View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5727_high_7 (Length: 255)
Name: NF5727_high_7
Description: NF5727
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5727_high_7 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 19 - 255
Target Start/End: Complemental strand, 35552091 - 35551855
Alignment:
| Q |
19 |
agatggagagacataaattaattcaaaccacaataaatgtgatgcaatacaacaggaaaatggccaacaaaagtagtagaatttcaatcagggaaataga |
118 |
Q |
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| T |
35552091 |
agatggagagacataaattaattcaaaccacaataaatgtgatgcaatacaacaggaaaatggccaacaaaagtagtagaatttcaatcagggaaataga |
35551992 |
T |
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| Q |
119 |
atacagaaggtccgaatttgtttcatagaatgaattaagcattggaaataatgcctaatcatactaaggttaatgtgttatgaataattaaatataacca |
218 |
Q |
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| T |
35551991 |
atacagaaggtccgaatttgtttcatagaatgaattaagcattggaaataatgcctaatcatactaaggttaatgtgttatgaataattgaatataacca |
35551892 |
T |
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| Q |
219 |
caaactccgacattaggataacaacctgcattggtaa |
255 |
Q |
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| T |
35551891 |
caaactccgacattaggataacaacctgcattggtaa |
35551855 |
T |
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