View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5728_low_8 (Length: 245)
Name: NF5728_low_8
Description: NF5728
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5728_low_8 |
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Alignment Details
Target: chr6 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 26209822 - 26210048
Alignment:
| Q |
1 |
acacacaaccttagccacacttactacactacttgaagtgacgtacctttcctttccatattcctcaagacacaaacgtccatatacgtgatgctcattt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26209822 |
acacacaaccttagccacacttactacactacttgaagtgacgtacctttcctttccatattcctcaagacacaaacgtccatatacgtgatgctcattt |
26209921 |
T |
|
| Q |
101 |
agttaaaggccccacaatttttaaggctttgaagggttctactatataatatctcaatcttctagtatctgattttgtgccataactttatattttgtcc |
200 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26209922 |
agttaaagaccccacaatttttaaggctttgaagggttctactatataatatctcaatcttctagtatctgattttgtgccataactttatattttgtcc |
26210021 |
T |
|
| Q |
201 |
atagaagcttagcatgtgatggggatc |
227 |
Q |
| |
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||||||||||||||||||||||||||| |
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| T |
26210022 |
atagaagcttagcatgtgatggggatc |
26210048 |
T |
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