 |
ttagttataattgaaaattggtatctgagtgactgcttcactgt |
534 |
Q |
| |
|
|||||||||||||||| ||||||||||| ||||||||| ||||| |
|
|
| T |
34375681 |
ttagttataattgaaatttggtatctgaatgactgctttactgt |
34375724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 692 - 781
Target Start/End: Complemental strand, 34469517 - 34469428
Alignment:
| Q |
692 |
agtatttgattcttatataacccaattcattatgctgatataacgatgtatgctttctacataggggatttggaaccctcggagaaacgg |
781 |
Q |
| |
|
|||||||||||||| | |||| ||||||| |||| ||||||||||||| || ||| ||||| | ||||||||||| |||| |||||| |
|
|
| T |
34469517 |
agtatttgattcttttctaactcaattcaatatgatgatataacgatgaataatttatacattgcagatttggaacctgcggaaaaacgg |
34469428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 70; Significance: 5e-31; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 451 - 683
Target Start/End: Original strand, 15741113 - 15741341
Alignment:
| Q |
451 |
gaaacaagacatttctaagcatttaacataggtattgtacttagttataattgaaaattggtatctgagtgactgcttcactgttcctatatcagatttg |
550 |
Q |
| |
|
|||| ||||||||||||| |||||| | ||||| |||||||||||||||||||| ||| ||||||| || | | |||||||||||||| |||||||| |
|
|
| T |
15741113 |
gaaataagacatttctaaacatttagcgctggtatagtacttagttataattgaaatttgatatctgactggccg-ttcactgttcctat--cagatttg |
15741209 |
T |
|
| Q |
551 |
tcctgcgtgcaataaaggcttagggggaggatgcaatcaggatggtgcaaaactcaatcttccaaatctcacaaaaggtatctgtaacttatcttgtgat |
650 |
Q |
| |
|
||||| ||| ||||| ||||||| |||||| ||||||||||||||| | |||| ||||| |||||| | |||||||| ||| || | ||||||||| |
|
|
| T |
15741210 |
tcctgtgtgtgataaaaatttagggg-aggatgtaatcaggatggtgcagagttcaagcttcccaatctcgccaaaggtatttgttacctgtcttgtgat |
15741308 |
T |
|
| Q |
651 |
ttatgtgctttaattgtaaaattgcttagtttc |
683 |
Q |
| |
|
|||||||||| |||||||| || | |||||||| |
|
|
| T |
15741309 |
ttatgtgcttaaattgtaacataggttagtttc |
15741341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 70; Significance: 5e-31; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 451 - 683
Target Start/End: Complemental strand, 1575263 - 1575035
Alignment:
| Q |
451 |
gaaacaagacatttctaagcatttaacataggtattgtacttagttataattgaaaattggtatctgagtgactgcttcactgttcctatatcagatttg |
550 |
Q |
| |
|
|||| ||||||||||||| |||||| | ||||| |||||||||||||||||||| ||| ||||||| || | | |||||||||||||| |||||||| |
|
|
| T |
1575263 |
gaaataagacatttctaaacatttagcgctggtatagtacttagttataattgaaatttgatatctgactggccg-ttcactgttcctat--cagatttg |
1575167 |
T |
|
| Q |
551 |
tcctgcgtgcaataaaggcttagggggaggatgcaatcaggatggtgcaaaactcaatcttccaaatctcacaaaaggtatctgtaacttatcttgtgat |
650 |
Q |
| |
|
||||| ||| ||||| ||||||| |||||| ||||||||||||||| | |||| ||||| |||||| | |||||||| ||| || | ||||||||| |
|
|
| T |
1575166 |
tcctgtgtgtgataaaaatttagggg-aggatgtaatcaggatggtgcagagttcaagcttcccaatctcgccaaaggtatttgttacctgtcttgtgat |
1575068 |
T |
|
| Q |
651 |
ttatgtgctttaattgtaaaattgcttagtttc |
683 |
Q |
| |
|
|||||||||| |||||||| || | |||||||| |
|
|
| T |
1575067 |
ttatgtgcttaaattgtaacataggttagtttc |
1575035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 56; Significance: 1e-22; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 495 - 705
Target Start/End: Complemental strand, 10533829 - 10533622
Alignment:
| Q |
495 |
ttataattgaaaattggtatctgagtgactgcttcactgttcctatatcagatttgtcctgcgtgcaataaaggcttagggggaggatgcaatcaggatg |
594 |
Q |
| |
|
|||||||||||| ||| ||||||| || ||| || ||||||||||| ||||||||||||| ||| ||||| |||||||| |||||| |||||||||| |
|
|
| T |
10533829 |
ttataattgaaatttgatatctgaatggctgttttactgttcctat--cagatttgtcctgtgtgtgataaaaacttagggg-aggatgtaatcaggatg |
10533733 |
T |
|
| Q |
595 |
gtgcaaaactcaatcttccaaatctcacaaaaggtatctgtaacttatcttgtgatttatgtgctttaattgtaaaattgcttagtttctgcatagaagt |
694 |
Q |
| |
|
||||| | |||| ||| || || | |||||||||||| |||| ||||||||||||||||||| |||||||| || | |||||||| | ||| ||| |
|
|
| T |
10533732 |
gtgcagagttcaagactcccaacatcgccaaaggtatctgttacttgtcttgtgatttatgtgcttaaattgtaacataggttagtttcagtgtaggagt |
10533633 |
T |
|
| Q |
695 |
atttgattctt |
705 |
Q |
| |
|
|| |||||||| |
|
|
| T |
10533632 |
atctgattctt |
10533622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 365 - 532
Target Start/End: Complemental strand, 10531469 - 10531311
Alignment:
| Q |
365 |
tatcagcttgatgtagtgcacttgttctgatcttaataaaaagatgagcatgaagcaaccattttagtcaaaaactaaggaaaattgaaacaagacattt |
464 |
Q |
| |
|
|||| |||||||||||||||| || |||||||| | || | |||||||| || ||||||||||||||||||||||| ||||||| ||| || |||||| |
|
|
| T |
10531469 |
tatctgcttgatgtagtgcac--gtcctgatctttaaaataccatgagcataaaacaaccattttagtcaaaaactaa-gaaaatt-aaataatacattt |
10531374 |
T |
|
| Q |
465 |
ctaagcatttaacataggtattgtacttagttataattgaaaattggtatctgagtgactgcttcact |
532 |
Q |
| |
|
|| | ||||||||| || ||||||||||||||||||| | ||||||||| ||||||||||||| |
|
|
| T |
10531373 |
ctcaacatttaacacag-----ttacttagttataattgaaattcggtatctgaatgactgcttcact |
10531311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 495 - 669
Target Start/End: Complemental strand, 10527014 - 10526843
Alignment:
| Q |
495 |
ttataattgaaaattggtatctgagtgactgcttcactgttcctatatcagatttgtcctgcgtgcaataaaggcttagggggaggatgcaatcaggatg |
594 |
Q |
| |
|
|||||||||||| ||| ||||||| || ||| || ||||||||||| ||||||||||||| ||| ||||| ||| ||| |||||| |||||||||| |
|
|
| T |
10527014 |
ttataattgaaatttgatatctgaatggctgttttactgttcctat--cagatttgtcctgtgtgtgataaaaatttaaggg-aggatgtaatcaggatg |
10526918 |
T |
|
| Q |
595 |
gtgcaaaactcaatcttccaaatctcacaaaaggtatctgtaacttatcttgtgatttatgtgctttaattgtaa |
669 |
Q |
| |
|
||||| | |||| ||| || || | |||||||||||| |||| ||||||||||||||||||| |||||||| |
|
|
| T |
10526917 |
gtgcagagttcaagactcccaacatcgccaaaggtatctgttacttgtcttgtgatttatgtgcttaaattgtaa |
10526843 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 391 - 427
Target Start/End: Complemental strand, 10527049 - 10527013
Alignment:
| Q |
391 |
ctgatcttaataaaaagatgagcatgaagcaaccatt |
427 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||| |
|
|
| T |
10527049 |
ctgatcttaataaaaagacgagcatgaagcaaccatt |
10527013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1215 (Bit Score: 48; Significance: 7e-18; HSPs: 2)
Name: scaffold1215
Description:
Target: scaffold1215; HSP #1
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 495 - 705
Target Start/End: Complemental strand, 1014 - 807
Alignment:
| Q |
495 |
ttataattgaaaattggtatctgagtgactgcttcactgttcctatatcagatttgtcctgcgtgcaataaaggcttagggggaggatgcaatcaggatg |
594 |
Q |
| |
|
|||||||||||| ||| ||||||| || ||| || ||||||||||| ||||||||||||| ||| ||||| ||| ||| |||||| |||||||||| |
|
|
| T |
1014 |
ttataattgaaatttgatatctgaatggctgttttactgttcctat--cagatttgtcctgtgtgtgataaaaatttaaggg-aggatgtaatcaggatg |
918 |
T |
|
| Q |
595 |
gtgcaaaactcaatcttccaaatctcacaaaaggtatctgtaacttatcttgtgatttatgtgctttaattgtaaaattgcttagtttctgcatagaagt |
694 |
Q |
| |
|
||||| | |||| ||| || || | |||||||||||| |||| ||||||||||||||||||| |||||||| || | |||||||| | ||| ||| |
|
|
| T |
917 |
gtgcagagttcaagactcccaacatcgccaaaggtatctgttacttgtcttgtgatttatgtgcttaaattgtaacataggttagtttcagtgtaggagt |
818 |
T |
|
| Q |
695 |
atttgattctt |
705 |
Q |
| |
|
|| |||||||| |
|
|
| T |
817 |
atctgattctt |
807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1215; HSP #2
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 391 - 427
Target Start/End: Complemental strand, 1049 - 1013
Alignment:
| Q |
391 |
ctgatcttaataaaaagatgagcatgaagcaaccatt |
427 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||| |
|
|
| T |
1049 |
ctgatcttaataaaaagacgagcatgaagcaaccatt |
1013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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