View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5722_high_12 (Length: 275)
Name: NF5722_high_12
Description: NF5722
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5722_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 39954837 - 39954595
Alignment:
| Q |
19 |
aaatttagggtttagtttgttctggtcgatttagttctaaatctggttaatataaatttagtagtcttagatctggttgaatgcttagttctgtggttct |
118 |
Q |
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| T |
39954837 |
aaatttagggtttagtttgttctggtcgatttagttctaaatctggttaatataaatttagtagtcttagatctggttgaatgcttagtcctgtggttct |
39954738 |
T |
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| Q |
119 |
agtatttggacttgtatcttaattcttaacgatgaatgaatgaattttgtctttgctgaaattactttgaacctagcacatttgcttttacttttaattt |
218 |
Q |
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| T |
39954737 |
agtatttggacttgtatcttaattcttaacgatgaatgaatgaattttgtctttgctgaaattactttgaacctagcacatttgcttttacttttaattt |
39954638 |
T |
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| Q |
219 |
tgtgagaatataatctgtttgaattttacatttgtttcatctc |
261 |
Q |
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| T |
39954637 |
tgtgagaatataatctgtttgaattttacatttgtttcatctc |
39954595 |
T |
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