View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5723-Insertion-1 (Length: 1183)
Name: NF5723-Insertion-1
Description: NF5723
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5723-Insertion-1 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 949; Significance: 0; HSPs: 34)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 949; E-Value: 0
Query Start/End: Original strand, 8 - 1120
Target Start/End: Complemental strand, 6365067 - 6363954
Alignment:
| Q |
8 |
gttactactatttaaaatcatcatcagtgaaattgagagtccaatttttgtataggaaaaaccggtaaaggcaaagtcggagagaaaacgtatctgaaaa |
107 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| || |
|
|
| T |
6365067 |
gttactactatttaaaatcatcatcagtgaaattgagagtccaatttttgtataggaaaaaccggaaaaggcaaagtgggagagaaaacgtatctggcaa |
6364968 |
T |
|
| Q |
108 |
gtgttattacctccttgccaacattgggagataagcaaaatgctttcagtattgaatttgaatgggacaatgacatgggaactccaggagctttttatat |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6364967 |
gtgttattacctccttgccaacattgggagataaacaaaatgctttcagtattgaatttgaatgggacaatgacatgggaactccaggagctttttatat |
6364868 |
T |
|
| Q |
208 |
tgagaattatctgcaaggtggtgaattcttccttgtcagcttgactcttgaagatgttccaaaccatggaaccatcaactttgtttgcaactcatgggtt |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6364867 |
tgagaattatctgcaaggtggtgaattcttccttgtcagcttgactcttgaagatgttccaaaccatggaaccatcaactttgtttgcaactcatgggtt |
6364768 |
T |
|
| Q |
308 |
tacaacgctaaaaattacaaaactaaacgcattttctttgccaacaaggtaagaatatttataaattatatccaacatgtatgtataacttgttaaatan |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
6364767 |
tacaacgctaaaaattacaaaactaaacgcattttctttgccaacaaggtaagaatatttataaattatatccaacat----gtataacttgttaaatat |
6364672 |
T |
|
| Q |
408 |
nnnnnnagactaaaaattctcttttccaaaaacttgacacaatcaatgactacaattttgtagacataccttccaagtgaaacaccagctcctttagtgt |
507 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
6364671 |
ttttttagactataaattctcttttccaaaaacttgacacaatcaatgactacaattttgtagacataccttccaagtgaaacaccagctcctttagtct |
6364572 |
T |
|
| Q |
508 |
tctacggacaagaagaattgaagactttaagaggagatggaactggagagcgtaaggaatgggaaagaatatatgattatgatgtctacaatgatttggg |
607 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6364571 |
actacagacaagaagaattgaagactttaagaggagatggaactggagagcgtaaggaatgggaaagaatatatgattatgatgtctacaatgatttggg |
6364472 |
T |
|
| Q |
608 |
tgatgtggacaagaacgctagtttggctcgtcctgttgttggaggatctagcaccctcccttaccctcgaagagggaggaccggcaggaaagcagctcgt |
707 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
6364471 |
tgatgtggacaagaacgctagtttggctcgtcctgttgttggaggatctagcaccctcccttaccctcgaagagggagaaccggcaggaaagcagctcgt |
6364372 |
T |
|
| Q |
708 |
aaaggttataaactttatgttctatcttaacacttgagtatgttatattttaagaaattctggcaaaaattaagtgatatggtactaaaatgtgaaattg |
807 |
Q |
| |
|
||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6364371 |
aaaggttat-aactttacgttctatcttaacacttgagtatgttatattttaagaaattctggcaaaaattaagtgatatggtactaaaatgtgaaattg |
6364273 |
T |
|
| Q |
808 |
tattctacttgacaactaatgtttttatccctgatgttgtttactaagtctttttgttgatacaaatgtttactctgcttatgattctaaagcatacatt |
907 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
6364272 |
tattctacttgacaactaatgtttttatccctgatgttgtttactaagtctttttgttgatacaaatgtttactctgcttatgattctaaaacatacatt |
6364173 |
T |
|
| Q |
908 |
gttattgtatttgtgaacagatcctaagagtgagagtcgaagtgacactgtttacctcccaagggatgaatcatttggacacacaaagtcatcagacttt |
1007 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
6364172 |
gttattgtatttgtgaacagatcctaagagtgagagtcgaagtgacactgtttacctcccaagagatgaatcatttggacacacaaagtcatcagacttt |
6364073 |
T |
|
| Q |
1008 |
cttgttcacatactcaaatctgcatctc-aaatgtcata-ctcgattaagatctatag-tacattaca--ttcatgagcctggagttt-acac--ttgaa |
1099 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||| | ||||||||| |||||| |||| ||||| |
|
|
| T |
6364072 |
cttgttcacatactcaaatctgcatctcaaaatgtcatacctcgattaagatctatagttacattacaattccatgagcct-gagtttaacacctttgaa |
6363974 |
T |
|
| Q |
1100 |
gatgtgcgcctcgctctatga |
1120 |
Q |
| |
|
|||||||| |||||||||||| |
|
|
| T |
6363973 |
gatgtgcg-ctcgctctatga |
6363954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 466 - 694
Target Start/End: Complemental strand, 7460812 - 7460584
Alignment:
| Q |
466 |
tgtagacataccttccaagtgaaacaccagctcctttagtgttctacggacaagaagaattgaagactttaagaggagatggaactggagagcgtaagga |
565 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||| |
|
|
| T |
7460812 |
tgtagacataccttccaagtgcaacaccagctccattagtgtactacagacaagaagaattgaagactttaagaggagatggaacgggagagcgcaagga |
7460713 |
T |
|
| Q |
566 |
atgggaaagaatatatgattatgatgtctacaatgatttgggtgatgtggacaagaacgctagtttggctcgtcctgttgttggaggatctagcaccctc |
665 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||| ||||||||| ||| |||| ||||| |||||||||||||||| ||||||| || | | | | |
|
|
| T |
7460712 |
atgggacagaatatatgattatgatgtctacaatgacttgggtgatcccgaccagaaagctagcttggctcgtcctgttgctggaggacctggaaacttg |
7460613 |
T |
|
| Q |
666 |
ccttaccctcgaagagggaggaccggcag |
694 |
Q |
| |
|
|||||||||||||| || || |||||||| |
|
|
| T |
7460612 |
ccttaccctcgaaggggaagaaccggcag |
7460584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 125; E-Value: 9e-64
Query Start/End: Original strand, 114 - 364
Target Start/End: Complemental strand, 7461213 - 7460966
Alignment:
| Q |
114 |
ttacctccttgccaacattgggagataagcaaaatgctttcagtattgaatttgaatgggacaatgacatgggaactccaggagctttttatattgagaa |
213 |
Q |
| |
|
|||||||| | ||||||||||| || |||||| ||||||||||||| | ||| ||||||||| | |||||||| ||||||||||||||||||||| || |
|
|
| T |
7461213 |
ttacctccctcccaacattgggggacaagcaatctgctttcagtattcattttcaatgggacagtaccatgggaattccaggagctttttatattgataa |
7461114 |
T |
|
| Q |
214 |
ttatctgcaaggtggtgaattcttccttgtcagcttgactcttgaagatgttccaaaccatggaaccatcaactttgtttgcaactcatgggtttacaac |
313 |
Q |
| |
|
||| ||||||||| ||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |
|
|
| T |
7461113 |
ctatatgcaaggtg---aattcttccttgtgagtttgacacttgaagatgttccaaaccatggaaccatcaactttgtttgcaactcatggattcacaat |
7461017 |
T |
|
| Q |
314 |
gctaaaaattacaaaactaaacgcattttctttgccaacaaggtaagaata |
364 |
Q |
| |
|
||||||| |||||||| | ||||| |||||||||||||||||||||||| |
|
|
| T |
7461016 |
tctaaaaagtacaaaacggaccgcatcttctttgccaacaaggtaagaata |
7460966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 466 - 610
Target Start/End: Complemental strand, 6353740 - 6353596
Alignment:
| Q |
466 |
tgtagacataccttccaagtgaaacaccagctcctttagtgttctacggacaagaagaattgaagactttaagaggagatggaactggagagcgtaagga |
565 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
6353740 |
tgtagacataccttccaagtgaaacaccggctccattagtgtactacagacaagaagaattgaagactttaagaggagatggaactggagagcgcaagga |
6353641 |
T |
|
| Q |
566 |
atgggaaagaatatatgattatgatgtctacaatgatttgggtga |
610 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
6353640 |
atgggaaagaatatatgattacgatgtctacaatgatttgggtga |
6353596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 114 - 364
Target Start/End: Complemental strand, 6354203 - 6353956
Alignment:
| Q |
114 |
ttacctccttgccaacattgggagataagcaaaatgctttcagtattgaatttgaatgggacaatgacatgggaactccaggagctttttatattgagaa |
213 |
Q |
| |
|
|||||||| | |||||||||||||| || |||||||||||||||||| | ||||||||||||| | ||||||||| ||| ||||||||||| || || || |
|
|
| T |
6354203 |
ttacctccataccaacattgggagacaaacaaaatgctttcagtattcattttgaatgggacagtaacatgggaattcccggagctttttacatcgataa |
6354104 |
T |
|
| Q |
214 |
ttatctgcaaggtggtgaattcttccttgtcagcttgactcttgaagatgttccaaaccatggaaccatcaactttgtttgcaactcatgggtttacaac |
313 |
Q |
| |
|
|| | ||||||||| ||||||||||||| || ||||| |||||||||||||||||||||||| ||||| ||||||| |||||||||||| ||||||| |
|
|
| T |
6354103 |
ttttatgcaaggtg---aattcttccttgtgagtttgacacttgaagatgttccaaaccatggatccatccactttgtctgcaactcatggatttacaat |
6354007 |
T |
|
| Q |
314 |
gctaaaaattacaaaactaaacgcattttctttgccaacaaggtaagaata |
364 |
Q |
| |
|
||||||| |||||||| | ||||| |||||||||||||||||||||||| |
|
|
| T |
6354006 |
tctaaaaagtacaaaaccgaccgcatcttctttgccaacaaggtaagaata |
6353956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 468 - 717
Target Start/End: Complemental strand, 6275894 - 6275645
Alignment:
| Q |
468 |
tagacataccttccaagtgaaacaccagctcctttagtgttctacggacaagaagaattgaagactttaagaggagatggaactggagagcgtaaggaat |
567 |
Q |
| |
|
|||||||| |||||||||||||||||| |||| ||||| | ||| |||||||||| ||||| |||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
6275894 |
tagacatatcttccaagtgaaacaccacctccattagtctactatagacaagaagagttgaacactttaagaggagatggaacaggagagcgtaaagaat |
6275795 |
T |
|
| Q |
568 |
gggaaagaatatatgattatgatgtctacaatgatttgggtgatgtggacaagaacgctagtttggctcgtcctgttgttggaggatctagcaccctccc |
667 |
Q |
| |
|
||||||| || ||||| || ||||||||||||||| |||||||| |||||||| || || ||||||||||| ||| |||||||||| | |||| | || |
|
|
| T |
6275794 |
gggaaaggatctatgactacgatgtctacaatgatgtgggtgatcctgacaagaaagcaagcttggctcgtcccgttattggaggatccaacaccttgcc |
6275695 |
T |
|
| Q |
668 |
ttaccctcgaagagggaggaccggcaggaaagcagctcgtaaaggttata |
717 |
Q |
| |
|
|||||||||||||||||| |||||||||||| ||||| |||||||||| |
|
|
| T |
6275694 |
ttaccctcgaagagggagaaccggcaggaaaccagctaagaaaggttata |
6275645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 429 - 608
Target Start/End: Complemental strand, 6392274 - 6392094
Alignment:
| Q |
429 |
ttttccaaaaacttgaca-caatcaatgactacaattttgtagacataccttccaagtgaaacaccagctcctttagtgttctacggacaagaagaattg |
527 |
Q |
| |
|
|||| ||||||||||||| || ||||| || |||||||||| ||||||||| ||| |||||||||||||| ||| ||| |||| |||||||||||||| |
|
|
| T |
6392274 |
tttttcaaaaacttgacagcacccaatggttaaaattttgtaggcataccttctaagggaaacaccagctccattactgtactacagacaagaagaattg |
6392175 |
T |
|
| Q |
528 |
aagactttaagaggagatggaactggagagcgtaaggaatgggaaagaatatatgattatgatgtctacaatgatttgggt |
608 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
6392174 |
aatactttaagaggagatggaactggagagcgtaaggaatgggacagaatatatgattatgatgtctacaatgatttgggt |
6392094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 468 - 610
Target Start/End: Complemental strand, 6290646 - 6290504
Alignment:
| Q |
468 |
tagacataccttccaagtgaaacaccagctcctttagtgttctacggacaagaagaattgaagactttaagaggagatggaactggagagcgtaaggaat |
567 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |
|
|
| T |
6290646 |
tagacataccttccaagtgaaacaccagctccattagtgtactatagacaagaagaattgaagactttaagaggagatggaacaggagagcgcaaggaat |
6290547 |
T |
|
| Q |
568 |
gggaaagaatatatgattatgatgtctacaatgatttgggtga |
610 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
6290546 |
gggaaagaatatatgattacgatgtctacaatgatttaggtga |
6290504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 108 - 359
Target Start/End: Complemental strand, 6425754 - 6425506
Alignment:
| Q |
108 |
gtgttattacctccttgccaacattgggagataagcaaaatgctttcagtattgaatttgaatgggacaatgacatgggaactccaggagctttttatat |
207 |
Q |
| |
|
|||||||||||||| | |||||||| ||||| ||||||||||||| |||| || | |||||||||| || ||||||||||| ||||||||| || ||||| |
|
|
| T |
6425754 |
gtgttattacctccataccaacattaggagacaagcaaaatgcttacagtgttcattttgaatggggcagtgacatgggaattccaggagcattctatat |
6425655 |
T |
|
| Q |
208 |
tgagaattatctgcaaggtggtgaattcttccttgtcagcttgactcttgaagatgttccaaaccatggaaccatcaactttgtttgcaactcatgggtt |
307 |
Q |
| |
|
|||||||| | ||||| || | ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
6425654 |
tgagaattttttgcaacatg---agttcttccttgtgagtttgacacttgaagatgttccaaaccatggaaccatcaactttgtttgcaactcttgggtt |
6425558 |
T |
|
| Q |
308 |
tacaacgctaaaaattacaaaactaaacgcattttctttgccaacaaggtaa |
359 |
Q |
| |
|
||||| | ||||| ||||||| | | ||||| || || || |||||||||| |
|
|
| T |
6425557 |
tacaatgacaaaaaatacaaaagtgaccgcatctttttcgctaacaaggtaa |
6425506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 466 - 704
Target Start/End: Complemental strand, 6425430 - 6425192
Alignment:
| Q |
466 |
tgtagacataccttccaagtgaaacaccagctcctttagtgttctacggacaagaagaattgaagactttaagaggagatggaactggagagcgtaagga |
565 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| || |||| ||| |||||||||| ||||||||||||||||||||||||| |||||||| ||||| |
|
|
| T |
6425430 |
tgtagacataccttccaagtgaaacaccggctccattggtgtactatagacaagaagagttgaagactttaagaggagatggaaaaggagagcgcaagga |
6425331 |
T |
|
| Q |
566 |
atgggaaagaatatatgattatgatgtctacaatgatttgggtgatgtggacaagaacgctagtttggctcgtcctgttgttggaggatctagcaccctc |
665 |
Q |
| |
|
||||||||| || |||||||| ||||||||||||||||||||||| ||| ||| ||| |||| |||||| ||| |||||||||| |||||| | |
|
|
| T |
6425330 |
atgggaaaggatctatgattacgatgtctacaatgatttgggtgagcctgactcgaaacctaccttgggtcgtccagttcttggaggatcgagcaccttg |
6425231 |
T |
|
| Q |
666 |
ccttaccctcgaagagggaggaccggcaggaaagcagct |
704 |
Q |
| |
|
|||||||||||||| ||||| || ||||| ||| ||||| |
|
|
| T |
6425230 |
ccttaccctcgaagggggagaacaggcagaaaaccagct |
6425192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 102; E-Value: 5e-50
Query Start/End: Original strand, 468 - 737
Target Start/End: Complemental strand, 6333322 - 6333053
Alignment:
| Q |
468 |
tagacataccttccaagtgaaacaccagctcctttagtgttctacggacaagaagaattgaagactttaagaggagatggaactggagagcgtaaggaat |
567 |
Q |
| |
|
||||| ||||||||||| |||||||||||||| ||||| | |||| ||||||||||||||||||||||||||||||||||||| || ||||| || |||| |
|
|
| T |
6333322 |
tagacgtaccttccaagcgaaacaccagctccattagtctactacagacaagaagaattgaagactttaagaggagatggaacgggtgagcgcaaagaat |
6333223 |
T |
|
| Q |
568 |
gggaaagaatatatgattatgatgtctacaatgatttgggtgatgtggacaagaacgctagtttggctcgtcctgttgttggaggatctagcaccctccc |
667 |
Q |
| |
|
||| || || ||||| || ||||| |||||||| ||||||||| |||||||| | || ||||||||||| |||||||||||||| | | | | || |
|
|
| T |
6333222 |
cggataggatctatgactacgatgtttacaatgacttgggtgatcctgacaagaaagaaagcttggctcgtcccgttgttggaggatccaataacttgcc |
6333123 |
T |
|
| Q |
668 |
ttaccctcgaagagggaggaccggcaggaaagcagctcgtaaaggttataaactttatgttctatcttaa |
737 |
Q |
| |
|
|||||||||||| ||||| |||||||||||| ||| |||||| |||||||||||| |||||||||| |
|
|
| T |
6333122 |
ttaccctcgaagggggagaaccggcaggaaacatgctaaaaaaggtgataaactttatgctctatcttaa |
6333053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 424 - 608
Target Start/End: Complemental strand, 6411442 - 6411258
Alignment:
| Q |
424 |
ttctcttttccaaaaacttgacacaatcaatgactacaattttgtagacataccttccaagtgaaacaccagctcctttagtgttctacggacaagaaga |
523 |
Q |
| |
|
||||||||| ||||||||||||| | ||||| || |||| ||||| |||||||||||||| || ||||| || ||||||| |||| ||||||| |
|
|
| T |
6411442 |
ttctctttttcaaaaacttgacagcaccaatggttaaaattatgtaggcataccttccaagtcaagcaccacaaccattagtgtactacatcaaagaaga |
6411343 |
T |
|
| Q |
524 |
attgaagactttaagaggagatggaactggagagcgtaaggaatgggaaagaatatatgattatgatgtctacaatgatttgggt |
608 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
6411342 |
attgaagactttaagaggagatggaactggagagcgtaaggtatgggacagaatatatgattatgatgtctacaatgatttgggt |
6411258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 892 - 1046
Target Start/End: Complemental strand, 6353392 - 6353237
Alignment:
| Q |
892 |
ttctaaagcatacattgttattgtatttgtgaacagatcctaagagtgagagtcgaagtgacactgtttacctcccaagggatgaatcatttggacacac |
991 |
Q |
| |
|
||||||| |||| ||||||||| ||| | |||||||||||||||||||||| ||||||| |||||||||||| ||||| |||||||| ||||||||||| |
|
|
| T |
6353392 |
ttctaaaacatatattgttattatatatttgaacagatcctaagagtgagactcgaagtcccactgtttaccttccaagagatgaatcttttggacacac |
6353293 |
T |
|
| Q |
992 |
aaagtcatcagactttcttgttcacatactcaaatctgcatctc-aaatgtcatac |
1046 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||| |
|
|
| T |
6353292 |
aaagtcatcagactttcttgtttacatactcaaatcagcatctcaaaatgtcatac |
6353237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 468 - 718
Target Start/End: Complemental strand, 6322755 - 6322505
Alignment:
| Q |
468 |
tagacataccttccaagtgaaacaccagctcctttagtgttctacggacaagaagaattgaagactttaagaggagatggaactggagagcgtaaggaat |
567 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||| | ||| || |||||||||||||||||||||||||||||||||| || |||| |||||| |
|
|
| T |
6322755 |
tagacataccttccaagtgaaacaccagctccattagtctactatagagaagaagaattgaagactttaagaggagatggaacgggtcagcgcaaggaac |
6322656 |
T |
|
| Q |
568 |
gggaaagaatatatgattatgatgtctacaatgatttgggtgatgtggacaagaacgctagtttggctcgtcctgttgttggaggatctagcaccctccc |
667 |
Q |
| |
|
|| ||||| ||||| || ||||| |||||||| ||||||||| |||||| |||| ||||||||||| ||| |||||||||| |||| | || |
|
|
| T |
6322655 |
acgatagaatctatgactacgatgtttacaatgacttgggtgatcctgacaagtacgcacacttggctcgtcccgttattggaggatccgacaccttgcc |
6322556 |
T |
|
| Q |
668 |
ttaccctcgaagagggaggaccggcaggaaagcagctcgtaaaggttataa |
718 |
Q |
| |
|
|||||||||||| || || |||||||||||| ||||| ||||||||||| |
|
|
| T |
6322555 |
ttaccctcgaaggggcagaaccggcaggaaaccagctaaaaaaggttataa |
6322505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 86; E-Value: 2e-40
Query Start/End: Original strand, 230 - 359
Target Start/End: Complemental strand, 6290855 - 6290726
Alignment:
| Q |
230 |
gaattcttccttgtcagcttgactcttgaagatgttccaaaccatggaaccatcaactttgtttgcaactcatgggtttacaacgctaaaaattacaaaa |
329 |
Q |
| |
|
|||||||| ||||| || ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||| |||| ||||||| |
|
|
| T |
6290855 |
gaattctttcttgtaagtttgacccttgaagatgttcccaaccatggaaccatcaactttgtttgcaactcatggatttacaatgctcaaaactacaaaa |
6290756 |
T |
|
| Q |
330 |
ctaaacgcattttctttgccaacaaggtaa |
359 |
Q |
| |
|
|| ||||||| ||||||||||||||||||| |
|
|
| T |
6290755 |
ctgaacgcatcttctttgccaacaaggtaa |
6290726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 86; E-Value: 2e-40
Query Start/End: Original strand, 164 - 359
Target Start/End: Complemental strand, 6333595 - 6333403
Alignment:
| Q |
164 |
tttgaatgggacaatgacatgggaactccaggagctttttatattgagaattatctgcaaggtggtgaattcttccttgtcagcttgactcttgaagatg |
263 |
Q |
| |
|
||||||||||||| ||| ||||||| ||||||||| ||||||||||| |||| ||| ||| | ||||||||||||| || ||||| ||||||||| |
|
|
| T |
6333595 |
tttgaatgggacagtgagatgggaattccaggagcattttatattgaaaatttcatgctaggag---aattcttccttgtaagtttgacgcttgaagata |
6333499 |
T |
|
| Q |
264 |
ttccaaaccatggaaccatcaactttgtttgcaactcatgggtttacaacgctaaaaattacaaaactaaacgcattttctttgccaacaaggtaa |
359 |
Q |
| |
|
|||| | |||||||||||||||||||||||||||||||||| ||||||| |||||||| || ||||| |||||||| |||||| | |||||||||| |
|
|
| T |
6333498 |
ttcccatccatggaaccatcaactttgtttgcaactcatggatttacaatgctaaaaagtataaaacgaaacgcatcttctttacgaacaaggtaa |
6333403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 85; E-Value: 6e-40
Query Start/End: Original strand, 466 - 610
Target Start/End: Complemental strand, 6371444 - 6371300
Alignment:
| Q |
466 |
tgtagacataccttccaagtgaaacaccagctcctttagtgttctacggacaagaagaattgaagactttaagaggagatggaactggagagcgtaagga |
565 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| ||||| | |||| |||||||||| |||||||||||||||||||||||||| || ||||| || || |
|
|
| T |
6371444 |
tgtagacataccttctaagtgaaacaccagctccattagtctactacagacaagaagagttgaagactttaagaggagatggaacgggtgagcgcaaaga |
6371345 |
T |
|
| Q |
566 |
atgggaaagaatatatgattatgatgtctacaatgatttgggtga |
610 |
Q |
| |
|
|||||| || || ||||| || ||||||||||||||||||||||| |
|
|
| T |
6371344 |
atgggataggatctatgactacgatgtctacaatgatttgggtga |
6371300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 164 - 359
Target Start/End: Complemental strand, 6276170 - 6275978
Alignment:
| Q |
164 |
tttgaatgggacaatgacatgggaactccaggagctttttatattgagaattatctgcaaggtggtgaattcttccttgtcagcttgactcttgaagatg |
263 |
Q |
| |
|
||||||||||| | ||| ||||||| ||||||||| |||||||||||||||| ||| ||| | ||||||| ||||| || || || ||||||||| |
|
|
| T |
6276170 |
tttgaatgggatagtgagatgggaattccaggagcattttatattgagaatttcatgctaggag---aattctttcttgtaagtttaacacttgaagata |
6276074 |
T |
|
| Q |
264 |
ttccaaaccatggaaccatcaactttgtttgcaactcatgggtttacaacgctaaaaattacaaaactaaacgcattttctttgccaacaaggtaa |
359 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||| ||||||| | ||| ||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
6276073 |
ttcctaaccatggaaccatcaactttgtttgcaactcatggatttacaattgtcgaaagtacaaaactgaacgcattttctttgccaacaaggtaa |
6275978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 80; E-Value: 6e-37
Query Start/End: Original strand, 143 - 359
Target Start/End: Complemental strand, 6392653 - 6392437
Alignment:
| Q |
143 |
caaaatgctttcagtattgaatttgaatggga---caatgacatgggaactccaggagctttttatattgagaattatctgcaaggtggtgaattcttcc |
239 |
Q |
| |
|
|||||||||||||||||| | ||||||||||| |||| ||||||||| |||||||||||| ||| || |||||| | ||||| || || |||||| |
|
|
| T |
6392653 |
caaaatgctttcagtattcattttgaatgggatcccaatcacatgggaattccaggagctttctatgttaagaattttacgcaagatg---aaatcttcc |
6392557 |
T |
|
| Q |
240 |
ttgtcagcttgactcttgaagatgttccaaaccatggaaccatcaactttgtttgcaactcatgggtttacaacgctaaaaattacaaaactaaacgcat |
339 |
Q |
| |
|
|||| || ||||| |||||||||||| || ||||| ||||| |||||| |||||||||||||| ||||||| ||| |||| ||| ||||| ||||||| |
|
|
| T |
6392556 |
ttgtgagtttgacccttgaagatgttgaaagccatgaaaccacaaactttatttgcaactcatggatttacaatgctgaaaagtaccaaactgaacgcat |
6392457 |
T |
|
| Q |
340 |
tttctttgccaacaaggtaa |
359 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
6392456 |
tttctttgccaacaaggtaa |
6392437 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 80; E-Value: 6e-37
Query Start/End: Original strand, 143 - 359
Target Start/End: Complemental strand, 6411793 - 6411577
Alignment:
| Q |
143 |
caaaatgctttcagtattgaatttgaatggga---caatgacatgggaactccaggagctttttatattgagaattatctgcaaggtggtgaattcttcc |
239 |
Q |
| |
|
|||||||||||||||||| | ||||||||||| |||| ||||||||| |||||||||||| ||| || |||||| | ||||| || || |||||| |
|
|
| T |
6411793 |
caaaatgctttcagtattcattttgaatgggatcccaatcacatgggaattccaggagctttctatgttaagaattttacgcaagatg---aaatcttcc |
6411697 |
T |
|
| Q |
240 |
ttgtcagcttgactcttgaagatgttccaaaccatggaaccatcaactttgtttgcaactcatgggtttacaacgctaaaaattacaaaactaaacgcat |
339 |
Q |
| |
|
|||| || ||||| |||||||||||| || ||||| ||||| |||||| |||||||||||||| ||||||| ||| |||| ||| ||||| ||||||| |
|
|
| T |
6411696 |
ttgtgagtttgacccttgaagatgttgaaagccatgaaaccacaaactttatttgcaactcatggatttacaatgctgaaaagtaccaaactgaacgcat |
6411597 |
T |
|
| Q |
340 |
tttctttgccaacaaggtaa |
359 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
6411596 |
tttctttgccaacaaggtaa |
6411577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 70; E-Value: 6e-31
Query Start/End: Original strand, 230 - 359
Target Start/End: Complemental strand, 6323082 - 6322953
Alignment:
| Q |
230 |
gaattcttccttgtcagcttgactcttgaagatgttccaaaccatggaaccatcaactttgtttgcaactcatgggtttacaacgctaaaaattacaaaa |
329 |
Q |
| |
|
|||||||||||||| || ||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||| ||| | || || |||| |
|
|
| T |
6323082 |
gaattcttccttgtaagtttgacacttgaagatattccaaaccatggaaccatcaactttgtatgcaactcatggatttacagtgctgacaagtataaaa |
6322983 |
T |
|
| Q |
330 |
ctaaacgcattttctttgccaacaaggtaa |
359 |
Q |
| |
|
| |||||||| ||||| ||||||||||||| |
|
|
| T |
6322982 |
cgaaacgcatcttcttcgccaacaaggtaa |
6322953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #22
Raw Score: 67; E-Value: 4e-29
Query Start/End: Original strand, 924 - 1038
Target Start/End: Complemental strand, 6425034 - 6424920
Alignment:
| Q |
924 |
acagatcctaagagtgagagtcgaagtgacactgtttacctcccaagggatgaatcatttggacacacaaagtcatcagactttcttgttcacatactca |
1023 |
Q |
| |
|
||||||||||||||||||||||| || | |||||||||||| ||||| ||||| ||||||||||||||||||| ||||||||||||| | |||||||| |
|
|
| T |
6425034 |
acagatcctaagagtgagagtcggagcggcactgtttaccttccaagagatgaggcatttggacacacaaagtcttcagactttcttgctttcatactca |
6424935 |
T |
|
| Q |
1024 |
aatctgcatctcaaa |
1038 |
Q |
| |
|
|||| |||||||||| |
|
|
| T |
6424934 |
aatcagcatctcaaa |
6424920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #23
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 480 - 610
Target Start/End: Complemental strand, 6265057 - 6264927
Alignment:
| Q |
480 |
ccaagtgaaacaccagctcctttagtgttctacggacaagaagaattgaagactttaagaggagatggaactggagagcgtaaggaatgggaaagaatat |
579 |
Q |
| |
|
|||||||||||||| ||||| | || | ||| ||||| ||| |||||||||||||||||||||||||| || ||||| || |||||||| ||| | | |
|
|
| T |
6265057 |
ccaagtgaaacacctgctccacttgtctactatagacaattagagttgaagactttaagaggagatggaacgggggagcgcaaagaatgggacagagttt |
6264958 |
T |
|
| Q |
580 |
atgattatgatgtctacaatgatttgggtga |
610 |
Q |
| |
|
||||||||||||| ||||||||||||||||| |
|
|
| T |
6264957 |
atgattatgatgtttacaatgatttgggtga |
6264927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #24
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 919 - 1036
Target Start/End: Complemental strand, 7460263 - 7460146
Alignment:
| Q |
919 |
tgtgaacagatcctaagagtgagagtcgaagtgacactgtttacctcccaagggatgaatcatttggacacacaaagtcatcagactttcttgttcacat |
1018 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| || ||||| | ||||| |||||||||||||| ||| |||||||| |||||||||| | | | |
|
|
| T |
7460263 |
tgtgaacagatcctaagagtgagagtcgaagtgacgctatttacgttccaagagatgaatcatttggtcacttgaagtcatctgactttcttggttatgt |
7460164 |
T |
|
| Q |
1019 |
actcaaatctgcatctca |
1036 |
Q |
| |
|
||||||||| ||| |||| |
|
|
| T |
7460163 |
actcaaatcagcaactca |
7460146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #25
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 228 - 359
Target Start/End: Complemental strand, 6371664 - 6371533
Alignment:
| Q |
228 |
gtgaattcttccttgtcagcttgactcttgaagatgttccaaaccatggaaccatcaactttgtttgcaactcatgggtttacaacgctaaaaattacaa |
327 |
Q |
| |
|
||||| |||||||||| || ||||| ||| | ||||||||||| |||||||||||||||||| |||||||||||| ||||||| |||||||| || | |
|
|
| T |
6371664 |
gtgaactcttccttgtgagtttgacccttaatgatgttccaaatcatggaaccatcaactttaactgcaactcatggatttacaatgctaaaaactatca |
6371565 |
T |
|
| Q |
328 |
aactaaacgcattttctttgccaacaaggtaa |
359 |
Q |
| |
|
|| | ||||| |||||| |||||||||||| |
|
|
| T |
6371564 |
ctctgagcgcatcttctttaccaacaaggtaa |
6371533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #26
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 237 - 361
Target Start/End: Complemental strand, 6265599 - 6265475
Alignment:
| Q |
237 |
tccttgtcagcttgactcttgaagatgttccaaaccatggaaccatcaactttgtttgcaactcatgggtttacaacgctaaaaattacaaaactaaacg |
336 |
Q |
| |
|
||||||| || ||||||||||| ||| | |||||| ||||||||| |||||||||||||||| ||||||||||| || ||||| ||| |||| | || |
|
|
| T |
6265599 |
tccttgtgagtttgactcttgatgatatcccaaacgttggaaccattcactttgtttgcaactcgtgggtttacaatgcgaaaaactacctaactgatcg |
6265500 |
T |
|
| Q |
337 |
cattttctttgccaacaaggtaaga |
361 |
Q |
| |
|
|||||||| |||||||| |||||| |
|
|
| T |
6265499 |
tattttcttcgccaacaatgtaaga |
6265475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 936 - 1038
Target Start/End: Complemental strand, 6332956 - 6332854
Alignment:
| Q |
936 |
agtgagagtcgaagtgacactgtttacctcccaagggatgaatcatttggacacacaaagtcatcagactttcttgttcacatactcaaatctgcatctc |
1035 |
Q |
| |
|
||||||||||| || ||| ||||||| | ||||| |||||||||||||| ||| ||||| ||||||||||||||| | ||||| ||||| ||||||| |
|
|
| T |
6332956 |
agtgagagtcggagcgactttgtttacattccaagagatgaatcatttggccacttgaagtcttcagactttcttgtttatatactgaaatcagcatctc |
6332857 |
T |
|
| Q |
1036 |
aaa |
1038 |
Q |
| |
|
||| |
|
|
| T |
6332856 |
aaa |
6332854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 517 - 607
Target Start/End: Complemental strand, 6458352 - 6458262
Alignment:
| Q |
517 |
aagaagaattgaagactttaagaggagatggaactggagagcgtaaggaatgggaaagaatatatgattatgatgtctacaatgatttggg |
607 |
Q |
| |
|
||||||| ||| ||||| ||||||||||||||||||||||||| || ||| ||| ||| | |||||||||||| | || ||||||||||| |
|
|
| T |
6458352 |
aagaagagttgcagactctaagaggagatggaactggagagcgcaaagaagcggatagagtttatgattatgatatttataatgatttggg |
6458262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 912 - 1046
Target Start/End: Complemental strand, 6275527 - 6275394
Alignment:
| Q |
912 |
ttgtatttgtgaacagatcctaagagtgagagtcgaagtgacactgtttacctcccaagggatgaatcatttggacacacaaagtcatcagactttcttg |
1011 |
Q |
| |
|
||||||||||| |||||||||| |||||||| || || || | |||| || ||||| |||||||||||||| ||| ||||| ||||| ||||||| |
|
|
| T |
6275527 |
ttgtatttgtg--cagatcctaaaagtgagagacggagcgagtatatttatcttccaagagatgaatcatttggtcacttgaagtcttcagattttcttg |
6275430 |
T |
|
| Q |
1012 |
ttcacatactcaaatctgcatctc-aaatgtcatac |
1046 |
Q |
| |
|
|| ||||||||||||| | ||||| ||||||||||| |
|
|
| T |
6275429 |
tttacatactcaaatcagtatctcaaaatgtcatac |
6275394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 919 - 1038
Target Start/End: Complemental strand, 6322389 - 6322270
Alignment:
| Q |
919 |
tgtgaacagatcctaagagtgagagtcgaagtgacactgtttacctcccaagggatgaatcatttggacacacaaagtcatcagactttcttgttcacat |
1018 |
Q |
| |
|
|||||||||||||||| |||||||| || ||| ||||||| | ||||| |||||| ||||||| ||| ||||| ||||| ||||||||| |||| |
|
|
| T |
6322389 |
tgtgaacagatcctaaaagtgagagacgggacgactttgtttacgttccaagagatgaagcatttggtcacttgaagtcttcagattttcttgtttacat |
6322290 |
T |
|
| Q |
1019 |
actcaaatctgcatctcaaa |
1038 |
Q |
| |
|
||||||||| || ||||||| |
|
|
| T |
6322289 |
actcaaatcagcttctcaaa |
6322270 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 517 - 602
Target Start/End: Complemental strand, 6452259 - 6452174
Alignment:
| Q |
517 |
aagaagaattgaagactttaagaggagatggaactggagagcgtaaggaatgggaaagaatatatgattatgatgtctacaatgat |
602 |
Q |
| |
|
||||||| ||| ||| | |||||||||||||||| ||||| || || |||||||| || ||||| ||||||||||| || |||||| |
|
|
| T |
6452259 |
aagaagagttgcagaatctaagaggagatggaaccggagaacgcaaagaatgggataggatatacgattatgatgtttataatgat |
6452174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 6265711 - 6265663
Alignment:
| Q |
122 |
ttgccaacattgggagataagcaaaatgctttcagtattgaatttgaat |
170 |
Q |
| |
|
|||||||||||||||||||| |||| |||||||| ||||||||||||| |
|
|
| T |
6265711 |
ttgccaacattgggagataaacaaacagctttcagcattgaatttgaat |
6265663 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 921 - 1037
Target Start/End: Complemental strand, 6289943 - 6289827
Alignment:
| Q |
921 |
tgaacagatcctaagagtgagagtcgaagtgacactgtttacctcccaagggatgaatcatttggacacacaaagtcatcagactttcttgttcacatac |
1020 |
Q |
| |
|
|||||||||||||| ||||||||||| | | | ||||||| | ||||| ||||||||||||| |||| ||||| ||||| ||||||| | || ||| |
|
|
| T |
6289943 |
tgaacagatcctaaaagtgagagtcggaacggctttgtttacattccaagagatgaatcatttgatcacaagaagtcttcagaatttcttgataacctac |
6289844 |
T |
|
| Q |
1021 |
tcaaatctgcatctcaa |
1037 |
Q |
| |
|
| ||||| ||||||||| |
|
|
| T |
6289843 |
tgaaatcagcatctcaa |
6289827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 858 - 899
Target Start/End: Complemental strand, 6353447 - 6353406
Alignment:
| Q |
858 |
tttttgttgatacaaatgtttactctgcttatgattctaaag |
899 |
Q |
| |
|
|||| |||||| ||||||||||| |||||||||||||||||| |
|
|
| T |
6353447 |
ttttggttgatccaaatgtttaccctgcttatgattctaaag |
6353406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 67; Significance: 4e-29; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 67; E-Value: 4e-29
Query Start/End: Original strand, 469 - 611
Target Start/End: Original strand, 9603035 - 9603177
Alignment:
| Q |
469 |
agacataccttccaagtgaaacaccagctcctttagtgttctacggacaagaagaattgaagactttaagaggagatggaactggagagcgtaaggaatg |
568 |
Q |
| |
|
||||||| ||||||||| ||||||||||||| ||||| | |||| |||||||||||||| | | | ||||||||||||| |||||| | || || ||||| |
|
|
| T |
9603035 |
agacatatcttccaagtcaaacaccagctccattagtctactacagacaagaagaattgcaaaatctaagaggagatggtactggacaacgaaaagaatg |
9603134 |
T |
|
| Q |
569 |
ggaaagaatatatgattatgatgtctacaatgatttgggtgat |
611 |
Q |
| |
|
||||||| | |||||||||||||||||||||||| | |||||| |
|
|
| T |
9603135 |
ggaaagagtttatgattatgatgtctacaatgatcttggtgat |
9603177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 61; Significance: 1e-25; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 472 - 604
Target Start/End: Complemental strand, 42694526 - 42694394
Alignment:
| Q |
472 |
cataccttccaagtgaaacaccagctcctttagtgttctacggacaagaagaattgaagactttaagaggagatggaactggagagcgtaaggaatggga |
571 |
Q |
| |
|
|||| ||||| ||||||||||| ||||| ||||| || || ||||||||||||| | |||||||||||||||||| ||||| || || |||||||| |
|
|
| T |
42694526 |
catatcttcctagtgaaacaccggctccattagtccattatagagaagaagaattgaacaatttaagaggagatggaacaggagaacgcaaagaatggga |
42694427 |
T |
|
| Q |
572 |
aagaatatatgattatgatgtctacaatgattt |
604 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| |
|
|
| T |
42694426 |
aagaatctatgattatgatgtctacaatgattt |
42694394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 251 - 358
Target Start/End: Original strand, 42686798 - 42686905
Alignment:
| Q |
251 |
actcttgaagatgttccaaaccatggaaccatcaactttgtttgcaactcatgggtttacaacgctaaaaattacaaaactaaacgcattttctttgcca |
350 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||| ||| |||||||| | ||||||||||||||||| |
|
|
| T |
42686798 |
actcttgaagatgttccaaaccatggaaccattcgatttgtatgcaactcttgggtttacaacgcaaaactttacaaaagtccacgcattttctttgcca |
42686897 |
T |
|
| Q |
351 |
acaaggta |
358 |
Q |
| |
|
|||||||| |
|
|
| T |
42686898 |
acaaggta |
42686905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 358
Target Start/End: Complemental strand, 42694816 - 42694694
Alignment:
| Q |
236 |
ttccttgtcagcttgactcttgaagatgttccaaaccatggaaccatcaactttgtttgcaactcatgggtttacaacgctaaaaattacaaaactaaac |
335 |
Q |
| |
|
|||||||| || |||||||||||||| ||||||| ||||||| |||| ||||||| |||||||| ||| |||| || || ||| | ||||| | | | |
|
|
| T |
42694816 |
ttccttgtgagtttgactcttgaagacattccaaatcatggaagcatctactttgtatgcaactcctggatttataatgccaaacaccacaaacttgacc |
42694717 |
T |
|
| Q |
336 |
gcattttctttgccaacaaggta |
358 |
Q |
| |
|
|||||||||||||||| |||||| |
|
|
| T |
42694716 |
gcattttctttgccaataaggta |
42694694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 48; Significance: 8e-18; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 472 - 607
Target Start/End: Original strand, 36743886 - 36744021
Alignment:
| Q |
472 |
cataccttccaagtgaaacaccagctcctttagtgttctacggacaagaagaattgaagactttaagaggagatggaactggagagcgtaaggaatggga |
571 |
Q |
| |
|
||||||||||| ||||| |||||||| |||| |||| |||| | ||||||| | |||||||| ||||||||||| | | ||||| |||||||||| |
|
|
| T |
36743886 |
cataccttccacatgaaatgccagctccactagttaactacagacatgtagaattggatactttaaggggagatggaacagcaaagcgtgaggaatggga |
36743985 |
T |
|
| Q |
572 |
aagaatatatgattatgatgtctacaatgatttggg |
607 |
Q |
| |
|
||||| |||||||||||||| |||||||||||||| |
|
|
| T |
36743986 |
cagaatctatgattatgatgtttacaatgatttggg |
36744021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 534 - 602
Target Start/End: Original strand, 35722304 - 35722372
Alignment:
| Q |
534 |
ttaagaggagatggaactggagagcgtaaggaatgggaaagaatatatgattatgatgtctacaatgat |
602 |
Q |
| |
|
||||||||| ||||| |||||||||||| ||| || ||||| |||||||||||||||||||||||| |
|
|
| T |
35722304 |
ttaagaggaaatggagaaggagagcgtaagaaatcagacagaatctatgattatgatgtctacaatgat |
35722372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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