View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5726_low_22 (Length: 258)
Name: NF5726_low_22
Description: NF5726
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5726_low_22 |
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Alignment Details
Target: chr2 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 10 - 241
Target Start/End: Original strand, 44739363 - 44739594
Alignment:
| Q |
10 |
agaagaagaatatgaggatgaaattgattagacgttgtaattgtgtcacgtagttactcgtgttagccatccaatttaaaatcaacagctgagattgtta |
109 |
Q |
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| T |
44739363 |
agaagaagaatatgaggatgaaattgattagacgttgtaattgtgtcacgtagttactcgtgttagccatccaatttaaaatcaacagctgagattgtta |
44739462 |
T |
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| Q |
110 |
gcatgtaaatatgaaccgtctgatttactagtagtagttagtgcatacttatggtgtacaaaagcattttccttattttaatttgtgcatataagtagca |
209 |
Q |
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| T |
44739463 |
gcatgtaaatatgaaccgtctgatttactagtagtagttagtgcatacttatggtgtacaaaagcattttccttattttaatttgtgcatataagtagcg |
44739562 |
T |
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| Q |
210 |
atagcagcgtgctttacatagacgtaagcact |
241 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
44739563 |
gtagcagcgtgctttacatagacgtaagcact |
44739594 |
T |
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