View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5728-Insertion-6 (Length: 510)

Name: NF5728-Insertion-6
Description: NF5728
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5728-Insertion-6
NF5728-Insertion-6
[»] chr6 (1 HSPs)
chr6 (8-510)||(26210044-26210545)


Alignment Details
Target: chr6 (Bit Score: 451; Significance: 0; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 451; E-Value: 0
Query Start/End: Original strand, 8 - 510
Target Start/End: Original strand, 26210044 - 26210545
Alignment:
Q  8 ggatcaagtaagataagggcaactttgtccaagtgagtaggaaccaagcactacatggcaaagggatacactcaaaattgaataaataatgttagcttgt 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26210044 ggatcaagtaagataagggcaactttgtccaagtgagtaggaaccaagcactacatggcaaagggatacactcaaaattgaataaataatgttagcttgt 26210143  T
Q  108 ttgactattttaatttatcttgattattaataatatgttgttaaattgatgacatattttgagactaacagataattaatatgatttcttggcaaatgga 207  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26210144 ttgactattttagtttatcttgattattaataatatgttgttaaattgatgacatattttgagactaacagataattaatatgatttcttggcaaatgga 26210243  T
Q  208 ttgaattaactggctaagctccaagccttgttctatcaatacaaatcttatttatttgaaatagtgtaattaggatgacatgattaaacttttaaaacta 307  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  26210244 ttgaattaaccggctaagctccaagccttgttctatcaatacaaatcttatttatttgaaatagtgtaattaggatgacatgatcaaacttttaaaacta 26210343  T
Q  308 tatatgatatgatatttttagccataaaactacatttgatgacaaaaagaaaactgtaggaactcatataagtaaactaaagcctataccaaattatcta 407  Q
    ||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  26210344 tatatgatatgattttattagccataaaactacatttgatgacaagaagaaaactgtaggaactcata-aataaaactaaagcctataccaaattatcta 26210442  T
Q  408 cttcatccgtctttaattataagattctttaacattcttgtacacatatttaaaaaataaagtaatgtaattagcgagtataatttgtatataccacctc 507  Q
    || ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26210443 ctccatccgtctttaattataatattctttaacattcttttacacatatttaaaaaataaagtaatgtaattagcgagtataatttgtatataccacctc 26210542  T
Q  508 tgt 510  Q
    |||    
T  26210543 tgt 26210545  T

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