View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5725-Insertion-14 (Length: 115)
Name: NF5725-Insertion-14
Description: NF5725
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5725-Insertion-14 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 92; Significance: 4e-45; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 92; E-Value: 4e-45
Query Start/End: Original strand, 7 - 115
Target Start/End: Original strand, 2413774 - 2413878
Alignment:
| Q |
7 |
aattacatatactaacttaaaaatttagcttcctctctagtatttcttgtgtttaggcaggcagcatgtttcgcctgccaggctttcaagttgttttttc |
106 |
Q |
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| T |
2413774 |
aattacatatactaacttaaaaatttagcttcctctctagtatttcttgtgttt----aggcagcatgtttcgcctgccaggctttcaagttgttttttc |
2413869 |
T |
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| Q |
107 |
tctcgcgtt |
115 |
Q |
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||||||||| |
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| T |
2413870 |
tctcgcgtt |
2413878 |
T |
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