View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5725_high_24 (Length: 291)
Name: NF5725_high_24
Description: NF5725
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5725_high_24 |
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Alignment Details
Target: chr3 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 34678602 - 34678341
Alignment:
| Q |
1 |
tattttcacgcaccaaatccaatagtgttggacgtgtttgaagatatgtttaagtgggagcaattctcaccttacaaaccttataacctaatattgtgag |
100 |
Q |
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| T |
34678602 |
tattttcacgcaccaaatccagtagtgttggacgtgtttgaagatatgtttaagtgggagcaattcttaccttacaaaccttataaccaaatattgtgag |
34678503 |
T |
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| Q |
101 |
attaccttaagcttaaccataaattctaagagaatataagtctaatttctttgtcaattggaccaacatctcattcgtgaggacgagtaatataacaaat |
200 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
34678502 |
attaccttaagcctaaccataaattctaagagaatataagtctaatttctttatcaattggaccaacatctcattcgtgaggacgagtaatataacaact |
34678403 |
T |
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| Q |
201 |
tctcttatcgaaaacatcaccggtcactacttttacattttaaaattattttcaaatattga |
262 |
Q |
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||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
34678402 |
tctcttatcagaaacatcaccagtcactacttttacattttaaaattattttcaaatattga |
34678341 |
T |
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