View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5723_high_11 (Length: 345)

Name: NF5723_high_11
Description: NF5723
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5723_high_11
NF5723_high_11
[»] chr5 (10 HSPs)
chr5 (13-266)||(23287259-23287519)
chr5 (124-198)||(32630720-32630794)
chr5 (292-324)||(23287202-23287234)
chr5 (143-183)||(41558654-41558694)
chr5 (124-159)||(18162055-18162090)
chr5 (117-202)||(11596438-11596521)
chr5 (121-175)||(38749571-38749625)
chr5 (131-188)||(17925167-17925224)
chr5 (121-161)||(28296325-28296365)
chr5 (117-189)||(28588668-28588740)
[»] chr1 (15 HSPs)
chr1 (117-202)||(29163362-29163447)
chr1 (117-189)||(19637761-19637833)
chr1 (117-189)||(38078655-38078727)
chr1 (117-188)||(7988446-7988517)
chr1 (117-176)||(26462652-26462711)
chr1 (123-177)||(40747779-40747833)
chr1 (144-189)||(17007955-17008000)
chr1 (131-188)||(2288164-2288219)
chr1 (132-186)||(31667433-31667487)
chr1 (117-175)||(33940303-33940361)
chr1 (144-190)||(50195458-50195504)
chr1 (119-188)||(18556021-18556090)
chr1 (130-175)||(29415754-29415799)
chr1 (117-189)||(13436451-13436523)
chr1 (117-189)||(19058850-19058922)
[»] chr2 (15 HSPs)
chr2 (125-181)||(16630796-16630852)
chr2 (117-198)||(43585990-43586071)
chr2 (125-189)||(18570973-18571037)
chr2 (117-188)||(30298444-30298513)
chr2 (119-186)||(31026690-31026757)
chr2 (124-183)||(40681982-40682041)
chr2 (130-188)||(23406874-23406932)
chr2 (123-161)||(30563408-30563446)
chr2 (131-181)||(44605141-44605191)
chr2 (123-168)||(4332925-4332970)
chr2 (144-189)||(5040754-5040799)
chr2 (131-168)||(12933751-12933788)
chr2 (124-189)||(18255974-18256039)
chr2 (117-186)||(37558970-37559039)
chr2 (123-187)||(21091722-21091786)
[»] chr3 (8 HSPs)
chr3 (119-175)||(47775720-47775776)
chr3 (117-188)||(24205037-24205107)
chr3 (143-202)||(35222957-35223016)
chr3 (121-183)||(19323448-19323510)
chr3 (123-188)||(1502573-1502638)
chr3 (130-183)||(9210825-9210878)
chr3 (132-189)||(49505148-49505205)
chr3 (131-183)||(54441265-54441317)
[»] chr7 (13 HSPs)
chr7 (125-188)||(12278836-12278898)
chr7 (122-184)||(2525843-2525905)
chr7 (117-198)||(5937406-5937487)
chr7 (117-189)||(26733297-26733369)
chr7 (144-183)||(12843175-12843214)
chr7 (132-187)||(24146824-24146879)
chr7 (143-198)||(25956464-25956519)
chr7 (124-183)||(35238184-35238243)
chr7 (132-189)||(3721101-3721158)
chr7 (131-188)||(4909158-4909215)
chr7 (132-189)||(21880160-21880217)
chr7 (130-175)||(44172898-44172943)
chr7 (124-176)||(38134413-38134465)
[»] chr8 (15 HSPs)
chr8 (132-202)||(3025559-3025629)
chr8 (117-175)||(9936807-9936865)
chr8 (117-189)||(31236571-31236643)
chr8 (117-188)||(34897078-34897149)
chr8 (117-188)||(42874515-42874586)
chr8 (117-183)||(22651969-22652035)
chr8 (117-175)||(27547988-27548046)
chr8 (124-166)||(30068045-30068087)
chr8 (135-181)||(32691754-32691800)
chr8 (125-166)||(16869732-16869773)
chr8 (117-198)||(20873062-20873143)
chr8 (125-182)||(33382020-33382077)
chr8 (117-161)||(5307054-5307097)
chr8 (132-176)||(8798838-8798882)
chr8 (122-182)||(31548294-31548354)
[»] chr6 (20 HSPs)
chr6 (117-183)||(9024176-9024242)
chr6 (146-183)||(602664-602701)
chr6 (124-189)||(28715295-28715360)
chr6 (117-202)||(33001270-33001355)
chr6 (117-189)||(19040345-19040417)
chr6 (117-168)||(7625115-7625166)
chr6 (117-188)||(34867856-34867927)
chr6 (143-189)||(7377998-7378044)
chr6 (117-159)||(12086369-12086411)
chr6 (117-183)||(19369810-19369876)
chr6 (123-200)||(30851601-30851676)
chr6 (144-202)||(34595154-34595212)
chr6 (121-182)||(4859114-4859175)
chr6 (117-202)||(9658872-9658957)
chr6 (117-166)||(12627833-12627882)
chr6 (117-166)||(13211298-13211347)
chr6 (122-175)||(32728365-32728418)
chr6 (117-189)||(426508-426580)
chr6 (143-187)||(6751878-6751922)
chr6 (132-188)||(7265588-7265644)
[»] chr4 (12 HSPs)
chr4 (117-159)||(34515898-34515940)
chr4 (143-188)||(11135289-11135334)
chr4 (124-181)||(18513243-18513300)
chr4 (117-198)||(23292971-23293052)
chr4 (144-202)||(12797319-12797377)
chr4 (117-159)||(20743302-20743344)
chr4 (122-176)||(23915127-23915181)
chr4 (121-166)||(5654608-5654653)
chr4 (123-168)||(32910550-32910595)
chr4 (124-176)||(14465301-14465353)
chr4 (123-187)||(21945502-21945566)
chr4 (143-183)||(22799893-22799933)
[»] scaffold0136 (1 HSPs)
scaffold0136 (123-183)||(3849-3909)
[»] scaffold0598 (1 HSPs)
scaffold0598 (117-159)||(8077-8119)
[»] scaffold0122 (1 HSPs)
scaffold0122 (117-183)||(8659-8725)
[»] scaffold0022 (1 HSPs)
scaffold0022 (121-175)||(99890-99944)
[»] scaffold0110 (1 HSPs)
scaffold0110 (117-181)||(28843-28907)
[»] scaffold0083 (1 HSPs)
scaffold0083 (150-202)||(45511-45563)


Alignment Details
Target: chr5 (Bit Score: 202; Significance: 1e-110; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 13 - 266
Target Start/End: Complemental strand, 23287519 - 23287259
Alignment:
Q  13 taggaaaaacagatcaaagaatcagtcactgtctgattcttcaacaaagctatagaaatgggaaactgacataactaccaaccaatgaaagacatactcc 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  23287519 taggaaaaacagatcaaagaatcagtcactgtctgattcttcaacaaagctatagaaatgggaaactgacataactaacaaccaatgaaacacatactcc 23287420  T
Q  113 tcacacacgtcgacacggataataatttaggaaaatgacataattcaatataattacatgtgtcag------tgtcggacacggtacgtgtctgacctca 206  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||      |||||||||| ||||| |||||||||||    
T  23287419 tcacacacgtcgacaccaataataatttaggaaaatgacataattcaatataattatatgtgtcagtgtcagtgtcggacactgtacgcgtctgacctca 23287320  T
Q  207 t-cctcatgccttatccgaggagtatatgtgcttcaaagctacaaactaacatttacatat 266  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23287319 tccctcatgccttatccgaggagtatatgtgcttcaaagctacaaactaacatttacatat 23287259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 198
Target Start/End: Complemental strand, 32630794 - 32630720
Alignment:
Q  124 gacacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcggacacggtacgtgtc 198  Q
    ||||| |||||||||||  |||||| | |||||||||| |||||| |||||||||||||||| |||  |||||||    
T  32630794 gacaccgataataatttgagaaaattatataattcaatgtaattatatgtgtcagtgtcggatacgacacgtgtc 32630720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 23287234 - 23287202
Alignment:
Q  292 tggaaacctacaatttgaagcctaacattggtc 324  Q
    |||||||||||||||||||||||||||||||||    
T  23287234 tggaaacctacaatttgaagcctaacattggtc 23287202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 183
Target Start/End: Complemental strand, 41558694 - 41558654
Alignment:
Q  143 gaaaatgacataattcaatataattacatgtgtcagtgtcg 183  Q
    ||||||||||||||||||| |||||| ||||||||||||||    
T  41558694 gaaaatgacataattcaatgtaattaaatgtgtcagtgtcg 41558654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 124 - 159
Target Start/End: Original strand, 18162055 - 18162090
Alignment:
Q  124 gacacggataataatttaggaaaatgacataattca 159  Q
    |||||||||||||||||| |||||||||||||||||    
T  18162055 gacacggataataatttaagaaaatgacataattca 18162090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 202
Target Start/End: Complemental strand, 11596521 - 11596438
Alignment:
Q  117 acacgtcgacacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcggacacggtacgtgtctgac 202  Q
    ||||||||| || |||||||||||  ||||||||||||||||||| ||||  |||| ||| |||| ||||||| || || ||||||    
T  11596521 acacgtcgataccgataataatttgagaaaatgacataattcaatgtaat--catgcgtcggtgttggacacgatatgtatctgac 11596438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 38749625 - 38749571
Alignment:
Q  121 gtcgacacggataataatttaggaaaatgacataattcaatataattacatgtgt 175  Q
    |||||||| |||||||||||   |||||||||||||||||| |||||| ||||||    
T  38749625 gtcgacaccgataataatttgaaaaaatgacataattcaatgtaattatatgtgt 38749571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 188
Target Start/End: Complemental strand, 17925224 - 17925167
Alignment:
Q  131 ataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcggacac 188  Q
    ||||||||||| |||||| |||||||||||| |||| | ||||||| |||||| ||||    
T  17925224 ataataatttaagaaaatcacataattcaatgtaataatatgtgtcggtgtcgaacac 17925167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 161
Target Start/End: Original strand, 28296325 - 28296365
Alignment:
Q  121 gtcgacacggataataatttaggaaaatgacataattcaat 161  Q
    |||||||| |||||||||||  |||||||||||||||||||    
T  28296325 gtcgacaccgataataatttgagaaaatgacataattcaat 28296365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 189
Target Start/End: Complemental strand, 28588740 - 28588668
Alignment:
Q  117 acacgtcgacacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcggacacg 189  Q
    ||||| |||||| | |||||||||  |||||| |||||||||| | |||||| | ||||| ||||||||||||    
T  28588740 acacgccgacaccggtaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtcggacacg 28588668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 117 - 202
Target Start/End: Complemental strand, 29163447 - 29163362
Alignment:
Q  117 acacgtcgacacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcggacacggtacgtgtctgac 202  Q
    ||||| |||||| | ||| ||||||||||||| |||||||||||| |||||| ||||||| ||||||||||||  ||||| |||||    
T  29163447 acacgccgacaccgctaaaaatttaggaaaatcacataattcaatttaattatatgtgtcggtgtcggacacgacacgtgcctgac 29163362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 117 - 189
Target Start/End: Original strand, 19637761 - 19637833
Alignment:
Q  117 acacgtcgacacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcggacacg 189  Q
    |||| ||||||| |||||||||||| ||||||||||| ||||||| |||| | ||||||| ||||||||||||    
T  19637761 acacatcgacaccgataataatttaagaaaatgacattattcaatgtaatcatatgtgtcggtgtcggacacg 19637833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 117 - 189
Target Start/End: Complemental strand, 38078727 - 38078655
Alignment:
Q  117 acacgtcgacacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcggacacg 189  Q
    |||||||||||| | |||||||||   ||||| |||||||||||| |||||||| ||||| ||||||||||||    
T  38078727 acacgtcgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtcggacacg 38078655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 7988517 - 7988446
Alignment:
Q  117 acacgtcgacacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcggacac 188  Q
    |||||||||||| |||||||||||| |||| |||||||||||||| |||| | | ||||  |||||||||||    
T  7988517 acacgtcgacactgataataatttaagaaagtgacataattcaatgtaatcataagtgttggtgtcggacac 7988446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 176
Target Start/End: Complemental strand, 26462711 - 26462652
Alignment:
Q  117 acacgtcgacacggataataatttaggaaaatgacataattcaatataattacatgtgtc 176  Q
    |||||||||||| |||||||||||| |||||||| |||||| ||| |||| |||||||||    
T  26462711 acacgtcgacactgataataatttaagaaaatgaaataattgaatgtaatcacatgtgtc 26462652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 40747833 - 40747779
Alignment:
Q  123 cgacacggataataatttaggaaaatgacataattcaatataattacatgtgtca 177  Q
    ||||||||||||||||||  ||||||||||||||||||| |||||| | ||||||    
T  40747833 cgacacggataataatttgagaaaatgacataattcaatgtaattataggtgtca 40747779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 189
Target Start/End: Complemental strand, 17008000 - 17007955
Alignment:
Q  144 aaaatgacataattcaatataattacatgtgtcagtgtcggacacg 189  Q
    ||||| ||||||||||||||||| ||| ||||||||||||||||||    
T  17008000 aaaattacataattcaatataatcacaagtgtcagtgtcggacacg 17007955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 188
Target Start/End: Complemental strand, 2288219 - 2288164
Alignment:
Q  131 ataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcggacac 188  Q
    ||||||||||| |||||| |||||||||||| |||||  ||||||| |||||||||||    
T  2288219 ataataatttaagaaaatcacataattcaatgtaatt--atgtgtcggtgtcggacac 2288164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 186
Target Start/End: Original strand, 31667433 - 31667487
Alignment:
Q  132 taataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcggac 186  Q
    |||||||||  ||||||||||||||| ||| |||| ||||||||| |||||||||    
T  31667433 taataattttagaaaatgacataattaaatgtaatcacatgtgtcggtgtcggac 31667487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 175
Target Start/End: Original strand, 33940303 - 33940361
Alignment:
Q  117 acacgtcgacacggataataatttaggaaaatgacataattcaatataattacatgtgt 175  Q
    |||||| ||||| |||||||||||| |||||||| | |||||||| |||||| ||||||    
T  33940303 acacgtagacaccgataataatttatgaaaatgatacaattcaatgtaattatatgtgt 33940361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 190
Target Start/End: Complemental strand, 50195504 - 50195458
Alignment:
Q  144 aaaatgacataattcaatataattacatgtgtcagtgtcggacacgg 190  Q
    |||||||||||||| ||| |||| ||||||||| |||||||||||||    
T  50195504 aaaatgacataattgaatgtaatcacatgtgtcggtgtcggacacgg 50195458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 188
Target Start/End: Complemental strand, 18556090 - 18556021
Alignment:
Q  119 acgtcgacacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcggacac 188  Q
    ||||| |||| | ||||||||||  |||||||||||||| | | |||| ||||||||||||||| |||||    
T  18556090 acgtcaacaccggtaataatttaataaaatgacataattgactgtaatcacatgtgtcagtgtcagacac 18556021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 175
Target Start/End: Original strand, 29415754 - 29415799
Alignment:
Q  130 gataataatttaggaaaatgacataattcaatataattacatgtgt 175  Q
    |||||||||||| |||||||||||||||||  ||||| ||||||||    
T  29415754 gataataatttaagaaaatgacataattcagcataatcacatgtgt 29415799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 189
Target Start/End: Original strand, 13436451 - 13436523
Alignment:
Q  117 acacgtcgacacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcggacacg 189  Q
    ||||| |||||| | |||||||||| | |||| |||||||||| | |||||| ||||||  ||||||||||||    
T  13436451 acacgccgacactgctaataatttaaggaaatcacataattcagtgtaattatatgtgttggtgtcggacacg 13436523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 189
Target Start/End: Complemental strand, 19058922 - 19058850
Alignment:
Q  117 acacgtcgacacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcggacacg 189  Q
    ||||| |||||| | ||||||||||  || || |||||||||| | |||||||| ||||| ||||||||||||    
T  19058922 acacgccgacacagctaataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtcggacacg 19058850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 16630796 - 16630852
Alignment:
Q  125 acacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgt 181  Q
    |||| |||||||||||| ||||||||||||||||||| |||| ||||||||||||||    
T  16630796 acaccgataataatttaagaaaatgacataattcaatttaatcacatgtgtcagtgt 16630852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 198
Target Start/End: Complemental strand, 43586071 - 43585990
Alignment:
Q  117 acacgtcgacacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcggacacggtacgtgtc 198  Q
    ||||||| |||| ||||| | |||  ||||||||||||||||||| |||| ||| ||||| |||||||||||| ||||||||    
T  43586071 acacgtcaacacagataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtc 43585990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 125 - 189
Target Start/End: Original strand, 18570973 - 18571037
Alignment:
Q  125 acacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcggacacg 189  Q
    |||| |||||||||||  ||||||||||||||||||| |||| | |||||||||||||| |||||    
T  18570973 acaccgataataatttgagaaaatgacataattcaatgtaatcatatgtgtcagtgtcgaacacg 18571037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 30298513 - 30298444
Alignment:
Q  117 acacgtcgacacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcggacac 188  Q
    |||||||||||| ||||||||||||  |||||||||||||||| | ||||  |||||||| |||||||||||    
T  30298513 acacgtcgacaccgataataatttaataaaatgacataattcagtgtaat--catgtgtcggtgtcggacac 30298444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 186
Target Start/End: Original strand, 31026690 - 31026757
Alignment:
Q  119 acgtcgacacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcggac 186  Q
    ||||||| || |||||||||||| ||||||||||||||||||| |||| | || |||| |||||||||    
T  31026690 acgtcgagaccgataataatttaagaaaatgacataattcaatgtaatcatatatgtcggtgtcggac 31026757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 124 - 183
Target Start/End: Original strand, 40681982 - 40682041
Alignment:
Q  124 gacacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcg 183  Q
    ||||| |||||||||||  ||||||||||||||||||| ||||| || |||||| |||||    
T  40681982 gacaccgataataatttgagaaaatgacataattcaatgtaattgcacgtgtcaatgtcg 40682041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 188
Target Start/End: Original strand, 23406874 - 23406932
Alignment:
Q  130 gataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcggacac 188  Q
    |||||||||||| |||||| ||||||||||  ||||| | | |||||||||||||||||    
T  23406874 gataataatttaagaaaattacataattcagaataatcataggtgtcagtgtcggacac 23406932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 161
Target Start/End: Original strand, 30563408 - 30563446
Alignment:
Q  123 cgacacggataataatttaggaaaatgacataattcaat 161  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  30563408 cgacacggataataatttgagaaaatgacataattcaat 30563446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 44605191 - 44605141
Alignment:
Q  131 ataataatttaggaaaatgacataattcaatataattacatgtgtcagtgt 181  Q
    ||||||||||  |||||| |||||||||||| |||||||||||||| ||||    
T  44605191 ataataatttgagaaaataacataattcaatgtaattacatgtgtcggtgt 44605141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 168
Target Start/End: Original strand, 4332925 - 4332970
Alignment:
Q  123 cgacacggataataatttaggaaaatgacataattcaatataatta 168  Q
    |||||| ||||||||||| ||||||| |||||||||||| ||||||    
T  4332925 cgacactgataataatttgggaaaatcacataattcaatgtaatta 4332970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 189
Target Start/End: Original strand, 5040754 - 5040799
Alignment:
Q  144 aaaatgacataattcaatataattacatgtgtcagtgtcggacacg 189  Q
    ||||| |||||||||||| |||||||| ||||| ||||||||||||    
T  5040754 aaaatcacataattcaatgtaattacaagtgtcggtgtcggacacg 5040799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 168
Target Start/End: Complemental strand, 12933788 - 12933751
Alignment:
Q  131 ataataatttaggaaaatgacataattcaatataatta 168  Q
    ||||||||||| ||||||||||||||||||| ||||||    
T  12933788 ataataatttaagaaaatgacataattcaatgtaatta 12933751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 189
Target Start/End: Complemental strand, 18256039 - 18255974
Alignment:
Q  124 gacacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcggacacg 189  Q
    ||||| ||||||||||||  ||||| |||||||| ||| |||||| | ||||| ||||||||||||    
T  18256039 gacacagataataatttaaaaaaatcacataatttaatgtaattagaagtgtcggtgtcggacacg 18255974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 186
Target Start/End: Original strand, 37558970 - 37559039
Alignment:
Q  117 acacgtcgacacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcggac 186  Q
    ||||| |||||| | |||||||||   ||||| |||||||||||| |||||||| ||||| |||||||||    
T  37558970 acacgccgacacagctaataatttgtaaaaatcacataattcaatgtaattacaagtgtcggtgtcggac 37559039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 21091722 - 21091786
Alignment:
Q  123 cgacacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcggaca 187  Q
    |||||| | |||||||||| |||||| ||||| |||| | |||||||| ||||||||||| ||||    
T  21091722 cgacaccgctaataatttaagaaaataacatacttcagtgtaattacaagtgtcagtgtcagaca 21091786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000008; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 47775720 - 47775776
Alignment:
Q  119 acgtcgacacggataataatttaggaaaatgacataattcaatataattacatgtgt 175  Q
    |||||||||||||||||||| ||  ||||||| |||||||||| |||||||||||||    
T  47775720 acgtcgacacggataataatctaaaaaaatgatataattcaatgtaattacatgtgt 47775776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 24205107 - 24205037
Alignment:
Q  117 acacgtcgacacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcggacac 188  Q
    ||||| ||||||||||||||||||  |||||||||||||| || | |||||| | ||||| |||||||||||    
T  24205107 acacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtc-gtgtcggacac 24205037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 35222957 - 35223016
Alignment:
Q  143 gaaaatgacataattcaatataattacatgtgtcagtgtcggacacggtacgtgtctgac 202  Q
    |||||| |||||||||||| |||||| ||||||| |||||||||| |  |||||||||||    
T  35222957 gaaaatcacataattcaatgtaattatatgtgtcggtgtcggacatgacacgtgtctgac 35223016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 183
Target Start/End: Complemental strand, 19323510 - 19323448
Alignment:
Q  121 gtcgacacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcg 183  Q
    |||||||| |||| ||||||  ||||||||||||||| ||| |||| |||||||| |||||||    
T  19323510 gtcgacactgatagtaatttgagaaaatgacataattgaatttaatcacatgtgtaagtgtcg 19323448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 1502573 - 1502638
Alignment:
Q  123 cgacacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcggacac 188  Q
    |||||| | ||||||| || ||||||||||||||| ||| |||| ||||||||| |||| ||||||    
T  1502573 cgacactggtaataatctaagaaaatgacataattgaatgtaatcacatgtgtctgtgttggacac 1502638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 183
Target Start/End: Complemental strand, 9210878 - 9210825
Alignment:
Q  130 gataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcg 183  Q
    |||||||||||  |||||||||||||||||||  ||| |||||||||| |||||    
T  9210878 gataataatttgagaaaatgacataattcaatggaatcacatgtgtcaatgtcg 9210825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 49505205 - 49505148
Alignment:
Q  132 taataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcggacacg 189  Q
    |||||||||  |||||| |||||||| | | |||||| ||||||||||||||||||||    
T  49505205 taataatttgagaaaatcacataatttagtgtaattatatgtgtcagtgtcggacacg 49505148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 54441317 - 54441265
Alignment:
Q  131 ataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcg 183  Q
    |||||||||||  |||||||||||||| |||||||| |||| |||| ||||||    
T  54441317 ataataatttattaaaatgacataattaaatataataacatatgtcggtgtcg 54441265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000003; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 125 - 188
Target Start/End: Original strand, 12278836 - 12278898
Alignment:
Q  125 acacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcggacac 188  Q
    |||| |||||||||||| ||||||||||||||||| | |||||| ||||||| |||||||||||    
T  12278836 acactgataataatttaagaaaatgacataattcagtgtaattatatgtgtc-gtgtcggacac 12278898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 2525905 - 2525843
Alignment:
Q  122 tcgacacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcgg 184  Q
    ||||||| |||||||||||  | |||||||||||||||||||||| | ||||||| |||||||    
T  2525905 tcgacaccgataataatttgagcaaatgacataattcaatataatcatatgtgtcggtgtcgg 2525843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 198
Target Start/End: Complemental strand, 5937487 - 5937406
Alignment:
Q  117 acacgtcgacacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcggacacggtacgtgtc 198  Q
    ||||||| |||||||||| | |||  ||||||||||||||||||| |||| ||| ||||| ||||||| |||| ||| ||||    
T  5937487 acacgtcaacacggataaaattttgagaaaatgacataattcaatgtaatcacaagtgtctgtgtcggtcacgatacatgtc 5937406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 189
Target Start/End: Original strand, 26733297 - 26733369
Alignment:
Q  117 acacgtcgacacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcggacacg 189  Q
    |||||||||||| | |||||||||   ||||| |||||||||| | |||||| ||||||| ||||||||||||    
T  26733297 acacgtcgacaccgctaataatttgacaaaatcacataattcagtctaattaaatgtgtcggtgtcggacacg 26733369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 144 - 183
Target Start/End: Complemental strand, 12843214 - 12843175
Alignment:
Q  144 aaaatgacataattcaatataattacatgtgtcagtgtcg 183  Q
    ||||| |||||||||||| |||||||||||||||||||||    
T  12843214 aaaattacataattcaatgtaattacatgtgtcagtgtcg 12843175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 132 - 187
Target Start/End: Original strand, 24146824 - 24146879
Alignment:
Q  132 taataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcggaca 187  Q
    |||||||||  |||||| ||||||||||||||||||| ||||||| ||||| ||||    
T  24146824 taataattttagaaaatcacataattcaatataattatatgtgtcggtgtctgaca 24146879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 198
Target Start/End: Original strand, 25956464 - 25956519
Alignment:
Q  143 gaaaatgacataattcaatataattacatgtgtcagtgtcggacacggtacgtgtc 198  Q
    ||||||||||||||||||| |||| ||| ||||| |||||||||||| ||| ||||    
T  25956464 gaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacatgtc 25956519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 124 - 183
Target Start/End: Complemental strand, 35238243 - 35238184
Alignment:
Q  124 gacacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcg 183  Q
    ||||| ||||||| |||  |||||||||||||||||||||||| ||| |||| |||||||    
T  35238243 gacaccgataatattttgagaaaatgacataattcaatataatcacacgtgttagtgtcg 35238184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 3721101 - 3721158
Alignment:
Q  132 taataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcggacacg 189  Q
    |||||||||  |||||| |||||||| | |||||||| ||||||| ||||||||||||    
T  3721101 taataatttgagaaaatcacataatttagtataattatatgtgtcggtgtcggacacg 3721158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 188
Target Start/End: Original strand, 4909158 - 4909215
Alignment:
Q  131 ataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcggacac 188  Q
    ||||||||||  |||||| |||||||||| | |||| | |||||||||||||||||||    
T  4909158 ataataatttgagaaaattacataattcattgtaatcatatgtgtcagtgtcggacac 4909215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 21880160 - 21880217
Alignment:
Q  132 taataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcggacacg 189  Q
    |||||||||  |||||| |||||||||| | |||||||| ||||| ||||||||||||    
T  21880160 taataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtcggacacg 21880217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 175
Target Start/End: Complemental strand, 44172943 - 44172898
Alignment:
Q  130 gataataatttaggaaaatgacataattcaatataattacatgtgt 175  Q
    |||||||||||  ||||||||||||||||||| |||| ||||||||    
T  44172943 gataataatttgagaaaatgacataattcaatgtaatcacatgtgt 44172898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 38134465 - 38134413
Alignment:
Q  124 gacacggataataatttaggaaaatgacataattcaatataattacatgtgtc 176  Q
    ||||| |||||||||||  ||||||||||||||||||| |||| | |||||||    
T  38134465 gacaccgataataatttgagaaaatgacataattcaatgtaatcatatgtgtc 38134413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000001; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 202
Target Start/End: Original strand, 3025559 - 3025629
Alignment:
Q  132 taataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcggacacggtacgtgtctgac 202  Q
    |||||||||  |||||| |||||||||| | |||||| | ||||||||||||||||||  |||||||||||    
T  3025559 taataatttgagaaaatcacataattcagtgtaattataggtgtcagtgtcggacacgacacgtgtctgac 3025629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 175
Target Start/End: Original strand, 9936807 - 9936865
Alignment:
Q  117 acacgtcgacacggataataatttaggaaaatgacataattcaatataattacatgtgt 175  Q
    |||||||||||  |||||||||||| |||||||| ||||||||||||||| | ||||||    
T  9936807 acacgtcgacatcgataataatttaagaaaatgatataattcaatataatcatatgtgt 9936865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 189
Target Start/End: Complemental strand, 31236643 - 31236571
Alignment:
Q  117 acacgtcgacacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcggacacg 189  Q
    ||||| |||||| | |||||||||  |||||| |||||||||||| |||||| ||||||| ||| ||||||||    
T  31236643 acacgccgacactgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgacggacacg 31236571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 188
Target Start/End: Original strand, 34897078 - 34897149
Alignment:
Q  117 acacgtcgacacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcggacac 188  Q
    |||||||||||| | |||||||||  |||||| |||||||||| | |||||| |||||||  ||||||||||    
T  34897078 acacgtcgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcggacac 34897149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 188
Target Start/End: Original strand, 42874515 - 42874586
Alignment:
Q  117 acacgtcgacacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcggacac 188  Q
    |||||||||||| | ||| | |||  ||||||||||||||||||| |||| ||| |||||||||| ||||||    
T  42874515 acacgtcgacaccgttaacattttgagaaaatgacataattcaatgtaatcacaagtgtcagtgttggacac 42874586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 183
Target Start/End: Original strand, 22651969 - 22652035
Alignment:
Q  117 acacgtcgacacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcg 183  Q
    ||||| |||||| | |||||||||   ||||| ||||||||||||||||||||| ||||| ||||||    
T  22651969 acacgccgacacagctaataatttgaaaaaatcacataattcaatataattacaagtgtcggtgtcg 22652035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 175
Target Start/End: Original strand, 27547988 - 27548046
Alignment:
Q  117 acacgtcgacacggataataatttaggaaaatgacataattcaatataattacatgtgt 175  Q
    |||||||||||| || ||| ||||  ||||||||||||| |||||||||| ||||||||    
T  27547988 acacgtcgacaccgaaaatgattttagaaaatgacataagtcaatataatcacatgtgt 27548046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 30068087 - 30068045
Alignment:
Q  124 gacacggataataatttaggaaaatgacataattcaatataat 166  Q
    |||||||||||||||||  ||||||||||||||||| ||||||    
T  30068087 gacacggataataatttgagaaaatgacataattcagtataat 30068045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 181
Target Start/End: Original strand, 32691754 - 32691800
Alignment:
Q  135 taatttaggaaaatgacataattcaatataattacatgtgtcagtgt 181  Q
    ||||||| ||||||||||||||| ||| |||| ||||||||||||||    
T  32691754 taatttaagaaaatgacataattgaatgtaatcacatgtgtcagtgt 32691800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 166
Target Start/End: Complemental strand, 16869773 - 16869732
Alignment:
Q  125 acacggataataatttaggaaaatgacataattcaatataat 166  Q
    ||||||| ||||||||| ||||||||||||||||| ||||||    
T  16869773 acacggaaaataatttaagaaaatgacataattcactataat 16869732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 198
Target Start/End: Original strand, 20873062 - 20873143
Alignment:
Q  117 acacgtcgacacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcggacacggtacgtgtc 198  Q
    ||||| |||||  |||||||||||   ||||| |||||||| | | |||||||| ||||| |||||||||||| ||||||||    
T  20873062 acacgccgacatagataataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacgatacgtgtc 20873143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 33382077 - 33382020
Alignment:
Q  125 acacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtc 182  Q
    |||| |||||||||||| |||||||||||||||||   |||||| ||||||| |||||    
T  33382077 acaccgataataatttaagaaaatgacataattcagagtaattatatgtgtcggtgtc 33382020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 161
Target Start/End: Original strand, 5307054 - 5307097
Alignment:
Q  117 acacgtcgacacggataataatttaggaaaatgacataattcaat 161  Q
    |||||||||||| ||||||||||| | ||||||||||||||||||    
T  5307054 acacgtcgacactgataataattt-gaaaaatgacataattcaat 5307097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 8798882 - 8798838
Alignment:
Q  132 taataatttaggaaaatgacataattcaatataattacatgtgtc 176  Q
    |||||||||  |||||| ||||||||||||||||||| |||||||    
T  8798882 taataatttgagaaaataacataattcaatataattatatgtgtc 8798838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 122 - 182
Target Start/End: Complemental strand, 31548354 - 31548294
Alignment:
Q  122 tcgacacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtc 182  Q
    ||||||| |||||| ||||   |||||||||||||||||| |||| ||||||||| |||||    
T  31548354 tcgacaccgataattatttgataaaatgacataattcaatgtaatcacatgtgtcggtgtc 31548294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000001; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 9024242 - 9024176
Alignment:
Q  117 acacgtcgacacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcg 183  Q
    ||||||||||||  || |||||||  ||||||||||||||||||| |||| | ||||||||||||||    
T  9024242 acacgtcgacacaaatgataatttgagaaaatgacataattcaatgtaatcatatgtgtcagtgtcg 9024176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 146 - 183
Target Start/End: Original strand, 602664 - 602701
Alignment:
Q  146 aatgacataattcaatataattacatgtgtcagtgtcg 183  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  602664 aatgacataattcaatataatcacatgtgtcagtgtcg 602701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 124 - 189
Target Start/End: Original strand, 28715295 - 28715360
Alignment:
Q  124 gacacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcggacacg 189  Q
    ||||||| |||||||||   |||||||||||||||| | |||||||| ||||| ||||||||||||    
T  28715295 gacacggctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtcggacacg 28715360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 202
Target Start/End: Complemental strand, 33001355 - 33001270
Alignment:
Q  117 acacgtcgacacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcggacacggtacgtgtctgac 202  Q
    ||||| |||||| | |||||||||   ||||| |||||||| ||| |||||| ||||||| ||||||||||||  |||||||||||    
T  33001355 acacgccgacactgctaataatttgaaaaaatcacataattaaatgtaattatatgtgtcggtgtcggacacgacacgtgtctgac 33001270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 189
Target Start/End: Original strand, 19040345 - 19040417
Alignment:
Q  117 acacgtcgacacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcggacacg 189  Q
    ||||| |||||| | |||||||||  |||||| |||||||||| | |||||| ||||||| ||||||||||||    
T  19040345 acacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtctgtgtcggacacg 19040417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 168
Target Start/End: Original strand, 7625115 - 7625166
Alignment:
Q  117 acacgtcgacacggataataatttaggaaaatgacataattcaatataatta 168  Q
    ||||||||||||||||||||||||  |||||||| |||||| | ||||||||    
T  7625115 acacgtcgacacggataataatttgagaaaatgatataatttagtataatta 7625166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 34867927 - 34867856
Alignment:
Q  117 acacgtcgacacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcggacac 188  Q
    ||||||||||||  | |||  ||| ||||||||| || |||||||||||| |||||||||||||| ||||||    
T  34867927 acacgtcgacaccaagaatggtttgggaaaatgaaatcattcaatataatcacatgtgtcagtgttggacac 34867856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 189
Target Start/End: Original strand, 7377998 - 7378044
Alignment:
Q  143 gaaaatgacataattcaatataattacatgtgtcagtgtcggacacg 189  Q
    |||||| |||||||||||| |||||| ||||||| ||||||||||||    
T  7377998 gaaaatcacataattcaatgtaattatatgtgtcggtgtcggacacg 7378044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 159
Target Start/End: Complemental strand, 12086411 - 12086369
Alignment:
Q  117 acacgtcgacacggataataatttaggaaaatgacataattca 159  Q
    ||||||||||||||||||||||||  || ||||||||||||||    
T  12086411 acacgtcgacacggataataatttgagataatgacataattca 12086369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 183
Target Start/End: Original strand, 19369810 - 19369876
Alignment:
Q  117 acacgtcgacacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcg 183  Q
    |||||| ||||||||||| | |||  ||||||||||||||||||| |||| ||| ||||| ||||||    
T  19369810 acacgttgacacggataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 19369876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 200
Target Start/End: Original strand, 30851601 - 30851676
Alignment:
Q  123 cgacacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcggacacggtacgtgtctg 200  Q
    |||||| | |||||||||| |||||| |||  ||||||| |||||| ||||||| ||||||||||||  |||||||||    
T  30851601 cgacactgctaataatttaagaaaatcaca--attcaatgtaattatatgtgtcggtgtcggacacgacacgtgtctg 30851676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 34595154 - 34595212
Alignment:
Q  144 aaaatgacataattcaatataattacatgtgtcagtgtcggacacggtacgtgtctgac 202  Q
    ||||| |||||||||| | |||||||| ||||| ||||||||||||  |||||||||||    
T  34595154 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtctgac 34595212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 4859175 - 4859114
Alignment:
Q  121 gtcgacacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtc 182  Q
    ||||||||  ||||||||||  |||||||||||||| |||| |||| ||| |||||||||||    
T  4859175 gtcgacaccaataataatttgagaaaatgacataatccaatgtaatcacacgtgtcagtgtc 4859114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 202
Target Start/End: Original strand, 9658872 - 9658957
Alignment:
Q  117 acacgtcgacacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcggacacggtacgtgtctgac 202  Q
    ||||| |||||| | |||||||||| |||||| |||||||||| | |||||| || |||| ||||  ||||||  |||||||||||    
T  9658872 acacgccgacaccgctaataatttaagaaaatcacataattcagtgtaattatatttgtcggtgttagacacgacacgtgtctgac 9658957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 166
Target Start/End: Complemental strand, 12627882 - 12627833
Alignment:
Q  117 acacgtcgacacggataataatttaggaaaatgacataattcaatataat 166  Q
    ||||||||||||||||| ||||||| |||||| ||||| |||||| ||||    
T  12627882 acacgtcgacacggatactaatttaagaaaataacatatttcaatgtaat 12627833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 166
Target Start/End: Complemental strand, 13211347 - 13211298
Alignment:
Q  117 acacgtcgacacggataataatttaggaaaatgacataattcaatataat 166  Q
    |||||||||||  |||||||||||  ||||||||||||||| ||||||||    
T  13211347 acacgtcgacattgataataatttgagaaaatgacataatttaatataat 13211298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 175
Target Start/End: Original strand, 32728365 - 32728418
Alignment:
Q  122 tcgacacggataataatttaggaaaatgacataattcaatataattacatgtgt 175  Q
    ||||||| |||||||| ||| |||||||||||||||| || ||| |||||||||    
T  32728365 tcgacaccgataataaattaagaaaatgacataattctatgtaaatacatgtgt 32728418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 189
Target Start/End: Complemental strand, 426580 - 426508
Alignment:
Q  117 acacgtcgacacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcggacacg 189  Q
    ||||| |||||| | |||||||||   ||||| |||||||| ||| |||||||| ||||| ||||||||||||    
T  426580 acacgccgacacagttaataatttgaaaaaatcacataattaaatgtaattacaagtgtcggtgtcggacacg 426508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 6751922 - 6751878
Alignment:
Q  143 gaaaatgacataattcaatataattacatgtgtcagtgtcggaca 187  Q
    ||||||||||||||||||| |||| ||| ||||| ||||||||||    
T  6751922 gaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 6751878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 188
Target Start/End: Complemental strand, 7265644 - 7265588
Alignment:
Q  132 taataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcggacac 188  Q
    |||||||||  |||||| |||||||||| | |||||| ||||||| |||||||||||    
T  7265644 taataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcggacac 7265588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.0000000001; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 159
Target Start/End: Complemental strand, 34515940 - 34515898
Alignment:
Q  117 acacgtcgacacggataataatttaggaaaatgacataattca 159  Q
    ||||||||||||||||||||||| | |||||||||||||||||    
T  34515940 acacgtcgacacggataataattcaagaaaatgacataattca 34515898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 11135334 - 11135289
Alignment:
Q  143 gaaaatgacataattcaatataattacatgtgtcagtgtcggacac 188  Q
    |||||| |||||||||||||||||||||||||||| |||| |||||    
T  11135334 gaaaattacataattcaatataattacatgtgtcactgtcagacac 11135289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 124 - 181
Target Start/End: Complemental strand, 18513300 - 18513243
Alignment:
Q  124 gacacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgt 181  Q
    ||||| |||||||||||  ||||||||||||||||||| |||| | ||||||||||||    
T  18513300 gacaccgataataatttgagaaaatgacataattcaatgtaatcatatgtgtcagtgt 18513243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 198
Target Start/End: Complemental strand, 23293052 - 23292971
Alignment:
Q  117 acacgtcgacacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcggacacggtacgtgtc 198  Q
    ||||| |||||| | |||||||||   ||||| |||||||||| |||||||||| ||||| ||||||||||||  |||||||    
T  23293052 acacgccgacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcggacacgacacgtgtc 23292971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 12797377 - 12797319
Alignment:
Q  144 aaaatgacataattcaatataattacatgtgtcagtgtcggacacggtacgtgtctgac 202  Q
    ||||| |||||||||| | |||||||| ||||| |||||||||||| ||| ||||||||    
T  12797377 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgatacatgtctgac 12797319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 159
Target Start/End: Complemental strand, 20743344 - 20743302
Alignment:
Q  117 acacgtcgacacggataataatttaggaaaatgacataattca 159  Q
    ||||| ||||||||||||||||||  |||||||||||||||||    
T  20743344 acacgccgacacggataataatttgagaaaatgacataattca 20743302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 176
Target Start/End: Original strand, 23915127 - 23915181
Alignment:
Q  122 tcgacacggataataatttaggaaaatgacataattcaatataattacatgtgtc 176  Q
    |||||||  ||||| ||||  |||||| |||||||||||||||||||||||||||    
T  23915127 tcgacaccaataatcatttgagaaaataacataattcaatataattacatgtgtc 23915181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 166
Target Start/End: Complemental strand, 5654653 - 5654608
Alignment:
Q  121 gtcgacacggataataatttaggaaaatgacataattcaatataat 166  Q
    |||||||| |||||||||||  ||||||||||||||||||| ||||    
T  5654653 gtcgacactgataataatttgagaaaatgacataattcaatgtaat 5654608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 168
Target Start/End: Original strand, 32910550 - 32910595
Alignment:
Q  123 cgacacggataataatttaggaaaatgacataattcaatataatta 168  Q
    ||||||||||||||||||  ||||||||||||||||| | ||||||    
T  32910550 cgacacggataataatttgagaaaatgacataattcagtgtaatta 32910595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 14465353 - 14465301
Alignment:
Q  124 gacacggataataatttaggaaaatgacataattcaatataattacatgtgtc 176  Q
    ||||| |||||||||||  ||||||||||||||||||| |||| | |||||||    
T  14465353 gacaccgataataatttgagaaaatgacataattcaatttaatcatatgtgtc 14465301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 21945502 - 21945566
Alignment:
Q  123 cgacacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcggaca 187  Q
    |||||| | |||||||||   |||||||||||||||| | |||||||| ||||| ||||||||||    
T  21945502 cgacacagctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtcggaca 21945566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 183
Target Start/End: Complemental strand, 22799933 - 22799893
Alignment:
Q  143 gaaaatgacataattcaatataattacatgtgtcagtgtcg 183  Q
    ||||||||||||||||||| |||| ||| ||||||||||||    
T  22799933 gaaaatgacataattcaatgtaatcacacgtgtcagtgtcg 22799893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 183
Target Start/End: Complemental strand, 3909 - 3849
Alignment:
Q  123 cgacacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcg 183  Q
    |||||||| ||||||||||  ||||| |||||||||| | |||||||| ||||||||||||    
T  3909 cgacacggttaataatttaaaaaaatcacataattcagtgtaattacaagtgtcagtgtcg 3849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 159
Target Start/End: Complemental strand, 8119 - 8077
Alignment:
Q  117 acacgtcgacacggataataatttaggaaaatgacataattca 159  Q
    ||||||||| ||||||||||||||  |||||||||||||||||    
T  8119 acacgtcgatacggataataatttgagaaaatgacataattca 8077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 183
Target Start/End: Original strand, 8659 - 8725
Alignment:
Q  117 acacgtcgacacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgtcg 183  Q
    ||||||||||||   ||||||||||||||||| ||||| |||| |||||||| | ||||| ||||||    
T  8659 acacgtcgacacttctaataatttaggaaaatcacatagttcagtataattataagtgtcggtgtcg 8725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 175
Target Start/End: Original strand, 99890 - 99944
Alignment:
Q  121 gtcgacacggataataatttaggaaaatgacataattcaatataattacatgtgt 175  Q
    |||||||| |||||||||||  |||||| |||||||||||| |||||| ||||||    
T  99890 gtcgacaccgataataattttagaaaataacataattcaatgtaattatatgtgt 99944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 181
Target Start/End: Original strand, 28843 - 28907
Alignment:
Q  117 acacgtcgacacggataataatttaggaaaatgacataattcaatataattacatgtgtcagtgt 181  Q
    ||||| |||||| | |||||||||| ||||||  ||||||||||| |||||| ||||||| ||||    
T  28843 acacgccgacaccgttaataatttaagaaaatcgcataattcaatgtaattatatgtgtcggtgt 28907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 202
Target Start/End: Complemental strand, 45563 - 45511
Alignment:
Q  150 acataattcaatataattacatgtgtcagtgtcggacacggtacgtgtctgac 202  Q
    |||||||||| | |||||||| ||||| ||||||||||||  |||||||||||    
T  45563 acataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtctgac 45511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University